Citrus Sinensis ID: 043316
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1031 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VZG8 | 1045 | Probable LRR receptor-lik | yes | no | 0.967 | 0.954 | 0.445 | 0.0 | |
| Q9LP24 | 1120 | Probable leucine-rich rep | no | no | 0.900 | 0.828 | 0.444 | 0.0 | |
| Q9LVP0 | 1102 | Probable leucine-rich rep | no | no | 0.949 | 0.888 | 0.357 | 1e-162 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.972 | 0.910 | 0.350 | 1e-161 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.947 | 0.782 | 0.324 | 1e-147 | |
| O49318 | 1124 | Probable leucine-rich rep | no | no | 0.963 | 0.883 | 0.341 | 1e-147 | |
| Q9LHP4 | 1141 | Receptor-like protein kin | no | no | 0.888 | 0.802 | 0.360 | 1e-147 | |
| C0LGV1 | 1135 | LRR receptor-like serine/ | no | no | 0.939 | 0.853 | 0.343 | 1e-147 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.918 | 0.756 | 0.338 | 1e-140 | |
| Q9FZ59 | 1088 | Leucine-rich repeat recep | no | no | 0.923 | 0.875 | 0.329 | 1e-138 |
| >sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/1025 (44%), Positives = 653/1025 (63%), Gaps = 28/1025 (2%)
Query: 8 ILILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCT- 66
+LI+ ++L+ S+ VS+ + +E+ ALL WK++ NQ +SS LSSW N S CT
Sbjct: 31 LLIISIVLSCSFAVSA-TVEEANALLKWKSTFTNQT-SSSKLSSW----VNPNTSSFCTS 84
Query: 67 WFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSK 126
W+G+ C+L G +I ++L++ G+ GTF+DF FSS P+L +++LS N G I P SK
Sbjct: 85 WYGVACSL-GSIIRLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSK 143
Query: 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFS 186
L DL NQL G IP E+G L+ L L+ N L+GSIP EIG+L+ + + + N +
Sbjct: 144 LEYFDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLT 203
Query: 187 GRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSN 246
G IP S GNL+ L LYL NSL GSIP+ +GNL +L L L +N L G IP S NL N
Sbjct: 204 GPIPSSFGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKN 263
Query: 247 LGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
+ +L +++N L G IP IGN+ +L L L N+L G IP + N+ +L ++ L+ N L+
Sbjct: 264 VTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLN 323
Query: 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS 366
GSIPP G +E++ +L + N+L G +P S G L++L L+L DN G +P I
Sbjct: 324 GSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTE 383
Query: 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLF 426
L+ L+L N+ +G +P +I KL + + +NH G +PKS R+ SL R+RF N+
Sbjct: 384 LTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFS 443
Query: 427 GKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK 486
G + EAFG +P L F+DLS NN +G++S NW KL F S N+I G+IPPEI + ++
Sbjct: 444 GDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQ 503
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
L LDLSSN I G++P + ++KL LN N+LSG +P LT L+YLDLS+N+ S
Sbjct: 504 LSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFS 563
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMES 606
S IP ++ NL +L+Y+NLS N + IP KL L LDLS+N L GEI Q ++++
Sbjct: 564 SEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQN 623
Query: 607 LEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDG---LMEGNKGLC 663
LE L+LSHNNL IP F++M +L+ +D+++N LQGPIP++ AF++ EGNK LC
Sbjct: 624 LERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLC 683
Query: 664 GNF---KALPSCDAFMSHEQTSRKKWVV-IVFPILGMVVLLIGLFGFFLFFGQRKRDSQE 719
G+ + L C S + + ++ I+ PI+G +++L G F+ F +R + +E
Sbjct: 684 GSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEE 743
Query: 720 KRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAE 779
+ G + S+ +F+GK Y+EIIKA +F KY IG G G VYKA+
Sbjct: 744 HTDSESGGETL----------SIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAK 793
Query: 780 LPSGIIFAVKKFN--SQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837
LP+ I+ AVKK N + + + EFLNE+ ALTEIRHRN++K GFCS+ +++F+V
Sbjct: 794 LPNAIM-AVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLV 852
Query: 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897
EY++RGSL +L++D AK+ W +R+NV+KGVA+ALSY+HHD P IVH DISS N+L
Sbjct: 853 YEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNIL 912
Query: 898 LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALE 957
L ++EA +SDFG AK L P SSNW+A AGT+GY APE+A+ M+ TEK DV+SFGVL LE
Sbjct: 913 LGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLE 972
Query: 958 VIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPE 1017
VIKG HP D VST SS + + DHRLP P+ ++ ++++ I++VA+LCL P+
Sbjct: 973 VIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLCLHSDPQ 1032
Query: 1018 ARPTM 1022
ARPTM
Sbjct: 1033 ARPTM 1037
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/954 (44%), Positives = 591/954 (61%), Gaps = 26/954 (2%)
Query: 78 VISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQL 137
+ ++LS L G+ S + +LM L L N L G IPP++ N+ + L L N+L
Sbjct: 176 MTDLALSQNKLTGSIPS-SLGNLKNLMVLYLYENYLTGVIPPELGNMESMTDLALSQNKL 234
Query: 138 SGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLS 197
+G IP +G+L L +LY N+L G IP EIG + + L L N +G IP SLGNL
Sbjct: 235 TGSIPSTLGNLKNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKLTGSIPSSLGNLK 294
Query: 198 NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257
NL L L N L G IP +GN+ S+ L+LS N+L GSIP SL NL NL ILYLY+N L
Sbjct: 295 NLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYL 354
Query: 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLE 317
G IP +GN++S+ +L L+ N+L GSIP SF NL +LT + L+ N L+G IP GN+E
Sbjct: 355 TGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTYLYLYLNYLTGVIPQELGNME 414
Query: 318 ALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL 377
++ L L N+L G +P S GN + L +LYL N G +P + L+ L L N+
Sbjct: 415 SMINLDLSQNKLTGSVPDSFGNFTKLESLYLRVNHLSGAIPPGVANSSHLTTLILDTNNF 474
Query: 378 SGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHP 437
+G P ++ KL +++ NHL G IPKS R+ SL R RF N G ++EAFG +P
Sbjct: 475 TGFFPETVCKGRKLQNISLDYNHLEGPIPKSLRDCKSLIRARFLGNKFTGDIFEAFGIYP 534
Query: 438 NLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI 497
+L F+D S N +GEIS NW PKLG S NNI G+IP EI + ++L LDLS+N++
Sbjct: 535 DLNFIDFSHNKFHGEISSNWEKSPKLGALIMSNNNITGAIPTEIWNMTQLVELDLSTNNL 594
Query: 498 VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLS 557
G++P L +L++L LN NQLSG VP LT L+ LDLS+N SS IP++ +
Sbjct: 595 FGELPEAIGNLTNLSRLRLNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFL 654
Query: 558 KLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNL 617
KLH +NLS N+F+ IP KL L++LDLSHN L GEIP Q+ +++SL++L+LSHNNL
Sbjct: 655 KLHDMNLSRNKFDGSIP-RLSKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNL 713
Query: 618 FDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGL---MEGNKGLCGNF--KALPSC 672
LIP FE M +L+ +DI+ N+L+GP+P++ F+ +E N GLC N + L C
Sbjct: 714 SGLIPTTFEGMIALTNVDISNNKLEGPLPDTPTFRKATADALEENIGLCSNIPKQRLKPC 773
Query: 673 DAFMSHEQTSRKKWVVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKRRTFFGPKATDD 732
+ + + V I+ PILG++V+L F + RKR Q R T P+ ++
Sbjct: 774 RE-LKKPKKNGNLVVWILVPILGVLVILSICANTFTYC-IRKRKLQNGRNT--DPETGEN 829
Query: 733 FGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFN 792
S+ + +GKF Y++II++ ++F + IG G VY+A L II AVK+ +
Sbjct: 830 M-------SIFSVDGKFKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQDTII-AVKRLH 881
Query: 793 SQLLFDEMAD----QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTT 848
+ DE + EFLNEV ALTEIRHRN++K GFCS+ +H+F++ EY+++GSL
Sbjct: 882 DTI--DEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNK 939
Query: 849 ILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908
+L +D AK W +R+NV+KGVA+ALSY+HHD + PIVH DISS N+LLD+++ A +SD
Sbjct: 940 LLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISD 999
Query: 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYV 968
FG AK L SSNW+A AGT+GY APE A+ M+ TEK DV+SFGVL LE+I G HP D V
Sbjct: 1000 FGTAKLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLV 1059
Query: 969 STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTM 1022
S+ SS + D R+ P +KL+ ++E+A+LCL +PE+RPTM
Sbjct: 1060 SS-LSSSPGEALSLRSISDERVLEPRGQNREKLLKMVEMALLCLQANPESRPTM 1112
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 573 bits (1478), Expect = e-162, Method: Compositional matrix adjust.
Identities = 385/1076 (35%), Positives = 550/1076 (51%), Gaps = 97/1076 (9%)
Query: 28 ESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVG---RVISISLS 84
E LL K+ + N L +W N+ PC W G+ C+ V+S++LS
Sbjct: 30 EGQYLLEIKSKFVDAKQN---LRNW-----NSNDSVPCGWTGVMCSNYSSDPEVLSLNLS 81
Query: 85 SLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQE 144
S+ L+G S HL L+LS N L G IP +I N S L L L NNQ G IP E
Sbjct: 82 SMVLSGKLSP-SIGGLVHLKQLDLSYNGLSGKIPKEIGNCSSLEILKLNNNQFDGEIPVE 140
Query: 145 IGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204
IG L L L N + GS+P+EIG L ++ L NN SG++P S+GNL L
Sbjct: 141 IGKLVSLENLIIYNNRISGSLPVEIGNLLSLSQLVTYSNNISGQLPRSIGNLKRLTSFRA 200
Query: 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS---------------------------- 236
N + GS+P+ +G SL +L L+QNQL G
Sbjct: 201 GQNMISGSLPSEIGGCESLVMLGLAQNQLSGELPKEIGMLKKLSQVILWENEFSGFIPRE 260
Query: 237 --------------------IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276
IP L +L +L LYLY+N L G IP IGNL E+D
Sbjct: 261 ISNCTSLETLALYKNQLVGPIPKELGDLQSLEFLYLYRNGLNGTIPREIGNLSYAIEIDF 320
Query: 277 SENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336
SEN L G IPL N+ L L+ LF N L+G+IP L+ LS+L L IN L G IP
Sbjct: 321 SENALTGEIPLELGNIEGLELLYLFENQLTGTIPVELSTLKNLSKLDLSINALTGPIPLG 380
Query: 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNM 396
L L L L+ N G +P ++G+ L L++ NHLSG IP + + ++++N+
Sbjct: 381 FQYLRGLFMLQLFQNSLSGTIPPKLGWYSDLWVLDMSDNHLSGRIPSYLCLHSNMIILNL 440
Query: 397 CENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN 456
N+L G IP +L +LR +NNL G+ N+T ++L QN G I
Sbjct: 441 GTNNLSGNIPTGITTCKTLVQLRLARNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPRE 500
Query: 457 WRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLIL 516
N L + N G +P EIG S+L L++SSN + G++P + L +L +
Sbjct: 501 VGNCSALQRLQLADNGFTGELPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDM 560
Query: 517 NLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE 576
N SG +P E GSL +L+ L LS N LS +IP ++GNLS+L L + N FN IP E
Sbjct: 561 CCNNFSGTLPSEVGSLYQLELLKLSNNNLSGTIPVALGNLSRLTELQMGGNLFNGSIPRE 620
Query: 577 FEKLIHLS-ELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRID 635
L L L+LS+N L GEIPP++ N+ LE L L++NNL IP F + SL +
Sbjct: 621 LGSLTGLQIALNLSYNKLTGEIPPELSNLVMLEFLLLNNNNLSGEIPSSFANLSSLLGYN 680
Query: 636 IAYNELQGPIPNSTAFKDGLMEGNKGLCGNFKALPSC---DAFMSHEQTSR------KKW 686
+YN L GPIP GN+GLCG L C F + T + K
Sbjct: 681 FSYNSLTGPIPLLRNISMSSFIGNEGLCG--PPLNQCIQTQPFAPSQSTGKPGGMRSSKI 738
Query: 687 VVIVFPILGMV-VLLIGLFGFFLFFGQRKRDSQEKRRTFFGPKATDDFGDPFGFSSVLNF 745
+ I ++G V ++LI L + + RR ++ G P S + F
Sbjct: 739 IAITAAVIGGVSLMLIALIVYLM------------RRPVRTVASSAQDGQPSEMSLDIYF 786
Query: 746 NGK--FLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQ 803
K F +++++ A D+F E + +G+G G+VYKA LP+G AVKK S +
Sbjct: 787 PPKEGFTFQDLVAATDNFDESFVVGRGACGTVYKAVLPAGYTLAVKKLASNHEGGNNNNV 846
Query: 804 D-EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
D F E+L L IRHRNI+K HGFC++ + ++ EY+ +GSL IL D + W+
Sbjct: 847 DNSFRAEILTLGNIRHRNIVKLHGFCNHQGSNLLLYEYMPKGSLGEILHDPSC--NLDWS 904
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-PHSSN 921
+R + G A L+YLHHDC P I H DI S N+LLD + EAHV DFG+AK ++ PHS +
Sbjct: 905 KRFKIALGAAQGLAYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPHSKS 964
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981
+A AG++GY APE A+ M+ TEK D++S+GV+ LE++ G P + + + +
Sbjct: 965 MSAIAGSYGYIAPEYAYTMKVTEKSDIYSYGVVLLELLTGKAPVQPIDQGGDVVNWVRSY 1024
Query: 982 INQN------LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
I ++ LD RL ++ +++++++A+LC SP ARP+M++V +L +
Sbjct: 1025 IRRDALSSGVLDARLTLEDERIVSHMLTVLKIALLCTSVSPVARPSMRQVVLMLIE 1080
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 569 bits (1467), Expect = e-161, Method: Compositional matrix adjust.
Identities = 381/1087 (35%), Positives = 547/1087 (50%), Gaps = 84/1087 (7%)
Query: 9 LILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWF 68
L + +L +FS+ + +E LL +K L + N L+SW +N PC W
Sbjct: 8 LAIVILCSFSFILVRSLNEEGRVLLEFKAFLNDSN---GYLASWNQLDSN-----PCNWT 59
Query: 69 GIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLR 128
GI C + V S+ L+ + L+GT L LN+S N + G IP +S L
Sbjct: 60 GIACTHLRTVTSVDLNGMNLSGTLSPL-ICKLHGLRKLNVSTNFISGPIPQDLSLCRSLE 118
Query: 129 ALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGR 188
LDL N+ GVIP ++ + L+ LY N+L GSIP +IG LS + L + NN +G
Sbjct: 119 VLDLCTNRFHGVIPIQLTMIITLKKLYLCENYLFGSIPRQIGNLSSLQELVIYSNNLTGV 178
Query: 189 IPPSLGNL------------------------------------------------SNLA 200
IPPS+ L NL
Sbjct: 179 IPPSMAKLRQLRIIRAGRNGFSGVIPSEISGCESLKVLGLAENLLEGSLPKQLEKLQNLT 238
Query: 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260
L L N L G IP +GN++ L +L L +N GSIP + L+ + LYLY N L G
Sbjct: 239 DLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGE 298
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALS 320
IP IGNL E+D SENQL G IP F ++ +L L+ LF N L G IP G L L
Sbjct: 299 IPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLE 358
Query: 321 ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV 380
+L L IN+L+G IP + L L L L+DN G +P IG+ + S L++ N LSG
Sbjct: 359 KLDLSINRLNGTIPQELQFLPYLVDLQLFDNQLEGKIPPLIGFYSNFSVLDMSANSLSGP 418
Query: 381 IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440
IP L+L+++ N L G IP+ + SL +L N L G + + NLT
Sbjct: 419 IPAHFCRFQTLILLSLGSNKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLPIELFNLQNLT 478
Query: 441 FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGK 500
L+L QN L G IS + L + NN G IPPEIG+ +K+ ++SSN + G
Sbjct: 479 ALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGH 538
Query: 501 IPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLH 560
IP + ++ +L L+ N+ SG + E G L L+ L LS N+L+ IP S G+L++L
Sbjct: 539 IPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLM 598
Query: 561 YLNLSNNQFNHKIPTEFEKLIHLS-ELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFD 619
L L N + IP E KL L L++SHN L G IP + N++ LE L L+ N L
Sbjct: 599 ELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSG 658
Query: 620 LIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFK---DGLMEGNKGLCGNFKALPSCDAFM 676
IP + SL +I+ N L G +P++ F+ GN GLC + ++ C +
Sbjct: 659 EIPASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNHGLCNSQRS--HCQPLV 716
Query: 677 SHEQTSRKKWVV---IVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKRRTFFGPKATDDF 733
H S+ W++ IL + ++IG F G + ++R F A +D
Sbjct: 717 PHSD-SKLNWLINGSQRQKILTITCIVIGSVFLITFLGLCW--TIKRREPAF--VALEDQ 771
Query: 734 GDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNS 793
P S F Y+ ++ A +F E +G+G G+VYKAE+ G + AVKK NS
Sbjct: 772 TKPDVMDSYYFPKKGFTYQGLVDATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNS 831
Query: 794 QLLFDEMADQD-EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD 852
+ E A D F E+ L +IRHRNI+K +GFC + + ++ EY+ +GSL L+
Sbjct: 832 R---GEGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQR 888
Query: 853 DAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912
WN R + G A L YLHHDC P IVH DI S N+LLD +AHV DFG+A
Sbjct: 889 GEKNCLLDWNARYRIALGAAEGLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLA 948
Query: 913 KFLN-PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP------- 964
K ++ +S + +A AG++GY APE A+ M+ TEK D++SFGV+ LE+I G P
Sbjct: 949 KLIDLSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQG 1008
Query: 965 RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
D V+ S NMI I + D RL T + + ++ ++++A+ C SP +RPTM++
Sbjct: 1009 GDLVNWVRRSIRNMIPTI-EMFDARLDTNDKRTVHEMSLVLKIALFCTSNSPASRPTMRE 1067
Query: 1025 VCNLLCK 1031
V ++ +
Sbjct: 1068 VVAMITE 1074
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 399/1229 (32%), Positives = 568/1229 (46%), Gaps = 252/1229 (20%)
Query: 31 ALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVG--RVISISLSSLGL 88
LL K SL L W N+ I+ C+W G+ C+ G RVI+++L+ LGL
Sbjct: 29 TLLEVKKSLVTNPQEDDPLRQW-----NSDNINYCSWTGVTCDNTGLFRVIALNLTGLGL 83
Query: 89 NGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKL--------------------- 127
G+ + F F +L++L+LS N L G IP +SNL+ L
Sbjct: 84 TGSISPW-FGRFDNLIHLDLSSNNLVGPIPTALSNLTSLESLFLFSNQLTGEIPSQLGSL 142
Query: 128 ---RALDLGNNQLSGVIPQEIGHLTCLRML------------------------YFDVNH 160
R+L +G+N+L G IP+ +G+L L+ML N+
Sbjct: 143 VNIRSLRIGDNELVGDIPETLGNLVNLQMLALASCRLTGPIPSQLGRLVRVQSLILQDNY 202
Query: 161 LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220
L G IP E+G S + V T N +G IP LG L NL L L NNSL G IP+ +G +
Sbjct: 203 LEGPIPAELGNCSDLTVFTAAENMLNGTIPAELGRLENLEILNLANNSLTGEIPSQLGEM 262
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN- 279
+ L L L NQL+G IP SLA+L NL L L N+L G IP N+ L +L L+ N
Sbjct: 263 SQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNH 322
Query: 280 ------------------------QLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN 315
QL G IP+ S SL + L NNSL+GSIP
Sbjct: 323 LSGSLPKSICSNNTNLEQLVLSGTQLSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFE 382
Query: 316 LEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN 375
L L++L L+ N L+G + PSI NL++L+ L LY N G +P EI L+ L L L N
Sbjct: 383 LVELTDLYLHNNTLEGTLSPSISNLTNLQWLVLYHNNLEGKLPKEISALRKLEVLFLYEN 442
Query: 376 HLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGD 435
SG IP IGN T L +++M NH G IP S L L L QN L G + + G+
Sbjct: 443 RFSGEIPQEIGNCTSLKMIDMFGNHFEGEIPPSIGRLKELNLLHLRQNELVGGLPASLGN 502
Query: 436 HPNLTFLDLSQNNLYGEI--SFNW-------------------------RNFPKLG---- 464
L LDL+ N L G I SF + RN ++
Sbjct: 503 CHQLNILDLADNQLSGSIPSSFGFLKGLEQLMLYNNSLQGNLPDSLISLRNLTRINLSHN 562
Query: 465 ----------------TFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKL 508
+F+ + N IP E+G+S L L L N + GKIP K+
Sbjct: 563 RLNGTIHPLCGSSSYLSFDVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWTLGKI 622
Query: 509 FSLNKLILNLNQLSGGVPLE------------------------FGSLTELQYLDLSANK 544
L+ L ++ N L+G +PL+ G L++L L LS+N+
Sbjct: 623 RELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQLGELKLSSNQ 682
Query: 545 ------------------------LSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580
L+ SIP+ +GNL L+ LNL NQF+ +P KL
Sbjct: 683 FVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNLGALNVLNLDKNQFSGSLPQAMGKL 742
Query: 581 IHLSELDLSHNFLQGEIPPQICNME-------------------------SLEELNLSHN 615
L EL LS N L GEIP +I ++ LE L+LSHN
Sbjct: 743 SKLYELRLSRNSLTGEIPVEIGQLQDLQSALDLSYNNFTGDIPSTIGTLSKLETLDLSHN 802
Query: 616 NLFDLIPGCFEEMRSLSRIDIAYNELQGPIPN--STAFKDGLMEGNKGLCGNFKALPSCD 673
L +PG +M+SL +++++N L G + S D + GN GLCG+ L C+
Sbjct: 803 QLTGEVPGSVGDMKSLGYLNVSFNNLGGKLKKQFSRWPADSFL-GNTGLCGS--PLSRCN 859
Query: 674 AFMSH--EQTSRKKWVVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKRRTFFGPKA-T 730
S+ +Q + VVI+ I + + + + LFF QR ++ G A T
Sbjct: 860 RVRSNNKQQGLSARSVVIISAISALTAIGLMILVIALFFKQRH---DFFKKVGHGSTAYT 916
Query: 731 DDFGDPFGFSSVLNFNG----KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIF 786
L NG +E+I++A + E++ IG G G VYKAEL +G
Sbjct: 917 SSSSSSQATHKPLFRNGASKSDIRWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETV 976
Query: 787 AVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH--SFIVSEYLDRG 844
AVKK L D++ F EV L IRHR+++K G+CS+ + ++ EY+ G
Sbjct: 977 AVKKI---LWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNG 1033
Query: 845 SLTTILKDDAAAKE-----FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899
S+ L +D E W R+ + G+A + YLHHDC+PPIVH DI S NVLLD
Sbjct: 1034 SIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLD 1093
Query: 900 SEHEAHVSDFGIAKFL------NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGV 953
S EAH+ DFG+AK L N S+ W FA ++GY APE A+ ++ATEK DV+S G+
Sbjct: 1094 SNMEAHLGDFGLAKVLTENCDTNTDSNTW--FACSYGYIAPEYAYSLKATEKSDVYSMGI 1151
Query: 954 LALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM-------------DK 1000
+ +E++ G P D V F + +M+ + +L+ + +RD + D
Sbjct: 1152 VLMEIVTGKMPTDSV---FGAEMDMVRWVETHLE--VAGSARDKLIDPKLKPLLPFEEDA 1206
Query: 1001 LMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++E+A+ C SP+ RP+ ++ C+ L
Sbjct: 1207 ACQVLEIALQCTKTSPQERPSSRQACDSL 1235
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 380/1112 (34%), Positives = 555/1112 (49%), Gaps = 119/1112 (10%)
Query: 10 ILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSL--LSSWTLYPANATKISPCTW 67
+LFLL + S ++ + L L+N+ SL L +W N +PC W
Sbjct: 19 VLFLLTLLVWTSESLNSDGQFLL-----ELKNRGFQDSLNRLHNW-----NGIDETPCNW 68
Query: 68 FGIFCNLVGR--------VISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPP 119
G+ C+ G V S+ LSS+ L+G S +L+YLNL+ N L G+IP
Sbjct: 69 IGVNCSSQGSSSSSNSLVVTSLDLSSMNLSGIVSP-SIGGLVNLVYLNLAYNALTGDIPR 127
Query: 120 QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179
+I N SKL + L NNQ G IP EI L+ LR N L G +P EIG L + L
Sbjct: 128 EIGNCSKLEVMFLNNNQFGGSIPVEINKLSQLRSFNICNNKLSGPLPEEIGDLYNLEELV 187
Query: 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQN-------- 231
NN +G +P SLGNL+ L N G+IP +G +L +L L+QN
Sbjct: 188 AYTNNLTGPLPRSLGNLNKLTTFRAGQNDFSGNIPTEIGKCLNLKLLGLAQNFISGELPK 247
Query: 232 ----------------QLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL---- 271
+ G IP + NL++L L LY NSL G IPS IGN+KSL
Sbjct: 248 EIGMLVKLQEVILWQNKFSGFIPKDIGNLTSLETLALYGNSLVGPIPSEIGNMKSLKKLY 307
Query: 272 --------------------FELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPP 311
E+D SEN L G IP+ S +S L L+ LF N L+G IP
Sbjct: 308 LYQNQLNGTIPKELGKLSKVMEIDFSENLLSGEIPVELSKISELRLLYLFQNKLTGIIPN 367
Query: 312 TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLE 371
L L++L L IN L G IPP NL+S+R L L+ N G++P +G L ++
Sbjct: 368 ELSKLRNLAKLDLSINSLTGPIPPGFQNLTSMRQLQLFHNSLSGVIPQGLGLYSPLWVVD 427
Query: 372 LCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE 431
N LSG IP I + L+L+N+ N +FG IP SL +LR N L G+
Sbjct: 428 FSENQLSGKIPPFICQQSNLILLNLGSNRIFGNIPPGVLRCKSLLQLRVVGNRLTGQFPT 487
Query: 432 AFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLD 491
NL+ ++L QN G + KL + + N ++P EI S L +
Sbjct: 488 ELCKLVNLSAIELDQNRFSGPLPPEIGTCQKLQRLHLAANQFSSNLPNEISKLSNLVTFN 547
Query: 492 LSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPK 551
+SSN + G IP + L +L L+ N G +P E GSL +L+ L LS N+ S +IP
Sbjct: 548 VSSNSLTGPIPSEIANCKMLQRLDLSRNSFIGSLPPELGSLHQLEILRLSENRFSGNIPF 607
Query: 552 SMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS-ELDLSHNFLQGEIPPQICNMESLEEL 610
++GNL+ L L + N F+ IP + L L ++LS+N GEIPP+I N+ L L
Sbjct: 608 TIGNLTHLTELQMGGNLFSGSIPPQLGLLSSLQIAMNLSYNDFSGEIPPEIGNLHLLMYL 667
Query: 611 NLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLME---GNKGLCGNFK 667
+L++N+L IP FE + SL + +YN L G +P++ F++ + GNKGLCG
Sbjct: 668 SLNNNHLSGEIPTTFENLSSLLGCNFSYNNLTGQLPHTQIFQNMTLTSFLGNKGLCGGH- 726
Query: 668 ALPSCD----------AFMSHEQTSRKKWVVIVFPILGMVVLLIGLFGFFLFFGQRKRDS 717
L SCD + + + +++ I G+ +LLI + FL R+
Sbjct: 727 -LRSCDPSHSSWPHISSLKAGSARRGRIIIIVSSVIGGISLLLIAIVVHFL------RNP 779
Query: 718 QEKRRTFFGPKATDDFGDPFGFSSVLNF--NGKFLYEEIIKAIDDFGEKYCIGKGRQGSV 775
E + K +PF S + F +F ++I++A F + Y +G+G G+V
Sbjct: 780 VEPTAPYVHDK------EPFFQESDIYFVPKERFTVKDILEATKGFHDSYIVGRGACGTV 833
Query: 776 YKAELPSGIIFAVKKFN---SQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC--SN 830
YKA +PSG AVKK + + F E+L L +IRHRNI++ + FC
Sbjct: 834 YKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQG 893
Query: 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGD 890
+ + ++ EY+ RGSL +L + W R + G A L+YLHHDC P I+H D
Sbjct: 894 SNSNLLLYEYMSRGSLGELLH-GGKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRD 952
Query: 891 ISSKNVLLDSEHEAHVSDFGIAKFLN-PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVH 949
I S N+L+D EAHV DFG+AK ++ P S + +A AG++GY APE A+ M+ TEK D++
Sbjct: 953 IKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIY 1012
Query: 950 SFGVLALEVIKGNHPRDYV---------STNFSSFSNMITEINQNLDHRLPTPSRDV-MD 999
SFGV+ LE++ G P + + N ++ +EI LD L DV ++
Sbjct: 1013 SFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEI---LDPYLTKVEDDVILN 1069
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++++ ++A+LC SP RPTM++V +L +
Sbjct: 1070 HMITVTKIAVLCTKSSPSDRPTMREVVLMLIE 1101
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 362/1004 (36%), Positives = 528/1004 (52%), Gaps = 88/1004 (8%)
Query: 62 ISPCTWFGIFCNLVGRVISISLSSLGLNGTFQD--FSFSSFPHLMYLNLSCNVLYGNIPP 119
IS G +G + + + L NG D +S S +L L L+ N L G IPP
Sbjct: 112 ISGANLTGTLPESLGDCLGLKVLDLSSNGLVGDIPWSLSKLRNLETLILNSNQLTGKIPP 171
Query: 120 QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVN-HLHGSIPLEIGKLSLINVL 178
IS SKL++L L +N L+G IP E+G L+ L ++ N + G IP EIG S + VL
Sbjct: 172 DISKCSKLKSLILFDNLLTGSIPTELGKLSGLEVIRIGGNKEISGQIPSEIGDCSNLTVL 231
Query: 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP 238
L + SG +P SLG L L L + + G IP+ +GN + L L L +N L GSIP
Sbjct: 232 GLAETSVSGNLPSSLGKLKKLETLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSGSIP 291
Query: 239 FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLM 298
+ L+ L L+L++NSL G IP IGN +L +DLS N L GSIP S LS L
Sbjct: 292 REIGQLTKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPSSIGRLSFLEEF 351
Query: 299 SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP 358
+ +N SGSIP T N +L +L L NQ+ G+IP +G L+ L + + N G +P
Sbjct: 352 MISDNKFSGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWSNQLEGSIP 411
Query: 359 NEIGYLKSLSKLELCRNHLSGVIPHSI---GNLTKLVLVNMCENHLFGLIPKSFRNLTSL 415
+ L L+L RN L+G IP + NLTKL+L++ N L G IP+ N +SL
Sbjct: 412 PGLADCTDLQALDLSRNSLTGTIPSGLFMLRNLTKLLLIS---NSLSGFIPQEIGNCSSL 468
Query: 416 ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYG 475
RLR N + G++ G + FLD S N L+G++ + +L + S N++ G
Sbjct: 469 VRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEG 528
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
S+P + S LQVLD+S+N GKIP +L SLNKLIL+ N SG +P G + L
Sbjct: 529 SLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGL 588
Query: 536 QYLDLSANKLSSSIPKSMGNLSKLHY-LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
Q LDL +N+LS IP +G++ L LNLS+N+ KIP++ L LS LDLSHN L+
Sbjct: 589 QLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLE 648
Query: 595 GEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKD- 653
G++ P + N+E+L LN I+YN G +P++ F+
Sbjct: 649 GDLAP-LANIENLVSLN------------------------ISYNSFSGYLPDNKLFRQL 683
Query: 654 --GLMEGNKGLCGNFKALPSCDAFMSHEQ-----------TSRKKWVVIVFPILGMVVLL 700
+EGNK LC + + SC F+++ + +RK + + I VVL+
Sbjct: 684 SPQDLEGNKKLCSSTQD--SC--FLTYRKGNGLGDDGDASRTRKLRLTLALLITLTVVLM 739
Query: 701 IGLFGFFLFFGQRKRDSQEKRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDD 760
I G R R+ +R + G F PF LNF+ ++II+ +
Sbjct: 740 I--LGAVAVIRAR-RNIDNERDSELGETYKWQF-TPF---QKLNFS----VDQIIRCLV- 787
Query: 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLL---FDEMAD--QDEFLNEVLALTE 815
E IGKG G VY+A++ +G + AVKK ++ DE +D F EV L
Sbjct: 788 --EPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGT 845
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
IRH+NI++F G C N ++ +Y+ GSL ++L + + W+ R ++ G A L
Sbjct: 846 IRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSS-LDWDLRYRILLGAAQGL 904
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP----HSSNWTAFAGTFGY 931
+YLHHDCLPPIVH DI + N+L+ + E +++DFG+AK ++ SN AG++GY
Sbjct: 905 AYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSN--TVAGSYGY 962
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN------ 985
APE + M+ TEK DV+S+GV+ LEV+ G P D +++ + QN
Sbjct: 963 IAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID---PTVPEGIHLVDWVRQNRGSLEV 1019
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
LD L + + D++M ++ A+LC+ SP+ RPTMK V +L
Sbjct: 1020 LDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAML 1063
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 377/1096 (34%), Positives = 550/1096 (50%), Gaps = 127/1096 (11%)
Query: 9 LILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWF 68
+ L L L F + +S ST E AL++W S + +P S+ S W N + PC W
Sbjct: 20 ITLSLFLAFFISSTSASTNEVSALISWLHS--SNSPPPSVFSGW-----NPSDSDPCQWP 72
Query: 69 GIFCN-----LVGR--VISI--------------SLSSLGLNGTFQDFSFSS----FPHL 103
I C+ LV V+S+ SL L ++ T + SS L
Sbjct: 73 YITCSSSDNKLVTEINVVSVQLALPFPPNISSFTSLQKLVISNTNLTGAISSEIGDCSEL 132
Query: 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHG 163
+ ++LS N L G IP + L L+ L L +N L+G IP E+G L+ L N+L
Sbjct: 133 IVIDLSSNSLVGEIPSSLGKLKNLQELCLNSNGLTGKIPPELGDCVSLKNLEIFDNYLSE 192
Query: 164 SIPLEIGKLSLI-------------------------NVLTLCHNNFSGRIPPSLGNLSN 198
++PLE+GK+S + VL L SG +P SLG LS
Sbjct: 193 NLPLELGKISTLESIRAGGNSELSGKIPEEIGNCRNLKVLGLAATKISGSLPVSLGQLSK 252
Query: 199 LAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258
L L + + L G IP +GN + L L L N L G++P L L NL + L++N+L
Sbjct: 253 LQSLSVYSTMLSGEIPKELGNCSELINLFLYDNDLSGTLPKELGKLQNLEKMLLWQNNLH 312
Query: 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA 318
G IP IG +KSL +DLS N G+IP SF NLS+L + L +N+++GSIP N
Sbjct: 313 GPIPEEIGFMKSLNAIDLSMNYFSGTIPKSFGNLSNLQELMLSSNNITGSIPSILSNCTK 372
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L + + NQ+ G+IPP IG L L + N G +P+E+ ++L L+L +N+L+
Sbjct: 373 LVQFQIDANQISGLIPPEIGLLKELNIFLGWQNKLEGNIPDELAGCQNLQALDLSQNYLT 432
Query: 379 GVIPH---SIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGD 435
G +P + NLTKL+L++ N + G+IP N TSL RLR N + G++ + G
Sbjct: 433 GSLPAGLFQLRNLTKLLLIS---NAISGVIPLEIGNCTSLVRLRLVNNRITGEIPKGIGF 489
Query: 436 HPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495
NL+FLDLS+NNL G + N +L N S N + G +P + +KLQVLD+SSN
Sbjct: 490 LQNLSFLDLSENNLSGPVPLEISNCRQLQMLNLSNNTLQGYLPLSLSSLTKLQVLDVSSN 549
Query: 496 HIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGN 555
+ GKIP L SLN+LIL+ N +G +P G T LQ LDLS+N +S +IP+ + +
Sbjct: 550 DLTGKIPDSLGHLISLNRLILSKNSFNGEIPSSLGHCTNLQLLDLSSNNISGTIPEELFD 609
Query: 556 LSKLHY-LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSH 614
+ L LNLS N + IP L LS LD+SHN L G++ + +E+L LN+SH
Sbjct: 610 IQDLDIALNLSWNSLDGFIPERISALNRLSVLDISHNMLSGDL-SALSGLENLVSLNISH 668
Query: 615 NNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKD---GLMEGNKGLCGNFKALPS 671
N G +P+S F+ MEGN GLC K S
Sbjct: 669 ------------------------NRFSGYLPDSKVFRQLIGAEMEGNNGLCS--KGFRS 702
Query: 672 CDAFMSHEQTSRK----KWVVIVFPILGMVVLLIGLFGFFLFFGQRK--RDSQEKRRTFF 725
C S + T+++ + I +L V ++ + G ++ RD +
Sbjct: 703 CFVSNSSQLTTQRGVHSHRLRIAIGLLISVTAVLAVLGVLAVIRAKQMIRDDNDSE---- 758
Query: 726 GPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGII 785
T + + F+ N F E ++K + E IGKG G VYKAE+P+ +
Sbjct: 759 ----TGENLWTWQFTPFQKLN--FTVEHVLKCLV---EGNVIGKGCSGIVYKAEMPNREV 809
Query: 786 FAVKKF------NSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839
AVKK N +D F EV L IRH+NI++F G C N ++ +
Sbjct: 810 IAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYD 869
Query: 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899
Y+ GSL ++L + + GW R +I G A L+YLHHDC+PPIVH DI + N+L+
Sbjct: 870 YMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG 929
Query: 900 SEHEAHVSDFGIAKFLN----PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955
+ E ++ DFG+AK ++ SSN AG++GY APE + M+ TEK DV+S+GV+
Sbjct: 930 PDFEPYIGDFGLAKLVDDGDFARSSN--TIAGSYGYIAPEYGYSMKITEKSDVYSYGVVV 987
Query: 956 LEVIKGNHPRDYVSTNFSSFSNMITEIN--QNLDHRLPTPSRDVMDKLMSIMEVAILCLV 1013
LEV+ G P D + + + +I Q +D L ++++M + VA+LC+
Sbjct: 988 LEVLTGKQPIDPTIPDGLHIVDWVKKIRDIQVIDQGLQARPESEVEEMMQTLGVALLCIN 1047
Query: 1014 ESPEARPTMKKVCNLL 1029
PE RPTMK V +L
Sbjct: 1048 PIPEDRPTMKDVAAML 1063
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 354/1046 (33%), Positives = 518/1046 (49%), Gaps = 99/1046 (9%)
Query: 60 TKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPP 119
+I CT +F R LNG+ + +L LNL N G IP
Sbjct: 210 AEIGNCTSLALFAAAFNR----------LNGSLP-AELNRLKNLQTLNLGDNSFSGEIPS 258
Query: 120 QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179
Q+ +L ++ L+L NQL G+IP+ + L L+ L N+L G I E +++ + L
Sbjct: 259 QLGDLVSIQYLNLIGNQLQGLIPKRLTELANLQTLDLSSNNLTGVIHEEFWRMNQLEFLV 318
Query: 180 LCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP 238
L N SG +P ++ N ++L L+L+ L G IP + N SL +LDLS N L G IP
Sbjct: 319 LAKNRLSGSLPKTICSNNTSLKQLFLSETQLSGEIPAEISNCQSLKLLDLSNNTLTGQIP 378
Query: 239 FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLM 298
SL L L LYL NSL G + S I NL +L E L N L G +P L L +M
Sbjct: 379 DSLFQLVELTNLYLNNNSLEGTLSSSISNLTNLQEFTLYHNNLEGKVPKEIGFLGKLEIM 438
Query: 299 SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP 358
L+ N SG +P GN L E+ Y N+L G IP SIG L L L+L +N G +P
Sbjct: 439 YLYENRFSGEMPVEIGNCTRLQEIDWYGNRLSGEIPSSIGRLKDLTRLHLRENELVGNIP 498
Query: 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418
+G ++ ++L N LSG IP S G LT L L + N L G +P S NL +L R+
Sbjct: 499 ASLGNCHQMTVIDLADNQLSGSIPSSFGFLTALELFMIYNNSLQGNLPDSLINLKNLTRI 558
Query: 419 RFNQNNLFGKV--------YEAF--------GDHP-------NLTFLDLSQNNLYGEISF 455
F+ N G + Y +F GD P NL L L +N G I
Sbjct: 559 NFSSNKFNGSISPLCGSSSYLSFDVTENGFEGDIPLELGKSTNLDRLRLGKNQFTGRIPR 618
Query: 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI 515
+ +L + S N++ G IP E+G KL +DL++N++ G IP KL L +L
Sbjct: 619 TFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELK 678
Query: 516 LNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
L+ N+ G +P E SLT + L L N L+ SIP+ +GNL L+ LNL NQ + +P+
Sbjct: 679 LSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLPS 738
Query: 576 EFEKLIHLSELDLSHNFLQGEIPPQICNME-------------------------SLEEL 610
KL L EL LS N L GEIP +I ++ LE L
Sbjct: 739 TIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLESL 798
Query: 611 NLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS-TAFKDGLMEGNKGLCGNFKAL 669
+LSHN L +PG +M+SL ++++YN L+G + + ++ GN GLCG+ L
Sbjct: 799 DLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKKQFSRWQADAFVGNAGLCGS--PL 856
Query: 670 PSCDAFMSHEQTS-RKKWVVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKRRTFFGPK 728
C+ S Q S K VVI+ I + + + + LFF Q D +K R
Sbjct: 857 SHCNRAGSKNQRSLSPKTVVIISAISSLAAIALMVLVIILFFKQ-NHDLFKKVRGGNSAF 915
Query: 729 ATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAV 788
+++ S +++I++A E++ IG G G VYKAEL +G AV
Sbjct: 916 SSNSSSSQAPLFSNGGAKSDIKWDDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAV 975
Query: 789 KKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH--SFIVSEYLDRGSL 846
KK L D++ F EV L IRHR+++K G+CS+ + ++ EY+ GS+
Sbjct: 976 KKI---LWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSV 1032
Query: 847 TTILKDDAAAKE---FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE 903
L + K+ GW R+ + G+A + YLH+DC+PPIVH DI S NVLLDS E
Sbjct: 1033 WDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIE 1092
Query: 904 AHVSDFGIAKFL----NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
AH+ DFG+AK L + ++ + T FAG++GY APE A+ ++ATEK DV+S G++ +E++
Sbjct: 1093 AHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIV 1152
Query: 960 KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM----------------S 1003
G P + + F ++M+ + LD P + +KL+
Sbjct: 1153 TGKMPTEAM---FDEETDMVRWVETVLD---TPPGSEAREKLIDSELKSLLPCEEEAAYQ 1206
Query: 1004 IMEVAILCLVESPEARPTMKKVCNLL 1029
++E+A+ C P+ RP+ ++ L
Sbjct: 1207 VLEIALQCTKSYPQERPSSRQASEYL 1232
|
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FZ59|PEPR2_ARATH Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust.
Identities = 344/1044 (32%), Positives = 525/1044 (50%), Gaps = 92/1044 (8%)
Query: 50 SSWTLYPANATKISPCT--WFGIFCNLVGRVI-SISLSSLGLNGTFQDFSFSSFPHLMYL 106
S+W N ++ +PC WFG+ C+L G V+ +++LS+ GL+G L+ L
Sbjct: 50 STWK---ENTSETTPCNNNWFGVICDLSGNVVETLNLSASGLSGQLGS-EIGELKSLVTL 105
Query: 107 NLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIP 166
+LS N G +P + N + L LDL NN SG +P G L L LY D N+L G IP
Sbjct: 106 DLSLNSFSGLLPSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLTFLYLDRNNLSGLIP 165
Query: 167 LEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP------------ 214
+G L + L + +NN SG IP LGN S L YL LNNN L GS+P
Sbjct: 166 ASVGGLIELVDLRMSYNNLSGTIPELLGNCSKLEYLALNNNKLNGSLPASLYLLENLGEL 225
Query: 215 ----NVMG--------NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP 262
N +G N L LDLS N +G +P + N S+L L + K +L G IP
Sbjct: 226 FVSNNSLGGRLHFGSSNCKKLVSLDLSFNDFQGGVPPEIGNCSSLHSLVMVKCNLTGTIP 285
Query: 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSEL 322
S +G L+ + +DLS+N+L G+IP N SSL + L +N L G IPP L+ L L
Sbjct: 286 SSMGMLRKVSVIDLSDNRLSGNIPQELGNCSSLETLKLNDNQLQGEIPPALSKLKKLQSL 345
Query: 323 GLYINQLDGVIPPSIGNLSSL------------------------RTLYLYDNGFYGLVP 358
L+ N+L G IP I + SL + L L++NGFYG +P
Sbjct: 346 ELFFNKLSGEIPIGIWKIQSLTQMLVYNNTLTGELPVEVTQLKHLKKLTLFNNGFYGDIP 405
Query: 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418
+G +SL +++L N +G IP + + KL L + N L G IP S R +LER+
Sbjct: 406 MSLGLNRSLEEVDLLGNRFTGEIPPHLCHGQKLRLFILGSNQLHGKIPASIRQCKTLERV 465
Query: 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIP 478
R N L G V F + +L++++L N+ G I + + L T + S N + G IP
Sbjct: 466 RLEDNKLSG-VLPEFPESLSLSYVNLGSNSFEGSIPRSLGSCKNLLTIDLSQNKLTGLIP 524
Query: 479 PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYL 538
PE+G+ L +L+LS N++ G +P Q L + N L+G +P F S L L
Sbjct: 525 PELGNLQSLGLLNLSHNYLEGPLPSQLSGCARLLYFDVGSNSLNGSIPSSFRSWKSLSTL 584
Query: 539 DLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS-ELDLSHNFLQGEI 597
LS N +IP+ + L +L L ++ N F KIP+ L L LDLS N GEI
Sbjct: 585 VLSDNNFLGAIPQFLAELDRLSDLRIARNAFGGKIPSSVGLLKSLRYGLDLSANVFTGEI 644
Query: 598 PPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLME 657
P + + +LE LN+S+N L + + ++SL+++D++YN+ GPIP +
Sbjct: 645 PTTLGALINLERLNISNNKLTGPL-SVLQSLKSLNQVDVSYNQFTGPIPVNLLSNSSKFS 703
Query: 658 GNKGLCGNFKALPSCDAFMSHEQTSRKKWVVIVFPILGMVVLLIGLFGFFLFFGQRKRDS 717
GN LC +A S A + E S K V + + ++ L L F
Sbjct: 704 GNPDLC--IQASYSVSAIIRKEFKSCKGQVKLSTWKIALIAAGSSLSVLALLFALFLVLC 761
Query: 718 QEKRRTFFGPKATDDFGDPFGFSSVLNFNG-KFLYEEIIKAIDDFGEKYCIGKGRQGSVY 776
+ KR G K D +++L G L +++ A D+ +KY IG+G G VY
Sbjct: 762 RCKR----GTKTED--------ANILAEEGLSLLLNKVLAATDNLDDKYIIGRGAHGVVY 809
Query: 777 KAELPSGIIFAVKKFNSQLLFDEMADQDEFLN-EVLALTEIRHRNIIKFHGFCSNAQHSF 835
+A L SG +AVKK L+F E ++ + E+ + +RHRN+I+ F +
Sbjct: 810 RASLGSGEEYAVKK----LIFAEHIRANQNMKREIETIGLVRHRNLIRLERFWMRKEDGL 865
Query: 836 IVSEYLDRGSLTTIL-KDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
++ +Y+ GSL +L + + W+ R N+ G+++ L+YLHHDC PPI+H DI +
Sbjct: 866 MLYQYMPNGSLHDVLHRGNQGEAVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPE 925
Query: 895 NVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
N+L+DS+ E H+ DFG+A+ L+ + + GT GY APE A+ +++ DV+S+GV+
Sbjct: 926 NILMDSDMEPHIGDFGLARILDDSTVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVV 985
Query: 955 ALEVIKGNHPRD-----------YVSTNFSSFSNMITEINQNLDHRLPTPSRD--VMDKL 1001
LE++ G D +V + SS+ + +D +L D + ++
Sbjct: 986 LLELVTGKRALDRSFPEDINIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTKLREQA 1045
Query: 1002 MSIMEVAILCLVESPEARPTMKKV 1025
+ + ++A+ C + PE RP+M+ V
Sbjct: 1046 IQVTDLALRCTDKRPENRPSMRDV 1069
|
Acts as a receptor for PEP defense peptides. Unlike typical immune receptors, senses an endogenous elicitor that potentiates PAMP-inducible plant responses. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1031 | ||||||
| 225456159 | 1038 | PREDICTED: probable LRR receptor-like se | 0.967 | 0.961 | 0.523 | 0.0 | |
| 225456161 | 1037 | PREDICTED: probable LRR receptor-like se | 0.965 | 0.959 | 0.516 | 0.0 | |
| 147767326 | 1032 | hypothetical protein VITISV_008862 [Viti | 0.970 | 0.969 | 0.515 | 0.0 | |
| 359491509 | 1032 | PREDICTED: probable LRR receptor-like se | 0.972 | 0.971 | 0.512 | 0.0 | |
| 359491512 | 1078 | PREDICTED: probable LRR receptor-like se | 0.946 | 0.905 | 0.504 | 0.0 | |
| 147772402 | 996 | hypothetical protein VITISV_022117 [Viti | 0.932 | 0.964 | 0.5 | 0.0 | |
| 255545702 | 1008 | receptor protein kinase, putative [Ricin | 0.950 | 0.972 | 0.481 | 0.0 | |
| 186511602 | 1045 | Leucine-rich repeat-containing protein [ | 0.967 | 0.954 | 0.445 | 0.0 | |
| 7267528 | 1027 | receptor protein kinase-like protein [Ar | 0.967 | 0.970 | 0.444 | 0.0 | |
| 297813345 | 1019 | hypothetical protein ARALYDRAFT_489780 [ | 0.967 | 0.978 | 0.446 | 0.0 |
| >gi|225456159|ref|XP_002278561.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/1029 (52%), Positives = 676/1029 (65%), Gaps = 31/1029 (3%)
Query: 18 SYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANAT--------KISPCTWFG 69
S +VSS S +E+ ALL WK SLQN N +SSLLS W LYP N+T SPC W+G
Sbjct: 24 SDHVSSYSNEETQALLKWKASLQNHN-HSSLLS-WDLYPNNSTNSSTHLGTATSPCKWYG 81
Query: 70 IFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRA 129
I CN G VI I+L+ GLNGT DFSFSSFP+L Y+++S N L G IPPQI L +L+
Sbjct: 82 ISCNHAGSVIKINLTESGLNGTLMDFSFSSFPNLAYVDISMNNLSGPIPPQIGLLFELKY 141
Query: 130 LDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRI 189
LDL NQ SG IP EIG LT L +L+ N L+GSIP EIG+L+ + L L N G I
Sbjct: 142 LDLSINQFSGGIPSEIGLLTNLEVLHLVQNQLNGSIPHEIGQLASLYELALYTNQLEGSI 201
Query: 190 PPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGI 249
P SLGNLSNLA LYL N L GSIP MGNL +L + + N L G IP + NL L +
Sbjct: 202 PASLGNLSNLASLYLYENQLSGSIPPEMGNLTNLVEIYSNNNNLTGPIPSTFGNLKRLTV 261
Query: 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSI 309
LYL+ NSL G IP IGNLKSL EL L EN L G IP+S +LS LTL+ L+ N LSG I
Sbjct: 262 LYLFNNSLSGPIPPEIGNLKSLQELSLYENNLSGPIPVSLCDLSGLTLLHLYANQLSGPI 321
Query: 310 PPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSK 369
P GNL++L +L L NQL+G IP S+GNL++L L+L DN G +P EIG L L
Sbjct: 322 PQEIGNLKSLVDLELSENQLNGSIPTSLGNLTNLEILFLRDNQLSGYIPQEIGKLHKLVV 381
Query: 370 LELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV 429
LE+ N L G +P I LV + +NHL G IPKS +N +L R F N L G +
Sbjct: 382 LEIDTNQLFGSLPEGICQAGSLVRFAVSDNHLSGPIPKSLKNCRNLTRALFQGNRLTGNI 441
Query: 430 YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQV 489
E GD PNL F+DLS N +GE+S NW P+L + NNI GSIP + G S+ L +
Sbjct: 442 SEVVGDCPNLEFIDLSYNRFHGELSHNWGRCPQLQRLEIAGNNITGSIPEDFGISTNLTL 501
Query: 490 LDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSI 549
LDLSSNH+VG+IP + L SL LILN NQLSG +P E GSL+ L+YLDLSAN+L+ SI
Sbjct: 502 LDLSSNHLVGEIPKKMGSLTSLLGLILNDNQLSGSIPPELGSLSHLEYLDLSANRLNGSI 561
Query: 550 PKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEE 609
P+ +G+ LHYLNLSNN+ +H IP + KL HLS+LDLSHN L G IPPQI ++SLE
Sbjct: 562 PEHLGDCLDLHYLNLSNNKLSHGIPVQMGKLSHLSQLDLSHNLLAGGIPPQIQGLQSLEM 621
Query: 610 LNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLME---GNKGLCGNF 666
L+LSHNNL IP FE+M +LS +DI+YN+LQGPIP+S AF++ +E GNK LCGN
Sbjct: 622 LDLSHNNLCGFIPKAFEDMPALSYVDISYNQLQGPIPHSNAFRNATIEVLKGNKDLCGNV 681
Query: 667 KALPSCDAFMSHEQTSRKK----WVVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKRR 722
K L C +Q KK +I+FP+LG +VLL G FL +R+R + +
Sbjct: 682 KGLQPCKYGFGVDQQPVKKSHKVVFIIIFPLLGALVLLFAFIGIFLIAERRERTPEIEE- 740
Query: 723 TFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPS 782
G D F S+ NF+G+ +YEEIIKA DF YCIGKG GSVYKAELPS
Sbjct: 741 ---GDVQNDLF-------SISNFDGRTMYEEIIKATKDFDPMYCIGKGGHGSVYKAELPS 790
Query: 783 GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842
I AVKK + EMA+Q +FLNE+ ALTEI+HRNI+K GFCS+ +H F+V EYL+
Sbjct: 791 SNIVAVKKLHPS--DTEMANQKDFLNEIRALTEIKHRNIVKLLGFCSHPRHKFLVYEYLE 848
Query: 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902
RGSL TIL + AK+ GW R+N+IKGVA+AL+Y+HHDC PPIVH D+SS N+LLDS++
Sbjct: 849 RGSLATILSRE-EAKKLGWATRVNIIKGVAHALAYMHHDCSPPIVHRDVSSNNILLDSQY 907
Query: 903 EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN 962
EAH+SDFG AK L SSN + AGTFGY APE+A+ M+ TEK DV SFGV+ALEVIKG
Sbjct: 908 EAHISDFGTAKLLKLDSSNQSILAGTFGYLAPELAYTMKVTEKTDVFSFGVIALEVIKGR 967
Query: 963 HPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTM 1022
HP D + + S + LD RLP + ++++I++ AI CL +P++RPTM
Sbjct: 968 HPGDQILSLSVSPEKDNIALEDMLDPRLPPLTPQDEGEVIAILKQAIECLKANPQSRPTM 1027
Query: 1023 KKVCNLLCK 1031
+ V +L +
Sbjct: 1028 QTVSQMLSQ 1036
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456161|ref|XP_002278590.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/1031 (51%), Positives = 673/1031 (65%), Gaps = 36/1031 (3%)
Query: 18 SYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPAN--------ATKISPCTWFG 69
S +VSS S +E+ ALL WK +L N N +SSLLS WTLYP N T++SPC W+G
Sbjct: 24 SDHVSSYSNEETQALLKWKATLHNHN-HSSLLS-WTLYPNNFTNSSTHLGTEVSPCKWYG 81
Query: 70 IFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRA 129
I CN G VI I+L+ GL GT Q FSFSSFP+L Y+++S N L G IPPQI LSKL+
Sbjct: 82 ISCNHAGSVIRINLTESGLGGTLQAFSFSSFPNLAYVDISMNNLSGPIPPQIGLLSKLKY 141
Query: 130 LDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRI 189
LDL NQ SG IP EIG LT L +L+ N L+GSIP EIG+L+ + L L N G I
Sbjct: 142 LDLSINQFSGGIPPEIGLLTNLEVLHLVQNQLNGSIPHEIGQLTSLYELALYTNQLEGSI 201
Query: 190 PPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGI 249
P SLGNLSNLA LYL N L GSIP MGNL +L L N L G IP + NL +L +
Sbjct: 202 PASLGNLSNLASLYLYENQLSGSIPPEMGNLTNLVQLYSDTNNLTGPIPSTFGNLKHLTV 261
Query: 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSI 309
LYL+ NSL G IP IGNLKSL L L N L G IP+S +LS LTL+ L+ N LSG I
Sbjct: 262 LYLFNNSLSGPIPPEIGNLKSLQGLSLYGNNLSGPIPVSLCDLSGLTLLHLYANQLSGPI 321
Query: 310 PPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSK 369
P GNL++L +L L NQL+G IP S+GNL++L L+L DN G P EIG L L
Sbjct: 322 PQEIGNLKSLVDLELSENQLNGSIPTSLGNLTNLEILFLRDNRLSGYFPQEIGKLHKLVV 381
Query: 370 LELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV 429
LE+ N L G +P I L + +NHL G IPKS +N +L R F N L G V
Sbjct: 382 LEIDTNQLFGSLPEGICQGGSLERFTVSDNHLSGPIPKSLKNCRNLTRALFQGNRLTGNV 441
Query: 430 YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQV 489
E GD PNL F+DLS N +GE+S NW P+L + NNI GSIP + G S+ L +
Sbjct: 442 SEVVGDCPNLEFIDLSYNRFHGELSHNWGRCPQLQRLEIAGNNITGSIPEDFGISTNLIL 501
Query: 490 LDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSI 549
LDLSSNH+VG+IP + L SL LILN NQLSG +P E GSL+ L+YLDLSAN+L+ SI
Sbjct: 502 LDLSSNHLVGEIPKKMGSLTSLLGLILNDNQLSGSIPPELGSLSHLEYLDLSANRLNGSI 561
Query: 550 PKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEE 609
P+ +G+ LHYLNLSNN+ +H IP + KL HLS+LDLSHN L G IP QI +ESLE
Sbjct: 562 PEHLGDCLDLHYLNLSNNKLSHGIPVQMGKLSHLSQLDLSHNLLTGGIPAQIQGLESLEM 621
Query: 610 LNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLME---GNKGLCGNF 666
L+LSHNNL IP FE+M +LS +DI+YN+LQGPIP+S AF++ +E GNK LCGN
Sbjct: 622 LDLSHNNLCGFIPKAFEDMPALSYVDISYNQLQGPIPHSNAFRNATIEVLKGNKDLCGNV 681
Query: 667 KALPSCDAFMSHEQTSRKK----WVVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKRR 722
K L C +Q KK +I+FP+LG +VLL G FL +R+R + +
Sbjct: 682 KGLQPCKYGFGVDQQPVKKSHKVVFIIIFPLLGALVLLSAFIGIFLIAERRERTPEIEE- 740
Query: 723 TFFGPKATDDFGD-PFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELP 781
GD S+ F+G+ +YEEIIKA DF YCIGKG GSVYKAELP
Sbjct: 741 -----------GDVQNNLLSISTFDGRAMYEEIIKATKDFDPMYCIGKGGHGSVYKAELP 789
Query: 782 SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYL 841
SG I AVKK + + +MA+Q +FLN+V A+TEI+HRNI++ GFCS +HSF+V EYL
Sbjct: 790 SGNIVAVKKLHPSDM--DMANQKDFLNKVRAMTEIKHRNIVRLLGFCSYPRHSFLVYEYL 847
Query: 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901
+RGSL TIL + AK+ GW R+ +IKGVA+ALSY+HHDC PPIVH DISS N+LLDS+
Sbjct: 848 ERGSLATILSRE-EAKKLGWATRVKIIKGVAHALSYMHHDCSPPIVHRDISSNNILLDSQ 906
Query: 902 HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG 961
+EAH+S+ G AK L SSN + AGT GY APE A+ M+ TEK DV+SFGV+ALEVIKG
Sbjct: 907 YEAHISNLGTAKLLKVDSSNQSKLAGTVGYVAPEHAYTMKVTEKTDVYSFGVIALEVIKG 966
Query: 962 NHPRDYV-STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARP 1020
HP D + S + S N++ + LD RLP + ++++I+++A CL +P++RP
Sbjct: 967 RHPGDQILSISVSPEKNIV--LKDMLDPRLPPLTPQDEGEVVAIIKLATACLNANPQSRP 1024
Query: 1021 TMKKVCNLLCK 1031
TM+ + +L +
Sbjct: 1025 TMEIISQMLSQ 1035
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147767326|emb|CAN68996.1| hypothetical protein VITISV_008862 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/1034 (51%), Positives = 679/1034 (65%), Gaps = 33/1034 (3%)
Query: 11 LFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKIS------- 63
L+++L S NVSS S +E+ ALL WK +L NQN L W+L+P N T S
Sbjct: 17 LWIMLVCSDNVSSHSNEETQALLKWKATLLNQN-----LLLWSLHPNNITNSSAQPGTAT 71
Query: 64 --PCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI 121
PC WFGI C G VI I+L+ LGL GT QDFSFSSFP+L Y +++ N L G IPPQI
Sbjct: 72 RTPCKWFGISCK-AGSVIRINLTDLGLIGTLQDFSFSSFPNLAYFDINMNKLSGPIPPQI 130
Query: 122 SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181
LSKL+ LDL NQ SG IP EIG LT L +L+ N L+GSIP EIG+L + L+L
Sbjct: 131 GFLSKLKYLDLSTNQFSGRIPSEIGLLTNLEVLHLVENQLNGSIPHEIGQLKSLCDLSLY 190
Query: 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSL 241
N G IP SLGNLSNL LYL+ N L G IP MGNL L L L+ N L G IP +L
Sbjct: 191 TNKLEGSIPASLGNLSNLTNLYLDENKLSGLIPPEMGNLTKLVELCLNANNLTGPIPSTL 250
Query: 242 ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301
NL +L +L LY N L G IP+ IGNLK L L LS N L G IP+S +LS L + LF
Sbjct: 251 GNLKSLTLLRLYNNQLSGPIPTEIGNLKHLRNLSLSSNYLSGPIPMSLGDLSGLKSLQLF 310
Query: 302 NNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEI 361
+N LSG IP GNL +L +L + NQL+G IP S+GNL +L LYL DN +P EI
Sbjct: 311 DNQLSGPIPQEMGNLRSLVDLEISQNQLNGSIPTSLGNLINLEILYLRDNKLSSSIPPEI 370
Query: 362 GYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
G L L +LE+ N LSG +P I L + +N L G IP+S +N SL R R
Sbjct: 371 GKLHKLVELEIDTNQLSGFLPEGICQGGSLENFTVFDNFLIGPIPESLKNCPSLARARLQ 430
Query: 422 QNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI 481
+N L G + EAFG PNL ++LS N YGE+S NW KL + + NNI GSIP +
Sbjct: 431 RNQLTGNISEAFGVCPNLYHINLSNNKFYGELSQNWGRCHKLQWLDIAGNNITGSIPADF 490
Query: 482 GDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLS 541
G S++L VL+LSSNH+VG+IP + + SL KLILN N+LSG +P E GSL +L YLDLS
Sbjct: 491 GISTQLTVLNLSSNHLVGEIPKKLGSVSSLWKLILNDNRLSGNIPPELGSLADLGYLDLS 550
Query: 542 ANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQI 601
N+L+ SIP+ +GN L+YLNLSNN+ +H IP + KL HLS LDLSHN L GEIP QI
Sbjct: 551 GNRLNGSIPEHLGNCLDLNYLNLSNNKLSHGIPVQMGKLSHLSLLDLSHNLLTGEIPSQI 610
Query: 602 CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKD---GLMEG 658
++SLE+LNLSHNNL +IP FE+M L ++DI+YN+LQG IPNS AF++ +++G
Sbjct: 611 QGLQSLEKLNLSHNNLSGIIPKAFEDMHGLWQVDISYNDLQGSIPNSEAFQNVTIEVLQG 670
Query: 659 NKGLCGNFKALPSCDAFMSHEQTSRKKWVVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQ 718
NKGLCG+ K L C+ S + + K +I+F +LG +++L G L R+
Sbjct: 671 NKGLCGSVKGLQPCEN-RSATKGTHKAVFIIIFSLLGALLILSAFIGISLISQGRRNAKM 729
Query: 719 EKRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKA 778
EK G T++ F S+ F+G+ YE II+A DF YCIG+G GSVYKA
Sbjct: 730 EKA----GDVQTENL---FSIST---FDGRTTYEAIIEATKDFDPMYCIGEGGHGSVYKA 779
Query: 779 ELPSGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837
ELPSG I AVKK + FD +MA Q +F+NE+ ALTEI+HRNI+K GFCS+++HSF+V
Sbjct: 780 ELPSGNIVAVKKLHR---FDIDMAHQKDFMNEIRALTEIKHRNIVKLLGFCSHSRHSFLV 836
Query: 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897
EYL+RGSL TIL + AKE GW R+N+IKGVA+ALSYLHHDC+PPIVH DISS NVL
Sbjct: 837 YEYLERGSLGTILSKELQAKEVGWGTRVNIIKGVAHALSYLHHDCVPPIVHRDISSNNVL 896
Query: 898 LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALE 957
LDS++EAHVSDFG AKFL SSNW+ AGT+GY APE+A+ M+ TEK DV+SFGVLALE
Sbjct: 897 LDSKYEAHVSDFGTAKFLKLDSSNWSTLAGTYGYVAPELAYTMKVTEKCDVYSFGVLALE 956
Query: 958 VIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPE 1017
V++G HP D +S+ +S + LD RLP P+ ++MS++++A CL SP+
Sbjct: 957 VMRGRHPGDLISSLSASPGKDNVVLKDVLDPRLPPPTLRDEAEVMSVIQLATACLNGSPQ 1016
Query: 1018 ARPTMKKVCNLLCK 1031
+RPTM+ V +L +
Sbjct: 1017 SRPTMQMVSQMLSQ 1030
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491509|ref|XP_002278522.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/1036 (51%), Positives = 677/1036 (65%), Gaps = 33/1036 (3%)
Query: 9 LILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKIS----- 63
L+L+++L S NVSS S +E+ ALL WK +L NQN L W+L+P N T S
Sbjct: 15 LLLWIMLVCSDNVSSHSNEETQALLKWKATLLNQN-----LLLWSLHPNNITNSSAQPGT 69
Query: 64 ----PCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPP 119
PC WFGI C G VI I+L+ LGL GT QDFSFSSFP+L Y +++ N L G IPP
Sbjct: 70 ATRTPCKWFGISCK-AGSVIRINLTDLGLIGTLQDFSFSSFPNLAYFDINMNKLSGPIPP 128
Query: 120 QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179
QI LSKL+ LDL NQ SG IP EIG LT L +L+ N L+GSIP EIG+L + L+
Sbjct: 129 QIGFLSKLKYLDLSTNQFSGRIPSEIGLLTNLEVLHLVENQLNGSIPHEIGQLKSLCDLS 188
Query: 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF 239
L N G IP SLGNLSNL LYL+ N L G IP MGNL L L L+ N L G IP
Sbjct: 189 LYTNKLEGTIPASLGNLSNLTNLYLDENKLSGLIPPEMGNLTKLVELCLNANNLTGPIPS 248
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMS 299
+L NL +L +L LY N L G IP+ IGNLK L L LS N L G IP+S +LS L +
Sbjct: 249 TLGNLKSLTLLRLYNNQLSGPIPTEIGNLKHLRNLSLSSNYLSGPIPMSLGDLSGLKSLQ 308
Query: 300 LFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPN 359
LF+N LSG IP GNL +L +L + NQL+G IP +GNL +L LYL DN +P
Sbjct: 309 LFDNQLSGPIPQEMGNLRSLVDLEISQNQLNGSIPTLLGNLINLEILYLRDNKLSSSIPP 368
Query: 360 EIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLR 419
EIG L L +LE+ N LSG +P I L + +N L G IP+S +N SL R R
Sbjct: 369 EIGKLHKLVELEIDTNQLSGFLPEGICQGGSLENFTVFDNFLIGPIPESLKNCPSLARAR 428
Query: 420 FNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPP 479
N L G + EAFG PNL ++LS N YGE+S NW KL + + NNI GSIP
Sbjct: 429 LQGNQLTGNISEAFGVCPNLYHINLSNNKFYGELSQNWGRCHKLQWLDIAGNNITGSIPA 488
Query: 480 EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLD 539
+ G S++L VL+LSSNH+VG+IP + + SL KLILN N+LSG +P E GSL +L YLD
Sbjct: 489 DFGISTQLTVLNLSSNHLVGEIPKKLGSVSSLWKLILNDNRLSGNIPPELGSLADLGYLD 548
Query: 540 LSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPP 599
LS N+L+ SIP+ +GN L+YLNLSNN+ +H IP + KL HLS LDLSHN L GEIP
Sbjct: 549 LSGNRLNGSIPEHLGNCLDLNYLNLSNNKLSHGIPVQMGKLSHLSLLDLSHNLLTGEIPS 608
Query: 600 QICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKD---GLM 656
QI ++SLE+LNLSHNNL +IP FE+M L ++DI+YN+LQG IPNS AF++ ++
Sbjct: 609 QIQGLQSLEKLNLSHNNLSGIIPKAFEDMHGLWQVDISYNDLQGSIPNSEAFQNVTIEVL 668
Query: 657 EGNKGLCGNFKALPSCDAFMSHEQTSRKKWVVIVFPILGMVVLLIGLFGFFLFFGQRKRD 716
+GNKGLCG+ K L C+ S + + K +I+F +LG +++L G L R+
Sbjct: 669 QGNKGLCGSVKGLQPCEN-RSATKGTHKAVFIIIFSLLGALLILSAFIGISLISQGRRNA 727
Query: 717 SQEKRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVY 776
EK G T++ F S+ F+G+ YE II+A DF YCIG+G GSVY
Sbjct: 728 KMEKA----GDVQTENL---FSIST---FDGRTTYEAIIEATKDFDPMYCIGEGGHGSVY 777
Query: 777 KAELPSGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835
KAELPSG I AVKK + FD +MA Q +F+NE+ ALTEI+HRNI+K GFCS+++HSF
Sbjct: 778 KAELPSGNIVAVKKLHR---FDIDMAHQKDFVNEIRALTEIKHRNIVKLLGFCSHSRHSF 834
Query: 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKN 895
+V EYL+RGSL TIL + AKE GW R+N+IKGV++ALSYLHHDC+PPIVH DISS N
Sbjct: 835 LVYEYLERGSLGTILSKELQAKEVGWGTRVNIIKGVSHALSYLHHDCVPPIVHRDISSNN 894
Query: 896 VLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955
VLLDS++EAHVSDFG AKFL SSNW+ AGT+GY APE+A+ M+ TEK DV+SFGVLA
Sbjct: 895 VLLDSKYEAHVSDFGTAKFLKLDSSNWSTLAGTYGYVAPELAYTMKVTEKCDVYSFGVLA 954
Query: 956 LEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVES 1015
LEV++G HP D +S+ S + LD RLP P+ ++ S++++A CL S
Sbjct: 955 LEVMRGRHPGDLISSLSDSPGKDNVVLKDVLDPRLPPPTFRDEAEVTSVIQLATACLNGS 1014
Query: 1016 PEARPTMKKVCNLLCK 1031
P++RPTM+ V +L +
Sbjct: 1015 PQSRPTMQMVSQMLSQ 1030
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491512|ref|XP_002278614.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/1030 (50%), Positives = 646/1030 (62%), Gaps = 54/1030 (5%)
Query: 19 YNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPA----------NATKISPCTWF 68
+++ SDS +E+ ALL WK++L N N S L SWTLYP + T PC W+
Sbjct: 51 FDMKSDSNEETQALLKWKSTLHNHN--HSFLLSWTLYPDPNNSTNSSTHHGTATGPCKWY 108
Query: 69 GIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLR 128
GI CN G VI I+L+ GL GT Q FSFSSFP+L Y+++ N L G IPPQI LSKL+
Sbjct: 109 GISCNHAGSVIRINLTESGLRGTLQAFSFSSFPNLAYVDVCINNLSGPIPPQIGLLSKLK 168
Query: 129 ALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGR 188
LDL NQ SG IP EIG LT L +L+ +L L N G
Sbjct: 169 YLDLSTNQFSGGIPPEIGLLTNLEVLH---------------------LLALYTNQLEGS 207
Query: 189 IPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG 248
IP SLGNLSNLA LYL N L GSIP MGNL +L + N L G IP + NL L
Sbjct: 208 IPASLGNLSNLASLYLYENQLSGSIPPEMGNLANLVEIYSDTNNLTGLIPSTFGNLKRLT 267
Query: 249 ILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGS 308
LYL+ N L G IP IGNL SL + L N L G IP S +LS LTL+ L+ N LSG
Sbjct: 268 TLYLFNNQLSGHIPPEIGNLTSLQGISLYANNLSGPIPASLGDLSGLTLLHLYANQLSGP 327
Query: 309 IPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLS 368
IPP GNL++L +L L NQL+G IP S+GNL++L L+L DN G P EIG L L
Sbjct: 328 IPPEIGNLKSLVDLELSENQLNGSIPTSLGNLTNLEILFLRDNHLSGYFPKEIGKLHKLV 387
Query: 369 KLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGK 428
LE+ N LSG +P I LV + +N L G IPKS +N +L R F N L G
Sbjct: 388 VLEIDTNRLSGSLPEGICQGGSLVRFTVSDNLLSGPIPKSMKNCRNLTRALFGGNQLTGN 447
Query: 429 VYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQ 488
+ E GD PNL ++DLS N +GE+S NW P+L + N+I GSIP + G S+ L
Sbjct: 448 ISEVVGDCPNLEYIDLSYNRFHGELSHNWGRCPQLQRLEMAGNDITGSIPEDFGISTNLT 507
Query: 489 VLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSS 548
+LDLSSNH+VG+IP + L SL +L LN NQLSG +P E GSL L +LDLSAN+L+ S
Sbjct: 508 LLDLSSNHLVGEIPKKMGSLTSLLELKLNDNQLSGSIPPELGSLFSLAHLDLSANRLNGS 567
Query: 549 IPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLE 608
I +++G LHYLNLSNN+ +++IP + KL HLS+LDLSHN L GEIPPQI +ESLE
Sbjct: 568 ITENLGACLNLHYLNLSNNKLSNRIPAQMGKLSHLSQLDLSHNLLSGEIPPQIEGLESLE 627
Query: 609 ELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDG---LMEGNKGLCGN 665
LNLSHNNL IP FEEMR LS IDI+YN+LQGPIPNS AF+D L++GNK LCGN
Sbjct: 628 NLNLSHNNLSGFIPKAFEEMRGLSDIDISYNQLQGPIPNSKAFRDATIELLKGNKDLCGN 687
Query: 666 FKALPSCDAFMSHEQTSRKKW----VVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKR 721
K L C Q KK +IVFP+LG +VLL G FL + KR + +
Sbjct: 688 VKGLQPCKNDSGAGQQPVKKGHKIVFIIVFPLLGALVLLFAFIGIFLIAERTKRTPEIEE 747
Query: 722 RTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELP 781
G D F S+ F+G+ +YEEIIKA DF YCIGKG GSVYKAEL
Sbjct: 748 ----GDVQNDLF-------SISTFDGRAMYEEIIKATKDFDPMYCIGKGGHGSVYKAELS 796
Query: 782 SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYL 841
SG I AVKK + + +MA+Q +F NEV ALTEI+HRNI+K GFCS+ +HSF+V EYL
Sbjct: 797 SGNIVAVKKLYASDI--DMANQRDFFNEVRALTEIKHRNIVKLLGFCSHPRHSFLVYEYL 854
Query: 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901
+RGSL +L + AK+ GW R+N+IKGVA+ALSY+HHDC PPIVH DISS N+LLDS+
Sbjct: 855 ERGSLAAMLSRE-EAKKLGWATRINIIKGVAHALSYMHHDCSPPIVHRDISSNNILLDSQ 913
Query: 902 HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG 961
+E H+SDFG AK L SSN +A AGTFGY APE A+ M+ TEK DV+SFGV+ LEVIKG
Sbjct: 914 YEPHISDFGTAKLLKLDSSNQSALAGTFGYVAPEHAYTMKVTEKTDVYSFGVITLEVIKG 973
Query: 962 NHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
HP D + + S + LD RLP + +++SI+ +A CL +PE+RPT
Sbjct: 974 RHPGDQILSLSVSPEKENIVLEDMLDPRLPPLTAQDEGEVISIINLATACLSVNPESRPT 1033
Query: 1022 MKKVCNLLCK 1031
MK + +L +
Sbjct: 1034 MKIISQMLSQ 1043
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147772402|emb|CAN73988.1| hypothetical protein VITISV_022117 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/1024 (50%), Positives = 642/1024 (62%), Gaps = 63/1024 (6%)
Query: 18 SYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGR 77
S +VSS S +E+ ALL WK SLQN + +SSLLS W LYP N+T
Sbjct: 24 SDHVSSYSNEETQALLKWKASLQNHD-HSSLLS-WDLYPNNST----------------- 64
Query: 78 VISISLSSLGLNGTFQDFSFSSFPHLMYLNLSC---NVLYGNIPPQISNLSKLRALDLGN 134
+S HL C N L G IPPQI LS+L+ LDL
Sbjct: 65 --------------------NSSTHLGTATSPCKCMNNLSGPIPPQIGLLSELKYLDLSI 104
Query: 135 NQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLG 194
NQ SG IP EIG LT L +L+ N L+GSIP EIG+L+ + L L N G IP SLG
Sbjct: 105 NQFSGGIPSEIGLLTNLEVLHLVQNQLNGSIPHEIGQLASLYELALYTNQLEGSIPASLG 164
Query: 195 NLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYK 254
NLSNLAYLYL N L SIP MGNL +L + N L G IP + NL L +LYL+
Sbjct: 165 NLSNLAYLYLYENQLSDSIPPEMGNLTNLVEIYSDTNNLIGPIPSTFGNLKRLTVLYLFN 224
Query: 255 NSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG 314
N L G IP IGNLKSL L L EN L G IP S +LS LTL+ L+ N LSG IP G
Sbjct: 225 NRLSGHIPPEIGNLKSLQGLSLYENNLSGPIPASLGDLSGLTLLHLYANQLSGPIPQEIG 284
Query: 315 NLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCR 374
NL++L +L L NQL+G IP S+GNL++L TL+L DN G +P EIG L L LE+
Sbjct: 285 NLKSLVDLELSENQLNGSIPTSLGNLTNLETLFLRDNQLSGYIPQEIGKLHKLVVLEIDT 344
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFG 434
N L G +P I L + +NHL G IPKS +N +L R F N L G + E G
Sbjct: 345 NQLFGSLPEGICQGGSLERFTVSDNHLSGPIPKSLKNCKNLTRALFGGNQLTGNISEVVG 404
Query: 435 DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
D PNL ++++S N+ +GE+S NW +P+L + NNI GSIP + G S+ L +LDLSS
Sbjct: 405 DCPNLEYINVSYNSFHGELSHNWGRYPRLQRLEMAWNNITGSIPEDFGISTDLTLLDLSS 464
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMG 554
NH+ G+IP + + SL KLILN NQLSG +P E GSL +L YLDLSAN+L+ SIP+ +G
Sbjct: 465 NHLFGEIPKKMGSVTSLWKLILNDNQLSGNIPPELGSLADLGYLDLSANRLNGSIPEHLG 524
Query: 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSH 614
+ L+YLNLSNN+ +H IP + KL HLS+LDLSHN L G+IPPQI ++SLE LNLSH
Sbjct: 525 DCLGLNYLNLSNNKLSHGIPVQMGKLGHLSQLDLSHNLLTGDIPPQIEGLQSLENLNLSH 584
Query: 615 NNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLME---GNKGLCGNFKALPS 671
NNL IP FEEM LS +DI+YN+LQGPIPNS AF+D +E GNKGLCGN K L
Sbjct: 585 NNLSGFIPKAFEEMLGLSDVDISYNQLQGPIPNSKAFRDATIEALKGNKGLCGNVKRLRP 644
Query: 672 CDAFMSHEQTSRKK----WVVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKRRTFFGP 727
C +Q KK +I+FP+LG +VLL G FL +R+R + K G
Sbjct: 645 CKYGSGVDQQPVKKSHKVVFIIIFPLLGALVLLFAFIGIFLIAARRERTPEIKE----GE 700
Query: 728 KATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFA 787
D F S+ F+G+ +YEEIIKA DF YCIGKG GSVYKAELPS I A
Sbjct: 701 VQNDLF-------SISTFDGRTMYEEIIKATKDFDPMYCIGKGGHGSVYKAELPSSNIVA 753
Query: 788 VKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLT 847
VKK + EMA+Q +FLNE+ ALTEI+HRNI+K GFCS+ +H F+V EYL+RGSL
Sbjct: 754 VKKLHPS--DTEMANQKDFLNEIRALTEIKHRNIVKLLGFCSHPRHKFLVYEYLERGSLA 811
Query: 848 TILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVS 907
TIL + AK+ GW R+N+IKGVA+AL+Y+HHDC PPIVH DISS N+LLDS++EAH+S
Sbjct: 812 TILSRE-EAKKLGWATRVNIIKGVAHALAYMHHDCSPPIVHRDISSNNILLDSQYEAHIS 870
Query: 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDY 967
DFG AK L SSN + AGTFGY APE+A+ M+ TEK DV SFGV+ALEVIKG HP D
Sbjct: 871 DFGTAKLLKLDSSNQSILAGTFGYLAPELAYTMKVTEKTDVFSFGVIALEVIKGRHPGDQ 930
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ + S + LD RLP + ++++I++ A CL +P++RPTM+ V
Sbjct: 931 ILSLSVSPEKDNIALEDMLDPRLPPLTPQDEGEVIAIIKQATECLKANPQSRPTMQTVSQ 990
Query: 1028 LLCK 1031
+L +
Sbjct: 991 MLSQ 994
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255545702|ref|XP_002513911.1| receptor protein kinase, putative [Ricinus communis] gi|223546997|gb|EEF48494.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/1030 (48%), Positives = 666/1030 (64%), Gaps = 50/1030 (4%)
Query: 12 FLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANAT----KISPCTW 67
F ++ ++N++SDS +++ +LL W +L NQ ++ S W L P N+T K SPCTW
Sbjct: 17 FGVMYAAFNIASDSAEQANSLLKWAATLHNQKYSNR--SPWPLLPENSTNPNAKTSPCTW 74
Query: 68 FGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKL 127
G+ CN G V+ I+L++ GLNGT + SFS+FP L +L+LSCN L IP +I+ L KL
Sbjct: 75 LGLSCNRGGSVVRINLTTSGLNGTLHELSFSAFPDLEFLDLSCNSLSSTIPLEITQLPKL 134
Query: 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG 187
LDL +NQLSGVIP +IG LT L L N L GSIP
Sbjct: 135 IFLDLSSNQLSGVIPPDIGLLTNLNTLRLSANRLDGSIP--------------------- 173
Query: 188 RIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL 247
S+GNL+ LA+L+L +N GSIP+ MGNL +L L + N L GSIP + +L+ L
Sbjct: 174 ---SSVGNLTELAWLHLYDNRFSGSIPSEMGNLKNLVELFMDTNLLTGSIPSTFGSLTKL 230
Query: 248 GILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307
L+LY N L G IP +G+LKSL L L N L G IP S L+SLT++ L+ N LSG
Sbjct: 231 VQLFLYNNQLSGHIPQELGDLKSLTSLSLFGNNLSGPIPASLGGLTSLTILHLYQNQLSG 290
Query: 308 SIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSL 367
+IP GNL +LS L L N+L G IP S+GNLS L L+L +N G +P +I L L
Sbjct: 291 TIPKELGNLNSLSNLELSENKLTGSIPASLGNLSRLELLFLKNNQLSGPIPEQIANLSKL 350
Query: 368 SKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFG 427
S L+L N L+G +P +I L ++ +N L G IPKS R+ SL RL N G
Sbjct: 351 SLLQLQSNQLTGYLPQNICQSKVLQNFSVNDNRLEGPIPKSMRDCKSLVRLHLEGNQFIG 410
Query: 428 KVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKL 487
+ E FG +P L F+D+ N +GEIS W P LGT S NNI G IPPEIG++++L
Sbjct: 411 NISEDFGVYPYLQFVDIRYNKFHGEISSKWGMCPHLGTLLISGNNISGIIPPEIGNAARL 470
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS 547
Q LD SSN +VG+IP + KL SL ++ L NQLS GVP EFGSLT+L+ LDLSAN+ +
Sbjct: 471 QGLDFSSNQLVGRIPKELGKLTSLVRVNLEDNQLSDGVPSEFGSLTDLESLDLSANRFNQ 530
Query: 548 SIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESL 607
SIP ++GNL KL+YLNLSNNQF+ +IP + KL+HLS+LDLS NFL GEIP ++ M+SL
Sbjct: 531 SIPGNIGNLVKLNYLNLSNNQFSQEIPIQLGKLVHLSKLDLSQNFLIGEIPSELSGMQSL 590
Query: 608 EELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLME---GNKGLCG 664
E LNLS NNL IPG +EM LS IDI+YN+L+GP+P++ AF++ +E GNKGLCG
Sbjct: 591 EVLNLSRNNLSGFIPGDLKEMHGLSSIDISYNKLEGPVPDNKAFQNSSIEAFQGNKGLCG 650
Query: 665 NFKALPSCDAFMSHEQTS----RKKWVVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQEK 720
+ + L C + + +S ++ ++VI P+ G L++ G F +R +++ E
Sbjct: 651 HVQGLQPCKPSSTEQGSSIKFHKRLFLVISLPLFG-AFLILSFLGVLFFQSKRSKEALEA 709
Query: 721 RRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAEL 780
K++ + + +S F+GK +++EII+A D F + YCIGKG GSVYKA+L
Sbjct: 710 E------KSSQESEEILLITS---FDGKSMHDEIIEATDSFNDIYCIGKGGCGSVYKAKL 760
Query: 781 PSGIIFAVKKFNSQLLFDEMAD-QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839
SG AVKK + D Q EF +E+ ALTEI+HRNI+KF+GFCS + +SF+V E
Sbjct: 761 SSGSTVAVKKLHQS--HDAWKPYQKEFWSEIRALTEIKHRNIVKFYGFCSYSAYSFLVYE 818
Query: 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899
+++GSL TIL+D+ AAKE W +R N+IKGVANALSY+HHDC PPIVH DISSKN+LLD
Sbjct: 819 CIEKGSLATILRDNEAAKELEWFKRANIIKGVANALSYMHHDCSPPIVHRDISSKNILLD 878
Query: 900 SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
SE+EA VSDFGIA+ LN SS+ TA AGTFGY APE+A+ + TEK DV+SFGVLALEVI
Sbjct: 879 SENEARVSDFGIARILNLDSSHRTALAGTFGYMAPELAYSIVVTEKCDVYSFGVLALEVI 938
Query: 960 KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR 1019
G HP + +S+ SS S + +D RLP PS +V +L++I+ +A CL +P+ R
Sbjct: 939 NGKHPGEIISSISSSSSTRKMLLENIVDLRLPFPSPEVQVELVNILNLAFTCLNSNPQVR 998
Query: 1020 PTMKKVCNLL 1029
PTM+ +C++L
Sbjct: 999 PTMEMICHML 1008
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186511602|ref|NP_849538.2| Leucine-rich repeat-containing protein [Arabidopsis thaliana] gi|281185491|sp|Q8VZG8.3|Y4885_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850; Flags: Precursor gi|18086327|gb|AAL57627.1| AT4g08850/T32A17_160 [Arabidopsis thaliana] gi|224589610|gb|ACN59338.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332657282|gb|AEE82682.1| Leucine-rich repeat-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/1025 (44%), Positives = 653/1025 (63%), Gaps = 28/1025 (2%)
Query: 8 ILILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCT- 66
+LI+ ++L+ S+ VS+ + +E+ ALL WK++ NQ +SS LSSW N S CT
Sbjct: 31 LLIISIVLSCSFAVSA-TVEEANALLKWKSTFTNQT-SSSKLSSW----VNPNTSSFCTS 84
Query: 67 WFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSK 126
W+G+ C+L G +I ++L++ G+ GTF+DF FSS P+L +++LS N G I P SK
Sbjct: 85 WYGVACSL-GSIIRLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSK 143
Query: 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFS 186
L DL NQL G IP E+G L+ L L+ N L+GSIP EIG+L+ + + + N +
Sbjct: 144 LEYFDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLT 203
Query: 187 GRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSN 246
G IP S GNL+ L LYL NSL GSIP+ +GNL +L L L +N L G IP S NL N
Sbjct: 204 GPIPSSFGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKN 263
Query: 247 LGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
+ +L +++N L G IP IGN+ +L L L N+L G IP + N+ +L ++ L+ N L+
Sbjct: 264 VTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLN 323
Query: 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS 366
GSIPP G +E++ +L + N+L G +P S G L++L L+L DN G +P I
Sbjct: 324 GSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTE 383
Query: 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLF 426
L+ L+L N+ +G +P +I KL + + +NH G +PKS R+ SL R+RF N+
Sbjct: 384 LTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFS 443
Query: 427 GKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK 486
G + EAFG +P L F+DLS NN +G++S NW KL F S N+I G+IPPEI + ++
Sbjct: 444 GDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQ 503
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
L LDLSSN I G++P + ++KL LN N+LSG +P LT L+YLDLS+N+ S
Sbjct: 504 LSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFS 563
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMES 606
S IP ++ NL +L+Y+NLS N + IP KL L LDLS+N L GEI Q ++++
Sbjct: 564 SEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQN 623
Query: 607 LEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDG---LMEGNKGLC 663
LE L+LSHNNL IP F++M +L+ +D+++N LQGPIP++ AF++ EGNK LC
Sbjct: 624 LERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLC 683
Query: 664 GNF---KALPSCDAFMSHEQTSRKKWVV-IVFPILGMVVLLIGLFGFFLFFGQRKRDSQE 719
G+ + L C S + + ++ I+ PI+G +++L G F+ F +R + +E
Sbjct: 684 GSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEE 743
Query: 720 KRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAE 779
+ G + S+ +F+GK Y+EIIKA +F KY IG G G VYKA+
Sbjct: 744 HTDSESGGETL----------SIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAK 793
Query: 780 LPSGIIFAVKKFN--SQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837
LP+ I+ AVKK N + + + EFLNE+ ALTEIRHRN++K GFCS+ +++F+V
Sbjct: 794 LPNAIM-AVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLV 852
Query: 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897
EY++RGSL +L++D AK+ W +R+NV+KGVA+ALSY+HHD P IVH DISS N+L
Sbjct: 853 YEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNIL 912
Query: 898 LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALE 957
L ++EA +SDFG AK L P SSNW+A AGT+GY APE+A+ M+ TEK DV+SFGVL LE
Sbjct: 913 LGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLE 972
Query: 958 VIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPE 1017
VIKG HP D VST SS + + DHRLP P+ ++ ++++ I++VA+LCL P+
Sbjct: 973 VIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLCLHSDPQ 1032
Query: 1018 ARPTM 1022
ARPTM
Sbjct: 1033 ARPTM 1037
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7267528|emb|CAB78010.1| receptor protein kinase-like protein [Arabidopsis thaliana] gi|7321074|emb|CAB82121.1| receptor protein kinase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/1025 (44%), Positives = 653/1025 (63%), Gaps = 28/1025 (2%)
Query: 8 ILILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCT- 66
+LI+ ++L+ S+ VS+ + +E+ ALL WK++ NQ +SS LSSW N S CT
Sbjct: 13 LLIISIVLSCSFAVSA-TVEEANALLKWKSTFTNQT-SSSKLSSW----VNPNTSSFCTS 66
Query: 67 WFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSK 126
W+G+ C+L G +I ++L++ G+ GTF+DF FSS P+L +++LS N G I P SK
Sbjct: 67 WYGVACSL-GSIIRLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSK 125
Query: 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFS 186
L DL NQL G IP E+G L+ L L+ N L+GSIP EIG+L+ + + + N +
Sbjct: 126 LEYFDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLT 185
Query: 187 GRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSN 246
G IP S GNL+ L LYL NSL GSIP+ +GNL +L L L +N L G IP S NL N
Sbjct: 186 GPIPSSFGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKN 245
Query: 247 LGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
+ +L +++N L G IP IGN+ +L L L N+L G IP + N+ +L ++ L+ N L+
Sbjct: 246 VTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLN 305
Query: 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS 366
GSIPP G +E++ +L + N+L G +P S G L++L L+L DN G +P I
Sbjct: 306 GSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTE 365
Query: 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLF 426
L+ L++ N+ +G +P +I KL + + +NH G +PKS R+ SL R+RF N+
Sbjct: 366 LTVLQVDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFS 425
Query: 427 GKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK 486
G + EAFG +P L F+DLS NN +G++S NW KL F S N+I G+IPPEI + ++
Sbjct: 426 GDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQ 485
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
L LDLSSN I G++P + ++KL LN N+LSG +P LT L+YLDLS+N+ S
Sbjct: 486 LSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFS 545
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMES 606
S IP ++ NL +L+Y+NLS N + IP KL L LDLS+N L GEI Q ++++
Sbjct: 546 SEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQN 605
Query: 607 LEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDG---LMEGNKGLC 663
LE L+LSHNNL IP F++M +L+ +D+++N LQGPIP++ AF++ EGNK LC
Sbjct: 606 LERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLC 665
Query: 664 GNF---KALPSCDAFMSHEQTSRKKWVV-IVFPILGMVVLLIGLFGFFLFFGQRKRDSQE 719
G+ + L C S + + ++ I+ PI+G +++L G F+ F +R + +E
Sbjct: 666 GSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEE 725
Query: 720 KRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAE 779
+ G + S+ +F+GK Y+EIIKA +F KY IG G G VYKA+
Sbjct: 726 HTDSESGGETL----------SIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAK 775
Query: 780 LPSGIIFAVKKFN--SQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837
LP+ I+ AVKK N + + + EFLNE+ ALTEIRHRN++K GFCS+ +++F+V
Sbjct: 776 LPNAIM-AVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLV 834
Query: 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897
EY++RGSL +L++D AK+ W +R+NV+KGVA+ALSY+HHD P IVH DISS N+L
Sbjct: 835 YEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNIL 894
Query: 898 LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALE 957
L ++EA +SDFG AK L P SSNW+A AGT+GY APE+A+ M+ TEK DV+SFGVL LE
Sbjct: 895 LGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLE 954
Query: 958 VIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPE 1017
VIKG HP D VST SS + + DHRLP P+ ++ ++++ I++VA+LCL P+
Sbjct: 955 VIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLCLHSDPQ 1014
Query: 1018 ARPTM 1022
ARPTM
Sbjct: 1015 ARPTM 1019
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297813345|ref|XP_002874556.1| hypothetical protein ARALYDRAFT_489780 [Arabidopsis lyrata subsp. lyrata] gi|297320393|gb|EFH50815.1| hypothetical protein ARALYDRAFT_489780 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/1022 (44%), Positives = 648/1022 (63%), Gaps = 25/1022 (2%)
Query: 8 ILILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCT- 66
+LI+ ++L+ S VS+ + +E+ ALL WK++ NQ +SS LSSW N S CT
Sbjct: 8 LLIISIVLSCSLVVSA-TVEEANALLKWKSTFTNQT-SSSKLSSW----VNPNTSSFCTS 61
Query: 67 WFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSK 126
W+G+ C L G ++ ++L++ G+ GTF++F FSS P+L Y++LS N G I P SK
Sbjct: 62 WYGVSC-LRGSIVRLNLTNTGIEGTFEEFPFSSLPNLTYVDLSMNRFSGTISPLWGRFSK 120
Query: 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFS 186
L DL NQL G IP E+G L+ L L+ N L+GSIP EIG+L+ + + + N +
Sbjct: 121 LVYFDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLT 180
Query: 187 GRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSN 246
G IP S GNL+ L LYL NSL G IP+ +GNL +L L L +N L G IP S NL N
Sbjct: 181 GPIPSSFGNLTRLVNLYLFINSLSGPIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKN 240
Query: 247 LGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
+ +L +++N L G IP IGN+ +L L L N+L G IP + N+ +L ++ L+ N LS
Sbjct: 241 VSLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAILHLYLNQLS 300
Query: 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS 366
GSIPP G++EA+ +L + N+L G +P S G L+ L L+L DN G +P I
Sbjct: 301 GSIPPELGDMEAMIDLEISENKLTGPVPDSFGKLTVLEWLFLRDNQLSGPIPPGIANSTE 360
Query: 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLF 426
L+ L+L N+ +G +P +I KL + + +NH G +PKS RN SL R+RF N+
Sbjct: 361 LTVLQLDTNNFTGFLPDTICRSGKLENLTLDDNHFEGPVPKSLRNCKSLVRVRFKGNHFS 420
Query: 427 GKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK 486
G + +AFG +P L F+DLS NN +G++S NW KL F S N+I G+IPPEI + ++
Sbjct: 421 GDISDAFGVYPTLNFIDLSNNNFHGQLSANWEQSTKLVAFILSNNSISGAIPPEIWNMTQ 480
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
L LDLS N I G++P + ++KL LN NQLSG +P LT L+YLDLS+N+
Sbjct: 481 LNQLDLSFNRITGELPESISNINRISKLQLNGNQLSGKIPSGIRLLTNLEYLDLSSNQFG 540
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMES 606
IP ++ NL +L+Y+NLS N + IP KL L LDLS+N L GEI Q ++++
Sbjct: 541 FEIPATLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFGSLQN 600
Query: 607 LEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDG---LMEGNKGLC 663
LE L+LSHNNL IP F++M +L+ ID+++N LQGPIP++ AF++ +EGN LC
Sbjct: 601 LERLDLSHNNLSGQIPTSFKDMLALTHIDVSHNNLQGPIPDNAAFRNASPNALEGNNDLC 660
Query: 664 GNFKALPSCDAFMSHEQTSRKKWVV-IVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKRR 722
G+ KAL C S + + ++ I+ PI+G +++L G F+ F +R + +E
Sbjct: 661 GDNKALKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEENSD 720
Query: 723 TFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPS 782
+ G + S+ +F+GK Y+EIIKA +F KY IG G G VYKA+LP+
Sbjct: 721 SESGGETL----------SIFSFDGKVRYQEIIKATGEFDSKYLIGTGGHGKVYKAKLPN 770
Query: 783 GIIFAVKKFN--SQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY 840
I+ AVKK N + + + EFLNE+ ALTEIRHRN++K GFCS+ +++F+V EY
Sbjct: 771 AIM-AVKKLNETTDSSITNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEY 829
Query: 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS 900
++RGSL +L++D AK+ W +R+NV+KGVA+ALSY+HHD P IVH DISS N+LL
Sbjct: 830 MERGSLRKVLENDDEAKKLDWGKRINVVKGVADALSYMHHDRSPAIVHRDISSGNILLGE 889
Query: 901 EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK 960
++EA +SDFG AK L P SSNW+A AGT+GY APE+A+ M+ TEK DV+SFGVL LEVIK
Sbjct: 890 DYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIK 949
Query: 961 GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARP 1020
G HP D VST SS + + DHRLP P+ ++ ++++ I++VA++CL P+ARP
Sbjct: 950 GEHPGDLVSTLSSSPPDTSLSLKTISDHRLPEPTPEIKEEVLEILKVALMCLHSDPQARP 1009
Query: 1021 TM 1022
TM
Sbjct: 1010 TM 1011
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1031 | ||||||
| TAIR|locus:2138268 | 1045 | AT4G08850 [Arabidopsis thalian | 0.961 | 0.948 | 0.412 | 2.6e-198 | |
| TAIR|locus:2011339 | 1120 | AT1G35710 [Arabidopsis thalian | 0.886 | 0.816 | 0.420 | 3.2e-184 | |
| TAIR|locus:2160791 | 1102 | AT5G63930 [Arabidopsis thalian | 0.537 | 0.502 | 0.369 | 7e-143 | |
| TAIR|locus:2020417 | 1101 | AT1G17230 [Arabidopsis thalian | 0.888 | 0.831 | 0.358 | 3.2e-136 | |
| TAIR|locus:2046525 | 1124 | AT2G33170 [Arabidopsis thalian | 0.887 | 0.814 | 0.343 | 8.1e-131 | |
| TAIR|locus:2085949 | 1141 | AT3G24240 [Arabidopsis thalian | 0.874 | 0.790 | 0.343 | 4.3e-128 | |
| TAIR|locus:2161825 | 1090 | AT5G56040 [Arabidopsis thalian | 0.587 | 0.555 | 0.337 | 2.4e-127 | |
| TAIR|locus:2120362 | 1249 | GSO1 "GASSHO1" [Arabidopsis th | 0.888 | 0.733 | 0.341 | 5.3e-127 | |
| TAIR|locus:2156349 | 1252 | GSO2 "GASSHO 2" [Arabidopsis t | 0.891 | 0.734 | 0.325 | 2.7e-123 | |
| TAIR|locus:2131518 | 1091 | AT4G26540 [Arabidopsis thalian | 0.588 | 0.556 | 0.333 | 7.5e-121 |
| TAIR|locus:2138268 AT4G08850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1920 (680.9 bits), Expect = 2.6e-198, P = 2.6e-198
Identities = 420/1017 (41%), Positives = 595/1017 (58%)
Query: 18 SYNVSSDSTKESYALLNWKTXXXXXXXXXXXXXXWTLYPANATKISPCT-WFGIFCNXXX 76
S+ VS+ + +E+ ALL WK+ W N S CT W+G+ C+
Sbjct: 41 SFAVSA-TVEEANALLKWKSTFTNQTSSSKLSS-WV----NPNTSSFCTSWYGVACSLGS 94
Query: 77 XXXXXXXXXXXXNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQ 136
GTF+DF FSS P+L +++LS N G I P SKL DL NQ
Sbjct: 95 IIRLNLTNTGI-EGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSKLEYFDLSINQ 153
Query: 137 LSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXX 196
L G IP E+G L+ L L+ N L+GSIP EIG+L+ + + + N +G IP S G
Sbjct: 154 LVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNL 213
Query: 197 XXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256
GSIP+ +GNL +L L L +N L G IP S NL N+ +L +++N
Sbjct: 214 TKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQ 273
Query: 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNL 316
L G IP IGN+ +L L L N+L G IP + N+ +L ++ L+ N L+GSIPP G +
Sbjct: 274 LSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEM 333
Query: 317 EALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNH 376
E++ +L + N+L G +P S G L++L L+L DN G +P I L+ L+L N+
Sbjct: 334 ESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNN 393
Query: 377 LSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDH 436
+G +P +I KL + + +NH G +PKS R+ SL R+RF N+ G + EAFG +
Sbjct: 394 FTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFSGDISEAFGVY 453
Query: 437 PNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNH 496
P L F+DLS NN +G++S NW KL F S N+I G+IPPEI + ++L LDLSSN
Sbjct: 454 PTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNR 513
Query: 497 IVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNL 556
I G++P + ++KL LN N+LSG +P LT L+YLDLS+N+ SS IP ++ NL
Sbjct: 514 ITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNL 573
Query: 557 SKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXX 616
+L+Y+NLS N + IP KL L LDLS+N L GEI Q
Sbjct: 574 PRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNN 633
Query: 617 XFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDG---LMEGNKGLCGNF---KALP 670
IP F++M +L+ +D+++N LQGPIP++ AF++ EGNK LCG+ + L
Sbjct: 634 LSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLCGSVNTTQGLK 693
Query: 671 SCDAFMSHEQTSRKKWVVIVFPXXXXXXXXXXXXXXXXXXXQRKRDSQEKRRTFFGPKAT 730
C + S +++ + + ++I RKR Q + T +
Sbjct: 694 PC-SITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEEHT-----DS 747
Query: 731 DDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKK 790
+ G+ S+ +F+GK Y+EIIKA +F KY IG G G VYKA+LP+ I+ AVKK
Sbjct: 748 ESGGETL---SIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAKLPNAIM-AVKK 803
Query: 791 FN--SQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTT 848
N + + + EFLNE+ ALTEIRHRN++K GFCS+ +++F+V EY++RGSL
Sbjct: 804 LNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRK 863
Query: 849 ILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908
+L++D AK+ W +R+NV+KGVA+ALSY+HHD P IVH DISS N+LL ++EA +SD
Sbjct: 864 VLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISD 923
Query: 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYV 968
FG AK L P SSNW+A AGT+GY APE+A+ M+ TEK DV+SFGVL LEVIKG HP D V
Sbjct: 924 FGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLV 983
Query: 969 STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
ST SS + + DHRLP P+ ++ ++++ I++VA+LCL P+ARPTM +
Sbjct: 984 STLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLCLHSDPQARPTMLSI 1040
|
|
| TAIR|locus:2011339 AT1G35710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1787 (634.1 bits), Expect = 3.2e-184, P = 3.2e-184
Identities = 395/939 (42%), Positives = 555/939 (59%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
S + +LM L L N L G IPP++ N+ + L L N+L+G IP +G+L L +LY
Sbjct: 193 SLGNLKNLMVLYLYENYLTGVIPPELGNMESMTDLALSQNKLTGSIPSTLGNLKNLMVLY 252
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPN 215
N+L G IP EIG + + L L N +G IP SLG G IP
Sbjct: 253 LYENYLTGVIPPEIGNMESMTNLALSQNKLTGSIPSSLGNLKNLTLLSLFQNYLTGGIPP 312
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+GN+ S+ L+LS N+L GSIP SL NL NL ILYLY+N L G IP +GN++S+ +L
Sbjct: 313 KLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPPELGNMESMIDLQ 372
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
L+ N+L GSIP SF NL +LT + L+ N L+G IP GN+E++ L L N+L G +P
Sbjct: 373 LNNNKLTGSIPSSFGNLKNLTYLYLYLNYLTGVIPQELGNMESMINLDLSQNKLTGSVPD 432
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
S GN + L +LYL N G +P + L+ L L N+ +G P ++ KL ++
Sbjct: 433 SFGNFTKLESLYLRVNHLSGAIPPGVANSSHLTTLILDTNNFTGFFPETVCKGRKLQNIS 492
Query: 396 MCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISF 455
+ NHL G IPKS R+ SL R RF N G ++EAFG +P+L F+D S N +GEIS
Sbjct: 493 LDYNHLEGPIPKSLRDCKSLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHNKFHGEISS 552
Query: 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI 515
NW PKLG S NNI G+IP EI + ++L LDLS+N++ G++P L +L++L
Sbjct: 553 NWEKSPKLGALIMSNNNITGAIPTEIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLR 612
Query: 516 LNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
LN NQLSG VP LT L+ LDLS+N SS IP++ + KLH +NLS N+F+ IP
Sbjct: 613 LNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRNKFDGSIP- 671
Query: 576 EFEKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRID 635
KL L++LDLSHN L GEIP Q+ LIP FE M +L+ +D
Sbjct: 672 RLSKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVD 731
Query: 636 IAYNELQGPIPNSTAFKDGL---MEGNKGLCGNF--KALPSCDAFMSHEQTSRKK-WVVI 689
I+ N+L+GP+P++ F+ +E N GLC N + L C ++ W+++
Sbjct: 732 ISNNKLEGPLPDTPTFRKATADALEENIGLCSNIPKQRLKPCRELKKPKKNGNLVVWILV 791
Query: 690 VFPXXXXXXXXXXXXXXXXXXXQRKRDSQEKRRTFFGPKATDDFGDPFGFSSVLNFNGKF 749
P RKR Q R T P+ ++ S+ + +GKF
Sbjct: 792 --PILGVLVILSICANTFTYCI-RKRKLQNGRNT--DPETGENM-------SIFSVDGKF 839
Query: 750 LYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMAD---QDEF 806
Y++II++ ++F + IG G VY+A L II AVK+ + + +E++ + EF
Sbjct: 840 KYQDIIESTNEFDPTHLIGTGGYSKVYRANLQDTII-AVKRLHDTI-DEEISKPVVKQEF 897
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
LNEV ALTEIRHRN++K GFCS+ +H+F++ EY+++GSL +L +D AK W +R+N
Sbjct: 898 LNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEAKRLTWTKRIN 957
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
V+KGVA+ALSY+HHD + PIVH DISS N+LLD+++ A +SDFG AK L SSNW+A A
Sbjct: 958 VVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSAVA 1017
Query: 927 GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986
GT+GY APE A+ M+ TEK DV+SFGVL LE+I G HP D VS+ SS ++ +
Sbjct: 1018 GTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALS-LRSIS 1076
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
D R+ P +KL+ ++E+A+LCL +PE+RPTM +
Sbjct: 1077 DERVLEPRGQNREKLLKMVEMALLCLQANPESRPTMLSI 1115
|
|
| TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 847 (303.2 bits), Expect = 7.0e-143, Sum P(2) = 7.0e-143
Identities = 205/555 (36%), Positives = 281/555 (50%)
Query: 111 NVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIG 170
N + G++P +I NL L L +N +SG +P+ IG+L L N + GS+P EIG
Sbjct: 155 NRISGSLPVEIGNLLSLSQLVTYSNNISGQLPRSIGNLKRLTSFRAGQNMISGSLPSEIG 214
Query: 171 KLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQ 230
+ +L L N SG +P +G G IP + N SL L L +
Sbjct: 215 GCESLVMLGLAQNQLSGELPKEIGMLKKLSQVILWENEFSGFIPREISNCTSLETLALYK 274
Query: 231 NQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFS 290
NQL G IP L +L +L LYLY+N L G IP IGNL E+D SEN L G IPL
Sbjct: 275 NQLVGPIPKELGDLQSLEFLYLYRNGLNGTIPREIGNLSYAIEIDFSENALTGEIPLELG 334
Query: 291 NLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYD 350
N+ L L+ LF N L+G+IP L+ LS+L L IN L G IP L L L L+
Sbjct: 335 NIEGLELLYLFENQLTGTIPVELSTLKNLSKLDLSINALTGPIPLGFQYLRGLFMLQLFQ 394
Query: 351 NGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFR 410
N G +P ++G+ L L++ NHLSG IP + + ++++N+ N+L G IP
Sbjct: 395 NSLSGTIPPKLGWYSDLWVLDMSDNHLSGRIPSYLCLHSNMIILNLGTNNLSGNIPTGIT 454
Query: 411 NLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASM 470
+L +LR +NNL G+ N+T ++L QN G I N L +
Sbjct: 455 TCKTLVQLRLARNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPREVGNCSALQRLQLAD 514
Query: 471 NNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFG 530
N G +P EIG S+L L++SSN + G++P + L +L + N SG +P E G
Sbjct: 515 NGFTGELPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDMCCNNFSGTLPSEVG 574
Query: 531 SLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS-ELDLS 589
SL +L+ L LS N LS +IP ++GNLS+L L + N FN IP E L L L+LS
Sbjct: 575 SLYQLELLKLSNNNLSGTIPVALGNLSRLTELQMGGNLFNGSIPRELGSLTGLQIALNLS 634
Query: 590 HNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRIDIAYNELQGPIPNST 649
+N L GEIPP++ IP F + SL + +YN L GPIP
Sbjct: 635 YNKLTGEIPPELSNLVMLEFLLLNNNNLSGEIPSSFANLSSLLGYNFSYNSLTGPIPLLR 694
Query: 650 AFKDGLMEGNKGLCG 664
GN+GLCG
Sbjct: 695 NISMSSFIGNEGLCG 709
|
|
| TAIR|locus:2020417 AT1G17230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1334 (474.7 bits), Expect = 3.2e-136, P = 3.2e-136
Identities = 338/943 (35%), Positives = 475/943 (50%)
Query: 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLH 162
L L L N L+G+IP QI NLS L+ L + +N L+GVIP + L LR++ N
Sbjct: 141 LKKLYLCENYLFGSIPRQIGNLSSLQELVIYSNNLTGVIPPSMAKLRQLRIIRAGRNGFS 200
Query: 163 GSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLNS 222
G IP EI + VL L N G +P L G IP +GN++
Sbjct: 201 GVIPSEISGCESLKVLGLAENLLEGSLPKQLEKLQNLTDLILWQNRLSGEIPPSVGNISR 260
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
L +L L +N GSIP + L+ + LYLY N L G IP IGNL E+D SENQL
Sbjct: 261 LEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLT 320
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342
G IP F ++ +L L+ LF N L G IP G L L +L L IN+L+G IP + L
Sbjct: 321 GFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINRLNGTIPQELQFLPY 380
Query: 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLF 402
L L L+DN G +P IG+ + S L++ N LSG IP L+L+++ N L
Sbjct: 381 LVDLQLFDNQLEGKIPPLIGFYSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNKLS 440
Query: 403 GLIPKSFRNLTSLERLRFNQNNLFGKV-YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFP 461
G IP+ + SL +L N L G + E F + NLT L+L QN L G IS +
Sbjct: 441 GNIPRDLKTCKSLTKLMLGDNQLTGSLPIELF-NLQNLTALELHQNWLSGNISADLGKLK 499
Query: 462 KLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQL 521
L + NN G IPPEIG+ +K+ ++SSN + G IP + ++ +L L+ N+
Sbjct: 500 NLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKF 559
Query: 522 SGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLI 581
SG + E G L L+ L LS N+L+ IP S G+L++L L L N + IP E KL
Sbjct: 560 SGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPVELGKLT 619
Query: 582 HLS-ELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRIDIAYNE 640
L L++SHN L G IP + IP + SL +I+ N
Sbjct: 620 SLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLICNISNNN 679
Query: 641 LQGPIPNSTAFK--DGL-MEGNKGLCGNFKALPSCDAFMSHEQTSRKKWVVIVFPXXXXX 697
L G +P++ F+ D GN GLC + ++ C + H S+ W++
Sbjct: 680 LVGTVPDTAVFQRMDSSNFAGNHGLCNSQRS--HCQPLVPHSD-SKLNWLINGSQRQKIL 736
Query: 698 XXXXXXXXXXXXXXQRKRDSQEKRRTFFGPK--ATDDFGDPFGFSSVLNFNGKFLYEEII 755
KRR P A +D P S F Y+ ++
Sbjct: 737 TITCIVIGSVFLITFLGLCWTIKRRE---PAFVALEDQTKPDVMDSYYFPKKGFTYQGLV 793
Query: 756 KAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDE-FLNEVLALT 814
A +F E +G+G G+VYKAE+ G + AVKK NS+ E A D F E+ L
Sbjct: 794 DATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNSR---GEGASSDNSFRAEISTLG 850
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+IRHRNI+K +GFC + + ++ EY+ +GSL L+ WN R + G A
Sbjct: 851 KIRHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGAAEG 910
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-PHSSNWTAFAGTFGYAA 933
L YLHHDC P IVH DI S N+LLD +AHV DFG+AK ++ +S + +A AG++GY A
Sbjct: 911 LCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVAGSYGYIA 970
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP-------RDYVSTNFSSFSNMITEINQNL 986
PE A+ M+ TEK D++SFGV+ LE+I G P D V+ S NMI I
Sbjct: 971 PEYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPTIEM-F 1029
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D RL T + + ++ ++++A+ C SP +RPTM++V ++
Sbjct: 1030 DARLDTNDKRTVHEMSLVLKIALFCTSNSPASRPTMREVVAMI 1072
|
|
| TAIR|locus:2046525 AT2G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1283 (456.7 bits), Expect = 8.1e-131, P = 8.1e-131
Identities = 327/953 (34%), Positives = 480/953 (50%)
Query: 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLH 162
L N+ N L G +P +I +L L L N L+G +P+ +G+L L N
Sbjct: 159 LRSFNICNNKLSGPLPEEIGDLYNLEELVAYTNNLTGPLPRSLGNLNKLTTFRAGQNDFS 218
Query: 163 GSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLNS 222
G+IP EIGK + +L L N SG +P +G G IP +GNL S
Sbjct: 219 GNIPTEIGKCLNLKLLGLAQNFISGELPKEIGMLVKLQEVILWQNKFSGFIPKDIGNLTS 278
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
L L L N L G IP + N+ +L LYLY+N L G IP +G L + E+D SEN L
Sbjct: 279 LETLALYGNSLVGPIPSEIGNMKSLKKLYLYQNQLNGTIPKELGKLSKVMEIDFSENLLS 338
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342
G IP+ S +S L L+ LF N L+G IP L L++L L IN L G IPP NL+S
Sbjct: 339 GEIPVELSKISELRLLYLFQNKLTGIIPNELSKLRNLAKLDLSINSLTGPIPPGFQNLTS 398
Query: 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLF 402
+R L L+ N G++P +G L ++ N LSG IP I + L+L+N+ N +F
Sbjct: 399 MRQLQLFHNSLSGVIPQGLGLYSPLWVVDFSENQLSGKIPPFICQQSNLILLNLGSNRIF 458
Query: 403 GLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPK 462
G IP SL +LR N L G+ NL+ ++L QN G + K
Sbjct: 459 GNIPPGVLRCKSLLQLRVVGNRLTGQFPTELCKLVNLSAIELDQNRFSGPLPPEIGTCQK 518
Query: 463 LGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS 522
L + + N ++P EI S L ++SSN + G IP + L +L L+ N
Sbjct: 519 LQRLHLAANQFSSNLPNEISKLSNLVTFNVSSNSLTGPIPSEIANCKMLQRLDLSRNSFI 578
Query: 523 GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIH 582
G +P E GSL +L+ L LS N+ S +IP ++GNL+ L L + N F+ IP + L
Sbjct: 579 GSLPPELGSLHQLEILRLSENRFSGNIPFTIGNLTHLTELQMGGNLFSGSIPPQLGLLSS 638
Query: 583 LS-ELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRIDIAYNEL 641
L ++LS+N GEIPP+I IP FE + SL + +YN L
Sbjct: 639 LQIAMNLSYNDFSGEIPPEIGNLHLLMYLSLNNNHLSGEIPTTFENLSSLLGCNFSYNNL 698
Query: 642 QGPIPNSTAFKDGLME---GNKGLCGNFKALPSCDAFMS---HEQT----SRKKWVVIVF 691
G +P++ F++ + GNKGLCG L SCD S H + S ++ +I+
Sbjct: 699 TGQLPHTQIFQNMTLTSFLGNKGLCGGH--LRSCDPSHSSWPHISSLKAGSARRGRIIII 756
Query: 692 PXXXXXXXXXXXXXXXXXXXQRKRDSQEKRRTFFGPKATDDFGDPFGFSSVLNFNGK--F 749
R+ E + K +PF S + F K F
Sbjct: 757 VSSVIGGISLLLIAIVVHFL---RNPVEPTAPYVHDK------EPFFQESDIYFVPKERF 807
Query: 750 LYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQD---EF 806
++I++A F + Y +G+G G+VYKA +PSG AVKK S + + F
Sbjct: 808 TVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSF 867
Query: 807 LNEVLALTEIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
E+L L +IRHRNI++ + FC + + ++ EY+ RGSL +L + W R
Sbjct: 868 RAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHG-GKSHSMDWPTR 926
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-PHSSNWT 923
+ G A L+YLHHDC P I+H DI S N+L+D EAHV DFG+AK ++ P S + +
Sbjct: 927 FAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVS 986
Query: 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVST--NFSSFS-NMIT 980
A AG++GY APE A+ M+ TEK D++SFGV+ LE++ G P + + ++++ N I
Sbjct: 987 AVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIR 1046
Query: 981 E---INQNLDHRLPTPSRDV-MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ ++ LD L DV ++ ++++ ++A+LC SP RPTM++V +L
Sbjct: 1047 DHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLML 1099
|
|
| TAIR|locus:2085949 AT3G24240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1238 (440.9 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
Identities = 329/958 (34%), Positives = 488/958 (50%)
Query: 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLR-MLYFDVNHL 161
L L+LS N L G+IP +S L L L L +NQL+G IP +I + L+ ++ FD N L
Sbjct: 131 LKVLDLSSNGLVGDIPWSLSKLRNLETLILNSNQLTGKIPPDISKCSKLKSLILFD-NLL 189
Query: 162 HGSIPLEIGKLSLINVLTLCHNN-FSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNL 220
GSIP E+GKLS + V+ + N SG+IP +G G++P+ +G L
Sbjct: 190 TGSIPTELGKLSGLEVIRIGGNKEISGQIPSEIGDCSNLTVLGLAETSVSGNLPSSLGKL 249
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
L L + + G IP L N S L L+LY+NSL G IP IG L L +L L +N
Sbjct: 250 KKLETLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSGSIPREIGQLTKLEQLFLWQNS 309
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L G IP N S+L ++ L N LSGSIP + G L L E + N+ G IP +I N
Sbjct: 310 LVGGIPEEIGNCSNLKMIDLSLNLLSGSIPSSIGRLSFLEEFMISDNKFSGSIPTTISNC 369
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
SSL L L N GL+P+E+G L L+ N L G IP + + T L +++ N
Sbjct: 370 SSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWSNQLEGSIPPGLADCTDLQALDLSRNS 429
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
L G IP L +L +L N+L G + + G+ +L L L N + GEI +
Sbjct: 430 LTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEIPSGIGSL 489
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
K+ + S N ++G +P EIG S+LQ++DLS+N + G +P L L L ++ NQ
Sbjct: 490 KKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQVLDVSANQ 549
Query: 521 LSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580
SG +P G L L L LS N S SIP S+G S L L+L +N+ + +IP+E +
Sbjct: 550 FSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEIPSELGDI 609
Query: 581 IHLS-ELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXF-DLIPGCFEEMRSLSRIDIAY 638
+L L+LS N L G+IP +I DL P + +L ++I+Y
Sbjct: 610 ENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEGDLAP--LANIENLVSLNISY 667
Query: 639 NELQGPIPNSTAFKDGL---MEGNKGLCGNFKALPSCDAFMSHEQ---------TSRKKW 686
N G +P++ F+ +EGNK LC + + SC F+++ + SR +
Sbjct: 668 NSFSGYLPDNKLFRQLSPQDLEGNKKLCSSTQ--DSC--FLTYRKGNGLGDDGDASRTRK 723
Query: 687 VVIVFPXXXXXXXXXXXXXXXXXXXQRKRDSQEKRRTFFGPKATDDFGDPFGFSSVLNFN 746
+ + R R+ +R + G F PF LNF+
Sbjct: 724 LRLTLALLITLTVVLMILGAVAVIRAR-RNIDNERDSELGETYKWQF-TPF---QKLNFS 778
Query: 747 GKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLL---FDEMAD- 802
++II+ + E IGKG G VY+A++ +G + AVKK ++ DE
Sbjct: 779 ----VDQIIRCLV---EPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKN 831
Query: 803 -QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGW 861
+D F EV L IRH+NI++F G C N ++ +Y+ GSL ++L + + W
Sbjct: 832 VRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSS-LDW 890
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---- 917
+ R ++ G A L+YLHHDCLPPIVH DI + N+L+ + E +++DFG+AK ++
Sbjct: 891 DLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIG 950
Query: 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN 977
SN AG++GY APE + M+ TEK DV+S+GV+ LEV+ G P D +
Sbjct: 951 RCSN--TVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID---PTVPEGIH 1005
Query: 978 MITEINQN------LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ + QN LD L + + D++M ++ A+LC+ SP+ RPTMK V +L
Sbjct: 1006 LVDWVRQNRGSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAML 1063
|
|
| TAIR|locus:2161825 AT5G56040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 810 (290.2 bits), Expect = 2.4e-127, Sum P(2) = 2.4e-127
Identities = 209/620 (33%), Positives = 305/620 (49%)
Query: 27 KESYALLNWKTXXXXXXXXXXXXXXWTLYPANATKISPCTWFGIFCNXXXXXXXXXXXXX 86
++ ALL+WK+ W A++ +PC W GI CN
Sbjct: 30 EQGLALLSWKSQLNISGDALSS---W-----KASESNPCQWVGIKCNERGQVSEIQLQVM 81
Query: 87 XXNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIG 146
G + L L+L+ L G+IP ++ +LS+L LDL +N LSG IP +I
Sbjct: 82 DFQGPLPATNLRQIKSLTLLSLTSVNLTGSIPKELGDLSELEVLDLADNSLSGEIPVDIF 141
Query: 147 HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXX 206
L L++L + N+L G IP E+G L + LTL N +G IP ++G
Sbjct: 142 KLKKLKILSLNTNNLEGVIPSELGNLVNLIELTLFDNKLAGEIPRTIGELKNLEIFRAGG 201
Query: 207 XXXF-GSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI 265
G +P +GN SL L L++ L G +P S+ NL + + LY + L G IP I
Sbjct: 202 NKNLRGELPWEIGNCESLVTLGLAETSLSGRLPASIGNLKKVQTIALYTSLLSGPIPDEI 261
Query: 266 GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLY 325
GN L L L +N + GSIP+S L L + L+ N+L G IP G L + L
Sbjct: 262 GNCTELQNLYLYQNSISGSIPVSMGRLKKLQSLLLWQNNLVGKIPTELGTCPELFLVDLS 321
Query: 326 INQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI 385
N L G IP S GNL +L+ L L N G +P E+ L+ LE+ N +SG IP I
Sbjct: 322 ENLLTGNIPRSFGNLPNLQELQLSVNQLSGTIPEELANCTKLTHLEIDNNQISGEIPPLI 381
Query: 386 GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLS 445
G LT L + +N L G+IP+S L+ + + NNL G + + NLT L L
Sbjct: 382 GKLTSLTMFFAWQNQLTGIIPESLSQCQELQAIDLSYNNLSGSIPNGIFEIRNLTKLLLL 441
Query: 446 QNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQF 505
N L G I + N L + N + G+IP EIG+ L +D+S N ++G IP +
Sbjct: 442 SNYLSGFIPPDIGNCTNLYRLRLNGNRLAGNIPAEIGNLKNLNFIDISENRLIGNIPPEI 501
Query: 506 EKLFSLNKLILNLNQLSGGVPLEFGSLTE-LQYLDLSANKLSSSIPKSMGNLSKLHYLNL 564
SL + L+ N L+GG+P G+L + LQ++DLS N L+ S+P +G+L++L LNL
Sbjct: 502 SGCTSLEFVDLHSNGLTGGLP---GTLPKSLQFIDLSDNSLTGSLPTGIGSLTELTKLNL 558
Query: 565 SNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFD-LIPG 623
+ N+F+ +IP E L L+L N GEIP ++ F IP
Sbjct: 559 AKNRFSGEIPREISSCRSLQLLNLGDNGFTGEIPNELGRIPSLAISLNLSCNHFTGEIPS 618
Query: 624 CFEEMRSLSRIDIAYNELQG 643
F + +L +D+++N+L G
Sbjct: 619 RFSSLTNLGTLDVSHNKLAG 638
|
|
| TAIR|locus:2120362 GSO1 "GASSHO1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1247 (444.0 bits), Expect = 5.3e-127, P = 5.3e-127
Identities = 332/972 (34%), Positives = 483/972 (49%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEI-GHLTCLRML 154
S + +L L+LS N L G IP + N+S+L L L NN LSG +P+ I + T L L
Sbjct: 282 SLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSNNTNLEQL 341
Query: 155 YFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIP 214
L G IP+E+ K + L L +N+ +G IP +L G++
Sbjct: 342 VLSGTQLSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELTDLYLHNNTLEGTLS 401
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
+ NL +L L L N L G +P ++ L L +L+LY+N G IP IGN SL +
Sbjct: 402 PSISNLTNLQWLVLYHNNLEGKLPKEISALRKLEVLFLYENRFSGEIPQEIGNCTSLKMI 461
Query: 275 DLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIP 334
D+ N G IP S L L L+ L N L G +P + GN L+ L L NQL G IP
Sbjct: 462 DMFGNHFEGEIPPSIGRLKELNLLHLRQNELVGGLPASLGNCHQLNILDLADNQLSGSIP 521
Query: 335 PSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLV 394
S G L L L LY+N G +P+ + L++L+++ L N L+G I H + + +
Sbjct: 522 SSFGFLKGLEQLMLYNNSLQGNLPDSLISLRNLTRINLSHNRLNGTI-HPLCGSSSYLSF 580
Query: 395 NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEIS 454
++ N IP N +L+RLR +N L GK+ G L+ LD+S N L G I
Sbjct: 581 DVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIP 640
Query: 455 FNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKL 514
KL + + N + G IPP +G S+L L LSSN V +P + LF+ KL
Sbjct: 641 LQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQLGELKLSSNQFVESLPTE---LFNCTKL 697
Query: 515 -ILNL--NQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH 571
+L+L N L+G +P E G+L L L+L N+ S S+P++MG LSKL+ L LS N
Sbjct: 698 LVLSLDGNSLNGSIPQEIGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTG 757
Query: 572 KIPTEFEKLIHL-SELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRS 630
+IP E +L L S LDLS+N G+IP I +PG +M+S
Sbjct: 758 EIPVEIGQLQDLQSALDLSYNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKS 817
Query: 631 LSRIDIAYNELQGPIPNSTAF--KDGLMEGNKGLCGNFKALPSCDAFMSH--EQTSRKKW 686
L +++++N L G + + D + GN GLCG+ L C+ S+ +Q +
Sbjct: 818 LGYLNVSFNNLGGKLKKQFSRWPADSFL-GNTGLCGS--PLSRCNRVRSNNKQQGLSARS 874
Query: 687 VVIVFPXXXXXXXXXXXXXXXXXXXQRKRDSQEKRRTFFGPKA-TDDFGDPFGFSSVLNF 745
VVI+ QR D +K G A T L
Sbjct: 875 VVIISAISALTAIGLMILVIALFFKQR-HDFFKK--VGHGSTAYTSSSSSSQATHKPLFR 931
Query: 746 NGK----FLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMA 801
NG +E+I++A + E++ IG G G VYKAEL +G AVKK L D++
Sbjct: 932 NGASKSDIRWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKI---LWKDDLM 988
Query: 802 DQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH--SFIVSEYLDRGSLTTILKDDAAAKE- 858
F EV L IRHR+++K G+CS+ + ++ EY+ GS+ L +D E
Sbjct: 989 SNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEK 1048
Query: 859 ----FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914
W R+ + G+A + YLHHDC+PPIVH DI S NVLLDS EAH+ DFG+AK
Sbjct: 1049 KKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKV 1108
Query: 915 L------NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYV 968
L N S+ W FA ++GY APE A+ ++ATEK DV+S G++ +E++ G P D V
Sbjct: 1109 LTENCDTNTDSNTW--FACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSV 1166
Query: 969 STNFSSFSNMITEINQNLD------HRLPTPSRDVM-----DKLMSIMEVAILCLVESPE 1017
F + +M+ + +L+ +L P + D ++E+A+ C SP+
Sbjct: 1167 ---FGAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQ 1223
Query: 1018 ARPTMKKVCNLL 1029
RP+ ++ C+ L
Sbjct: 1224 ERPSSRQACDSL 1235
|
|
| TAIR|locus:2156349 GSO2 "GASSHO 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 310/953 (32%), Positives = 477/953 (50%)
Query: 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEI-GHLTCLRMLYFDVNH 160
+L L+LS N L G I + +++L L L N+LSG +P+ I + T L+ L+
Sbjct: 289 NLQTLDLSSNNLTGVIHEEFWRMNQLEFLVLAKNRLSGSLPKTICSNNTSLKQLFLSETQ 348
Query: 161 LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNL 220
L G IP EI + +L L +N +G+IP SL G++ + + NL
Sbjct: 349 LSGEIPAEISNCQSLKLLDLSNNTLTGQIPDSLFQLVELTNLYLNNNSLEGTLSSSISNL 408
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+L L N L G +P + L L I+YLY+N G +P IGN L E+D N+
Sbjct: 409 TNLQEFTLYHNNLEGKVPKEIGFLGKLEIMYLYENRFSGEMPVEIGNCTRLQEIDWYGNR 468
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L G IP S L LT + L N L G+IP + GN ++ + L NQL G IP S G L
Sbjct: 469 LSGEIPSSIGRLKDLTRLHLRENELVGNIPASLGNCHQMTVIDLADNQLSGSIPSSFGFL 528
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
++L +Y+N G +P+ + LK+L+++ N +G I G+ + L ++ EN
Sbjct: 529 TALELFMIYNNSLQGNLPDSLINLKNLTRINFSSNKFNGSISPLCGSSSYLSF-DVTENG 587
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
G IP T+L+RLR +N G++ FG L+ LD+S+N+L G I
Sbjct: 588 FEGDIPLELGKSTNLDRLRLGKNQFTGRIPRTFGKISELSLLDISRNSLSGIIPVELGLC 647
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
KL + + N + G IP +G L L LSSN VG +P + L ++ L L+ N
Sbjct: 648 KKLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNS 707
Query: 521 LSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580
L+G +P E G+L L L+L N+LS +P ++G LSKL L LS N +IP E +L
Sbjct: 708 LNGSIPQEIGNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQL 767
Query: 581 IHL-SELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRIDIAYN 639
L S LDLS+N G IP I +PG +M+SL ++++YN
Sbjct: 768 QDLQSALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYN 827
Query: 640 ELQGPIPNS-TAFKDGLMEGNKGLCGNFKALPSCDAFMSHEQTSRKKWVVIVFPXXXXXX 698
L+G + + ++ GN GLCG+ L C+ S Q S V++
Sbjct: 828 NLEGKLKKQFSRWQADAFVGNAGLCGS--PLSHCNRAGSKNQRSLSPKTVVIISAISSLA 885
Query: 699 XXXXXXXXXXXXXQRKRDSQEKRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAI 758
++ D +K R +++ S +++I++A
Sbjct: 886 AIALMVLVIILFFKQNHDLFKKVRGGNSAFSSNSSSSQAPLFSNGGAKSDIKWDDIMEAT 945
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
E++ IG G G VYKAEL +G AVKK L D++ F EV L IRH
Sbjct: 946 HYLNEEFMIGSGGSGKVYKAELKNGETIAVKKI---LWKDDLMSNKSFNREVKTLGTIRH 1002
Query: 819 RNIIKFHGFCSNAQH--SFIVSEYLDRGSLTTIL--KDDAAAKE-FGWNQRMNVIKGVAN 873
R+++K G+CS+ + ++ EY+ GS+ L ++ KE GW R+ + G+A
Sbjct: 1003 RHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQ 1062
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL----NPHSSNWTAFAGTF 929
+ YLH+DC+PPIVH DI S NVLLDS EAH+ DFG+AK L + ++ + T FAG++
Sbjct: 1063 GVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSY 1122
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
GY APE A+ ++ATEK DV+S G++ +E++ G P + + F ++M+ + LD
Sbjct: 1123 GYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAM---FDEETDMVRWVETVLDTP 1179
Query: 990 LPTPSRD-VMD-KLMS-----------IMEVAILCLVESPEARPTMKKVCNLL 1029
+ +R+ ++D +L S ++E+A+ C P+ RP+ ++ L
Sbjct: 1180 PGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERPSSRQASEYL 1232
|
|
| TAIR|locus:2131518 AT4G26540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 762 (273.3 bits), Expect = 7.5e-121, Sum P(2) = 7.5e-121
Identities = 207/620 (33%), Positives = 295/620 (47%)
Query: 27 KESYALLNWKTXXXXXXXXXXXXXXWTLYPANATKISPCTWFGIFCNXXXXXXXXXXXXX 86
++ ALL+WK+ W + SPC W G+ CN
Sbjct: 27 QQGQALLSWKSQLNISGDAFSS---W-----HVADTSPCNWVGVKCNRRGEVSEIQLKGM 78
Query: 87 XXNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIG 146
G+ S S L L LS L G IP +I + ++L LDL +N LSG IP EI
Sbjct: 79 DLQGSLPVTSLRSLKSLTSLTLSSLNLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIF 138
Query: 147 HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXX 206
L L+ L + N+L G IP+EIG LS + L L N SG IP S+G
Sbjct: 139 RLKKLKTLSLNTNNLEGHIPMEIGNLSGLVELMLFDNKLSGEIPRSIGELKNLQVLRAGG 198
Query: 207 XXXF-GSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI 265
G +P +GN +L +L L++ L G +P S+ NL + + +Y + L G IP I
Sbjct: 199 NKNLRGELPWEIGNCENLVMLGLAETSLSGKLPASIGNLKRVQTIAIYTSLLSGPIPDEI 258
Query: 266 GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLY 325
G L L L +N + GSIP + L L + L+ N+L G IP GN L +
Sbjct: 259 GYCTELQNLYLYQNSISGSIPTTIGGLKKLQSLLLWQNNLVGKIPTELGNCPELWLIDFS 318
Query: 326 INQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI 385
N L G IP S G L +L+ L L N G +P E+ L+ LE+ N ++G IP +
Sbjct: 319 ENLLTGTIPRSFGKLENLQELQLSVNQISGTIPEELTNCTKLTHLEIDNNLITGEIPSLM 378
Query: 386 GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV-YEAFGDHPNLTFLDL 444
NL L + +N L G IP+S L+ + + N+L G + E FG NLT L L
Sbjct: 379 SNLRSLTMFFAWQNKLTGNIPQSLSQCRELQAIDLSYNSLSGSIPKEIFGLR-NLTKLLL 437
Query: 445 SQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ 504
N+L G I + N L + N + GSIP EIG+ L +D+S N +VG IP
Sbjct: 438 LSNDLSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPA 497
Query: 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNL 564
SL L L+ N LSG + L L+++D S N LSS++P +G L++L LNL
Sbjct: 498 ISGCESLEFLDLHTNSLSGSL-LGTTLPKSLKFIDFSDNALSSTLPPGIGLLTELTKLNL 556
Query: 565 SNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXF-DLIPG 623
+ N+ + +IP E L L+L N GEIP ++ F IP
Sbjct: 557 AKNRLSGEIPREISTCRSLQLLNLGENDFSGEIPDELGQIPSLAISLNLSCNRFVGEIPS 616
Query: 624 CFEEMRSLSRIDIAYNELQG 643
F ++++L +D+++N+L G
Sbjct: 617 RFSDLKNLGVLDVSHNQLTG 636
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8VZG8 | Y4885_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.4458 | 0.9670 | 0.9540 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| AT4G08850 | kinase; kinase; FUNCTIONS IN- kinase activity; INVOLVED IN- protein amino acid phosphorylation; LOCATED IN- plasma membrane, membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein kinase, ATP binding site (InterPro-IPR017441), Protein kinase, core (InterPro-IPR000719), Leucine-rich repeat, N-terminal (InterPro-IPR013210), Tyrosine protein kinase, active site (InterPro-IPR008266), Leucine-rich repeat (InterPro-IPR001611), Serine/threonine protein kinase-related (InterPro-IPR017442), Protein kinase-like (InterPro-IPR011009); B [...] (1045 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Rps2 | RPS2 (RESISTANT TO P. SYRINGAE 2); protein binding; Encodes a plasma membrane protein with leuc [...] (909 aa) | • | • | • | 0.878 | ||||||
| AT2G31880 | leucine-rich repeat transmembrane protein kinase, putative; Encodes a putative leucine rich rep [...] (641 aa) | • | • | 0.754 | |||||||
| AT5G48380 | leucine-rich repeat family protein / protein kinase family protein; leucine-rich repeat family [...] (620 aa) | • | • | 0.704 | |||||||
| EDA39 | EDA39 (embryo sac development arrest 39); calmodulin binding; embryo sac development arrest 39 [...] (526 aa) | • | 0.696 | ||||||||
| RPP13L4 | disease resistance protein (CC-NBS-LRR class), putative; disease resistance protein (CC-NBS-LRR [...] (852 aa) | • | 0.645 | ||||||||
| AT2G39210 | nodulin family protein; nodulin family protein; FUNCTIONS IN- molecular_function unknown; INVOL [...] (601 aa) | • | 0.641 | ||||||||
| PEN3 | PEN3 (PENETRATION 3); ATPase, coupled to transmembrane movement of substances / cadmium ion tra [...] (1469 aa) | • | 0.631 | ||||||||
| DL3220C | zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein; zinc finge [...] (376 aa) | • | 0.625 | ||||||||
| AT1G19380 | unknown protein; unknown protein; INVOLVED IN- biological_process unknown; EXPRESSED IN- 24 pla [...] (147 aa) | • | • | 0.614 | |||||||
| AT4G38550 | unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- [...] (612 aa) | • | 0.605 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1031 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-141 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-40 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-39 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-36 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-35 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-35 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 9e-33 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 9e-33 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 8e-31 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-30 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 7e-30 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 4e-27 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 6e-27 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-25 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 5e-25 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-24 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 6e-24 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 6e-24 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-23 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-23 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 1e-22 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-22 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 3e-22 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 6e-22 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 8e-22 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 1e-21 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 2e-21 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 3e-21 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 4e-21 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 6e-21 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 7e-21 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-20 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 4e-20 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 6e-20 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 6e-20 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 9e-20 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 9e-20 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 2e-19 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 5e-19 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 4e-18 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 6e-18 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 9e-18 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-17 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 5e-17 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 9e-17 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 1e-16 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 2e-16 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 2e-16 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 2e-16 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-16 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-16 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 5e-16 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 5e-16 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 5e-16 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 1e-15 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 2e-15 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-15 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 2e-15 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 2e-15 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 3e-15 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 4e-15 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 6e-15 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 6e-15 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 9e-15 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 9e-15 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 1e-14 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 1e-14 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 1e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-14 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 1e-14 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-14 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 2e-14 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 3e-14 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 4e-14 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 5e-14 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 6e-14 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 7e-14 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 8e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-13 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 1e-13 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-13 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 1e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-13 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-13 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-13 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-13 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 3e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-13 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 4e-13 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 4e-13 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 5e-13 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 7e-13 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 8e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-12 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 1e-12 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 1e-12 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 1e-12 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-12 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 1e-12 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 1e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-12 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-12 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 3e-12 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 3e-12 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 4e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-12 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 5e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-12 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 6e-12 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 6e-12 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 6e-12 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 7e-12 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 9e-12 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-11 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 1e-11 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-11 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 1e-11 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 1e-11 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 2e-11 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-11 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 3e-11 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 3e-11 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 5e-11 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 5e-11 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 5e-11 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 7e-11 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 9e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-10 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 1e-10 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 1e-10 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 1e-10 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-10 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 1e-10 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 1e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-10 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 2e-10 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 2e-10 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 2e-10 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 3e-10 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-10 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 3e-10 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 3e-10 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 3e-10 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 6e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-10 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 9e-10 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 1e-09 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 1e-09 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-09 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 2e-09 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 2e-09 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 2e-09 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 2e-09 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 2e-09 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 2e-09 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-09 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 3e-09 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 4e-09 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 4e-09 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 5e-09 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 5e-09 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 5e-09 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 5e-09 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 5e-09 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 6e-09 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 6e-09 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 6e-09 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 8e-09 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 8e-09 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 1e-08 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 1e-08 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-08 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 1e-08 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 2e-08 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-08 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 2e-08 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-08 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 2e-08 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 2e-08 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 2e-08 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 2e-08 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 3e-08 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 3e-08 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 3e-08 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 3e-08 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 3e-08 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 4e-08 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 5e-08 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 5e-08 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 6e-08 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 6e-08 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 6e-08 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 7e-08 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 7e-08 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 8e-08 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-07 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 1e-07 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 2e-07 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 2e-07 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 2e-07 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 2e-07 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 2e-07 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 2e-07 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 2e-07 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 2e-07 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 2e-07 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 2e-07 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 2e-07 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 2e-07 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-07 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 3e-07 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 4e-07 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 4e-07 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 5e-07 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 5e-07 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 5e-07 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 6e-07 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 6e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-07 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 8e-07 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 9e-07 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 1e-06 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 1e-06 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-06 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 2e-06 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 2e-06 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 2e-06 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 3e-06 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 3e-06 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 3e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-06 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 4e-06 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 4e-06 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 5e-06 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 5e-06 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 6e-06 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 7e-06 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 8e-06 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 8e-06 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 9e-06 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 1e-05 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 1e-05 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 1e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-05 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 2e-05 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 2e-05 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 2e-05 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 2e-05 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 2e-05 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 2e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 3e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 3e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 3e-05 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 3e-05 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 3e-05 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 3e-05 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 4e-05 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 4e-05 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 4e-05 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 4e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 5e-05 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 5e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 6e-05 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 6e-05 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 6e-05 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 6e-05 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 6e-05 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 9e-05 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 1e-04 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 1e-04 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 1e-04 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 1e-04 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 1e-04 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 1e-04 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 1e-04 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 1e-04 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 1e-04 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 2e-04 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 2e-04 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 2e-04 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 2e-04 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 3e-04 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 3e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 4e-04 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 4e-04 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 4e-04 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 5e-04 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 5e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 6e-04 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 6e-04 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 7e-04 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 8e-04 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 8e-04 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 9e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.001 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 0.001 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 0.001 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 0.001 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 0.001 | |
| PHA02882 | 294 | PHA02882, PHA02882, putative serine/threonine kina | 0.002 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 0.002 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 0.002 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 0.002 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 0.002 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 0.003 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 0.004 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 0.004 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 446 bits (1149), Expect = e-141
Identities = 325/1060 (30%), Positives = 493/1060 (46%), Gaps = 161/1060 (15%)
Query: 9 LILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWF 68
++F+L N S +E LL++K+S+ + LS+W + C W
Sbjct: 11 YLIFMLFFLFLNFSMLHAEELELLLSFKSSINDP---LKYLSNWN------SSADVCLWQ 61
Query: 69 GIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQIS------ 122
GI CN RV+SI LS ++G F P++ +NLS N L G IP I
Sbjct: 62 GITCNNSSRVVSIDLSGKNISGKISSAIFR-LPYIQTINLSNNQLSGPIPDDIFTTSSSL 120
Query: 123 ---NLSK--------------LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSI 165
NLS L LDL NN LSG IP +IG + L++L N L G I
Sbjct: 121 RYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKI 180
Query: 166 PLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSI 225
P + L+ + LTL N G+IP LG + +L ++YL N+L G IP +G L SL+
Sbjct: 181 PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNH 240
Query: 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285
LDL N L G IP SL NL NL L+LY+N L G IP I +L+ L LDLS+N L G I
Sbjct: 241 LDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300
Query: 286 PLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRT 345
P L +L ++ LF+N+ +G IP AL+ +L L+
Sbjct: 301 PELVIQLQNLEILHLFSNNFTGKIP------VALT------------------SLPRLQV 336
Query: 346 LYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI---GNLTKLVLVNMCENHLF 402
L L+ N F G +P +G +L+ L+L N+L+G IP + GNL KL+L + N L
Sbjct: 337 LQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFS---NSLE 393
Query: 403 GLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPK 462
G IPKS SL R+R N+ G++ F P + FLD+S NNL G I+ + P
Sbjct: 394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPS 453
Query: 463 LGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS 522
L + + N +G +P G S +L+ LDLS NQ S
Sbjct: 454 LQMLSLARNKFFGGLPDSFG-SKRLENLDLSR------------------------NQFS 488
Query: 523 GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIH 582
G VP + GSL+EL L LS NKLS IP + + KL L+LS+NQ + +IP F ++
Sbjct: 489 GAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPV 548
Query: 583 LSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
LS+LDLS N L GEIP + N+ESL ++N+SHN+ L
Sbjct: 549 LSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH------------------------LH 584
Query: 643 GPIPNSTAF---KDGLMEGNKGLCGNFKA--LPSCDAFMSHEQTSRKKWVVIVFPILGMV 697
G +P++ AF + GN LCG LP C W + LG
Sbjct: 585 GSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR-----KTPSWWFYITCTLGAF 639
Query: 698 VLLIGLFGFFLFFGQRKRDSQEKRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKA 757
++L L F F + + + + KR +D G + F+ K I
Sbjct: 640 LVLA-LVAFGFVFIRGRNNLELKR------VENED-----GTWELQFFDSKVSKSITIND 687
Query: 758 I-DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
I E+ I +G++G+ YK + + +G+ F VK+ N E+ + +
Sbjct: 688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSS--------EIADMGK 739
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
++H NI+K G C + + ++++ EY++ +L+ +L++ W +R + G+A AL
Sbjct: 740 LQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKAL 793
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+LH C P +V G++S + +++D + E H+ ++ F + Y APE
Sbjct: 794 RFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL----RLSLPGLLCTDTKCFISS-AYVAPE 848
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS------TNFSSFSNMITEINQNLDHR 989
TEK D++ FG++ +E++ G P D ++ + ++ +D
Sbjct: 849 TRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPS 908
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ ++++ +M +A+ C P ARP V L
Sbjct: 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 2e-40
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G+VY A +G A+K + D + +E L E+ L ++ H NI+K +
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKE---DSSSLLEELLREIEILKKLNHPNIVKLY 57
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G + H ++V EY + GSL +LK++ + ++ + ++ + L YLH +
Sbjct: 58 GVFEDENHLYLVMEYCEGGSLKDLLKEN--EGKLSEDEILRILLQILEGLEYLHSN---G 112
Query: 886 IVHGDISSKNVLLDS-EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH-MMRAT 943
I+H D+ +N+LLDS + ++DFG++K L S GT Y APE+ +
Sbjct: 113 IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYS 172
Query: 944 EKYDVHSFGVLALE 957
EK D+ S GV+ E
Sbjct: 173 EKSDIWSLGVILYE 186
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 3e-39
Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 766 CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G+VYKA +G I AVK ++ E+ L + H NI++
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILK--KRSEKSKKDQTARREIRILRRLSHPNIVRL 63
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ H ++V EY + G L L ++ + + L YLH +
Sbjct: 64 IDAFEDKDHLYLVMEYCEGGDLFDYLSRG---GPLSEDEAKKIALQILRGLEYLHSN--- 117
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
I+H D+ +N+LLD ++DFG+AK L SS+ T F GT Y APE+ +
Sbjct: 118 GIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEV---LLGGN 174
Query: 945 KY----DVHSFGVLALEVIKGNHPRDYVSTNFSS--FSNMITEINQNLDHRLPTP---SR 995
Y DV S GV+ E++ G P FS + + I + L L
Sbjct: 175 GYGPKVDVWSLGVILYELLTGKPP-------FSGENILDQLQLIRRILGPPLEFDEPKWS 227
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
++ +++ CL + P RPT +++
Sbjct: 228 SGSEEAKDLIKK---CLNKDPSKRPTAEEILQ 256
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 2e-36
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 23/264 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G VY A + +G + A+K D++ L E+ L +++H NI++ +
Sbjct: 7 LGEGSFGKVYLARDKKTGKLVAIKVIK---KKKIKKDRERILREIKILKKLKHPNIVRLY 63
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ ++V EY + G L +LK E ++ ++ + +AL YLH
Sbjct: 64 DVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSE---DEARFYLRQILSALEYLHSKG--- 117
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
IVH D+ +N+LLD + ++DFG+A+ L+P T F GT Y APE+ +
Sbjct: 118 IVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTT-FVGTPEYMAPEVLLGKGYGKA 176
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM--DKLMS 1003
D+ S GV+ E++ G P F ++ + + P P + +
Sbjct: 177 VDIWSLGVILYELLTGKPP-------FPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKD 229
Query: 1004 IMEVAILCLVESPEARPTMKKVCN 1027
++ LV+ PE R T ++
Sbjct: 230 LIR---KLLVKDPEKRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 1e-35
Identities = 76/271 (28%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
F IGKG G VYKA +G A+K + +++ +NE+ L + +H
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIK----LESKEKKEKIINEIQILKKCKH 56
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN------VIKGVA 872
NI+K++G +IV E+ GSL +LK NQ + V K +
Sbjct: 57 PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLK--------STNQTLTESQIAYVCKELL 108
Query: 873 NALSYLH--HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
L YLH I+H DI + N+LL S+ E + DFG++ L+ + T GT
Sbjct: 109 KGLEYLHSNG-----IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT-MVGTPY 162
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
+ APE+ + K D+ S G+ A+E+ +G P + + +I N L
Sbjct: 163 WMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY----SELPPMKALF-KIATNGPPGL 217
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
P + D+ ++ CL ++PE RPT
Sbjct: 218 RNPEK-WSDEFKDFLK---KCLQKNPEKRPT 244
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 4e-35
Identities = 71/287 (24%), Positives = 117/287 (40%), Gaps = 49/287 (17%)
Query: 761 FGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
G+K +G+G G VYK L + AVK +++EFL E + +
Sbjct: 3 LGKK--LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEG---ASEEEREEFLEEASIMKK 57
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ H NI++ G C+ + +IV+EY+ G L L+ + + +A +
Sbjct: 58 LSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEK--LTLKDLLQMALQIAKGM 115
Query: 876 SYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS-----------NWT 923
YL + VH D++++N L+ +SDFG+++ + W
Sbjct: 116 EYLESKNF----VHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWM 171
Query: 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEI 982
APE + T K DV SFGVL E+ G P Y + ++ +
Sbjct: 172 ---------APESLKDGKFTSKSDVWSFGVLLWEIFTLGEQP--YPGMSNEEVLELLED- 219
Query: 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+RLP P + D+L +M + C PE RPT ++ L
Sbjct: 220 ----GYRLPRP-ENCPDELYELM---LQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 9e-33
Identities = 71/287 (24%), Positives = 117/287 (40%), Gaps = 50/287 (17%)
Query: 761 FGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
G+K +G+G G VYK +L + AVK +EFL E + +
Sbjct: 3 LGKK--LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKED---ASEQQIEEFLREARIMRK 57
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ H N++K G C+ + +IV EY++ G L + L+ + + ++ +A +
Sbjct: 58 LDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRK--NRPKLSLSDLLSFALQIARGM 115
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN----------WTAF 925
YL +H D++++N L+ +SDFG+++ L W
Sbjct: 116 EYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWM-- 170
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM-ITEINQ 984
APE + T K DV SFGVL E+ + + M E+ +
Sbjct: 171 -------APESLKEGKFTSKSDVWSFGVLLWEIF---------TLGEQPYPGMSNEEVLE 214
Query: 985 NLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
L +RLP P +L +M C E PE RPT ++ +L
Sbjct: 215 YLKNGYRLPQPPNCP-PELYDLML---QCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 9e-33
Identities = 74/287 (25%), Positives = 114/287 (39%), Gaps = 49/287 (17%)
Query: 761 FGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
G+K +G+G G VYK L + AVK +EFL E + +
Sbjct: 3 LGKK--LGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKED---ASEQQIEEFLREARIMRK 57
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ H NI+K G C+ + IV EY+ G L L+ KE + ++ +A +
Sbjct: 58 LDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLR-KNRPKELSLSDLLSFALQIARGM 116
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN----------WTAF 925
YL +H D++++N L+ +SDFG+++ L W
Sbjct: 117 EYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWM-- 171
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM-ITEINQ 984
APE + T K DV SFGVL E+ + + M E+ +
Sbjct: 172 -------APESLKEGKFTSKSDVWSFGVLLWEIF---------TLGEEPYPGMSNAEVLE 215
Query: 985 NLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
L +RLP P +L +M C E PE RPT ++ +L
Sbjct: 216 YLKKGYRLPKPPNCP-PELYKLML---QCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 8e-31
Identities = 68/286 (23%), Positives = 113/286 (39%), Gaps = 50/286 (17%)
Query: 767 IGKGRQGSVYKAELPSGIIF----AVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G G VYK +L AVK + ++ +FL E + ++ H N++
Sbjct: 3 LGEGAFGEVYKGKLKGKDGKTTEVAVK---TLKEDASEEERKDFLKEARVMKKLGHPNVV 59
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILK------DDAAAKEFGWNQRMNVIKGVANALS 876
+ G C+ + ++V EY++ G L L+ ++ +A +
Sbjct: 60 RLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-----------WTAF 925
YL VH D++++N L+ + +SDFG+++ + W
Sbjct: 120 YLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWM-- 174
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985
APE T K DV SFGVL E+ +T + SN E+ +
Sbjct: 175 -------APESLKDGIFTSKSDVWSFGVLLWEIF------TLGATPYPGLSN--EEVLEY 219
Query: 986 L--DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
L +RLP P D+L +M C PE RPT ++ L
Sbjct: 220 LRKGYRLPKPE-YCPDELYELML---SCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 46/273 (16%)
Query: 766 CIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G+G GSVY A +G + AVK +L D + + E+ L+ ++H NI+++
Sbjct: 7 LLGRGSFGSVYLALDKDTGELMAVKS--VELSGDSEEELEALEREIRILSSLQHPNIVRY 64
Query: 825 HGFCSNAQHSF--IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN----ALSYL 878
+G + + + I EY+ GSL+++LK E VI+ L+YL
Sbjct: 65 YGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPE-------PVIRKYTRQILEGLAYL 117
Query: 879 H-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF----AGTFGYAA 933
H + IVH DI N+L+DS+ ++DFG AK L GT + A
Sbjct: 118 HSNG----IVHRDIKGANILVDSDGVVKLADFGCAKRLG--DIETGEGTGSVRGTPYWMA 171
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI----NQNLDHR 989
PE+ D+ S G +E+ G P +S N + + +
Sbjct: 172 PEVIRGEEYGRAADIWSLGCTVIEMATGKPP-------WSELGNPMAALYKIGSSGEPPE 224
Query: 990 LPT-PSRDVMDKLMSIMEVAILCLVESPEARPT 1021
+P S + D L CL P+ RPT
Sbjct: 225 IPEHLSEEAKDFLR-------KCLRRDPKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 7e-30
Identities = 74/265 (27%), Positives = 115/265 (43%), Gaps = 32/265 (12%)
Query: 766 CIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G+G G VYK P+G I+A+KK + + + + + L E+ L ++K
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKIH---VDGDEEFRKQLLRELKTLRSCESPYVVKC 64
Query: 825 HG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
+G F + S IV EY+D GSL +LK E + + + L YLH
Sbjct: 65 YGAFYKEGEIS-IVLEYMDGGSLADLLKKVGKIPE---PVLAYIARQILKGLDYLHTK-- 118
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR-A 942
I+H DI N+L++S+ E ++DFGI+K L F GT Y +PE R
Sbjct: 119 RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPE-----RIQ 173
Query: 943 TEKY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
E Y D+ S G+ LE G P ++ SF ++ I P +
Sbjct: 174 GESYSYAADIWSLGLTLLECALGKFP--FLPPGQPSFFELMQAICD-------GPPPSLP 224
Query: 999 DKLMSIMEVAIL--CLVESPEARPT 1021
+ S + CL + P+ RP+
Sbjct: 225 AEEFSPEFRDFISACLQKDPKKRPS 249
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 4e-27
Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 25/258 (9%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH---RNII 822
IG+G G+VY+ +P+G + A+K N D+++D EV L+++R NI
Sbjct: 9 IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSD---IQREVALLSQLRQSQPPNIT 65
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
K++G +I+ EY + GS+ T++K A+++ +I+ V AL Y+H
Sbjct: 66 KYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYI----SVIIREVLVALKYIHKV- 120
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
++H DI + N+L+ + + DFG+A LN +SS + F GT + APE+ +
Sbjct: 121 --GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKY 178
Query: 943 TE-KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL 1001
+ K D+ S G+ E+ GN P V + I ++ RL + KL
Sbjct: 179 YDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMMLIPKSKPPRLED---NGYSKL 230
Query: 1002 MSIMEVAILCLVESPEAR 1019
+ E CL E P+ R
Sbjct: 231 LR--EFVAACLDEEPKER 246
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 6e-27
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 766 CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
IG+G G VYK L +G A+K+ + L + + E+ L ++H NI+K+
Sbjct: 7 LIGRGAFGVVYKGLNLETGDFVAIKQIS--LEKIKEEALKSIMQEIDLLKNLKHPNIVKY 64
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN---ALSYLHHD 881
G + +I+ EY + GSL I+K +FG V V L+YLH
Sbjct: 65 IGSIETSDSLYIILEYAENGSLRQIIK------KFGPFPESLVAVYVYQVLQGLAYLHEQ 118
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
++H DI + N+L + ++DFG+A LN S + + GT + APE+ M
Sbjct: 119 ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSG 175
Query: 942 ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP-SRDVMDK 1000
A+ D+ S G +E++ GN P Y + + + + I Q+ LP S ++ D
Sbjct: 176 ASTASDIWSLGCTVIELLTGNPP--Y--YDLNPMAALF-RIVQDDHPPLPEGISPELKDF 230
Query: 1001 LMSIMEVAILCLVESPEARPTMKKVCN 1027
LM C + P RPT K++
Sbjct: 231 LMQ-------CFQKDPNLRPTAKQLLK 250
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 34/276 (12%)
Query: 767 IGKGRQGSVYKA--ELPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG G G V + +LP I A+K + + +FL E + + H NII
Sbjct: 12 IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG---SSDKQRLDFLTEASIMGQFDHPNII 68
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ G + ++ I++EY++ GSL L+++ +F Q + +++G+A+ + YL
Sbjct: 69 RLEGVVTKSRPVMIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEMN 126
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG--YAAPE-IAHM 939
VH D++++N+L++S VSDFG+++ L + +T G + APE IA+
Sbjct: 127 Y---VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY- 182
Query: 940 MRA-TEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN--MITEINQNLDHRLPTPSR 995
R T DV SFG++ EV+ G P + SN +I + +RLP P
Sbjct: 183 -RKFTSASDVWSFGIVMWEVMSYGERP-------YWDMSNQDVIKAVED--GYRLPPP-- 230
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
MD ++ ++ + C + RPT ++ + L K
Sbjct: 231 --MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 5e-25
Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 26/268 (9%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEM-ADQDEFLNEVLALTEIRHRNIIKF 824
IG G VY A LP+ A+K+ + ++ DE EV A+++ H N++K+
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRID----LEKCQTSVDELRKEVQAMSQCNHPNVVKY 64
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ ++V YL GSL I+K V+K V L YLH +
Sbjct: 65 YTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ- 123
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL-----NPHSSNWTAFAGTFGYAAPEIAHM 939
+H DI + N+LL + ++DFG++ L T F GT + APE+
Sbjct: 124 --IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKT-FVGTPCWMAPEVMEQ 180
Query: 940 MRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--ITEINQNLDHRLPTPSRD 996
+ K D+ SFG+ A+E+ G P +S + M + QN L T D
Sbjct: 181 VHGYDFKADIWSFGITAIELATGAAP-------YSKYPPMKVLMLTLQNDPPSLET-GAD 232
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKK 1024
S ++ LCL + P RPT ++
Sbjct: 233 YKKYSKSFRKMISLCLQKDPSKRPTAEE 260
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 22/266 (8%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G VY G ++ +K+ + L ++++ LNEV L ++ H NIIK++
Sbjct: 8 IGKGSFGKVYLVRRKSDGKLYVLKEID--LSNMSEKEREDALNEVKILKKLNHPNIIKYY 65
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMNVIKGVANALSYLH--HDC 882
IV EY D G L+ +K + F Q ++ + AL YLH
Sbjct: 66 ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-- 123
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I+H DI +N+ L S + DFGI+K L+ GT Y +PE+
Sbjct: 124 ---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPY 180
Query: 943 TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
K D+ S G + E+ HP + N + I + P PS+ +L
Sbjct: 181 NYKSDIWSLGCVLYELCTLKHP--FEGENLLELALKI--LKGQYP---PIPSQ-YSSELR 232
Query: 1003 SIMEVAILCLVESPEARPTMKKVCNL 1028
+++ L + PE RP++ ++
Sbjct: 233 NLVS---SLLQKDPEERPSIAQILQS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 6e-24
Identities = 74/269 (27%), Positives = 112/269 (41%), Gaps = 28/269 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKG G VYK L AVK S L D + +FL E L + H NI+K G
Sbjct: 3 IGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPD---LKRKFLQEAEILKQYDHPNIVKLIG 59
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
C Q +IV E + GSL T L+ + + + A + YL
Sbjct: 60 VCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTV--KKLLQMSLDAAAGMEYLESKN---C 114
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT----FGYAAPEIAHMMRA 942
+H D++++N L+ + +SDFG+++ +T G + APE + R
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSR--EEEGGIYTVSDGLKQIPIKWTAPEALNYGRY 172
Query: 943 TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR--DVMDK 1000
T + DV S+G+L E T + SN T +R+P P + + +
Sbjct: 173 TSESDVWSYGILLWETFSLG------DTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYR 226
Query: 1001 LMSIMEVAILCLVESPEARPTMKKVCNLL 1029
LM + C PE RP+ ++ N L
Sbjct: 227 LM------LQCWAYDPENRPSFSEIYNEL 249
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 6e-24
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 35/263 (13%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ + + I A+K N + +E +F+ E + ++ H +++ +G
Sbjct: 12 LGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEE-----DFIEEAKVMMKLSHPKLVQLYG 66
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
C+ + +IV+E+++ G L L+ + + +++ + V + YL +
Sbjct: 67 VCTQQKPLYIVTEFMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERNSF--- 121
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D++++N L+ S VSDFG+ +++ +T+ +G ++ PE+ + + +
Sbjct: 122 IHRDLAARNCLVSSTGVVKVSDFGMTRYV--LDDEYTSSSGAKFPVKWSPPEVFNFSKYS 179
Query: 944 EKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSN--MITEINQNLDHRLPTPSRDVMDK 1000
K DV SFGVL EV +G P F SN ++ I++ RL P K
Sbjct: 180 SKSDVWSFGVLMWEVFTEGKMP-------FEKKSNYEVVEMISRG--FRLYRP------K 224
Query: 1001 L--MSIMEVAILCLVESPEARPT 1021
L M++ EV C E PE RPT
Sbjct: 225 LASMTVYEVMYSCWHEKPEGRPT 247
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 29/274 (10%)
Query: 767 IGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG G G V++ L + A+K + E QD FL+E + + H NII
Sbjct: 13 IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPG--YTEKQRQD-FLSEASIMGQFSHHNII 69
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ G + + + I++EY++ G+L L+D EF Q + +++G+A + YL
Sbjct: 70 RLEGVVTKFKPAMIITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSD-- 125
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFG--YAAPEIAH 938
VH D++++N+L++S E VSDFG+++ L +P + +T G + APE
Sbjct: 126 -MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGT-YTTSGGKIPIRWTAPEAIA 183
Query: 939 MMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
+ T DV SFG++ EV+ G P + SN N RLP P
Sbjct: 184 YRKFTSASDVWSFGIVMWEVMSFGERP-------YWDMSNHEVMKAINDGFRLPAP---- 232
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
MD ++ ++ + C + RP + NLL K
Sbjct: 233 MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 77/277 (27%), Positives = 119/277 (42%), Gaps = 50/277 (18%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEI 816
EK IG+G G VYKA + +G A+KK + Q++ +NE+L + +
Sbjct: 22 KNLEK--IGEGASGEVYKATDRATGKEVAIKKMR-------LRKQNKELIINEILIMKDC 72
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN------VIKG 870
+H NI+ ++ ++V EY+D GSLT I+ RMN V +
Sbjct: 73 KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIIT--------QNFVRMNEPQIAYVCRE 124
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
V L YLH ++H DI S N+LL + ++DFG A L S + GT
Sbjct: 125 VLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPY 181
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
+ APE+ K D+ S G++ +E+ +G P Y+ + I L
Sbjct: 182 WMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPP--YL--REPPLRALFL-ITTKGIPPL 236
Query: 991 PTPS------RDVMDKLMSIMEVAILCLVESPEARPT 1021
P +D ++K CLV+ PE RP+
Sbjct: 237 KNPEKWSPEFKDFLNK----------CLVKDPEKRPS 263
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 1e-22
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 31/269 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ + I A+K + +D+F+ E + ++ H N+++ +G
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREGAM-----SEDDFIEEAKVMMKLSHPNLVQLYG 66
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
C+ + FIV+EY+ G L L+ + G +++ V A+ YL +
Sbjct: 67 VCTKQRPIFIVTEYMANGCLLNYLR--ERKGKLGTEWLLDMCSDVCEAMEYLESNG---F 121
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D++++N L+ ++ VSDFG+A+++ +T+ GT +A PE+ R +
Sbjct: 122 IHRDLAARNCLVGEDNVVKVSDFGLARYV--LDDQYTSSQGTKFPVKWAPPEVFDYSRFS 179
Query: 944 EKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL- 1001
K DV SFGVL EV +G P + FS+ S ++ ++ RL P KL
Sbjct: 180 SKSDVWSFGVLMWEVFSEGKMPYE----RFSN-SEVVESVSAGY--RLYRP------KLA 226
Query: 1002 -MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ + C E PE RP KK+ + L
Sbjct: 227 PTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 1e-22
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G G V++ + + A+K S D++ Q +F EV AL +RH+++I
Sbjct: 14 LGSGYFGEVWEGLWKNRVRVAIKILKS----DDLLKQQDFQKEVQALKRLRHKHLISLFA 69
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
CS + +I++E +++GSL L+ + +++ VA ++YL
Sbjct: 70 VCSVGEPVYIITELMEKGSLLAFLR-SPEGQVLPVASLIDMACQVAEGMAYLEEQ---NS 125
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLN-----PHSSN----WTAFAGTFGYAAPEIA 937
+H D++++N+L+ + V+DFG+A+ + WT APE A
Sbjct: 126 IHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWT---------APEAA 176
Query: 938 HMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
+ K DV SFG+L E+ G P Y N + IT +R+P P++
Sbjct: 177 SHGTFSTKSDVWSFGILLYEMFTYGQVP--YPGMNNHEVYDQITA-----GYRMPCPAK- 228
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMK 1023
++ IM + C PE RP+ K
Sbjct: 229 CPQEIYKIM---LECWAAEPEDRPSFK 252
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 96.9 bits (242), Expect = 3e-22
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 35/276 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVLALTEI 816
D+ IGKG G+V K G I K+ + + M ++ + ++EV L E+
Sbjct: 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEID----YGNMTEKEKQQLVSEVNILREL 56
Query: 817 RHRNIIKFHGFCSNAQHS--FIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIK 869
+H NI++++ + + +IV EY + G L +++ +EF W ++
Sbjct: 57 KHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWR----ILT 112
Query: 870 GVANALSYLHH--DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
+ AL H+ D ++H D+ N+ LD+ + + DFG+AK L SS + G
Sbjct: 113 QLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVG 172
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN--MITEINQN 985
T Y +PE + M EK D+ S G L E+ + P F++ + + ++I +
Sbjct: 173 TPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPP-------FTARNQLQLASKIKEG 225
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
R+P +++++ L P+ RP+
Sbjct: 226 KFRRIPYRYSSELNEVIK------SMLNVDPDKRPS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 97.3 bits (242), Expect = 6e-22
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)
Query: 755 IKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNE 809
I ++ D +KY IG+G G+VY A ++ +G A+K+ N Q + ++ +NE
Sbjct: 11 IVSVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ----QQPKKELIINE 66
Query: 810 VLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
+L + E +H NI+ + ++V EYL GSLT ++ + + Q V +
Sbjct: 67 ILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCR 122
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
AL +LH + ++H DI S N+LL + ++DFG + P S + GT
Sbjct: 123 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 179
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
+ APE+ K D+ S G++A+E+++G P Y++ N
Sbjct: 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP--YLNEN 219
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 8e-22
Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 30/261 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK M+ + FL E + ++RH +++ +
Sbjct: 14 LGAGQFGEVWMGTWNGTTKVAVKTLKP----GTMSPEA-FLQEAQIMKKLRHDKLVQLYA 68
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
CS + +IV+EY+ +GSL LK K+ Q +++ +A ++YL
Sbjct: 69 VCSEEEPIYIVTEYMSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESRNY--- 124
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D++++N+L+ ++DFG+A+ + +TA G + APE A+ R T
Sbjct: 125 IHRDLAARNILVGENLVCKIADFGLARLI--EDDEYTAREGAKFPIKWTAPEAANYGRFT 182
Query: 944 EKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDK 1000
K DV SFG+L E++ G P + +N E+ + ++ +R+P P + ++
Sbjct: 183 IKSDVWSFGILLTEIVTYGRVP-------YPGMTN--REVLEQVERGYRMPRPP-NCPEE 232
Query: 1001 LMSIMEVAILCLVESPEARPT 1021
L +M + C + PE RPT
Sbjct: 233 LYDLM---LQCWDKDPEERPT 250
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 1e-21
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V + G AVK L D+ FL E +T +RH N+++
Sbjct: 13 TIGKGEFGDVMLGDY-RGQKVAVKC-----LKDDSTAAQAFLAEASVMTTLRHPNLVQLL 66
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G +IV+EY+ +GSL L+ A Q++ V + YL
Sbjct: 67 GVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAV-ITLAQQLGFALDVCEGMEYLEEK---N 122
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAHMMRAT 943
VH D++++NVL+ + A VSDFG+AK ++ +G + APE + +
Sbjct: 123 FVHRDLAARNVLVSEDLVAKVSDFGLAK-----EASQGQDSGKLPVKWTAPEALREKKFS 177
Query: 944 EKYDVHSFGVLALEV 958
K DV SFG+L E+
Sbjct: 178 TKSDVWSFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 94.6 bits (235), Expect = 2e-21
Identities = 78/278 (28%), Positives = 136/278 (48%), Gaps = 35/278 (12%)
Query: 767 IGKGRQGSVYKAEL-PSG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG G G V + L G I A+K S + E +D FL+E + + H NII
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG--YTEKQRRD-FLSEASIMGQFDHPNII 68
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
G + ++ I++E+++ G+L + L+ + +F Q + +++G+A + YL
Sbjct: 69 HLEGVVTKSRPVMIITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSE-- 124
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG------YAAPEI 936
VH D++++N+L++S VSDFG+++FL +S+ T + + G + APE
Sbjct: 125 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT-YTSSLGGKIPIRWTAPEA 182
Query: 937 AHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN--MITEINQNLDHRLPTP 993
+ T DV S+G++ EV+ G P + SN +I I Q D+RLP P
Sbjct: 183 IAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDVINAIEQ--DYRLPPP 233
Query: 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
MD ++ ++ + C + ARP ++ + L K
Sbjct: 234 ----MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 94.2 bits (234), Expect = 3e-21
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+DEF+ E + ++ H +++ +G C+ + +IV+EY+ G L L++ K F +
Sbjct: 43 EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLRE--HGKRFQPS 100
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q + + K V ++YL +H D++++N L+D + VSDFG+++++ +
Sbjct: 101 QLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYV--LDDEY 155
Query: 923 TAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T+ G+ ++ PE+ + + K DV +FGVL EV G P + F+N
Sbjct: 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMP-------YERFNNS 208
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
T + RL P +K+ +IM C E E RPT +++
Sbjct: 209 ETVEKVSQGLRLYRPHL-ASEKVYAIMYS---CWHEKAEERPTFQQL 251
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 4e-21
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 18/210 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ-----DEFLNEVLALTEIRHRN 820
IG G GSVY SG + AVK+ + D+ D E+ L E++H N
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
I+++ G +A H I EY+ GS+ +L + A +E N ++ + L+YLH+
Sbjct: 68 IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEE---TLVRNFVRQILKGLNYLHN 124
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT------AFAGTFGYAAP 934
I+H DI N+L+D++ +SDFGI+K L +S + + G+ + AP
Sbjct: 125 R---GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP 181
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E+ T K D+ S G L +E++ G HP
Sbjct: 182 EVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 94.4 bits (234), Expect = 6e-21
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 755 IKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNE 809
I +I D +KY IG+G G+V+ A ++ +G A+K+ N Q + ++ +NE
Sbjct: 11 IVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ----KQPKKELIINE 66
Query: 810 VLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
+L + E+++ NI+ F F+V EYL GSLT ++ + + Q V +
Sbjct: 67 ILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEA----QIAAVCR 122
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
AL +LH + ++H DI S NVLL + ++DFG + P S + GT
Sbjct: 123 ECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 179
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
+ APE+ K D+ S G++A+E+++G P Y++ N
Sbjct: 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP--YLNEN 219
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 96.0 bits (237), Expect = 7e-21
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 20/270 (7%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKFH 825
+G+G G VY A + A+K +L + FL E+ L + H NI+K +
Sbjct: 8 LGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVER-FLREIQILASLNHPPNIVKLY 64
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
F + ++V EY+D GSL +LK ++ + ++ + +AL YLH
Sbjct: 65 DFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG--- 121
Query: 886 IVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSN------WTAFAGTFGYAAPEIAH 938
I+H DI +N+LLD + + DFG+AK L S + GT GY APE+
Sbjct: 122 IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLL 181
Query: 939 MM---RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ A+ D+ S G+ E++ G P + N S+ S + I + L +P
Sbjct: 182 GLSLAYASSSSDIWSLGITLYELLTGLPPFE-GEKNSSATSQTLKIILELPTPSLASPLS 240
Query: 996 DVMDKLMSIMEVAIL--CLVESPEARPTMK 1023
+L+S +L L + P+ R +
Sbjct: 241 PSNPELISKAASDLLKKLLAKDPKNRLSSS 270
|
Length = 384 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 3e-20
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
DF IGKG G V+K + ++A+K+ + + +++E ++E L ++
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM--NRREREEAIDEARVLAKLDS 58
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAA---AKEFGWNQRMNVIKGVANAL 875
II+++ + IV EY + G L +LK ++ W + ++ G L
Sbjct: 59 SYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG----L 114
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
++LH I+H DI S N+ LD+ + D G+AK L+ +++ GT Y +PE
Sbjct: 115 AHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPE 171
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRD 966
+ EK DV + GV+ E G HP D
Sbjct: 172 LCEDKPYNEKSDVWALGVVLYECCTGKHPFD 202
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 91.1 bits (227), Expect = 4e-20
Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 37/268 (13%)
Query: 766 CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLN-EVLALTEIRHRNIIK 823
CIGKG G VYKA + + + A+K + +E D+ E + E+ L++ R I K
Sbjct: 8 CIGKGSFGEVYKAIDKRTNQVVAIKVID----LEEAEDEIEDIQQEIQFLSQCRSPYITK 63
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
++G +I+ EY GS +LK + +++ V L YLH +
Sbjct: 64 YYGSFLKGSKLWIIMEYCGGGSCLDLLK----PGKLDETYIAFILREVLLGLEYLHEEGK 119
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT 943
+H DI + N+LL E + ++DFG++ L S F GT + APE+
Sbjct: 120 ---IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYD 176
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--ITEINQN----LDHRLPTPS-RD 996
EK D+ S G+ A+E+ KG P S M + I +N L+ + +D
Sbjct: 177 EKADIWSLGITAIELAKGEPPL-------SDLHPMRVLFLIPKNNPPSLEGNKFSKPFKD 229
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKK 1024
+ LCL + P+ RP+ K+
Sbjct: 230 FVS----------LCLNKDPKERPSAKE 247
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 6e-20
Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 30/261 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V++ + AVK M D +FL E + ++RH +I+ +
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKP----GTM-DPKDFLAEAQIMKKLRHPKLIQLYA 68
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
C+ + +IV+E + GSL L+ A + Q +++ VA+ ++YL
Sbjct: 69 VCTLEEPIYIVTELMKYGSLLEYLQGG-AGRALKLPQLIDMAAQVASGMAYLE---AQNY 124
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D++++NVL+ + V+DFG+A+ + + A G + APE A R +
Sbjct: 125 IHRDLAARNVLVGENNICKVADFGLARVIK--EDIYEAREGAKFPIKWTAPEAALYNRFS 182
Query: 944 EKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH--RLPTPSRDVMDK 1000
K DV SFG+L E++ G P + +N E+ Q +D R+P P +
Sbjct: 183 IKSDVWSFGILLTEIVTYGRMP-------YPGMTN--AEVLQQVDQGYRMPCPP-GCPKE 232
Query: 1001 LMSIMEVAILCLVESPEARPT 1021
L IM + C E P+ RPT
Sbjct: 233 LYDIM---LDCWKEDPDDRPT 250
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 6e-20
Identities = 74/263 (28%), Positives = 112/263 (42%), Gaps = 17/263 (6%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G V K P+G I AVK +L +E A Q + L E+ L + I+ F+
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTI--RLEINE-AIQKQILRELDILHKCNSPYIVGFY 65
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G N I EY+D GSL ILK+ + V L+YLH
Sbjct: 66 GAFYNNGDISICMEYMDGGSLDKILKE--VQGRIPERILGKIAVAVLKGLTYLHEKH--K 121
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
I+H D+ N+L++S + + DFG++ L +S F GT Y APE + K
Sbjct: 122 IIHRDVKPSNILVNSRGQIKLCDFGVSGQLV--NSLAKTFVGTSSYMAPERIQGNDYSVK 179
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE-INQNLDHRLPTPSRDVMDKLMSI 1004
D+ S G+ +E+ G P Y N + I E + ++ P
Sbjct: 180 SDIWSLGLSLIELATGRFP--YPPEN--DPPDGIFELLQYIVNEPPPRLPSGKFSPDFQ- 234
Query: 1005 MEVAILCLVESPEARPTMKKVCN 1027
+ LCL++ P RP+ K++
Sbjct: 235 -DFVNLCLIKDPRERPSYKELLE 256
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 90.1 bits (224), Expect = 9e-20
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 34/268 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG G G VY A L +G + AVK+ Q + + +E+ L ++H N++K++
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIA--DEMKVLELLKHPNLVKYY 65
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN----ALSYLHHD 881
G + + +I EY G+L +L E G +VI+ L+YLH
Sbjct: 66 GVEVHREKVYIFMEYCSGGTLEELL-------EHGRILDEHVIRVYTLQLLEGLAYLHSH 118
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAAPEIA 937
IVH DI N+ LD + DFG A L ++ + AGT Y APE+
Sbjct: 119 ---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVI 175
Query: 938 HMMRATEKY---DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ D+ S G + LE+ G P + F ++ H+ P P
Sbjct: 176 TGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHV------GAGHKPPIPD 229
Query: 995 RDVMDKL-MSIMEVAILCLVESPEARPT 1021
+ ++ CL P+ RPT
Sbjct: 230 SLQLSPEGKDFLD---RCLESDPKKRPT 254
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 90.9 bits (225), Expect = 9e-20
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)
Query: 755 IKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNE 809
I ++ D +KY IG+G G+VY A ++ +G A+K+ N Q + ++ +NE
Sbjct: 11 IVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ----QQPKKELIINE 66
Query: 810 VLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
+L + E ++ NI+ + ++V EYL GSLT ++ + + Q V +
Sbjct: 67 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCR 122
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
AL +LH + ++H DI S N+LL + ++DFG + P S + GT
Sbjct: 123 ECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 179
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
+ APE+ K D+ S G++A+E+++G P Y++ N
Sbjct: 180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP--YLNEN 219
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 89.8 bits (222), Expect = 2e-19
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)
Query: 755 IKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNE 809
I ++ D +KY IG+G G+VY A ++ +G A+++ N Q + ++ +NE
Sbjct: 12 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINE 67
Query: 810 VLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
+L + E ++ NI+ + ++V EYL GSLT ++ + + Q V +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCR 123
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
AL +LH + ++H DI S N+LL + ++DFG + P S + GT
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 180
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
+ APE+ K D+ S G++A+E+I+G P Y++ N
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNEN 220
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 5e-19
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 33/276 (11%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+ F +G+G GSVYKA +G + A+K + D E + E+ L +
Sbjct: 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE------EDLQEIIKEISILKQCD 56
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
I+K++G +IV EY GS++ I+K K + ++ L Y
Sbjct: 57 SPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMK--ITNKTLTEEEIAAILYQTLKGLEY 114
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH +H DI + N+LL+ E +A ++DFG++ L + GT + APE+
Sbjct: 115 LH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVI 171
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR-- 995
+ K D+ S G+ A+E+ +G P ++ + I L P +
Sbjct: 172 QEIGYNNKADIWSLGITAIEMAEGKPPY----SDIHPMRAIFM-IPNKPPPTLSDPEKWS 226
Query: 996 ----DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
D + K CLV+ PE RP+ ++
Sbjct: 227 PEFNDFVKK----------CLVKDPEERPSAIQLLQ 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 4e-18
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 767 IGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQ--DEFLNEVLALTEIRHR 819
+G G G+VYK +P G I A+K +L +E + + E L+E + + H
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIK-----VLREETSPKANKEILDEAYVMASVDHP 69
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL- 878
++++ G C ++Q ++++ + G L +++ G +N +A +SYL
Sbjct: 70 HVVRLLGICLSSQVQ-LITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLE 126
Query: 879 -HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT--FGYAAPE 935
+VH D++++NVL+ + ++DFG+AK L+ + A G + A E
Sbjct: 127 EKR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALE 181
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH--RLPT 992
T K DV S+GV E++ G P + + EI L+ RLP
Sbjct: 182 SILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA---------VEIPDLLEKGERLPQ 232
Query: 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
P +D M V + C + E+RPT K++ N K
Sbjct: 233 PPICTIDVYM----VLVKCWMIDAESRPTFKELINEFSK 267
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 6e-18
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+D+ IG G G VYKA ++ +G + A+K + + D + E+ L E R
Sbjct: 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIK----VIKLEPGDDFEIIQQEISMLKECR 58
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMNVIKGVANALS 876
H NI+ + G +IV EY GSL I + E Q V + L+
Sbjct: 59 HPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSE---LQIAYVCRETLKGLA 115
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH +H DI N+LL + + ++DFG++ L + +F GT + APE+
Sbjct: 116 YLHETGK---IHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEV 172
Query: 937 AHMMRA---TEKYDVHSFGVLALEVIKGNHPR 965
A + R K D+ + G+ A+E+ + P
Sbjct: 173 AAVERKGGYDGKCDIWALGITAIELAELQPPM 204
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 84.2 bits (208), Expect = 9e-18
Identities = 74/274 (27%), Positives = 132/274 (48%), Gaps = 29/274 (10%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
IG G G V + +LP V + + E +D FL+E + + H NII
Sbjct: 12 IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRD-FLSEASIMGQFDHPNIIHL 70
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+EY++ GSL L+ +F Q + +++G+A+ + YL
Sbjct: 71 EGVVTKSKPVMIVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSD---M 125
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFG--YAAPEIAHMM 940
VH D++++N+L++S VSDFG+++ L +P ++ +T G + APE
Sbjct: 126 GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAYR 184
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN--MITEINQNLDHRLPTPSRDV 997
+ T DV S+G++ EV+ G P + SN +I I + +RLP P
Sbjct: 185 KFTSASDVWSYGIVMWEVMSYGERP-------YWEMSNQDVIKAIEEG--YRLPAP---- 231
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
MD ++ ++ + C + RP +++ ++L K
Sbjct: 232 MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 83.6 bits (206), Expect = 2e-17
Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 22/260 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V+K + + + A+K + + DE+ D + E+ L++ + K++
Sbjct: 12 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 68
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G +I+ EYL GS +L+ A F Q ++K + L YLH +
Sbjct: 69 GSYLKGTKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSE---K 121
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H DI + NVLL + + ++DFG+A L F GT + APE+ K
Sbjct: 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 181
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
D+ S G+ A+E+ KG P S+M L + P+ +
Sbjct: 182 ADIWSLGITAIELAKGEPPN----------SDMHPMRVLFLIPKNNPPTL-TGEFSKPFK 230
Query: 1006 EVAILCLVESPEARPTMKKV 1025
E CL + P RPT K++
Sbjct: 231 EFIDACLNKDPSFRPTAKEL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 5e-17
Identities = 74/271 (27%), Positives = 111/271 (40%), Gaps = 45/271 (16%)
Query: 767 IGKGRQGSVYKA--ELPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G GSV K + SG + AVK + A + EFL E + ++ H I+
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQE---HIAAGKKEFLREASVMAQLDHPCIV 59
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVANALS 876
+ G C + +V E G L LK + + V VA ++
Sbjct: 60 RLIGVCK-GEPLMLVMELAPLGPLLKYLKK---------RREIPVSDLKELAHQVAMGMA 109
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG---TFGYAA 933
YL VH D++++NVLL + H+A +SDFG+++ L S + A + A
Sbjct: 110 YLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYA 166
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLD--HRL 990
PE + + + K DV S+GV E G P + E+ L+ RL
Sbjct: 167 PECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---------EVIAMLESGERL 217
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
P P ++ SIM C PE RPT
Sbjct: 218 PRPEE-CPQEIYSIML---SCWKYRPEDRPT 244
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 81.1 bits (200), Expect = 9e-17
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G+ G V+ A+K + +E +F+ E + ++ H +++ +G
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEE-----DFIEEAQVMMKLSHPKLVQLYG 66
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
C+ +V E+++ G L+ L+ A +F + + V ++YL +
Sbjct: 67 VCTERSPICLVFEFMEHGCLSDYLR--AQRGKFSQETLLGMCLDVCEGMAYLESSN---V 121
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D++++N L+ VSDFG+ +F+ +T+ GT +++PE+ + +
Sbjct: 122 IHRDLAARNCLVGENQVVKVSDFGMTRFV--LDDQYTSSTGTKFPVKWSSPEVFSFSKYS 179
Query: 944 EKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
K DV SFGVL EV +G P + S S ++ IN RL P +L
Sbjct: 180 SKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVETINAG--FRLYKP------RLA 226
Query: 1003 S--IMEVAILCLVESPEARPT 1021
S + E+ C E PE RP+
Sbjct: 227 SQSVYELMQHCWKERPEDRPS 247
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 1e-16
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G GSV K + +P+G + A K + + + + + L E+ + E R I+ F+
Sbjct: 13 LGAGNGGSVSKVKHIPTGTVMAKK---VVHIGAKSSVRKQILRELQIMHECRSPYIVSFY 69
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA----LSYL--- 878
G N + + E++D GSL D K+ G + ++ +A A L+YL
Sbjct: 70 GAFLNENNICMCMEFMDCGSL------DRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNV 122
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA-KFLNPHSSNWTAFAGTFGYAAPEIA 937
H I+H DI N+L++S + + DFG++ + +N S F GT Y +PE
Sbjct: 123 HR-----IMHRDIKPSNILVNSRGQIKLCDFGVSGELIN---SIADTFVGTSTYMSPERI 174
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHP------RDYVSTNFSSFSNMITEINQNLDHRLP 991
+ T K DV S G+ +E+ G P D + +++ +I Q RLP
Sbjct: 175 QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP 234
Query: 992 TPSRDVMDKLMSIMEVAI-LCLVESPEARPTMKKVC 1026
+ + + CL++ P RPT +++C
Sbjct: 235 S------SDFPEDLRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 2e-16
Identities = 76/269 (28%), Positives = 121/269 (44%), Gaps = 35/269 (13%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFN------SQLLFDEMADQDEFLNEVLALTEIRHR 819
IG+G G V A + +G AVKK + +LLF NEV+ + + +H
Sbjct: 27 IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLF----------NEVVIMRDYQHP 76
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
NI++ + ++V E+L+ G+LT I+ +E Q V V ALS+LH
Sbjct: 77 NIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIATVCLAVLKALSFLH 132
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAH 938
++H DI S ++LL S+ +SDFG ++ + GT + APE I+
Sbjct: 133 AQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISR 189
Query: 939 MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
+ TE D+ S G++ +E++ G P N M I NL +L + V
Sbjct: 190 LPYGTE-VDIWSLGIMVIEMVDGEPPY----FNEPPLQAM-KRIRDNLPPKLKNLHK-VS 242
Query: 999 DKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+L S ++ LV P R T ++ N
Sbjct: 243 PRLRSFLD---RMLVRDPAQRATAAELLN 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 2e-16
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 30/266 (11%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG GSVYK + L +A+K+ + + ++++ +NE+ L + H NII +
Sbjct: 8 LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ--KEREDAVNEIRILASVNHPNIISYK 65
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK-----EFGWNQRMNVIKGVANALSYLHH 880
+ IV EY G L+ + + + W + +++G L LH
Sbjct: 66 EAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRG----LQALHE 121
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
I+H D+ S N+LL + + D GI+K L + + GT Y APE+
Sbjct: 122 Q---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK--TQIGTPHYMAPEVWKGR 176
Query: 941 RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP-TPSRDVMD 999
+ K D+ S G L E+ P S ++ ++ + +P S+D+ +
Sbjct: 177 PYSYKSDIWSLGCLLYEMATFAPP-----FEARSMQDLRYKVQRGKYPPIPPIYSQDLQN 231
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKV 1025
+ S+++V P+ RP K+
Sbjct: 232 FIRSMLQV-------KPKLRPNCDKI 250
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 80.0 bits (197), Expect = 2e-16
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 31/269 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + E FL E + ++RH +++ +
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPE-----SFLEEAQIMKKLRHDKLVQLYA 68
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LKD + +++ VA ++Y+
Sbjct: 69 VVSE-EPIYIVTEYMSKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIER---MNY 123
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ S N+L+ ++DFG+A+ + + +TA G + APE A R T
Sbjct: 124 IHRDLRSANILVGDGLVCKIADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 181
Query: 944 EKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDK 1000
K DV SFG+L E++ KG P + +N E+ + ++ +R+P P D
Sbjct: 182 IKSDVWSFGILLTELVTKGRVP-------YPGMNN--REVLEQVERGYRMPCPQ----DC 228
Query: 1001 LMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+S+ E+ + C + PE RPT + + + L
Sbjct: 229 PISLHELMLQCWKKDPEERPTFEYLQSFL 257
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 2e-16
Identities = 70/253 (27%), Positives = 106/253 (41%), Gaps = 29/253 (11%)
Query: 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IGKG G V + + +FA+K N Q E LNE L E+ H ++
Sbjct: 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC-VEKGSVRNVLNERRILQELNHPFLVN 64
Query: 824 FH-GFCSNAQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKGVANALSY 877
F ++ ++V + L G L L + K + I + AL Y
Sbjct: 65 LWYSFQDE-ENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFW--------ICEIVLALEY 115
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH I+H DI N+LLD + H++DF IA + P + T+ +GT GY APE+
Sbjct: 116 LHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTP-DTLTTSTSGTPGYMAPEV- 170
Query: 938 HMMRATEKY--DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP-TPS 994
+ R D S GV A E ++G P S + + I + D P T S
Sbjct: 171 -LCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS---RTIRDQIRAKQETADVLYPATWS 226
Query: 995 RDVMDKLMSIMEV 1007
+ +D + ++E
Sbjct: 227 TEAIDAINKLLER 239
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 79.7 bits (196), Expect = 2e-16
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 68
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 69 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 123
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 124 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 181
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 182 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 227
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 228 CPESLHDLMCQCWRKEPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 5e-16
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK D M +EFL E + EI+H
Sbjct: 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTME-VEEFLKEAAVMKEIKH 61
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 62 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 120
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 121 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 175
Query: 936 IAHMMRATEKYDVHSFGVLALEV 958
+ + K DV +FGVL E+
Sbjct: 176 SLAYNKFSIKSDVWAFGVLLWEI 198
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 5e-16
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 23/246 (9%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G V ++ FA+K + + + Q+ +E L E H I+K +
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQ-QEHIFSEKEILEECNHPFIVKLY 59
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKD----DAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+ ++ +++ EY G L TIL+D D F I V A YLH+
Sbjct: 60 RTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARF-------YIACVVLAFEYLHNR 112
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
I++ D+ +N+LLDS + DFG AK L WT F GT Y APEI
Sbjct: 113 ---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT-FCGTPEYVAPEIILNKG 168
Query: 942 ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS--NMITEINQNLD--HRLPTPSRDV 997
D S G+L E++ G P + + N I + N L+ + + ++D+
Sbjct: 169 YDFSVDYWSLGILLYELLTGRPP--FGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDL 226
Query: 998 MDKLMS 1003
+ +L+
Sbjct: 227 IKQLLR 232
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 5e-16
Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 40/283 (14%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G+G G V +G AVK N +D F E+ L + H NI
Sbjct: 12 LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSD---FEREIEILRTLDHENI 68
Query: 822 IKFHGFCSNAQHSF---IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
+K+ G ++ EYL GSL L+ + + + + + YL
Sbjct: 69 VKYKG-VCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYL 125
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF----AGTFGYAAP 934
+H D++++N+L++SE +SDFG+AK L + + F Y AP
Sbjct: 126 GSQRY---IHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY-AP 181
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD------- 987
E + + DV SFGV E+ P F +
Sbjct: 182 ECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241
Query: 988 -HRLPTPSR---DVMDKLMSIMEVAILCLVESPEARPTMKKVC 1026
RLP P +V D LM LC P+ RP+ +
Sbjct: 242 GERLPRPPSCPDEVYD-LMK------LCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 77.8 bits (191), Expect = 1e-15
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 33/270 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH ++ +
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPE-----AFLQEAQIMKKLRHDKLVPLYA 68
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+E++ +GSL LK+ K Q +++ +A+ ++Y+
Sbjct: 69 VVSE-EPIYIVTEFMGKGSLLDFLKE-GDGKYLKLPQLVDMAAQIADGMAYIER---MNY 123
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + +TA G + APE A R T
Sbjct: 124 IHRDLRAANILVGDNLVCKIADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 181
Query: 944 EKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E++ KG P + M+ E+ + ++ +R+P P + +
Sbjct: 182 IKSDVWSFGILLTELVTKGRVP----------YPGMVNREVLEQVERGYRMPCP-QGCPE 230
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
L +M+ LC + P+ RPT + + + L
Sbjct: 231 SLHELMK---LCWKKDPDERPTFEYIQSFL 257
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 78.2 bits (192), Expect = 2e-15
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 23/261 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A E +G AVKK + + ++ NEV+ + + H N++ +
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMD----LRKQQRRELLFNEVVIMRDYHHENVVDMY 85
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V E+L+ G+LT I+ +E Q V V ALSYLH+
Sbjct: 86 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIATVCLSVLRALSYLHNQ---G 138
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL S+ +SDFG ++ + GT + APE+ + +
Sbjct: 139 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTE 198
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
D+ S G++ +E+I G P F+ + + + LP +D K+ S++
Sbjct: 199 VDIWSLGIMVIEMIDGEPP---------YFNEPPLQAMRRIRDNLPPRVKD-SHKVSSVL 248
Query: 1006 EVAI-LCLVESPEARPTMKKV 1025
+ L LV P R T +++
Sbjct: 249 RGFLDLMLVREPSQRATAQEL 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 77.8 bits (191), Expect = 2e-15
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 34/266 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G VYK + + + A+K + + DE+ D + E+ L++ I +++
Sbjct: 12 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYITRYY 68
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G +I+ EYL GS +LK + + ++KG L YLH +
Sbjct: 69 GSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKG----LDYLHSE---R 121
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H DI + NVLL + + ++DFG+A L F GT + APE+ K
Sbjct: 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFK 181
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--ITEINQN----LDHRLPTPSRDVMD 999
D+ S G+ A+E+ KG P S M + I +N L+ + P ++ ++
Sbjct: 182 ADIWSLGITAIELAKGEPP-------NSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVE 234
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKV 1025
CL + P RPT K++
Sbjct: 235 A----------CLNKDPRFRPTAKEL 250
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 77.4 bits (190), Expect = 2e-15
Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 22/260 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V+K + + + A+K + + DE+ D + E+ L++ + K++
Sbjct: 12 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 68
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G +I+ EYL GS +L+ + Q +++ + L YLH +
Sbjct: 69 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHSE---K 121
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H DI + NVLL E ++DFG+A L F GT + APE+ K
Sbjct: 122 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 181
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
D+ S G+ A+E+ KG P + F +I + N PT + L +
Sbjct: 182 ADIWSLGITAIELAKGEPPHSELHPMKVLF--LIPKNNP------PTLEGNYSKPLKEFV 233
Query: 1006 EVAILCLVESPEARPTMKKV 1025
E CL + P RPT K++
Sbjct: 234 EA---CLNKEPSFRPTAKEL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 2e-15
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 34/212 (16%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG G V + +G ++A+K + + + + L E L+ I H I+K H
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR-KEVEHTLTERNILSRINHPFIVKLH 59
Query: 826 GFCS--NAQHSFIVSEYLDRGSLTTILK-----DDAAAK----EFGWNQRMNVIKGVANA 874
+ + ++V EY G L + L + A+ E + A
Sbjct: 60 --YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAE------------IVLA 105
Query: 875 LSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYA 932
L YLH I++ D+ +N+LLD++ ++DFG+AK + S T F GT Y
Sbjct: 106 LEYLHSLG----IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT-FCGTPEYL 160
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ + D S GVL E++ G P
Sbjct: 161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPP 192
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 3e-15
Identities = 63/268 (23%), Positives = 123/268 (45%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ A+K + + FL E + +++H +++ +
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-----SPEAFLAEANLMKQLQHPRLVRLYA 68
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK K N+ +++ +A ++++
Sbjct: 69 VVTQ-EPIYIITEYMENGSLVDFLKTPEGIK-LTINKLIDMAAQIAEGMAFIERK---NY 123
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 124 IHRDLRAANILVSETLCCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFT 181
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ Y + +N E+ QNL+ +R+P P +
Sbjct: 182 IKSDVWSFGILLTEIVT------YGRIPYPGMTN--PEVIQNLERGYRMPRPDNCPEE-- 231
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ E+ LC E PE RPT + + ++L
Sbjct: 232 --LYELMRLCWKEKPEERPTFEYLRSVL 257
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 4e-15
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 27/275 (9%)
Query: 767 IGKGRQGSVYKAEL--PSGIIFAVKKFNSQLLFD--EMADQDE----FLNEVLALTE-IR 817
+G G G VYK + A+K+ N + ++D+ ++EV + E +R
Sbjct: 8 LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM-NVIKGVANALS 876
H NI++++ +IV + ++ L K+ +R+ N+ + AL
Sbjct: 68 HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALR 127
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH + IVH D++ N++L + + ++DFG+AK P S T+ GT Y+ PEI
Sbjct: 128 YLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK-LTSVVGTILYSCPEI 184
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP--TPS 994
EK DV +FG + ++ P + STN S + T+I + + LP S
Sbjct: 185 VKNEPYGEKADVWAFGCILYQMCTLQPP--FYSTNMLS---LATKIVEAVYEPLPEGMYS 239
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
DV D + S CL EARP + +V ++
Sbjct: 240 EDVTDVITS-------CLTPDAEARPDIIQVSAMI 267
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 75.8 bits (186), Expect = 6e-15
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKG G V + G AVK + A FL E +T++RH N+++ G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 827 FCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +IV+EY+ +GSL L+ + G + + V A+ YL +
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEANNF-- 123
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
VH D++++NVL+ ++ A VSDFG+ K SS + APE + + K
Sbjct: 124 -VHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 946 YDVHSFGVLALEV 958
DV SFG+L E+
Sbjct: 180 SDVWSFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 76.2 bits (187), Expect = 6e-15
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 25/262 (9%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A E SG AVK + + ++ NEV+ + + +H+N+++ +
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMD----LRKQQRRELLFNEVVIMRDYQHQNVVEMY 84
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +++ E+L G+LT I+ +E Q V + V AL YLH
Sbjct: 85 KSYLVGEELWVLMEFLQGGALTDIVSQTRLNEE----QIATVCESVLQALCYLHSQ---G 137
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL + +SDFG ++ + GT + APE+ +
Sbjct: 138 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTE 197
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKLMS 1003
D+ S G++ +E++ G P + + + + L H++ RD ++++
Sbjct: 198 VDIWSLGIMVIEMVDGEPPY-FSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERM-- 254
Query: 1004 IMEVAILCLVESPEARPTMKKV 1025
L P+ R T +++
Sbjct: 255 --------LTREPQERATAQEL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 75.8 bits (186), Expect = 9e-15
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A + SG + AVKK + + ++ NEV+ + + +H N+++ +
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V E+L+ G+LT I+ +E Q V V ALS LH
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLKALSVLHAQ---G 136
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL + +SDFG ++ + GT + APE+ + +
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPE 196
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G++ +E++ G P
Sbjct: 197 VDIWSLGIMVIEMVDGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 9e-15
Identities = 69/264 (26%), Positives = 109/264 (41%), Gaps = 20/264 (7%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G+ VY+A L G+ A+KK L D A D + E+ L ++ H N+IK++
Sbjct: 10 IGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKYY 68
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM----NVIKGVANALSYLHHD 881
IV E D G L+ ++K F +R+ V K S L H
Sbjct: 69 ASFIEDNELNIVLELADAGDLSRMIK------HFKKQKRLIPEKTVWKYFVQLCSALEHM 122
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
++H DI NV + + + D G+ +F + ++ + GT Y +PE H
Sbjct: 123 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 182
Query: 942 ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL 1001
K D+ S G L E+ P N S I + + P PS ++L
Sbjct: 183 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP-----PLPSDHYSEEL 237
Query: 1002 MSIMEVAILCLVESPEARPTMKKV 1025
++ +C+ PE RP + V
Sbjct: 238 RQLVN---MCINPDPEKRPDITYV 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 1e-14
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D+ GE+ +GKG G VY A +L + + A+K+ + + E+ + ++
Sbjct: 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER----DSRYVQPLHEEIALHSYLK 63
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
HRNI+++ G S I E + GSL+ +L+ + + K + L Y
Sbjct: 64 HRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKY 123
Query: 878 LHHDCLPPIVHGDISSKNVLLDS-EHEAHVSDFGIAKFL---NPHSSNWTAFAGTFGYAA 933
LH + IVH DI NVL+++ +SDFG +K L NP + F GT Y A
Sbjct: 124 LHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTE---TFTGTLQYMA 177
Query: 934 PE-IAHMMRATEK-YDVHSFGVLALEVIKGNHP 964
PE I R D+ S G +E+ G P
Sbjct: 178 PEVIDKGPRGYGAPADIWSLGCTIVEMATGKPP 210
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 1e-14
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 33/268 (12%)
Query: 767 IGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V+ L + AVK L D + +FL E L + H NI++
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRLI 59
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G C+ Q +IV E + G T L+ + + + +++ A + YL
Sbjct: 60 GVCTQKQPIYIVMELVQGGDFLTFLRTEGP--RLKVKELIQMVENAAAGMEYLESKH--- 114
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-------YAAPEIAH 938
+H D++++N L+ ++ +SDFG+++ +A T G + APE +
Sbjct: 115 CIHRDLAARNCLVTEKNVLKISDFGMSR-----EEEDGVYASTGGMKQIPVKWTAPEALN 169
Query: 939 MMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R + + DV SFG+L E G P +++ SN T RLP P
Sbjct: 170 YGRYSSESDVWSFGILLWEAFSLGAVP-------YANLSNQQTREAIEQGVRLPCPE-LC 221
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKV 1025
D + +ME C P RP+ V
Sbjct: 222 PDAVYRLME---RCWEYDPGQRPSFSTV 246
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 1e-14
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 26/267 (9%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ + AVK M+ Q FL E + ++H +++ +
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTLKP----GTMSVQ-AFLEEANLMKTLQHDKLVRLYA 68
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY+ +GSL LK D K + ++ +A ++Y+
Sbjct: 69 VVTKEEPIYIITEYMAKGSLLDFLKSDEGGK-VLLPKLIDFSAQIAEGMAYIERK---NY 124
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + NVL+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 125 IHRDLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFT 182
Query: 944 EKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
K DV SFG+L E++ G P +S S++++ + + +R+P + D+L
Sbjct: 183 IKSDVWSFGILLYEIVTYGKIPYPGMSN-----SDVMSALQRG--YRMPRM-ENCPDELY 234
Query: 1003 SIMEVAILCLVESPEARPTMKKVCNLL 1029
IM+ C E E RPT + ++L
Sbjct: 235 DIMK---TCWKEKAEERPTFDYLQSVL 258
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 1e-14
Identities = 37/90 (41%), Positives = 53/90 (58%)
Query: 129 ALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGR 188
L L N L G IP +I L L+ + N + G+IP +G ++ + VL L +N+F+G
Sbjct: 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS 481
Query: 189 IPPSLGNLSNLAYLYLNNNSLFGSIPNVMG 218
IP SLG L++L L LN NSL G +P +G
Sbjct: 482 IPESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 1e-14
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 23/268 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G G S Y+A ++ +G + AVK + ++ + E+ + + H +II+
Sbjct: 8 LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR 67
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
G H + E++ GS++ +L A KE +N + + LSYLH +
Sbjct: 68 MLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKE---AVIINYTEQLLRGLSYLHEN-- 122
Query: 884 PPIVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFA----GTFGYAAPEIAH 938
I+H D+ N+L+DS ++DFG A L + F GT + APE+
Sbjct: 123 -QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLR 181
Query: 939 MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
+ DV S G + +E+ P + + S+ +I +I T + +
Sbjct: 182 GEQYGRSCDVWSVGCVIIEMATAKPP--WNAEKHSNHLALIFKIAS------ATTAPSIP 233
Query: 999 DKLM-SIMEVAILCLVESPEARPTMKKV 1025
+ L + +V + CL PE RP +++
Sbjct: 234 EHLSPGLRDVTLRCLELQPEDRPPSREL 261
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 2e-14
Identities = 71/267 (26%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 767 IGKGRQGSVYKAEL--PSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G G V + E G I AVK S L D M D+FL E + + H N+I
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIM---DDFLKEAAIMHSLDHENLI 59
Query: 823 KFHGFCSNAQHSF-IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+ +G H +V+E GSL L+ DA F + + +AN + YL
Sbjct: 60 RLYGVV--LTHPLMMVTELAPLGSLLDRLRKDALG-HFLISTLCDYAVQIANGMRYLE-- 114
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAH 938
+H D++++N+LL S+ + + DFG+ + L + ++ F + APE
Sbjct: 115 -SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLR 173
Query: 939 MMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLD---HRLPTPS 994
+ DV FGV E+ G P + + S +I + +D RL P
Sbjct: 174 TRTFSHASDVWMFGVTLWEMFTYGEEP--WAGLSGS-------QILKKIDKEGERLERPE 224
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPT 1021
I V + C +P RPT
Sbjct: 225 ----ACPQDIYNVMLQCWAHNPADRPT 247
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMAD-QDEFLNEVLALTEIRHRNIIKF 824
+G+G GSV K L +G+IFA+K + D D Q + L E+ + I+K+
Sbjct: 9 LGEGAGGSVTKCRLKNTGMIFALKTITT----DPNPDLQKQILRELEINKSCKSPYIVKY 64
Query: 825 HGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN------VIKGVANALS 876
+G + S I EY + GSL +I K K+ G R+ + + V LS
Sbjct: 65 YGAFLDESSSSIGIAMEYCEGGSLDSIYKK---VKKRG--GRIGEKVLGKIAESVLKGLS 119
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH I+H DI N+LL + + + DFG++ L +S F GT Y APE
Sbjct: 120 YLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV--NSLAGTFTGTSFYMAPER 174
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ DV S G+ LEV + P
Sbjct: 175 IQGKPYSITSDVWSLGLTLLEVAQNRFP 202
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 3e-14
Identities = 77/308 (25%), Positives = 126/308 (40%), Gaps = 59/308 (19%)
Query: 753 EIIKAIDDFGEKYCIGKGRQGSVYKAEL--PSG----IIFAVKKFNSQLLFDEMADQDEF 806
EI + F E+ +G+G G VYK EL P+ A+K E Q EF
Sbjct: 1 EIPLSAVRFLEE--LGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN---AEPKVQQEF 55
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTIL-------------KDD 853
E +++++H NI+ G C+ Q + ++ EYL G L L D+
Sbjct: 56 RQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDE 115
Query: 854 AAAKEFGWNQRMNVIKGVANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911
+ +++ +A + YL HH VH D++++N L+ +SDFG+
Sbjct: 116 TVKSSLDCSDFLHIAIQIAAGMEYLSSHH-----FVHRDLAARNCLVGEGLTVKISDFGL 170
Query: 912 AKFLNPHSSNWTAFAGT----FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRD 966
++ + +S+++ + PE + T + D+ SFGV+ E+ G P
Sbjct: 171 SRDI--YSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP-- 226
Query: 967 YVSTNFSSFSN-----MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
+ FSN MI LP P D ++ ++M I C E P RP
Sbjct: 227 -----YYGFSNQEVIEMIRS-----RQLLPCPE-DCPARVYALM---IECWNEIPARRPR 272
Query: 1022 MKKVCNLL 1029
K + L
Sbjct: 273 FKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 4e-14
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 34/272 (12%)
Query: 767 IGKGRQGSVYKA-ELPSG-------IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G G G+V+K +P G I ++ + + F E+ D +LA+ + H
Sbjct: 15 LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDH------MLAMGSLDH 68
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
I++ G C A +V++ GSL ++ + + +N +A + YL
Sbjct: 69 AYIVRLLGICPGASLQ-LVTQLSPLGSLLDHVRQHRDS--LDPQRLLNWCVQIAKGMYYL 125
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEI 936
+ VH +++++N+LL S+ ++DFG+A L P ++ + A E
Sbjct: 126 EEHRM---VHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALES 182
Query: 937 AHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
R T + DV S+GV E++ G P Y +++ + RL P
Sbjct: 183 ILFGRYTHQSDVWSYGVTVWEMMSYGAEP--YAGMRPHEVPDLLEK-----GERLAQPQI 235
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+D M V + C + RPT K++ N
Sbjct: 236 CTIDVYM----VMVKCWMIDENVRPTFKELAN 263
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 5e-14
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMAD--QDEFLNEVLALTEIRHRNIIK 823
IG G G+VYK P+G ++A+K +++ D + + E+ L ++ H N++K
Sbjct: 82 IGSGAGGTVYKVIHRPTGRLYALK-----VIYGNHEDTVRRQICREIEILRDVNHPNVVK 136
Query: 824 FHGFCSNAQHSFIVSEYLDRGSL--TTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
H + ++ E++D GSL T I + A +V + + + ++YLH
Sbjct: 137 CHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLA---------DVARQILSGIAYLHRR 187
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
IVH DI N+L++S ++DFG+++ L + GT Y +PE +
Sbjct: 188 ---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDL 244
Query: 942 ATEKY-----DVHSFGVLALEVIKGNHP 964
Y D+ S GV LE G P
Sbjct: 245 NHGAYDGYAGDIWSLGVSILEFYLGRFP 272
|
Length = 353 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 6e-14
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKK---FNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G G G VYKA+ +FA K S+ +E+ D F+ E+ L+E +H NI+
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESE---EELED---FMVEIDILSECKHPNIVG 66
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
+ +I+ E+ D G+L +I+ + Q V + + AL++LH
Sbjct: 67 LYEAYFYENKLWILIEFCDGGALDSIM--LELERGLTEPQIRYVCRQMLEALNFLHSH-- 122
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT 943
++H D+ + N+LL + + ++DFG++ F GT + APE+ + T
Sbjct: 123 -KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEV--VACET 179
Query: 944 EK---Y----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP--- 993
K Y D+ S G+ +E+ + P ++ ++ +I ++ L P
Sbjct: 180 FKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----MRVLLKILKSEPPTLDQPSKW 234
Query: 994 SRDVMDKLMSIMEVAILCLVESPEARPT 1021
S D L S CLV+ P+ RPT
Sbjct: 235 SSSFNDFLKS-------CLVKDPDDRPT 255
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 7e-14
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 42/269 (15%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLN----EVLALTEIRHRNI 821
+G G GSVY+ L G FAVK+ + L D+ E + E+ L++++H NI
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVS---LADDGQTGQEAVKQLEQEIALLSKLQHPNI 64
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+++ G + +I E + GSL +LK + E + + L YLH
Sbjct: 65 VQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPE---PVIRLYTRQILLGLEYLHDR 121
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
VH DI N+L+D+ ++DFG+AK + S +F G+ + APE+ +
Sbjct: 122 ---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA-KSFKGSPYWMAPEV---IA 174
Query: 942 ATEKY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--ITEINQNLDHRLPTP-- 993
Y D+ S G LE+ G P +S + + +I ++ + P P
Sbjct: 175 QQGGYGLAADIWSLGCTVLEMATGKPP-------WSQLEGVAAVFKIGRSKELP-PIPDH 226
Query: 994 -SRDVMDKLMSIMEVAILCLVESPEARPT 1021
S + D ++ CL P RPT
Sbjct: 227 LSDEAKDFIL-------KCLQRDPSLRPT 248
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 8e-14
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G VYKA + +G I A+KK +L F+ L E+ L E+ H NIIK
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIKKI--KLRFESEGIPKTALREIKLLKELNHPNIIKLL 64
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH-HDCLP 884
+ ++V E++D L ++KD + + + + + L++ H H L
Sbjct: 65 DVFRHKGDLYLVFEFMDT-DLYKLIKD--RQRGLPESLIKSYLYQLLQGLAFCHSHGIL- 120
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-T 943
H D+ +N+L+++E ++DFG+A+ +T + T Y APE+ + +
Sbjct: 121 ---HRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYS 177
Query: 944 EKYDVHSFG 952
D+ S G
Sbjct: 178 TPVDIWSVG 186
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 1e-13
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 64 PCT-----WFGIFC---NLVGR-VIS-ISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVL 113
PC W G C + G+ I + L + GL G + S HL +NLS N +
Sbjct: 396 PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPN-DISKLRHLQSINLSGNSI 454
Query: 114 YGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLS 173
GNIPP + +++ L LDL N +G IP+ +G LT LR+L + N L G +P +G
Sbjct: 455 RGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL 514
Query: 174 L 174
L
Sbjct: 515 L 515
|
Length = 623 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 1e-13
Identities = 60/266 (22%), Positives = 120/266 (45%), Gaps = 25/266 (9%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ A AVK + + FL E + ++H ++K H
Sbjct: 14 LGAGQFGEVWMATYNKHTKVAVKTMKPGSM-----SVEAFLAEANVMKTLQHDKLVKLHA 68
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++E++ +GSL LK D +K+ + ++ +A ++++
Sbjct: 69 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQR---NY 123
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ + ++DFG+A+ + + +TA G + APE + T
Sbjct: 124 IHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFT 181
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
K DV SFG+L +E++ Y + SN E+ + L+ P + +
Sbjct: 182 IKSDVWSFGILLMEIVT------YGRIPYPGMSN--PEVIRALERGYRMPRPENCPE--E 231
Query: 1004 IMEVAILCLVESPEARPTMKKVCNLL 1029
+ + + C PE RPT + + ++L
Sbjct: 232 LYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 1e-13
Identities = 90/279 (32%), Positives = 129/279 (46%), Gaps = 19/279 (6%)
Query: 172 LSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQN 231
L + L L N I L L+NL L L+NN++ P + ++L LDLS N
Sbjct: 92 LLPLPSLDLNLNRLRSNISE-LLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDN 150
Query: 232 QLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSN 291
++ S+P L NL NL L L N L +P ++ NL +L LDLS N++ +P
Sbjct: 151 KIE-SLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSNLNNLDLSGNKIS-DLPPEIEL 207
Query: 292 LSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
LS+L + L NNS+ + + NL+ LS L L N+L+ +P SIGNLS+L TL L +N
Sbjct: 208 LSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNN 265
Query: 352 GFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRN 411
+ +G L +L +L+L N LS +P L L L+ L L K
Sbjct: 266 Q--ISSISSLGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLNLLLTLKALELKLNSI 323
Query: 412 LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY 450
L + L P + S NNL+
Sbjct: 324 LLNNNILSN-----------GETSSPEALSILESLNNLW 351
|
Length = 394 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 1e-13
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 47/278 (16%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVK-----KFNSQLLFDEMADQDEFLN-EVLALTEIRHR 819
IGKG G VY A + +G + AVK + D + L E+ L ++ H
Sbjct: 9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN----AL 875
NI+++ GF + ++ I EY+ GS+ + L+ +E +++ L
Sbjct: 69 NIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEE-------QLVRFFTEQVLEGL 121
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW------TAFAGTF 929
+YLH I+H D+ + N+L+D++ +SDFGI+K S + + G+
Sbjct: 122 AYLHSK---GILHRDLKADNLLVDADGICKISDFGISK----KSDDIYDNDQNMSMQGSV 174
Query: 930 GYAAPEIAHMMRA--TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987
+ APE+ H + K D+ S G + LE+ G P ++ + + M ++ N
Sbjct: 175 FWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPW----SDEEAIAAMF-KLG-NKR 228
Query: 988 HRLPTPSRDVMDKLMSIMEVAI----LCLVESPEARPT 1021
P P D M++ VA+ C +P+ RPT
Sbjct: 229 SAPPIPP----DVSMNLSPVALDFLNACFTINPDNRPT 262
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 2e-13
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 16/126 (12%)
Query: 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLI 621
L L N IP + KL HL ++LS N ++G IPP + ++ SLE L+LS+N+ I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 622 PGCFEEMRSLSRIDIAYNELQGPIPNSTA----------FKDGLMEGNKGLCGNFKALPS 671
P ++ SL +++ N L G +P + F D N GLCG L +
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTD-----NAGLCG-IPGLRA 536
Query: 672 CDAFMS 677
C +S
Sbjct: 537 CGPHLS 542
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 2e-13
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 106 LNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSI 165
L L L G IP IS L L++++L N + G IP +G +T L +L N +GSI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 166 PLEIGKLSLINVLTLCHNNFSGRIPPSLG 194
P +G+L+ + +L L N+ SGR+P +LG
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 2e-13
Identities = 71/264 (26%), Positives = 111/264 (42%), Gaps = 16/264 (6%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG+ VYKA L G + A+KK + D A QD L E+ L ++ H N+IK+
Sbjct: 10 IGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQD-CLKEIDLLKQLDHPNVIKYL 68
Query: 826 -GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMNVIKGVANALSYLHHDCL 883
F N + + IV E D G L+ ++K K + +AL ++H
Sbjct: 69 ASFIENNELN-IVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-- 125
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT 943
I+H DI NV + + + D G+ +F + ++ + GT Y +PE H
Sbjct: 126 -RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN 184
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
K D+ S G L E+ P N S I + + P P+ ++L
Sbjct: 185 FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYP-----PLPADHYSEELRD 239
Query: 1004 IMEVAILCLVESPEARPTMKKVCN 1027
++ C+ PE RP + V
Sbjct: 240 LVSR---CINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 2e-13
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 32/269 (11%)
Query: 767 IGKGRQGSVYKA-ELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G G G+VYK +P G I A+K N EF++E L + + H ++
Sbjct: 15 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET---TGPKANVEFMDEALIMASMDHPHL 71
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
++ G C + +V++ + G L + + G +N +A + YL
Sbjct: 72 VRLLGVCLSPTIQ-LVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER 128
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAHM 939
L VH D++++NVL+ S + ++DFG+A+ L + A G + A E H
Sbjct: 129 RL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 185
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRD 996
+ T + DV S+GV E++ G P D + T EI L+ RLP P
Sbjct: 186 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---------EIPDLLEKGERLPQPPIC 236
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+D M V + C + ++RP K++
Sbjct: 237 TIDVYM----VMVKCWMIDADSRPKFKEL 261
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 2e-13
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 31/268 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG+G G+V + E +G AVK + FL E +T++ H+N+++ G
Sbjct: 14 IGEGEFGAVLQGEY-TGQKVAVKNIKCDV------TAQAFLEETAVMTKLHHKNLVRLLG 66
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ +IV E + +G+L L+ A Q + VA + YL L
Sbjct: 67 VILH-NGLYIVMELMSKGNLVNFLRTRGRAL-VSVIQLLQFSLDVAEGMEYLESKKL--- 121
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKY 946
VH D++++N+L+ + A VSDFG+A+ + + + + APE + + K
Sbjct: 122 VHRDLAARNILVSEDGVAKVSDFGLAR-VGSMGVDNSKLP--VKWTAPEALKHKKFSSKS 178
Query: 947 DVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKLMS 1003
DV S+GVL EV G P +S E+ + ++ +R+ P D +
Sbjct: 179 DVWSYGVLLWEVFSYGRAPYPKMSLK---------EVKECVEKGYRMEPPEGCPAD-VYV 228
Query: 1004 IMEVAILCLVESPEARPTMKKVCNLLCK 1031
+M C P+ RP+ K+ L K
Sbjct: 229 LMTS---CWETEPKKRPSFHKLREKLEK 253
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 3e-13
Identities = 38/91 (41%), Positives = 46/91 (50%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
L L L G I + L + N S N+I G+IPP +G + L+VLDLS N G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 502 PVQFEKLFSLNKLILNLNQLSGGVPLEFGSL 532
P +L SL L LN N LSG VP G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGR 513
|
Length = 623 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 3e-13
Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 29/261 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG G G+VY A ++ + + A+KK + QD + EV L ++RH N I++
Sbjct: 23 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQQLRHPNTIEYK 81
Query: 826 GFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G C +H+ ++V EY GS + IL + K + + G L+YLH
Sbjct: 82 G-CYLREHTAWLVMEYC-LGSASDIL--EVHKKPLQEVEIAAICHGALQGLAYLHSHER- 136
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM---R 941
+H DI + N+LL ++DFG A ++P +S F GT + APE+ M +
Sbjct: 137 --IHRDIKAGNILLTEPGTVKLADFGSASLVSPANS----FVGTPYWMAPEVILAMDEGQ 190
Query: 942 ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT-PSRDVMDK 1000
K DV S G+ +E+ + P + N S + I QN PT S D D
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP--LFNMNAMS---ALYHIAQN---DSPTLSSNDWSDY 242
Query: 1001 LMSIMEVAILCLVESPEARPT 1021
+ ++ CL + P+ RP+
Sbjct: 243 FRNFVD---SCLQKIPQDRPS 260
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 4e-13
Identities = 39/93 (41%), Positives = 56/93 (60%)
Query: 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQL 233
I+ L L + G IP + L +L + L+ NS+ G+IP +G++ SL +LDLS N
Sbjct: 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSF 478
Query: 234 RGSIPFSLANLSNLGILYLYKNSLFGFIPSVIG 266
GSIP SL L++L IL L NSL G +P+ +G
Sbjct: 479 NGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 4e-13
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNL 316
L GFIP+ I L+ L ++LS N + G+IP S +++SL ++ L NS +GSIP + G L
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 317 EALSELGLYINQLDGVIPPSIG 338
+L L L N L G +P ++G
Sbjct: 490 TSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 4e-13
Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 49/289 (16%)
Query: 767 IGKGRQGSVYKAELPSGI------IFAVKKFNSQLLFDEMADQD---EFLNEVLALTEIR 817
+G+G G V+ E + AVK E A D +F E LT +
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVK------TLKETASNDARKDFEREAELLTNFQ 66
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTIL-----------KDDAAAKEFGWNQRMN 866
H NI+KF+G C+ +V EY++ G L L D+ E +Q +
Sbjct: 67 HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQ 126
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
+ +A+ + YL VH D++++N L+ + + DFG+++ + +++++
Sbjct: 127 IAVQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR--DVYTTDYYRVG 181
Query: 927 GT----FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITE 981
G + PE + T + DV SFGV+ E+ G P + SN E
Sbjct: 182 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQP-------WYGLSN--EE 232
Query: 982 INQNLDH-RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ + + RL R ++ IM + C P+ R +K + L
Sbjct: 233 VIECITQGRLLQRPRTCPSEVYDIM---LGCWKRDPQQRINIKDIHERL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 4e-13
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 42/283 (14%)
Query: 767 IGKGRQGSVYKAELPSG------IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V+ A+ + VK + Q EF E+ ++ H+N
Sbjct: 13 LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT---KDENLQSEFRRELDMFRKLSHKN 69
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGW------NQRMNVIKGVANA 874
+++ G C A+ +++ EY D G L L+ + E Q++ + +A
Sbjct: 70 VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALG 129
Query: 875 LSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
+ +L VH D++++N L+ S+ E VS ++K + ++S +
Sbjct: 130 MDHLSNAR-----FVHRDLAARNCLVSSQREVKVSLLSLSK--DVYNSEYYKLRNALIPL 182
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSN--MITEINQNL 986
+ APE + K DV SFGVL EV +G P F S+ ++ + Q
Sbjct: 183 RWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELP-------FYGLSDEEVLNRL-QAG 234
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
LP P +L +M C +P+ RP+ ++ + L
Sbjct: 235 KLELPVPE-GCPSRLYKLMTR---CWAVNPKDRPSFSELVSAL 273
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 5e-13
Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 55/292 (18%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-R 817
FG+ IG+G +V A E + +A+K + + L E E LT +
Sbjct: 4 KFGKI--IGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKK-VKYVKIEKEVLTRLNG 60
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKGVA 872
H IIK + + ++ + V EY G L ++ D+ + +
Sbjct: 61 HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTR--------FYAAEIL 112
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA-------- 924
AL YLH I+H D+ +N+LLD + ++DFG AK L+P+SS +
Sbjct: 113 LALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNID 169
Query: 925 ------------FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP-RDYVSTN 971
F GT Y +PE+ + A + D+ + G + +++ G P R S
Sbjct: 170 SQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRG--SNE 227
Query: 972 FSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
+ +F I ++ + P ++D+++KL LV P+ R +
Sbjct: 228 YLTFQK-ILKLEYSFPPNFPPDAKDLIEKL----------LVLDPQDRLGVN 268
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 70.5 bits (172), Expect = 7e-13
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 759 DDFGEKYC-IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
DDF E+ +G G G V K + PSG+I A K + ++ + A +++ + E+ L E
Sbjct: 5 DDF-ERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHEC 60
Query: 817 RHRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK+ AK V V L
Sbjct: 61 NSPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGL 116
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 117 AYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 172
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D+ S G+ +E+ G +P
Sbjct: 173 RLQGTHYSVQSDIWSMGLSLVELAIGRYP 201
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 8e-13
Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 69/290 (23%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-------H 818
IG+G G VYKA +G + A+K + D + D++E + E E H
Sbjct: 14 IGEGTYGKVYKARHKKTGQLVAIK------IMDIIEDEEEEIKE-----EYNILRKYSNH 62
Query: 819 RNIIKFHGFCSNAQHS------FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN------ 866
NI F+G ++V E GS+T D +R+
Sbjct: 63 PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVT-----DLVKGLRKKGKRLKEEWIAY 117
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
+++ L+YLH + ++H DI +N+LL E + DFG++ L+ F
Sbjct: 118 ILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFI 174
Query: 927 GTFGYAAPE-IAHMMRATEKY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--- 978
GT + APE IA + Y DV S G+ A+E+ G P +M
Sbjct: 175 GTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPP----------LCDMHPM 224
Query: 979 --ITEINQNLDHRLPTP---SRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
+ +I +N L +P S+ D + CL+++ E RP M+
Sbjct: 225 RALFKIPRNPPPTLKSPENWSKKFNDFISE-------CLIKNYEQRPFME 267
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 1e-12
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 346 LYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI 405
L L + G G +PN+I L+ L + L N + G IP S+G++T L ++++ N G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 406 PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHP 437
P+S LTSL L N N+L G+V A G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRL 514
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 1e-12
Identities = 39/89 (43%), Positives = 52/89 (58%)
Query: 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285
L L LRG IP ++ L +L + L NS+ G IP +G++ SL LDLS N GSI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 286 PLSFSNLSSLTLMSLFNNSLSGSIPPTQG 314
P S L+SL +++L NSLSG +P G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 1e-12
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 38/227 (16%)
Query: 764 KYCIGKGRQGSVYKAE----LPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
K+ +G+G G V+ AE LP ++ AVK E A QD F E LT ++
Sbjct: 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQD-FQREAELLTVLQ 65
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------------DDAAAKEFGWNQRM 865
H++I++F+G C+ + +V EY+ G L L+ +D A + Q +
Sbjct: 66 HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQML 125
Query: 866 NVIKGVANALSY---LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
+ +A+ + Y LH VH D++++N L+ + DFG+++ + +S+++
Sbjct: 126 AIASQIASGMVYLASLH------FVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDY 177
Query: 923 TAFAG----TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHP 964
G + PE + T + D+ SFGV+ E+ G P
Sbjct: 178 YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 1e-12
Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 23/263 (8%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFL--NEVLALTEIRHRNIIKF 824
IG+G G +Y A+ S V K ++ +M +++ EV+ L +++H NI+ F
Sbjct: 8 IGEGSFGKIYLAKAKSDSEHCVIK---EIDLTKMPVKEKEASKKEVILLAKMKHPNIVTF 64
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
FIV EY D G L + F +Q ++ ++ L ++H
Sbjct: 65 FASFQENGRLFIVMEYCDGGDLMKRINRQRGVL-FSEDQILSWFVQISLGLKHIHDR--- 120
Query: 885 PIVHGDISSKNVLLDSEHE-AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT 943
I+H DI S+N+ L A + DFGIA+ LN GT Y +PEI
Sbjct: 121 KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYN 180
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL-PTPSRDVMDKLM 1002
K D+ S G + E+ HP + ++ ++ +I Q + P SRD+ +
Sbjct: 181 NKTDIWSLGCVLYELCTLKHPFEG-----NNLHQLVLKICQGYFAPISPNFSRDLRSLIS 235
Query: 1003 SIMEVAILCLVESPEARPTMKKV 1025
+ +V SP RP++ +
Sbjct: 236 QLFKV-------SPRDRPSITSI 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 1e-12
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 35/281 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKA--ELPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+D CIG+G+ G VY+ P I AVK + + +++FL E +
Sbjct: 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC---TSPSVREKFLQEAYIMR 62
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK---GV 871
+ H +I+K G + +IV E G L + L+ ++I +
Sbjct: 63 QFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQ-----VNKYSLDLASLILYSYQL 116
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF-- 929
+ AL+YL VH DI+++NVL+ S + DFG++++L S + A G
Sbjct: 117 STALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY-YKASKGKLPI 172
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ APE + R T DV FGV E++ G P V N ++I I
Sbjct: 173 KWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-----DVIGRIENG--E 225
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKK-VCNL 1028
RLP P L S+M C P RP + L
Sbjct: 226 RLPMPPN-CPPTLYSLMT---KCWAYDPSKRPRFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 1e-12
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 22/241 (9%)
Query: 792 NSQLLFDE--MADQDE-----FLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRG 844
+S +++ E + E LNE++ L+ ++H NII ++ + I EY + G
Sbjct: 25 DSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGG 84
Query: 845 SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904
+L + + F + + + +A+SY+H I+H DI + N+ L
Sbjct: 85 TLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLI 140
Query: 905 HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ DFGI+K L S GT Y +PE+ ++ K D+ + G + E++
Sbjct: 141 KLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL--TLK 198
Query: 965 RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
R + +TN N++ +I Q + + + L+ L + PE RPT +
Sbjct: 199 RTFDATN---PLNLVVKIVQGNYTPVVSVYSSELISLVH------SLLQQDPEKRPTADE 249
Query: 1025 V 1025
V
Sbjct: 250 V 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 1e-12
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG+I A K + ++ + A +++ + E+ L E
Sbjct: 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECN 61
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 62 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 116
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 117 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 172
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D+ S G+ +E+ G +P
Sbjct: 173 RLQGTHYSVQSDIWSMGLSLVEMAIGRYP 201
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 1e-12
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 34/184 (18%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEVLALTEIRHRN 820
+G+G G V K +G I A+KKF ++ DE L EV L ++RH N
Sbjct: 9 VGEGAYGVVLKCRNKATGEIVAIKKFKE-------SEDDEDVKKTALREVKVLRQLRHEN 61
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------DDAAAKEFGWNQRMNVIKGVANA 874
I+ ++V EY++R +L +L+ A + + W + A
Sbjct: 62 IVNLKEAFRRKGRLYLVFEYVER-TLLELLEASPGGLPPDAVRSYIWQ--------LLQA 112
Query: 875 LSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-PHSSNWTAFAGTFGYA 932
++Y H H+ I+H DI +N+L+ + DFG A+ L +S T + T Y
Sbjct: 113 IAYCHSHN----IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYR 168
Query: 933 APEI 936
APE+
Sbjct: 169 APEL 172
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 2e-12
Identities = 36/89 (40%), Positives = 48/89 (53%)
Query: 298 MSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV 357
+ L N L G IP L L + L N + G IPPS+G+++SL L L N F G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 358 PNEIGYLKSLSKLELCRNHLSGVIPHSIG 386
P +G L SL L L N LSG +P ++G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 2e-12
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V K PSG+I A K + ++ + A +++ + E+ L E
Sbjct: 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KPAIRNQIIRELKVLHECN 57
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
I+ F+G F S+ + S I E++D GSL +LK A N + V L+
Sbjct: 58 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKK---AGRIPENILGKISIAVLRGLT 113
Query: 877 YLH--HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
YL H I+H D+ N+L++S E + DFG++ L S +F GT Y +P
Sbjct: 114 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSP 167
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E T + D+ S G+ +E+ G +P
Sbjct: 168 ERLQGTHYTVQSDIWSLGLSLVEMAIGRYP 197
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 3e-12
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 161 LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220
L G IP +I KL + + L N+ G IPPSLG++++L L L+ NS GSIP +G L
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 221 NSLSILDLSQNQLRGSIPFSL 241
SL IL+L+ N L G +P +L
Sbjct: 490 TSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.3 bits (168), Expect = 3e-12
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEF----LNEVLALTEIRHRNI 821
IG+G G VYKA +G + A+KK + +E ++ F + E+ L ++RH NI
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKIR---MENE---KEGFPITAIREIKLLQKLRHPNI 60
Query: 822 IKFHGFC-SNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
++ S + S ++V EY+D LT +L D+ +F +Q +K + L YLH
Sbjct: 61 VRLKEIVTSKGKGSIYMVFEYMDH-DLTGLL--DSPEVKFTESQIKCYMKQLLEGLQYLH 117
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS-NWTAFAGTFGYAAPEIAH 938
+ I+H DI N+L++++ ++DFG+A+ +S ++T T Y PE+
Sbjct: 118 SN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPEL-- 172
Query: 939 MMRAT---EKYDVHSFGVLALEVIKG 961
++ AT + D+ S G + E+ G
Sbjct: 173 LLGATRYGPEVDMWSVGCILAELFLG 198
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 3e-12
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 767 IGKGRQGSVYKAEL----PSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V+ AE P+ ++ AVK L A + +F E LT ++H +
Sbjct: 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL----AARKDFQREAELLTNLQHEH 68
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK---DDA----------AAKEFGWNQRMNV 867
I+KF+G C + +V EY+ G L L+ DA A E G +Q +++
Sbjct: 69 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 128
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
+A+ + YL VH D++++N L+ + + DFG+++ + +S+++ G
Sbjct: 129 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVGG 183
Query: 928 ----TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHP 964
+ PE + T + DV SFGV+ E+ G P
Sbjct: 184 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 225
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 4e-12
Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 21/261 (8%)
Query: 766 CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFL-NEVLALTEIRHRNIIK 823
+G+G G VY ++ +G AVK+ E + L E+ L ++H I++
Sbjct: 9 LLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQ 68
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
++G + + I EY+ GS+ LK A E + + + YLH +
Sbjct: 69 YYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTE---TVTRKYTRQILEGVEYLHSN-- 123
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGYAAPEIAHMM 940
IVH DI N+L DS + DFG +K L + + GT + +PE+
Sbjct: 124 -MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGE 182
Query: 941 RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000
K DV S G +E++ P F + + + Q + +LP+
Sbjct: 183 GYGRKADVWSVGCTVVEMLTEKPPW----AEFEAMAAIFKIATQPTNPQLPSHVSPDARN 238
Query: 1001 LMSIMEVAILCLVESPEARPT 1021
+ VE+ + RP+
Sbjct: 239 FLRR------TFVENAKKRPS 253
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 5e-12
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 490 LDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSI 549
L L + + G IP KL L + L+ N + G +P GS+T L+ LDLS N + SI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 550 PKSMGNLSKLHYLNLSNNQFNHKIPTEF-EKLIHLSELDLSHN 591
P+S+G L+ L LNL+ N + ++P +L+H + + + N
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525
|
Length = 623 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 5e-12
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 32/270 (11%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+FG C+ KG VYK I A+K ++ +E + +DE + E + ++ +
Sbjct: 7 NFG---CVKKG----VYKMR-KKQIDVAIKVLKNE---NEKSVRDEMMREAEIMHQLDNP 55
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
I++ G C A+ +V E G L L E + + ++ V+ + YL
Sbjct: 56 YIVRMIGVCE-AEALMLVMEMASGGPLNKFLS--GKKDEITVSNVVELMHQVSMGMKYLE 112
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG---TFGYAAPEI 936
VH D++++NVLL ++H A +SDFG++K L S + A + + APE
Sbjct: 113 GK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPEC 169
Query: 937 AHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ + + + DV S+G+ E G P + +++ I Q P
Sbjct: 170 INFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG-----PEVMSFIEQGKRLDCPAECP 224
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
M LM C + E RP KV
Sbjct: 225 PEMYALMK------DCWIYKWEDRPNFAKV 248
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 6e-12
Identities = 37/89 (41%), Positives = 49/89 (55%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L L L G IP S L L ++L NS+ G+IPP+ G++ +L L L N +G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 334 PPSIGNLSSLRTLYLYDNGFYGLVPNEIG 362
P S+G L+SLR L L N G VP +G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 6e-12
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 15/213 (7%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
E + L +++H NI+ F H +IV EY D G L +K K F + +
Sbjct: 48 EAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRG-KLFPEDTILQWF 106
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+ + ++H ++H DI SKN+ L + + DFG A+ L + + GT
Sbjct: 107 VQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGT 163
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y PEI M K D+ S G + E+ HP +S+ N+I ++ Q
Sbjct: 164 PYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHP-----FQANSWKNLILKVCQGSYK 218
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
LP+ + L+ M +P +RP+
Sbjct: 219 PLPSHYSYELRSLIKQM------FKRNPRSRPS 245
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 6e-12
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 44/286 (15%)
Query: 767 IGKGRQGSVYKAELPSGIIFA---VKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G G V E G+ A VK+ + DE Q FL EV E+ H N+++
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDE---QLLFLQEVQPYRELNHPNVLQ 59
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRM--NVIKGVANALSY 877
G C + +V E+ G L L+ + A + QRM V G+ L
Sbjct: 60 CLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLL-WLHQ 118
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGTFGYAAPE 935
+H D++ +N L ++ + D+G+A P T A + APE
Sbjct: 119 AD------FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPE 172
Query: 936 IAHMMRA-------TEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN--MITEINQN 985
+ + T+K ++ S GV E+ + P + S+ ++ ++ +
Sbjct: 173 LVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQP-------YPDLSDEQVLKQVVRE 225
Query: 986 LDHRLPTPSRDV--MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D +LP P D+ D+ +M+ L PE RPT ++V LL
Sbjct: 226 QDIKLPKPQLDLKYSDRWYEVMQFCWL----DPETRPTAEEVHELL 267
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 6e-12
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKF----NSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+GKG G+VY G + AVK+ ++ L ++ + ++ EV L ++H NI+
Sbjct: 8 LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEK--EYEKLQEEVDLLKSLKHVNIV 65
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
++ G C + I E++ GS+++IL E + + K + + ++YLH++C
Sbjct: 66 QYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCK---YTKQILDGVAYLHNNC 122
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL------NPHSSNWTAFAGTFGYAAPEI 936
+VH DI NV+L + DFG A+ L HS+ + GT + APE+
Sbjct: 123 ---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV 179
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ K D+ S G E+ G P
Sbjct: 180 INESGYGRKSDIWSIGCTVFEMATGKPP 207
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 7e-12
Identities = 69/274 (25%), Positives = 115/274 (41%), Gaps = 47/274 (17%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+GKG G V+K L AVK L + + +FL+E L + H NI+K G
Sbjct: 3 LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQEL---KIKFLSEARILKQYDHPNIVKLIG 59
Query: 827 FCSNAQHSFIVSEYLDRGSLTTIL---KDDAAAKEFGWNQRMNVIKGVANALSYLH-HDC 882
C+ Q +IV E + G + L KD+ K Q + A ++YL +C
Sbjct: 60 VCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTK-----QLVKFALDAAAGMAYLESKNC 114
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP--HSSN--------WTAFAGTFGYA 932
+H D++++N L+ + +SDFG+++ + +SS+ WT
Sbjct: 115 ----IHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWT--------- 161
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991
APE + R + + DV S+G+L E G P + +N +R+
Sbjct: 162 APEALNYGRYSSESDVWSYGILLWETFSLGVCP-------YPGMTNQQAREQVEKGYRMS 214
Query: 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + D + +M+ C PE RP ++
Sbjct: 215 CPQK-CPDDVYKVMQ---RCWDYKPENRPKFSEL 244
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 9e-12
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 31/262 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKK--FNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G G+VY A + + AVKK ++ + ++ D + EV L +++H N I+
Sbjct: 29 IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQD---IIKEVKFLQQLKHPNTIE 85
Query: 824 FHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ G C +H+ ++V EY GS + +L + K + + G L+YLH
Sbjct: 86 YKG-CYLKEHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAITHGALQGLAYLHSHN 141
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+ +H DI + N+LL + ++DFG A +P +S F GT + APE+ M
Sbjct: 142 M---IHRDIKAGNILLTEPGQVKLADFGSASKSSPANS----FVGTPYWMAPEVILAMDE 194
Query: 943 TE---KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ K DV S G+ +E+ + P N ++ S + I QN L S + D
Sbjct: 195 GQYDGKVDVWSLGITCIELAERKPPL----FNMNAMSALY-HIAQNDSPTL--QSNEWTD 247
Query: 1000 KLMSIMEVAILCLVESPEARPT 1021
++ CL + P+ RP
Sbjct: 248 SFRGFVD---YCLQKIPQERPA 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 1e-11
Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 13/316 (4%)
Query: 327 NQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG 386
+ ++P S+ L SL L N + L L L+L N L I +
Sbjct: 56 SNTLLLLPSSLSRLLSLDLLSPSGISSLDGSENLLN-LLPLPSLDLNLNRLRSNISE-LL 113
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
LT L +++ N++ + P ++L+ L + N + + + PNL LDLS
Sbjct: 114 ELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKI-ESLPSPLRNLPNLKNLDLSF 172
Query: 447 NNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE 506
N+L ++ N L + S N I +PPEI S L+ LDLS+N I+ ++
Sbjct: 173 NDL-SDLPKLLSNLSNLNNLDLSGNKI-SDLPPEIELLSALEELDLSNNSII-ELLSSLS 229
Query: 507 KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566
L +L+ L L+ N+L +P G+L+ L+ LDLS N++SS S+G+L+ L L+LS
Sbjct: 230 NLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISS--ISSLGSLTNLRELDLSG 286
Query: 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFE 626
N ++ L+ L EL L+ + ++ ++ N +N P
Sbjct: 287 NSLSN-ALPLIALLLLLLELLLNLLLTLKALELKLNSILL---NNNILSNGETSSPEALS 342
Query: 627 EMRSLSRIDIAYNELQ 642
+ SL+ + N L
Sbjct: 343 ILESLNNLWTLDNALD 358
|
Length = 394 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 1e-11
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 30/266 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR----NI 821
+GKG GSVYK P+G+ A+K+ +L D+ +F N+++ +I H+ I
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIRLEL------DESKF-NQIIMELDILHKAVSPYI 61
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+ F+G ++ EY+D GSL + A + + + V L +L +
Sbjct: 62 VDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE 121
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
I+H D+ NVL++ + + DFG++ N +S G Y APE
Sbjct: 122 --HNIIHRDVKPTNVLVNGNGQVKLCDFGVSG--NLVASLAKTNIGCQSYMAPERIKSGG 177
Query: 942 ATE------KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ + DV S G+ LE+ G +P Y +++ ++ I LP+
Sbjct: 178 PNQNPTYTVQSDVWSLGLSILEMALGRYP--YPPETYANIFAQLSAIVDGDPPTLPSGYS 235
Query: 996 DVMDKLMSIMEVAILCLVESPEARPT 1021
D ++ CL + P RPT
Sbjct: 236 DDAQDFVA------KCLNKIPNRRPT 255
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 1e-11
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 767 IGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
I KG G V+ A+ S G I+A+K + + D+ L E L++ + ++K
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQ-VDQVLTERDILSQAQSPYVVKL- 58
Query: 826 GFCS--NAQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKGVANALSYL 878
+ S ++ ++V EYL G L ++L+ D+ A+ I + AL YL
Sbjct: 59 -YYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVAR--------IYIAEIVLALEYL 109
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF--------LNPHSSNWTAFAGTFG 930
H + I+H D+ N+L+DS ++DFG++K LN GT
Sbjct: 110 HSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPD 166
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
Y APE+ ++ D S G + E + G P
Sbjct: 167 YIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPP 200
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 1e-11
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 11/207 (5%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DD +G G G V+ + S +A+K + + + NE L E+
Sbjct: 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR-LKQEQHVHNEKRVLKEVS 59
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H II+ + + +++ EY+ G L + L+ + F + + + AL Y
Sbjct: 60 HPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLR---NSGRFSNSTGLFYASEIVCALEY 116
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH IV+ D+ +N+LLD E ++DFG AK L WT GT Y APE+
Sbjct: 117 LHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKL--RDRTWT-LCGTPEYLAPEVI 170
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + G+L E++ G P
Sbjct: 171 QSKGHNKAVDWWALGILIYEMLVGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 1e-11
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 763 EKYC-IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR--- 817
EK IG+G G V+K +G I A+KKF + +D+ + + +AL EIR
Sbjct: 4 EKLSKIGEGSYGVVFKCRNRETGQIVAIKKF--------VESEDDPVIKKIALREIRMLK 55
Query: 818 ---HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
H N++ + +V EY D L + + + + +I A
Sbjct: 56 QLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNEL---EKNPRGVPEHLIKKIIWQTLQA 112
Query: 875 LSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
+++ H H+C +H D+ +N+L+ + + + DFG A+ L ++T + T Y A
Sbjct: 113 VNFCHKHNC----IHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRA 168
Query: 934 PEI 936
PE+
Sbjct: 169 PEL 171
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 2e-11
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQL-LFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+GKG G V AEL G FAVK + L D+ + VLAL N
Sbjct: 3 LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA---WENPFLT 59
Query: 825 HGFCS--NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
H +C+ +H F V E+L+ G L ++D F + + L +LH
Sbjct: 60 HLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK- 115
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I++ D+ NV+LD + ++DFG+ K + + F GT Y APEI ++
Sbjct: 116 --GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKY 173
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
T D SFGVL E++ G P
Sbjct: 174 TFSVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 65.5 bits (159), Expect = 3e-11
Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 30/282 (10%)
Query: 749 FLYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFL 807
F E+ K D E IG G G+VY A ++ + + A+KK + QD +
Sbjct: 18 FFKEDPEKLFTDLRE---IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQD-II 73
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
EV L I+H N I++ G +++V EY GS + +L + K + +
Sbjct: 74 KEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAI 130
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
G L+YLH + +H DI + N+LL + ++DFG A +P +S F G
Sbjct: 131 THGALQGLAYLHSHNM---IHRDIKAGNILLTEPGQVKLADFGSASIASPANS----FVG 183
Query: 928 TFGYAAPEIAHMMRATE---KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ 984
T + APE+ M + K DV S G+ +E+ + P N ++ S + I Q
Sbjct: 184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL----FNMNAMSALY-HIAQ 238
Query: 985 NLDHRLPT-PSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
N PT S + D + ++ CL + P+ RPT +++
Sbjct: 239 N---ESPTLQSNEWSDYFRNFVDS---CLQKIPQDRPTSEEL 274
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 3e-11
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALTEIRHRNIIK 823
+GKG G V AEL + ++AVK ++ + D + + E VLAL +H + +
Sbjct: 3 LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQD-DDVECTMTEKRVLALAG-KHPFLTQ 60
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH-HDC 882
H F V EY++ G L ++ E + + L +LH
Sbjct: 61 LHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDE---PRARFYAAEIVLGLQFLHERG- 116
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAFAGTFGYAAPEIAHMM 940
I++ D+ NVLLDSE ++DFG+ K L +++ F GT Y APEI
Sbjct: 117 ---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS--TFCGTPDYIAPEILSYQ 171
Query: 941 RATEKYDVHSFGVLALEVIKGNHP 964
D + GVL E++ G P
Sbjct: 172 PYGPAVDWWALGVLLYEMLAGQSP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 3e-11
Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 37/281 (13%)
Query: 767 IGKGRQGSVYK---AELPSGIIF---AVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G VY+ + G A+K N M ++ EFLNE + E +
Sbjct: 14 LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNEN---ASMRERIEFLNEASVMKEFNCHH 70
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK----DDAAAKEFG---WNQRMNVIKGVAN 873
+++ G S Q + +V E + +G L + L+ + G + + + +A+
Sbjct: 71 VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIAD 130
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG--Y 931
++YL VH D++++N ++ + + DFG+ + + G +
Sbjct: 131 GMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN--MITEINQNLDH 988
APE T K DV SFGV+ E+ P + SN ++ +
Sbjct: 188 MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQP-------YQGLSNEEVLKFVIDGGHL 240
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
LP D + +LM +C +P+ RPT ++ + L
Sbjct: 241 DLPENCPDKLLELMR------MCWQYNPKMRPTFLEIVSSL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 5e-11
Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 22/265 (8%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF- 824
IG+G+ VY+A L A+KK + D A QD + E+ L ++ H N+IK+
Sbjct: 10 IGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQD-CVKEIDLLKQLNHPNVIKYL 68
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM----NVIKGVANALSYLHH 880
F + + + IV E D G L+ ++K F +R+ V K S + H
Sbjct: 69 DSFIEDNELN-IVLELADAGDLSQMIK------YFKKQKRLIPERTVWKYFVQLCSAVEH 121
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
++H DI NV + + + D G+ +F + ++ + GT Y +PE H
Sbjct: 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 181
Query: 941 RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000
K D+ S G L E+ P N S I + + P P+ +K
Sbjct: 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP-----PLPTEHYSEK 236
Query: 1001 LMSIMEVAILCLVESPEARPTMKKV 1025
L E+ +C+ P+ RP + V
Sbjct: 237 L---RELVSMCIYPDPDQRPDIGYV 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 5e-11
Identities = 73/273 (26%), Positives = 113/273 (41%), Gaps = 45/273 (16%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IGKG G VY L I AVK N ++ + ++FL E + + + H N++
Sbjct: 3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNR---ITDLEEVEQFLKEGIIMKDFSHPNVL 59
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDA---AAKE---FGWNQRMNVIKGVANAL 875
G C ++ S +V Y+ G L ++ + K+ FG VA +
Sbjct: 60 SLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQ--------VAKGM 111
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK------FLNPHSSNWTAFAGTF 929
YL VH D++++N +LD V+DFG+A+ + + H N T
Sbjct: 112 EYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH--NHTGAKLPV 166
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ A E + T K DV SFGVL E++ +G P Y + + + +
Sbjct: 167 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP--YPDVDSFDITVYLLQ-----GR 219
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
RL P D L +M + C PE RPT
Sbjct: 220 RLLQPEY-CPDPLYEVM---LSCWHPKPEMRPT 248
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 5e-11
Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 21/271 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+DF IG G G VYKA + +G + A+K + D E++ + + +
Sbjct: 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIK----LEPGEDFAVVQQEIIMMKDCK 64
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H NI+ + G +I E+ GSL I E Q V + L Y
Sbjct: 65 HSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSES---QIAYVSRETLQGLYY 121
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH +H DI N+LL ++DFG++ + + +F GT + APE+A
Sbjct: 122 LHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVA 178
Query: 938 HMMRA---TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ R + D+ + G+ A+E+ + P + + F ++T+ N P
Sbjct: 179 AVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--LMTKSNFQ-----PPKL 231
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+D M S + L ++P+ RPT +K+
Sbjct: 232 KDKMKWSNSFHHFVKMALTKNPKKRPTAEKL 262
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 7e-11
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V+KA + +G A+KK + L + +Q L E+ AL +H ++K
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQ--ALREIKALQACQHPYVVKLL 65
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKD------DAAAKEFGWNQRMNVIKGVANALSYLH 879
+ +V EY+ L+ +L+D +A K + RM ++KGVA Y+H
Sbjct: 66 DVFPHGSGFVLVMEYMPS-DLSEVLRDEERPLPEAQVKSY---MRM-LLKGVA----YMH 116
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYAAPEI 936
+ I+H D+ N+L+ ++ ++DFG+A+ F ++ T Y APE+
Sbjct: 117 AN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPEL 171
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 9e-11
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG G G+VY A ++ + + A+KK + QD + EV L ++RH N I++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQKLRHPNTIQYR 81
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G +++V EY GS + +L + K + V G L+YLH +
Sbjct: 82 GCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSHNM-- 136
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE- 944
+H D+ + N+LL + DFG A + P + F GT + APE+ M +
Sbjct: 137 -IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQY 191
Query: 945 --KYDVHSFGVLALEVIKGNHP 964
K DV S G+ +E+ + P
Sbjct: 192 DGKVDVWSLGITCIELAERKPP 213
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 1e-10
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTE 534
G IP +I LQ ++LS N I G IP + SL L L+ N +G +P G LT
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLH--YLNLSNN 567
L+ L+L+ N LS +P ++G LH N ++N
Sbjct: 492 LRILNLNGNSLSGRVPAALGGRL-LHRASFNFTDN 525
|
Length = 623 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 63.6 bits (154), Expect = 1e-10
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 40/276 (14%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE--IRHRNIIK 823
+G G G VYK + +G + A+K + D D++E + + + + + HRNI
Sbjct: 14 VGNGTYGQVYKGRHVKTGQLAAIK------VMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67
Query: 824 FHG-FCSNA-----QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
++G F ++V E+ GS+T ++K+ + + + LS+
Sbjct: 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLSH 126
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH ++H DI +NVLL E + DFG++ L+ F GT + APE+
Sbjct: 127 LHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 183
Query: 938 HMMRATE-----KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
+ K D+ S G+ A+E+ +G P +M L R P
Sbjct: 184 ACDENPDATYDFKSDLWSLGITAIEMAEGAPP----------LCDMHPMRALFLIPRNPA 233
Query: 993 P---SRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P S+ K S +E CLV++ RPT +++
Sbjct: 234 PRLKSKKWSKKFQSFIES---CLVKNHSQRPTTEQL 266
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 1e-10
Identities = 72/271 (26%), Positives = 114/271 (42%), Gaps = 37/271 (13%)
Query: 767 IGKGRQGSVYKA---ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G G G+V K S AVK + ++ A +DE L E + ++ + I++
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN--NDPALKDELLREANVMQQLDNPYIVR 60
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
G C A+ +V E + G L L+ + E ++ V+ + YL
Sbjct: 61 MIGICE-AESWMLVMELAELGPLNKFLQKNKHVTE---KNITELVHQVSMGMKYLEET-- 114
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-----YAAPEIAH 938
VH D++++NVLL ++H A +SDFG++K L + + A T G + APE +
Sbjct: 115 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK--AKTHGKWPVKWYAPECMN 171
Query: 939 MMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP---S 994
+ + K DV SFGVL E G P Y + + MI R+ P
Sbjct: 172 YYKFSSKSDVWSFGVLMWEAFSYGQKP--YKGMKGNEVTQMIES-----GERMECPQRCP 224
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
++ D LM LC + RP V
Sbjct: 225 PEMYD-LMK------LCWTYGVDERPGFAVV 248
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 1e-10
Identities = 71/280 (25%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIR 817
FGE C G + S K ELP I L +D+ FL E L L +
Sbjct: 17 RFGE-LCRGCLKLPS--KRELPVAI---------HTLRAGCSDKQRRGFLAEALTLGQFD 64
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H NI++ G + IV+EY+ G+L + L+ + Q M ++ G+A+ + Y
Sbjct: 65 HSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKY 122
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-----YA 932
L VH +++ VL++S+ +S F + + G +A
Sbjct: 123 LSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRL----QEDKSEAIYTTMSGKSPVLWA 175
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991
APE + DV SFG++ EV+ G P Y S ++I + RLP
Sbjct: 176 APEAIQYHHFSSASDVWSFGIVMWEVMSYGERP--YWDM---SGQDVIKAVEDGF--RLP 228
Query: 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
P R+ + L +M + C + RP ++ ++L K
Sbjct: 229 AP-RNCPNLLHQLM---LDCWQKERGERPRFSQIHSILSK 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 1e-10
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 767 IGKGRQGSVY----KAELPSG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G G G VY L G I AVK E + EFL E ++ H
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQE---KKEFLKEAHLMSNFNHP 59
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG----WNQRMNVIKGVANAL 875
NI+K G C + +I+ E ++ G L + L+D + + +++ VA
Sbjct: 60 NIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGC 119
Query: 876 SYLHHDCLPPIVHGDISSKNVLL-----DSEHEAHVSDFGIAKFLNPHSSNWTAFAG--- 927
YL +H D++++N L+ D++ + DFG+A+ + + S++ G
Sbjct: 120 VYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI--YKSDYYRKEGEGL 174
Query: 928 -TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985
+ APE + T + DV SFGVL E++ G P Y + N +T
Sbjct: 175 LPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP--YPALNNQEVLQHVTA---- 228
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RL P + DK+ +M C + P RPT ++ +L
Sbjct: 229 -GGRLQKP-ENCPDKIYQLMT---NCWAQDPSERPTFDRIQEIL 267
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 32/215 (14%)
Query: 763 EKY----CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEF----LNEVLAL 813
EKY +G+G G V K + +G I A+KKF E D + E+ L
Sbjct: 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFL------ESEDDKMVKKIAMREIRML 54
Query: 814 TEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGV 871
++RH N++ + ++V E++D T+L DD G ++ + +
Sbjct: 55 KQLRHENLVNLIEVFRRKKRLYLVFEFVDH----TVL-DDLEKYPNGLDESRVRKYLFQI 109
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
+ + H I+H DI +N+L+ + DFG A+ L +T + T Y
Sbjct: 110 LRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWY 166
Query: 932 AAPEIAHMMRATEKY----DVHSFGVLALEVIKGN 962
APE ++ KY D+ + G L E++ G
Sbjct: 167 RAPE---LLVGDTKYGRAVDIWAVGCLVTEMLTGE 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 1e-10
Identities = 65/276 (23%), Positives = 124/276 (44%), Gaps = 32/276 (11%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ A++ E L+E +
Sbjct: 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANK-EILDEAYVMA 64
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 65 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 119
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT--FG 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 120 KGMNYLEERRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIK 176
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989
+ A E T + DV S+GV E++ G+ P D + S S+++ + R
Sbjct: 177 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GER 229
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
LP P +D M +++ C + ++RP +++
Sbjct: 230 LPQPPICTIDVYMIMVK----CWMIDADSRPKFREL 261
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 2e-10
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 516 LNLNQ--LSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKI 573
L L+ L G +P + L LQ ++LS N + +IP S+G+++ L L+LS N FN I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 574 PTEFEKLIHLSELDLSHNFLQGEIP 598
P +L L L+L+ N L G +P
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 2e-10
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 28/203 (13%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF---LNEVLALTEIRHRNII 822
+G G G VYKA L +G + AVK ++ D+F E+ + E +H NI+
Sbjct: 17 VGSGTYGDVYKARNLHTGELAAVKII-------KLEPGDDFSLIQQEIFMVKECKHCNIV 69
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ G + + +I EY GSL I E Q V + L+YLH
Sbjct: 70 AYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSEL---QIAYVCRETLQGLAYLHSKG 126
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+H DI N+LL + ++DFG+A + + +F GT + APE+A A
Sbjct: 127 K---MHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVA----A 179
Query: 943 TEKY-------DVHSFGVLALEV 958
EK D+ + G+ A+E+
Sbjct: 180 VEKNGGYNQLCDIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 2e-10
Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 765 YC----IGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
YC +GKG G V + G + +KK N + E E L++++H
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAE--QEAQLLSQLKHP 59
Query: 820 NIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
NI+ + + +IV + + G L LK+ K NQ + +A AL YL
Sbjct: 60 NIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKG-KLLPENQVVEWFVQIAMALQYL 118
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH 938
H I+H D+ ++NV L + V D GIA+ L + GT Y +PE+
Sbjct: 119 HEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFS 175
Query: 939 MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
K DV + G E+ H + N ++++ I ++ +LP +D
Sbjct: 176 NKPYNYKSDVWALGCCVYEMATLKH-----AFNAKDMNSLVYRI---IEGKLPPMPKDYS 227
Query: 999 DKLMSIMEVAILCLVESPEARPTMKKV 1025
+L ++ +L + PE RP++K +
Sbjct: 228 PELGELIA-TMLS--KRPEKRPSVKSI 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 2e-10
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQ-LLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+GKG G V AEL + FA+K +L D+ + VLAL +
Sbjct: 3 LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAW---EHPFLT 59
Query: 825 HGFCS--NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
H FC+ +H F V EYL+ G L ++ + F + + L +LH
Sbjct: 60 HLFCTFQTKEHLFFVMEYLNGGDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKK- 115
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I++ D+ NVLLD + ++DFG+ K + F GT Y APEI +
Sbjct: 116 --GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKY 173
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
E D SFGVL E++ G P
Sbjct: 174 NESVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 3e-10
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 56/287 (19%)
Query: 767 IGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHR 819
IG+G G V +A + + I +K+F S+ D +F E+ L ++ H
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE------NDHRDFAGELEVLCKLGHHP 63
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGW------NQRMN 866
NII G C N + +I EY G+L L+ D A AKE G Q +
Sbjct: 64 NIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQ 123
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
VA + YL +H D++++NVL+ + ++DFG+++
Sbjct: 124 FASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKIADFGLSR------GEEVYVK 174
Query: 927 GTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI-T 980
T G + A E + T K DV SFGVL E+ VS + + M
Sbjct: 175 KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI---------VSLGGTPYCGMTCA 225
Query: 981 EINQNL--DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
E+ + L +R+ P R+ D++ +M C + P RP ++
Sbjct: 226 ELYEKLPQGYRMEKP-RNCDDEVYELMR---QCWRDRPYERPPFAQI 268
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 58/289 (20%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK L +F E+ L ++H NI
Sbjct: 12 LGKGNFGSVELCRYDPLQDNTGEVVAVKK----LQHSTAEHLRDFEREIEILKSLQHDNI 67
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM-----NVIKGVANA 874
+K+ G C +A ++ +V EYL GSL L+ + +++ + KG
Sbjct: 68 VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDH---RKLLLYASQICKG---- 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGTF 929
+ YL VH D++++N+L++SE+ + DFG+ K L P + + F
Sbjct: 121 MEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVL-PQDKEYYKVREPGESPIF 176
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS---FSNMITEINQNL 986
Y APE + + DV SFGV+ E+ Y + S F M+ Q
Sbjct: 177 WY-APESLTESKFSVASDVWSFGVVLYELFT------YSDKSCSPPAEFMRMMGNDKQGQ 229
Query: 987 ------------DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
+ RLP P ++ +IM+ C P RP+
Sbjct: 230 MIVYHLIELLKNNGRLPAPP-GCPAEIYAIMK---ECWNNDPSQRPSFS 274
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 3e-10
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQL-LFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+GKG G V+ AEL + FA+K + L D+ + VL+L H +
Sbjct: 3 LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLT-- 59
Query: 825 HGFCS--NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
H +C+ ++ F V EYL+ G L ++ + +F + + L +LH
Sbjct: 60 HLYCTFQTKENLFFVMEYLNGGDLMFHIQ---SCHKFDLPRATFYAAEIICGLQFLHSK- 115
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
IV+ D+ N+LLD++ ++DFG+ K + F GT Y APEI +
Sbjct: 116 --GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKY 173
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
D SFGVL E++ G P
Sbjct: 174 NTSVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.1 bits (152), Expect = 3e-10
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 766 CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEVLALTEIRHR 819
+G+G G VYKA + +G I A+KK + +++E L E+ L E++H
Sbjct: 6 KLGEGTYGVVYKARDKKTGEIVALKKI-------RLDNEEEGIPSTALREISLLKELKHP 58
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA----NAL 875
NI+K + ++V EY D L L N+IK + L
Sbjct: 59 NIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDK--RPGPL----SPNLIKSIMYQLLRGL 111
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+Y H I+H D+ +N+L++ + ++DFG+A+ +T T Y APE
Sbjct: 112 AYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPE 168
Query: 936 I 936
I
Sbjct: 169 I 169
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 3e-10
Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V+ AE I+ AVK + A +D F E LT ++H +
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKD-FHREAELLTNLQHEH 68
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK---DDAA-------AKEFGWNQRMNVIKG 870
I+KF+G C +V EY+ G L L+ DA E +Q +++ +
Sbjct: 69 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQ 128
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG--- 927
+A + YL VH D++++N L+ + DFG+++ + +S+++ G
Sbjct: 129 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGGHTM 183
Query: 928 -TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985
+ PE + T + DV S GV+ E+ G P +S N +I I Q
Sbjct: 184 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVIECITQG 238
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ P + ++ + C P R +K++ +LL
Sbjct: 239 RVLQRPRTCPK------EVYDLMLGCWQREPHMRLNIKEIHSLL 276
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 6e-10
Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 55/304 (18%)
Query: 745 FNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLL 796
F +FL K I D GE G K EL +G AVK +
Sbjct: 1 FEKRFL-----KRIRDLGE---------GHFGKVELCRYDPEGDNTGEQVAVKSLKPESG 46
Query: 797 FDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI--VSEYLDRGSLTTILKDDA 854
+ +AD E+ L + H NI+K+ G C+ + I + E+L GSL L +
Sbjct: 47 GNHIAD---LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNK 103
Query: 855 AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914
+ Q++ + + YL VH D++++NVL++SEH+ + DFG+ K
Sbjct: 104 N--KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 158
Query: 915 LNPHSSNWTAF----AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVST 970
+ +T + F Y APE + DV SFGV E++ D S+
Sbjct: 159 IETDKEYYTVKDDLDSPVFWY-APECLIQSKFYIASDVWSFGVTLYELLTYC---DSESS 214
Query: 971 NFSSFSNMI---------TEINQNLDH--RLPTPSRDVMDKLMSIMEVAILCLVESPEAR 1019
+ F MI T + + L+ RLP P + +++ +M C P R
Sbjct: 215 PMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPP-NCPEEVYQLMRK---CWEFQPSKR 270
Query: 1020 PTMK 1023
T +
Sbjct: 271 TTFQ 274
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 7e-10
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
+ LGL L G IP I L L+++ L N G +P +G + SL L+L N +
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN 479
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
G IP S+G LT L ++N+ N L G +P + L R FN
Sbjct: 480 GSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL-LHRASFN 521
|
Length = 623 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 9e-10
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 767 IGKGRQGSVY---KAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G G V+ K P +G ++A+K L ++ D+ E L E+ H I+
Sbjct: 4 LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIV 61
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE--FGWNQRMNVIKGVANALSYLHH 880
K H +++ ++L G L T L +KE F + +A AL +LH
Sbjct: 62 KLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALALDHLHS 116
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
I++ D+ +N+LLD E ++DFG++K H +F GT Y APE+ +
Sbjct: 117 ---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 173
Query: 941 RATEKYDVHSFGVLALEVIKGNHP 964
T+ D SFGVL E++ G+ P
Sbjct: 174 GHTQSADWWSFGVLMFEMLTGSLP 197
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 1e-09
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 40/276 (14%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLN-EVLALTEI-RHRNIIK 823
+G G G VYK + +G + A+K + D D++E + E+ L + HRNI
Sbjct: 24 VGNGTYGQVYKGRHVKTGQLAAIK------VMDVTEDEEEEIKLEINMLKKYSHHRNIAT 77
Query: 824 FHGF------CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
++G + ++V E+ GS+T ++K+ + + + + L++
Sbjct: 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKN-TKGNALKEDWIAYICREILRGLAH 136
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH ++H DI +NVLL E + DFG++ L+ F GT + APE+
Sbjct: 137 LH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 193
Query: 938 HMMR---ATEKY--DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
AT Y D+ S G+ A+E+ +G P +M L R P
Sbjct: 194 ACDENPDATYDYRSDIWSLGITAIEMAEGAPP----------LCDMHPMRALFLIPRNPP 243
Query: 993 P---SRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P S+ K + +E CLV++ +RP+ +++
Sbjct: 244 PKLKSKKWSKKFIDFIEG---CLVKNYLSRPSTEQL 276
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 1e-09
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALTEIRHRNIIK 823
+GKG G V AEL + ++A+K ++ + D D + E +LAL +H +
Sbjct: 3 LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQD-DDVDCTMTEKRILALAA-KHPFLTA 60
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH-HDC 882
H F V EY++ G L ++ +++F + V AL +LH H
Sbjct: 61 LHCCFQTKDRLFFVMEYVNGGDLMFQIQ---RSRKFDEPRSRFYAAEVTLALMFLHRHG- 116
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+++ D+ N+LLD+E ++DFG+ K + T F GT Y APEI +
Sbjct: 117 ---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEY 173
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
D + GVL E++ G P
Sbjct: 174 GPSVDWWALGVLMYEMMAGQPP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 2e-09
Identities = 67/301 (22%), Positives = 114/301 (37%), Gaps = 59/301 (19%)
Query: 767 IGKGRQGSVYKAE------LPSGIIFAVKKFNSQLLFDEMADQDEF---LNEVLALTEIR 817
+G+G G V KA AVK + E A E L+E L ++
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVK------MLKENASSSELRDLLSEFNLLKQVN 61
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H ++IK +G CS ++ EY GSL + L++ + SY
Sbjct: 62 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSY------LGSDGNRNSSY 115
Query: 878 LHHDCLPPI------------------------VHGDISSKNVLLDSEHEAHVSDFGIAK 913
L + + VH D++++NVL+ + +SDFG+++
Sbjct: 116 LDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSR 175
Query: 914 FLNPHSSNWTAFAGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVST 970
+ S G + A E T + DV SFGVL E++ G +P Y
Sbjct: 176 DVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGI 233
Query: 971 NFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030
N++ +R+ P + +++ ++M + C + P+ RPT + L
Sbjct: 234 APERLFNLL-----KTGYRMERPE-NCSEEMYNLM---LTCWKQEPDKRPTFADISKELE 284
Query: 1031 K 1031
K
Sbjct: 285 K 285
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 2e-09
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 52/285 (18%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQL-LFDEMA---DQDEFLNEVLALTEI-RHRNI 821
IG+G G V KA + + + ++ + E A D +F E+ L ++ H NI
Sbjct: 3 IGEGNFGQVLKARIKKDGL----RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 58
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGW------NQRMNVI 868
I G C + + ++ EY G+L L+ D A A Q ++
Sbjct: 59 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 118
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
VA + YL +H D++++N+L+ + A ++DFG+++ T
Sbjct: 119 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKT 169
Query: 929 FG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI-TEI 982
G + A E + T DV S+GVL E+ VS + + M E+
Sbjct: 170 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI---------VSLGGTPYCGMTCAEL 220
Query: 983 NQNL--DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ L +RL P + D++ +M C E P RP+ ++
Sbjct: 221 YEKLPQGYRLEKP-LNCDDEVYDLMR---QCWREKPYERPSFAQI 261
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-----RHRN 820
IGKG G VYK G + AVK + D ++D DE E+ A I H N
Sbjct: 30 IGKGTYGKVYKVTNKKDGSLAAVK------ILDPISDVDE---EIEAEYNILQSLPNHPN 80
Query: 821 IIKFHGFCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN------VIK 869
++KF+G A ++V E + GS+T ++K QR++ ++
Sbjct: 81 VVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLIC-----GQRLDEAMISYILY 135
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
G L +LH++ I+H D+ N+LL +E + DFG++ L GT
Sbjct: 136 GALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTP 192
Query: 930 GYAAPE-IAHMMRATEKY----DVHSFGVLALEVIKGNHP 964
+ APE IA + Y DV S G+ A+E+ G+ P
Sbjct: 193 FWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPP 232
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 2e-09
Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMAD-QDEFLNEVLALTEIRHRNIIKF 824
+G G G+VYKA L + I AVK + D + Q + ++E+ L + II F
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVK----VIPLDITVELQKQIMSELEILYKCDSPYIIGF 64
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTT-------ILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+G I +E++D GSL +L A A V+KG L+Y
Sbjct: 65 YGAFFVENRISICTEFMDGGSLDVYRKIPEHVLGRIAVA----------VVKG----LTY 110
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
L I+H D+ N+L+++ + + DFG++ L +S + GT Y APE
Sbjct: 111 LWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV--NSIAKTYVGTNAYMAPERI 165
Query: 938 HMMRATEKYDVH----SFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993
+ E+Y +H S G+ +E+ G P + N S M ++ Q + P P
Sbjct: 166 ----SGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL--MPLQLLQCIVDEDP-P 218
Query: 994 SRDVMDKLMSIMEVAILCLVESPEARPT 1021
V + C+ + P+ RP
Sbjct: 219 VLPVGQFSEKFVHFITQCMRKQPKERPA 246
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 2e-09
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 37/271 (13%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G V A + +G A+KK F E+ L +RH NII
Sbjct: 18 VGMGAFGLVCSARDQLTGQNVAIKKIMKP--FSTPVLAKRTYRELKLLKHLRHENIISLS 75
Query: 826 G-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
F S + + V+E L L +L K+F +++G L Y+H
Sbjct: 76 DIFISPLEDIYFVTELLGT-DLHRLLTSRPLEKQFIQYFLYQILRG----LKYVHS---A 127
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
+VH D+ N+L++ + + DFG+A+ +P T + T Y APEI M +
Sbjct: 128 GVVHRDLKPSNILINENCDLKICDFGLARIQDPQ---MTGYVSTRYYRAPEI---MLTWQ 181
Query: 945 KYDVH----SFGVLALEVIKGN--HP-RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
KYDV S G + E+++G P +D+V+ FS +IT++ L TP DV
Sbjct: 182 KYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN-QFS----IITDL-------LGTPPDDV 229
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028
++ + S + + + E P +K N
Sbjct: 230 INTICSENTLRFVQSLPKREPVPFSEKFKNA 260
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 2e-09
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H NI+ G C+ +++EY G L L+ ++ VA +++
Sbjct: 98 HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAF 156
Query: 878 L-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF---GYAA 933
L +C +H D++++NVLL + DFG+A+ + + SN+ + A
Sbjct: 157 LASKNC----IHRDLAARNVLLTHGKIVKICDFGLARDIM-NDSNYVVKGNARLPVKWMA 211
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
PE T + DV S+G+L E+ G++P + + S F +I E +R+
Sbjct: 212 PESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-SKFYKLIKE-----GYRMAQ 265
Query: 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P ++ IM+ C P RPT K++ L+
Sbjct: 266 PEH-APAEIYDIMKT---CWDADPLKRPTFKQIVQLI 298
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 11/238 (4%)
Query: 767 IGKGRQGSVYKAELPSGIIF-AVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V A + F AVK + + + ++ + L ++H ++ H
Sbjct: 3 IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VANALSYLHHDCLP 884
A + V +Y++ G L L+ + E R +A+AL YLH
Sbjct: 63 FSFQTADKLYFVLDYINGGELFYHLQRERCFLE----PRARFYAAEIASALGYLHS---L 115
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
IV+ D+ +N+LLDS+ ++DFG+ K H+ + F GT Y APE+ H
Sbjct: 116 NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDR 175
Query: 945 KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
D G + E++ G P + S N + + I L + +R +++ L+
Sbjct: 176 TVDWWCLGAVLYEMLYGLPP--FYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLL 231
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 52/293 (17%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNS--------QLLFDEMADQDEFLNEVLALTEI-- 816
+G+G G V +AE + + K ++L D D+D L ++++ E+
Sbjct: 20 LGEGCFGQVVRAE-----AYGIDKSRPDQTVTVAVKMLKDNATDKD--LADLISEMELMK 72
Query: 817 ---RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDA------AAKEFG 860
+H+NII G C+ +++ EY +G+L L+ D ++
Sbjct: 73 LIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLS 132
Query: 861 WNQRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ ++ VA + YL C +H D++++NVL+ ++ ++DFG+A+ ++
Sbjct: 133 FKDLVSCAYQVARGMEYLESRRC----IHRDLAARNVLVTEDNVMKIADFGLARGVHDID 188
Query: 920 SNWTAFAGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976
G + APE T + DV SFG+L E+ G P Y
Sbjct: 189 YYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP--YPGIPVEELF 246
Query: 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ E HR+ PS + M + E C P RPT K++ L
Sbjct: 247 KLLRE-----GHRMDKPSNCTHELYMLMRE----CWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 59.1 bits (144), Expect = 3e-09
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF +G G G V SG +A+K + + ++ + LNE L IR
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-KLKQVEHVLNEKRILQSIR 59
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H ++ +G + + ++V EY+ G L + L+ + F V AL Y
Sbjct: 60 HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLR---KSGRFPEPVARFYAAQVVLALEY 116
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH IV+ D+ +N+LLDS+ ++DFG AK + + +T GT Y APEI
Sbjct: 117 LHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT--YT-LCGTPEYLAPEII 170
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + G+L E++ G P
Sbjct: 171 LSKGYGKAVDWWALGILIYEMLAGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 4e-09
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR-----N 820
I KG GSVY A+ +G FA+K +M +++ N V A I
Sbjct: 4 ISKGAFGSVYLAKKRSTGDYFAIKVLKKS----DMIAKNQVTN-VKAERAIMMIQGESPY 58
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKGVANAL 875
+ K + + + ++V EYL+ G +++K + AK++ I V +
Sbjct: 59 VAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQY--------IAEVVLGV 110
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAFAGTFGYAA 933
LH I+H DI +N+L+D ++DFG+++ N F GT Y A
Sbjct: 111 EDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK------FVGTPDYLA 161
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE + + D S G + E + G P
Sbjct: 162 PETILGVGDDKMSDWWSLGCVIFEFLFGYPP 192
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 4e-09
Identities = 67/245 (27%), Positives = 89/245 (36%), Gaps = 43/245 (17%)
Query: 436 HPNLTFLDLSQNNLYGE----ISFNWRNFPKLGTFNASMNNIYGSIPPEIGD-------S 484
L L L N L E ++ R P L S+N G IP +
Sbjct: 22 LLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNET-GRIPRGLQSLLQGLTKG 80
Query: 485 SKLQVLDLSSNHIVGKIPVQFEKL---FSLNKLILNLNQLS-GGVPLEFGSLTELQY--- 537
LQ LDLS N + E L SL +L LN N L G+ L L +L
Sbjct: 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALE 140
Query: 538 -LDLSANKLSSSIPKSMGNL----SKLHYLNLSNNQFNHK-IPTEFEKLIHLSEL---DL 588
L L N+L + +++ L LNL+NN I E L L DL
Sbjct: 141 KLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDL 200
Query: 589 SHNFLQ-------GEIPPQICNMESLEELNLSHNNLFD-----LIPGCFEEMRSLSRIDI 636
++N L E + SLE LNL NNL D L SL + +
Sbjct: 201 NNNGLTDEGASALAETLASLK---SLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSL 257
Query: 637 AYNEL 641
+ N++
Sbjct: 258 SCNDI 262
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 5e-09
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 45/257 (17%)
Query: 794 QLLFDEMADQD--EFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTIL 850
++L D+ D+D + ++E+ + I +H+NII G C+ +++ EY +G+L L
Sbjct: 50 KMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYL 109
Query: 851 KDDAAAKEFGWNQRMNVIK----------------GVANALSYL-HHDCLPPIVHGDISS 893
+ A + G + + K VA + YL C +H D+++
Sbjct: 110 R---ARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC----IHRDLAA 162
Query: 894 KNVLLDSEHEAHVSDFGIAKFLNPHSSNW----TAFAGTFGYAAPEIAHMMRATEKYDVH 949
+NVL+ ++ ++DFG+A+ + H+ ++ T + APE T + DV
Sbjct: 163 RNVLVTEDNVMKIADFGLAR--DVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 220
Query: 950 SFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVA 1008
SFGVL E+ G P Y ++ E HR+ P+ + M + E
Sbjct: 221 SFGVLLWEIFTLGGSP--YPGIPVEELFKLLKE-----GHRMDKPANCTHELYMIMRE-- 271
Query: 1009 ILCLVESPEARPTMKKV 1025
C P RPT K++
Sbjct: 272 --CWHAVPSQRPTFKQL 286
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 5e-09
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLF-DEMADQDEFLNEVLALTEIR 817
DF +GKG G V AE + ++A+K ++ D+ + VLAL + +
Sbjct: 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD-K 59
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ + H + V EY++ G L ++ KE Q + ++ L +
Sbjct: 60 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISVGLFF 116
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH I++ D+ NV+LDSE ++DFG+ K F GT Y APEI
Sbjct: 117 LHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEII 173
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRD 966
+ D ++GVL E++ G P D
Sbjct: 174 AYQPYGKSVDWWAYGVLLYEMLAGQPPFD 202
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 5e-09
Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 35/288 (12%)
Query: 762 GEKYCI----GKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+KY I G G G+V A+ S G FAVK + + + + AD++ EV L
Sbjct: 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE--ADKNRAQAEVCCLLNC 88
Query: 817 RHRNIIKFH-GFC-------SNAQHSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNV 867
+I+K H F N +V +Y + G L +K A + F ++ +
Sbjct: 89 DFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLL 148
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAF 925
V A+ ++H ++H DI S N+LL S + DFG +K S+ F
Sbjct: 149 FIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTF 205
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985
GT Y APEI ++K D+ S GVL E++ P D NM +++
Sbjct: 206 CGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE--------NMEEVMHKT 257
Query: 986 LDHRL-PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL-LCK 1031
L R P P + M + A+L P+ RP+ K+ N+ +CK
Sbjct: 258 LAGRYDPLP--PSISPEMQEIVTALLS--SDPKRRPSSSKLLNMPICK 301
|
Length = 496 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 5e-09
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 21/243 (8%)
Query: 767 IGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDE------MADQDEFLNEVLALTEIRHR 819
IGKG G V A+ + G +AVK + + + MA+++ L V +H
Sbjct: 3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV------KHP 56
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
++ H A + V +Y++ G L L+ + + F + +A+AL YLH
Sbjct: 57 FLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRE---RSFPEPRARFYAAEIASALGYLH 113
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM 939
I++ D+ +N+LLDS+ ++DFG+ K HS + F GT Y APE+
Sbjct: 114 S---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRK 170
Query: 940 MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
D G + E++ G P + S + + + I L + +R +++
Sbjct: 171 QPYDRTVDWWCLGAVLYEMLYGLPP--FYSRDTAEMYDNILNKPLRLKPNISVSARHLLE 228
Query: 1000 KLM 1002
L+
Sbjct: 229 GLL 231
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 5e-09
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 36/271 (13%)
Query: 767 IGKGRQGSVYKA-ELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G G G+VYK +P G I A+K E L+E + + +
Sbjct: 15 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN---TSPKANKEILDEAYVMAGVGSPYV 71
Query: 822 IKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+ G C S Q +V++ + G L ++++ G +N +A +SYL
Sbjct: 72 CRLLGICLTSTVQ---LVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLE 126
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT--FGYAAPEIA 937
L VH D++++NVL+ S + ++DFG+A+ L+ + + A G + A E
Sbjct: 127 EVRL---VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 183
Query: 938 HMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPS 994
R T + DV S+GV E++ G P D + EI L+ RLP P
Sbjct: 184 LHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---------EIPDLLEKGERLPQPP 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+D M + + C + E RP +++
Sbjct: 235 ICTIDVYM----IMVKCWMIDSECRPRFREL 261
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 6e-09
Identities = 56/220 (25%), Positives = 87/220 (39%), Gaps = 47/220 (21%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G G G VY+ + AVK D+ +FL E L +++ H+N
Sbjct: 14 LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC---SEQDESDFLMEALIMSKFNHQN 70
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM----NVIKGVANALS 876
I++ G FI+ E + G L + L+++ E + M + VA
Sbjct: 71 IVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCK 130
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSS-----------NW 922
YL + +H DI+++N LL + A ++DFG+A+ + S W
Sbjct: 131 YLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKW 187
Query: 923 T---AF-AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
AF G F T K DV SFGVL E+
Sbjct: 188 MPPEAFLDGIF-------------TSKTDVWSFGVLLWEI 214
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 6e-09
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G VY+A + SG I A+KK D + L E+ L +RH NI++
Sbjct: 15 IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISS--LREITLLLNLRHPNIVELK 72
Query: 826 GFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
+ F+V EY ++ L ++L D F +Q ++ + L YLH +
Sbjct: 73 EVVVGKHLDSIFLVMEYCEQ-DLASLL--DNMPTPFSESQVKCLMLQLLRGLQYLHENF- 128
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA- 942
I+H D+ N+LL + ++DFG+A+ + T T Y APE+
Sbjct: 129 --IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTY 186
Query: 943 TEKYDVHSFGVLALEVIKGN 962
T D+ + G + E++
Sbjct: 187 TTAIDMWAVGCILAELLAHK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 6e-09
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 802 DQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGW 861
+++E EV L+ ++H NI+++ + +IV +Y + G L + F
Sbjct: 42 EREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVL-FPE 100
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
+Q ++ + AL ++H I+H DI S+N+ L + + DFGIA+ LN
Sbjct: 101 DQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL 157
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNH 963
GT Y +PEI K D+ + G + E+ H
Sbjct: 158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKH 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 8e-09
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 31/183 (16%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEVLALTEIRHRN 820
IG+G G VYKA + + A+KK + +DE + E+ L E++H N
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKI-------RLEQEDEGVPSTAIREISLLKEMQHGN 62
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM------NVIKGVANA 874
I++ + + ++V EYLD + K ++ +F N R+ +++G+A
Sbjct: 63 IVRLQDVVHSEKRLYLVFEYLD----LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIA-- 116
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEA-HVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
Y H ++H D+ +N+L+D A ++DFG+A+ +T T Y A
Sbjct: 117 --YCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRA 171
Query: 934 PEI 936
PEI
Sbjct: 172 PEI 174
|
Length = 294 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 8e-09
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 36/240 (15%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
E+ L + H NI+K+ G CS + ++ EY+ GSL +D + Q +
Sbjct: 56 EINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL----RDYLPKHKLNLAQLLL 111
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW---- 922
+ + ++YLH +H D++++NVLLD++ + DFG+AK + P +
Sbjct: 112 FAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVR 167
Query: 923 -TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981
+ F Y A E + + DV SFGV E++ H S F MI
Sbjct: 168 EDGDSPVFWY-AVECLKENKFSYASDVWSFGVTLYELL--THCDSKQSPP-KKFEEMI-G 222
Query: 982 INQNL------------DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
Q RLP P ++ ++ +M+ C + RPT + + +L
Sbjct: 223 PKQGQMTVVRLIELLERGMRLPCP-KNCPQEVYILMKN---CWETEAKFRPTFRSLIPIL 278
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ 863
+ F ++++ H++++ +G C S +V EY+ GSL T LK + W
Sbjct: 44 ESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW-- 101
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
++ V K +A AL +L L HG++ +KNVLL E + + K +P
Sbjct: 102 KLEVAKQLAWALHFLEDKGLT---HGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 1e-08
Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 18/205 (8%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDE---FLNE---VLALTEIRHR 819
+G+G G V AE +G ++A+K L ++ +DE + E RH
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKA----LKKGDIIARDEVESLMCEKRIFETANSERHP 62
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
++ H V EY G L + D F + + V L YLH
Sbjct: 63 FLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDV----FSEPRAVFYAACVVLGLQYLH 118
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM 939
+ IV+ D+ N+LLD+E ++DFG+ K + F GT + APE+
Sbjct: 119 EN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTE 175
Query: 940 MRATEKYDVHSFGVLALEVIKGNHP 964
T D GVL E++ G P
Sbjct: 176 TSYTRAVDWWGLGVLIYEMLVGESP 200
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 1e-08
Identities = 69/285 (24%), Positives = 119/285 (41%), Gaps = 44/285 (15%)
Query: 767 IGKGRQGSVYKAEL-------PSGII-FAVKKFNSQLLFDEMADQDEFLNEVLALTEI-R 817
+G+G G V AE P+ + AVK S +++D ++E+ + I +
Sbjct: 26 LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 82
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMNVIKG------ 870
H+NII G C+ +++ EY +G+L L+ E+ +N +
Sbjct: 83 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDL 142
Query: 871 ------VANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSN 921
VA + YL C +H D++++NVL+ ++ ++DFG+A+ ++ +
Sbjct: 143 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 198
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980
T + APE T + DV SFGVL E+ G P Y ++
Sbjct: 199 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLK 256
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
E HR+ PS + M + + C P RPT K++
Sbjct: 257 E-----GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQL 292
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 1e-08
Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 23 LGEGCFGQVVMAEALGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 77
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ EY +G+L L+ ++ +
Sbjct: 78 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFK 137
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
++ VA + YL C +H D++++NVL+ + ++DFG+A+ +N
Sbjct: 138 DLVSCTYQVARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDVNNIDYY 193
Query: 922 WTAFAGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
G + APE T + DV SFGVL E+ G P Y +
Sbjct: 194 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 251
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 252 LKE-----GHRMDKPANCTNELYMMMRD----CWHAIPSHRPTFKQL 289
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 2e-08
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF- 824
IGKG G V A + +G A+KK N +F+ ++D L E+ L +RH +I++
Sbjct: 8 IGKGSYGVVCSAIDTHTGEKVAIKKIND--VFEHVSDATRILREIKLLRLLRHPDIVEIK 65
Query: 825 HGFCSNAQHSF----IVSEYLDRGSLTTILKDDAAAKE---FGWNQRMNVIKGVANALSY 877
H ++ F +V E ++ I +D E F Q + AL Y
Sbjct: 66 HIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLL-------RALKY 118
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK--FLN-PHSSNWTAFAGTFGYAAP 934
+H + H D+ KN+L +++ + + DFG+A+ F + P + WT + T Y AP
Sbjct: 119 IHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 175
Query: 935 EI--AHMMRATEKYDVHSFGVLALEVIKG 961
E+ + + T D+ S G + EV+ G
Sbjct: 176 ELCGSFFSKYTPAIDIWSIGCIFAEVLTG 204
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 2e-08
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 761 FGEKYCIGKGRQGSVYKA---ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+ + CIG+G G VYKA G +A+KKF Q E+ L E++
Sbjct: 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSA-CREIALLRELK 60
Query: 818 HRNIIKFHG-FCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
H N++ F +A S +++ +Y + L I+K AK M +++ + N
Sbjct: 61 HENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILN 119
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH----VSDFGIAKFLNPHSSNWTAFAG-- 927
+ YLH + ++H D+ N+L+ E + D G+A+ N A
Sbjct: 120 GVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLK---PLADLD 173
Query: 928 ----TFGYAAPEI 936
T Y APE+
Sbjct: 174 PVVVTIWYRAPEL 186
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 2e-08
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G VYKA +G + A+KK +L + + E+ L E+ H NI+K
Sbjct: 8 IGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELNHPNIVKLL 65
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILK---DDAAAKEFGWNQRMNVIKGVANALSYLH-HD 881
++V E+L + LK D + + + + L++ H H
Sbjct: 66 DVIHTENKLYLVFEFLHQD-----LKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
L H D+ +N+L+++E ++DFG+A+ +T T Y APEI
Sbjct: 121 VL----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 171
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 2e-08
Identities = 65/286 (22%), Positives = 112/286 (39%), Gaps = 48/286 (16%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHR 819
+G+G G V KAE AVK +++D ++E+ + I +H+
Sbjct: 20 LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGKHK 76
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--------- 870
NII G C+ ++V EY G+L L+ E+ +
Sbjct: 77 NIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVS 136
Query: 871 ----VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
VA + +L +H D++++NVL+ +H ++DFG+A+ + H ++
Sbjct: 137 FAYQVARGMEFLASK---KCIHRDLAARNVLVTEDHVMKIADFGLAR--DIHHIDYYRKT 191
Query: 927 GT----FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITE 981
+ APE T + DV SFGVL E+ G P + E
Sbjct: 192 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE---------E 242
Query: 982 INQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ + L +R+ P + + + C E P RPT K++
Sbjct: 243 LFKLLKEGYRMEKPQNCTQELYHLMRD----CWHEVPSQRPTFKQL 284
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 49/296 (16%)
Query: 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQ----------------- 803
F EK +G+G+ G V+ E F+ K F ++ AD
Sbjct: 9 FVEK--LGEGQFGEVHLCEADGLQDFSEKAF----AENDNADAPVLVAVKVLRPDASDNA 62
Query: 804 -DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
++FL EV L+ + NI + G C+ ++ EY++ G L L+ A
Sbjct: 63 REDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLAC 122
Query: 863 QR--------MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914
+ + +A+ + YL VH D++++N L+ + ++DFG+++
Sbjct: 123 NSKSLSFSTLLYMATQIASGMRYLESLNF---VHRDLATRNCLVGKNYTIKIADFGMSR- 178
Query: 915 LNPHSSNWTAFAGT----FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS- 969
N +SS++ G + A E + + T K DV +FGV E++ + Y
Sbjct: 179 -NLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237
Query: 970 TNFSSFSNMITEINQNLDHR--LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
T+ N ++ + LP P D I E+ + C E RPT +
Sbjct: 238 TDQQVIENAG-HFFRDDGRQIYLPRPPNCPKD----IYELMLECWRRDEEDRPTFR 288
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
++++ H ++ HG C + +V E+++ G L L+ + W ++ V + +A
Sbjct: 70 MSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KITVAQQLA 127
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-----G 927
+ALSYL L VHG++ +KN+LL A + I K +P S +TA +
Sbjct: 128 SALSYLEDKNL---VHGNVCAKNILLARLGLAEGTSPFI-KLSDPGVS-FTALSREERVE 182
Query: 928 TFGYAAPE----IAHMMRATEKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMITEI 982
+ APE + A +K+ SFG LE+ G P + E
Sbjct: 183 RIPWIAPECVPGGNSLSTAADKW---SFGTTLLEICFDGEVP-------LKERTPSEKER 232
Query: 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
HRLP PS + L+S CL P RP+ + +
Sbjct: 233 FYEKKHRLPEPSCKELATLIS------QCLTYEPTQRPSFRTI 269
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 2e-08
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 7/199 (3%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V A+ G +AVK +++ + + + L ++H ++ H
Sbjct: 3 IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ + V ++++ G L L+ + + F + +A+AL YLH
Sbjct: 63 YSFQTTEKLYFVLDFVNGGELFFHLQRE---RSFPEPRARFYAAEIASALGYLHS---IN 116
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
IV+ D+ +N+LLDS+ ++DFG+ K S T F GT Y APE+
Sbjct: 117 IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNT 176
Query: 946 YDVHSFGVLALEVIKGNHP 964
D G + E++ G P
Sbjct: 177 VDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 2e-08
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 766 CIGKGRQGSVYKA-ELPSGIIFAVK----KFNSQLLFDE-MADQDEFLNEVLALTEI-RH 818
+G G GSVY A +G + A+K KF S ++E M L EV +L ++ H
Sbjct: 6 QLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMN-----LREVKSLRKLNEH 57
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
NI+K + V EY++ G+L ++KD K F + ++I + L+++
Sbjct: 58 PNIVKLKEVFRENDELYFVFEYME-GNLYQLMKDR-KGKPFSESVIRSIIYQILQGLAHI 115
Query: 879 HHDCLPPIVHG----DISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
H HG D+ +N+L+ ++DFG+A+ + +T + T Y AP
Sbjct: 116 HK-------HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS-RPPYTDYVSTRWYRAP 167
Query: 935 EI 936
EI
Sbjct: 168 EI 169
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 3e-08
Identities = 64/306 (20%), Positives = 114/306 (37%), Gaps = 64/306 (20%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
C + K + P+ + AVKK N L D E++ +++H NI+ +
Sbjct: 9 CFEDLMIVHLAKHK-PTNTLVAVKKIN--LDSCSKEDLKLLQQEIITSRQLQHPNILPYV 65
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF--GWNQRM--NVIKGVANALSYLHHD 881
++VS + GS +LK F G + ++K V NAL Y+H
Sbjct: 66 TSFIVDSELYVVSPLMAYGSCEDLLKT-----HFPEGLPELAIAFILKDVLNALDYIHSK 120
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG--------YAA 933
+H + + ++LL + + +S + + H F + +
Sbjct: 121 ---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHG-KRQRVVHDFPKSSVKNLPWLS 176
Query: 934 PEI--AHMMRATEKYDVHSFGVLA-------------------LEVIKGNHPR------- 965
PE+ ++ EK D++S G+ A LE ++G P
Sbjct: 177 PEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTY 236
Query: 966 ----DYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
D +S + SS N ++DH +R + +E LCL PE+RP+
Sbjct: 237 PLYEDSMSQSRSS--NEHPNNRDSVDH---PYTRTFSEHFHQFVE---LCLQRDPESRPS 288
Query: 1022 MKKVCN 1027
++ N
Sbjct: 289 ASQLLN 294
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEV-LALTEI 816
DD +G+G G V K +P+G I AVK+ + + +Q L ++ +++ +
Sbjct: 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATV---NSQEQKRLLMDLDISMRSV 57
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIK----G 870
+ F+G +I E +D SL D K + + +++
Sbjct: 58 DCPYTVTFYGALFREGDVWICMEVMDT-SL-----DKFYKKVYDKGLTIPEDILGKIAVS 111
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
+ AL YLH ++H D+ NVL++ + + DFGI+ +L S T AG
Sbjct: 112 IVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYL-VDSVAKTIDAGCKP 168
Query: 931 YAAPEIAHMMRATEKYDVH----SFGVLALEVIKGNHPRDYVSTNF 972
Y APE + + YDV S G+ +E+ G P D T F
Sbjct: 169 YMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF 214
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 3e-08
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 34/266 (12%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G VYKA+ +G + A K ++ +E+ D ++ E+ L H I+K
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSE-EELED---YMVEIEILATCNHPYIVKLL 75
Query: 826 GFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G +I+ E+ G++ +L+ D E Q + + + AL YLH
Sbjct: 76 GAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTE---PQIQVICRQMLEALQYLHSM--- 129
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIA----KFLNPHSSNWTAFAGTFGYAAPEIA--H 938
I+H D+ + NVLL + + ++DFG++ K L S F GT + APE+
Sbjct: 130 KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDS----FIGTPYWMAPEVVMCE 185
Query: 939 MMRATE---KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
M+ T K D+ S G+ +E+ + P ++ ++ +I ++ L PS+
Sbjct: 186 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSEPPTLSQPSK 240
Query: 996 DVMDKLMSIMEVAILCLVESPEARPT 1021
M+ ++ A L + PE RP+
Sbjct: 241 WSME-FRDFLKTA---LDKHPETRPS 262
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 3e-08
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 52/285 (18%)
Query: 767 IGKGRQGSVYKAEL--PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G+G GSV + +L G V +L ++ +EFL+E + + H N++K
Sbjct: 7 LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66
Query: 825 HGFC--SNAQHSF----IVSEYLDRGSLTTIL---KDDAAAKEFGWNQRMNVIKGVANAL 875
G C +++ ++ ++ G L + L + ++ + + +A +
Sbjct: 67 IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
YL + +H D++++N +L + V+DFG++K ++G + Y
Sbjct: 127 EYLSNR---NFIHRDLAARNCMLREDMTVCVADFGLSK---------KIYSGDY-YRQGR 173
Query: 936 IAHMMRA------------TEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEI 982
IA M T K DV +FGV E+ +G P V + EI
Sbjct: 174 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---------EI 224
Query: 983 NQNLDH--RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
L H RL P D +D+L +M C P+ RPT K+
Sbjct: 225 YDYLRHGNRLKQPE-DCLDELYDLM---YSCWRADPKDRPTFTKL 265
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL-------TEIRH 818
+G+G G VY ++ +G A K Q+ FD + E EV AL ++H
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAAK----QVQFD--PESPETSKEVSALECEIQLLKNLQH 63
Query: 819 RNIIKFHGFC--SNAQHSF-IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
I++++G C A+ + I EY+ GS+ LK A E + + + +
Sbjct: 64 ERIVQYYG-CLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTE---SVTRKYTRQILEGM 119
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT---AFAGTFGYA 932
SYLH + IVH DI N+L DS + DFG +K L + T + GT +
Sbjct: 120 SYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWM 176
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+PE+ K DV S G +E++ P
Sbjct: 177 SPEVISGEGYGRKADVWSLGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 4e-08
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT-EIR------H 818
+G+G G VY + +G AVK Q+ FD + E EV AL EI+ H
Sbjct: 10 LGQGAFGRVYLCYDADTGRELAVK----QVQFD--PESPETSKEVNALECEIQLLKNLLH 63
Query: 819 RNIIKFHGFCSNAQHSF--IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
I++++G + I E++ GS+ LK A E N + + +S
Sbjct: 64 ERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTE---NVTRKYTRQILEGVS 120
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGYAA 933
YLH + IVH DI N+L DS + DFG +K L + + GT + +
Sbjct: 121 YLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMS 177
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ K D+ S G +E++ P
Sbjct: 178 PEVISGEGYGRKADIWSVGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 55.6 bits (135), Expect = 5e-08
Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 72/279 (25%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG G G V A +G A+KK + +FD++ D L E+ L +RH NII
Sbjct: 8 IGSGAYGVVCSAVDKRTGRKVAIKKIS--NVFDDLIDAKRILREIKLLRHLRHENIIGLL 65
Query: 826 G-FCSNAQHSF----IVSEYLDRGSLTTILK-----DDAAAKEFGWNQRM-NVIKGVANA 874
+ F IV+E ++ L ++K D + F + +++G
Sbjct: 66 DILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQPLTDDHIQYF-----LYQILRG---- 115
Query: 875 LSYLH--HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS---NWTAFAGTF 929
L YLH + ++H D+ N+L++S + + DFG+A+ ++P T + T
Sbjct: 116 LKYLHSAN-----VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTR 170
Query: 930 GYAAPEIAHMM---RATEKYDVHSFGVLALEVI------KGNHPRDYVSTNFSSFSNMIT 980
Y APE+ ++ R T+ D+ S G + E++ G D + N+I
Sbjct: 171 WYRAPEL--LLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQL--------NLIV 220
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR 1019
E+ L TPS + + + S +AR
Sbjct: 221 EV-------LGTPSEEDLKF------------ITSEKAR 240
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 5e-08
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKF 824
IG+G V L + I+A+K +L+ D+ D D E + H ++
Sbjct: 3 IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQASNHPFLVGL 61
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
H F V EY++ G L ++ E ++ AL+YLH
Sbjct: 62 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNYLHER--- 115
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYAAPEIAHMMRAT 943
I++ D+ NVLLDSE ++D+G+ K L P + + F GT Y APEI
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-STFCGTPNYIAPEILRGEDYG 174
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTN 971
D + GVL E++ G P D V ++
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIVGSS 202
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 6e-08
Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT-EI------RH 818
+G+G G VY + +G AVK Q+ FD D E EV AL EI RH
Sbjct: 10 LGRGAFGEVYLCYDADTGRELAVK----QVPFD--PDSQETSKEVNALECEIQLLKNLRH 63
Query: 819 RNIIKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
I++++G + + I EY+ GS+ LK A E N + + +S
Sbjct: 64 DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTE---NVTRRYTRQILQGVS 120
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT---AFAGTFGYAA 933
YLH + IVH DI N+L DS + DFG +K + + T + GT + +
Sbjct: 121 YLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMS 177
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ K DV S +E++ P
Sbjct: 178 PEVISGEGYGRKADVWSVACTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 6e-08
Identities = 75/273 (27%), Positives = 114/273 (41%), Gaps = 33/273 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D GE IG+G G+V K PSG I AVK+ S + DE +Q L ++ + +R
Sbjct: 8 DLGE---IGRGAFGTVNKMLHKPSGTIMAVKRIRSTV--DEK-EQKRLLMDLDVV--MRS 59
Query: 819 RN---IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK--DDAAAKEFGWNQRMNVIKGVAN 873
+ I+KF+G +I E +D SL K + +
Sbjct: 60 SDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVK 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
AL+YL + I+H D+ N+LLD + DFGI+ L S T AG Y A
Sbjct: 119 ALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMA 175
Query: 934 PE-IAHMMRATEKYDVH----SFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
PE I R + YDV S G+ EV G P + ++++ ++ Q +
Sbjct: 176 PERIDPSAR--DGYDVRSDVWSLGITLYEVATGKFP-------YPKWNSVFDQLTQVVKG 226
Query: 989 RLPT-PSRDVMDKLMSIMEVAILCLVESPEARP 1020
P + + + S + LCL++ RP
Sbjct: 227 DPPILSNSEEREFSPSFVNFINLCLIKDESKRP 259
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 6e-08
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF- 824
IG G QG V A + GI AVKK + F E++ L + H+NII
Sbjct: 29 IGSGAQGIVCAAFDTVLGINVAVKKLSRP--FQNQTHAKRAYRELVLLKCVNHKNIISLL 86
Query: 825 -----HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN-VIKGVANALSYL 878
Q ++V E +D +L ++ + ++RM+ ++ + + +L
Sbjct: 87 NVFTPQKSLEEFQDVYLVMELMD-ANLCQVIHMELD------HERMSYLLYQMLCGIKHL 139
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPEI 936
H I+H D+ N+++ S+ + DFG+A+ +N+ T + T Y APE+
Sbjct: 140 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEV 193
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
M E D+ S G + E++KG S F ++ I + N+ ++ +L TPS +
Sbjct: 194 ILGMGYKENVDIWSVGCIMGELVKG-------SVIFQG-TDHIDQWNKVIE-QLGTPSAE 244
Query: 997 VMDKLM 1002
M++L
Sbjct: 245 FMNRLQ 250
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 7e-08
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNII 822
IG+G G+VYKA +L +G A+KK L E L E+ L ++ H NI+
Sbjct: 7 IGEGAYGTVYKARDLNTGRFVALKKVRVPL--SEEGIPLSTLREIALLKQLESFEHPNIV 64
Query: 823 KFHGFCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ C + +V E++D+ L T L ++++ + + +
Sbjct: 65 RLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYL-SKCPKPGLPPETIKDLMRQLLRGVDF 122
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
LH IVH D+ +N+L+ S+ + ++DFG+A+ + + T+ T Y APE+
Sbjct: 123 LHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA-LTSVVVTLWYRAPEV 177
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 7e-08
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKF---NSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VYKA + +G + A+KK N + F A + E+ L ++ HRNI+
Sbjct: 15 IGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITA-----IREIKILRQLNHRNIV 69
Query: 823 KFHGFCSNAQHS----------FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
++ Q + ++V EY+D L +L ++ F + + +K +
Sbjct: 70 NLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLL--ESGLVHFSEDHIKSFMKQLL 126
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-WTAFAGTFGY 931
L+Y H +H DI N+LL+++ + ++DFG+A+ N S +T T Y
Sbjct: 127 EGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWY 183
Query: 932 AAPEIAHMMRATEKY----DVHSFG 952
PE ++ E+Y DV S G
Sbjct: 184 RPPE---LLLGEERYGPAIDVWSCG 205
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 8e-08
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 14 LGQGSFGMVYEG-IAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 69
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-------VA 872
++++ G S Q + ++ E + RG L + L+ E Q +K +A
Sbjct: 70 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIA 129
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 130 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 184
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 185 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 214
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 68/284 (23%), Positives = 118/284 (41%), Gaps = 50/284 (17%)
Query: 767 IGKGRQGSVYKAEL-PSGIIF--AVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNII 822
IG+G G V KA + G+ A+K+ + D +F E+ L ++ H NII
Sbjct: 15 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEVLCKLGHHPNII 71
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSL------TTILKDDAA-------AKEFGWNQRMNVIK 869
G C + + ++ EY G+L + +L+ D A A Q ++
Sbjct: 72 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 131
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
VA + YL +H D++++N+L+ + A ++DFG+++ T
Sbjct: 132 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTM 182
Query: 930 G-----YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI-TEIN 983
G + A E + T DV S+GVL E+ VS + + M E+
Sbjct: 183 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI---------VSLGGTPYCGMTCAELY 233
Query: 984 QNL--DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ L +RL P + D++ +M C E P RP+ ++
Sbjct: 234 EKLPQGYRLEKP-LNCDDEVYDLMR---QCWREKPYERPSFAQI 273
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 1e-07
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 23/154 (14%)
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ N IK + + + ++ +Y+ G L +LK + E + +I+ + AL+
Sbjct: 68 NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSE---AEVKKIIRQLVEALND 124
Query: 878 LH-HDCLPPIVHGDISSKNVLLD-SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
LH H+ I+H DI +NVL D ++ ++ D+G+ K + S + GT Y +PE
Sbjct: 125 LHKHN----IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSC----YDGTLDYFSPE 176
Query: 936 -IAHMMRATEKYDVH----SFGVLALEVIKGNHP 964
I YDV + GVL E++ G HP
Sbjct: 177 KIKG-----HNYDVSFDWWAVGVLTYELLTGKHP 205
|
Length = 267 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 2e-07
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYA 932
AL +LH IV+ DI +N+LLDSE ++DFG++K FL+ +F GT Y
Sbjct: 117 ALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYM 173
Query: 933 APEIAHMMRATEK-YDVHSFGVLALEVIKGNHP--RDYVSTNFSSFSNMITEINQNLDHR 989
APEI K D S G+L E++ G P + S S I + +
Sbjct: 174 APEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSF 233
Query: 990 LPTPSRDVMDKLM 1002
+ ++D++ KL+
Sbjct: 234 IGPEAQDLLHKLL 246
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 2e-07
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 767 IGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V A+ S G +AVK + + + + L ++H ++ H
Sbjct: 3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VANALSYLHHDCLP 884
A+ + V +Y++ G L L+ + E R VA+A+ YLH
Sbjct: 63 YSFQTAEKLYFVLDYVNGGELFFHLQRERCFLE----PRARFYAAEVASAIGYLHS---L 115
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
I++ D+ +N+LLDS+ ++DFG+ K + F GT Y APE+
Sbjct: 116 NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDR 175
Query: 945 KYDVHSFGVLALEVIKGNHP 964
D G + E++ G P
Sbjct: 176 TVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 13/203 (6%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G G VYKA+ + A K +E+ D ++ E+ L H NI+K
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELED---YMVEIDILASCDHPNIVKLLD 69
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ +I+ E+ G++ ++ + + Q V K AL+YLH + I
Sbjct: 70 AFYYENNLWILIEFCAGGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHEN---KI 124
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE-- 944
+H D+ + N+L + + ++DFG++ +F GT + APE+ + +
Sbjct: 125 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 184
Query: 945 ---KYDVHSFGVLALEVIKGNHP 964
K DV S G+ +E+ + P
Sbjct: 185 YDYKADVWSLGITLIEMAQIEPP 207
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 2e-07
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 16/188 (8%)
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
L E + L + H ++I+ + + +V + L T L + + +Q +
Sbjct: 105 LIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY-SSDLYTYLTKRS--RPLPIDQALI 161
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
+ K + L YLH I+H D+ ++N+ ++ + + D G A+F + + A
Sbjct: 162 IEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQF-PVVAPAFLGLA 217
Query: 927 GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNH---------PRDYVSTNFSSFSN 977
GT APE+ + K D+ S G++ E++ P +YV + S
Sbjct: 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLK 277
Query: 978 MITEINQN 985
+I+ + +
Sbjct: 278 IISTLKVH 285
|
Length = 357 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 2e-07
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 30/182 (16%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLN-----EVLALTEIRHRN 820
+G+G VYKA +G I A+KK E + + +N E+ L E++H N
Sbjct: 8 LGEGTYAVVYKARDKETGRIVAIKKIKLG----ERKEAKDGINFTALREIKLLQELKHPN 63
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD------DAAAKEFGWNQRMNVIKGVANA 874
II + + +V E+++ L ++KD A K + M +
Sbjct: 64 IIGLLDVFGHKSNINLVFEFME-TDLEKVIKDKSIVLTPADIKSY-----MLMT---LRG 114
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYAA 933
L YLH + I+H D+ N+L+ S+ ++DFG+A+ F +P+ T T Y A
Sbjct: 115 LEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-RKMTHQVVTRWYRA 170
Query: 934 PE 935
PE
Sbjct: 171 PE 172
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 2e-07
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALTEI 816
DF +GKG G V AE + ++A+K ++ + D + + E VLAL
Sbjct: 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQD-DDVECTMVEKRVLALPG- 58
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
+ + + H + V EY++ G L ++ KE + +A L
Sbjct: 59 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKE---PHAVFYAAEIAIGLF 115
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYAAPE 935
+LH I++ D+ NV+LD+E ++DFG+ K + + T F GT Y APE
Sbjct: 116 FLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT-FCGTPDYIAPE 171
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRD 966
I + D +FGVL E++ G P D
Sbjct: 172 IIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 202
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 2e-07
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 30/185 (16%)
Query: 763 EKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEVLALTEI 816
EK IG+G G VYKA + +G I A+KK + +DE + E+ L E+
Sbjct: 5 EK--IGEGTYGVVYKARDKLTGEIVALKKI-------RLETEDEGVPSTAIREISLLKEL 55
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VA 872
H NI++ + ++V E+LD + K ++ G + + IK +
Sbjct: 56 NHPNIVRLLDVVHSENKLYLVFEFLD----LDLKKYMDSSPLTGLDPPL--IKSYLYQLL 109
Query: 873 NALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
++Y H H ++H D+ +N+L+D E ++DFG+A+ +T T Y
Sbjct: 110 QGIAYCHSHR----VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWY 165
Query: 932 AAPEI 936
APEI
Sbjct: 166 RAPEI 170
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFL----NEVLALTEIRHRNI 821
IGKG G V+K +G AVK + D + D DE + N + AL++ H N+
Sbjct: 26 IGKGTYGKVFKVLNKKNGSKAAVK------ILDPIHDIDEEIEAEYNILKALSD--HPNV 77
Query: 822 IKFHGF-----CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN--VIKGVAN- 873
+KF+G N ++V E + GS+T ++K E RM +I + +
Sbjct: 78 VKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGE-----RMEEPIIAYILHE 132
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
AL L H + +H D+ N+LL +E + DFG++ L GT + A
Sbjct: 133 ALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMA 192
Query: 934 PEI---AHMMRAT--EKYDVHSFGVLALEVIKGNHP 964
PE+ + +T + DV S G+ A+E+ G+ P
Sbjct: 193 PEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPP 228
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG G V A L SG ++AVK ++ + D E +TE R ++ + H
Sbjct: 3 LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQD--DDVE-----CTMTEKRILSLARNH 55
Query: 826 GFCSN-------AQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKGVAN 873
F + F V E+++ G L ++ D+A A+ + + +
Sbjct: 56 PFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE--------ITS 107
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
AL +LH I++ D+ NVLLD E ++DFG+ K + + F GT Y A
Sbjct: 108 ALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIA 164
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PEI M D + GVL E++ G+ P
Sbjct: 165 PEILQEMLYGPSVDWWAMGVLLYEMLCGHAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNII 822
IG G G+VYKA + SG A+K Q +E + EV L + H NI+
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQT--NEDGLPLSTVREVALLKRLEAFDHPNIV 65
Query: 823 KFHGFCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ C+ ++ +V E++D+ L T L D ++++ L +
Sbjct: 66 RLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYL-DKVPPPGLPAETIKDLMRQFLRGLDF 123
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH +C IVH D+ +N+L+ S + ++DFG+A+ + + T T Y APE+
Sbjct: 124 LHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA-LTPVVVTLWYRAPEVL 179
Query: 938 HMMRATEKYDVHSFGVLALEVIK 960
D+ S G + E+ +
Sbjct: 180 LQSTYATPVDMWSVGCIFAEMFR 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 2e-07
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 15/159 (9%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN----- 862
NE+LAL + H NI+K + +++++++ D L + + D+A F W
Sbjct: 212 NEILALGRLNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEA----FDWKDRPLL 266
Query: 863 -QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA-KFLNPHSS 920
Q ++K + A+ Y+H L +H DI +N+ L+ + + + DFG A F +
Sbjct: 267 KQTRAIMKQLLCAVEYIHDKKL---IHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA 323
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
+ GT +PEI E D+ S G++ L+++
Sbjct: 324 FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDML 362
|
Length = 501 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 871 VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+ AL YL H ++H D+ N+LLD+ + DFGI+ L + T AG
Sbjct: 123 IVKALHYLKEKHG----VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK-TRSAGC 177
Query: 929 FGYAAPEIAHMMRATEKYDVH----SFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ 984
Y APE KYD+ S G+ +E+ G P T F ++T+I
Sbjct: 178 AAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE----VLTKI-- 231
Query: 985 NLDHRLPTPSRDVMDKLMSIM--EVAILCLVESPEARPTMKK 1024
L P+ ++ S LCL + RP ++
Sbjct: 232 -LQEEPPSLP---PNEGFSPDFCSFVDLCLTKDHRKRPKYRE 269
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
NE L + H NII+++ + IV EY G+L ++ +
Sbjct: 47 QNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNS----LLDEDT 102
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-AHVSDFGIAKFLNPHSSNWTAF 925
++ L LHH I+H D+ ++N+LLD + DFGI+K L+ S +T
Sbjct: 103 ILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTV- 161
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
GT Y +PE+ +K D+ + G + E+
Sbjct: 162 VGTPCYISPELCEGKPYNQKSDIWALGCVLYEL 194
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 806 FLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM 865
F + ++ H++I+ +G C + +V E+++ G L + + W +
Sbjct: 51 FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPW--KF 108
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901
V K +A+ALSYL L VHG++ +KN+LL E
Sbjct: 109 KVAKQLASALSYLEDKDL---VHGNVCTKNILLARE 141
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 4e-07
Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 57/294 (19%)
Query: 767 IGKGRQGSVYKAEL-------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+ R G VYK L + + A+K + E ++EF +E + + ++H
Sbjct: 13 LGEDRFGKVYKGHLFGTAPGEQTQAV-AIKTLKDKA---EGPLREEFKHEAMMRSRLQHP 68
Query: 820 NIIKFHG-------------FCSNAQ-HSFIV--SEYLDRGSLTTILKDDAAAKE-FGWN 862
NI+ G +CS++ H F+V S + D GS DD K
Sbjct: 69 NIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGST----DDDKTVKSTLEPA 124
Query: 863 QRMNVIKGVANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920
++++ +A + +L HH +VH D++++NVL+ + +SD G+ F +++
Sbjct: 125 DFVHIVTQIAAGMEFLSSHH-----VVHKDLATRNVLVFDKLNVKISDLGL--FREVYAA 177
Query: 921 NWTAFAGT----FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS 976
++ G + +PE + + D+ S+GV+ EV Y + +S
Sbjct: 178 DYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFS------YGLQPYCGYS 231
Query: 977 NM-ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
N + E+ +N LP P D + + + C E P RP K + + L
Sbjct: 232 NQDVIEMIRN-RQVLPCPD----DCPAWVYTLMLECWNEFPSRRPRFKDIHSRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 47.5 bits (114), Expect = 4e-07
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 582 HLSELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNE 640
+L LDLS+N L IP + +L+ L+LS NNL + P F + SL +D++ N
Sbjct: 1 NLKSLDLSNNRLT-VIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 641 L 641
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 5e-07
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+GKG G V++ +G IFA+K + D E L ++H I+
Sbjct: 4 LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+++ EYL G L L+ + E + + ++ AL +LH
Sbjct: 64 DLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFME---DTACFYLSEISLALEHLHQQ- 119
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I++ D+ +N+LLD++ ++DFG+ K + F GT Y APEI +MR+
Sbjct: 120 --GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEI--LMRS 175
Query: 943 TEKYDVH--SFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000
V S G L +++ G P + + N + I + NL L +RD++ K
Sbjct: 176 GHGKAVDWWSLGALMYDMLTGAPP--FTAENRKKTIDKILKGKLNLPPYLTPEARDLLKK 233
Query: 1001 LM 1002
L+
Sbjct: 234 LL 235
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 5e-07
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 9/209 (4%)
Query: 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLF-DEMADQDEFLNEVLALTEIR 817
DF +GKG G V AE + ++A+K ++ D+ + VLAL+ +
Sbjct: 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-K 59
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ + H + V EY++ G L ++ KE + +A L +
Sbjct: 60 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKE---PHAVFYAAEIAIGLFF 116
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH I++ D+ NV+LDSE ++DFG+ K F GT Y APEI
Sbjct: 117 LHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEII 173
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRD 966
+ D +FGVL E++ G P +
Sbjct: 174 AYQPYGKSVDWWAFGVLLYEMLAGQAPFE 202
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 5e-07
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L LH + IV+ D+ +N+LLD +SD G+A + P GT GY A
Sbjct: 114 GLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMA 169
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ R T D + G L E+I G P
Sbjct: 170 PEVVKNERYTFSPDWWALGCLLYEMIAGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 6e-07
Identities = 22/57 (38%), Positives = 27/57 (47%)
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L+ LDLS N+L+ + L L L+LS N P F L L LDLS N
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGN 58
|
Length = 60 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 6e-07
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALTEIRHRNIIK 823
+GKG G V E SG +A+K +++ DE+A L E L RH
Sbjct: 3 LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHT---LTESRVLKNTRHP---- 55
Query: 824 FHGFCSNAQHSF-------IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
F ++ ++SF V EY++ G L L + + F ++ + +AL
Sbjct: 56 ---FLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRE---RVFSEDRTRFYGAEIVSALD 109
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH IV+ D+ +N++LD + ++DFG+ K ++ F GT Y APE+
Sbjct: 110 YLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEV 166
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
D GV+ E++ G P
Sbjct: 167 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 7e-07
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLF 426
+ L L L G IP+ I L L +N+ N + G IP S ++TSLE L + N+
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN 479
Query: 427 GKVYEAFGDHPNLTFLDLSQNNLYGEI 453
G + E+ G +L L+L+ N+L G +
Sbjct: 480 GSIPESLGQLTSLRILNLNGNSLSGRV 506
|
Length = 623 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 8e-07
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 767 IGKGRQGSVYKAELPSG-IIFAVKKFNSQLLFDEMADQD-EFLNEVLALTEIRHRN--II 822
IG+G V L I+A+K +L+ D D+D +++ + E N ++
Sbjct: 3 IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD---DEDIDWVQTEKHVFEQASSNPFLV 59
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
H F+V EY++ G L ++ E + R + + AL++LH
Sbjct: 60 GLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPE--EHARFYAAE-ICIALNFLHER- 115
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
I++ D+ NVLLD++ ++D+G+ K L P + T F GT Y APEI
Sbjct: 116 --GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST-FCGTPNYIAPEILRGEE 172
Query: 942 ATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
D + GVL E++ G P D ++ N
Sbjct: 173 YGFSVDWWALGVLMFEMMAGRSPFDIITDN 202
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 9e-07
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKN 895
++ +Y++ G L T L + F ++ I + AL +LH I++ DI +N
Sbjct: 82 LILDYVNGGELFTHL---YQREHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLEN 135
Query: 896 VLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKY----DVHS 950
+LLDSE ++DFG++K FL +F GT Y APE+ + + + D S
Sbjct: 136 ILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEV--IRGGSGGHDKAVDWWS 193
Query: 951 FGVLALEVIKGNHP--RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
GVL E++ G P D + S S I + + +RD + KL+
Sbjct: 194 LGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLL 247
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 767 IGKGRQGSVYKAELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN-I 821
+G G G V+ SG ++A+K + + + E L IR +
Sbjct: 8 LGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 67
Query: 822 IKFH-GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VANALSYLH 879
+ H F ++ + I+ +Y++ G L T L KE Q + + G + AL +LH
Sbjct: 68 VTLHYAFQTDTKLHLIL-DYINGGELFTHLSQRERFKE----QEVQIYSGEIVLALEHLH 122
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYAAPEIAH 938
I++ DI +N+LLDS ++DFG++K F +F GT Y AP+I
Sbjct: 123 K---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVR 179
Query: 939 MMRA--TEKYDVHSFGVLALEVIKGNHP 964
+ D S GVL E++ G P
Sbjct: 180 GGDGGHDKAVDWWSMGVLMYELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 1e-06
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 12/221 (5%)
Query: 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
DF +G G G V A+ +G +A+K + + +M E L E+ H
Sbjct: 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL-KMKQVQHVAQEKSILMELSH 77
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
I+ + + + E++ G L T L+ A F + + A YL
Sbjct: 78 PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLR---KAGRFPNDVAKFYHAELVLAFEYL 134
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH 938
H I++ D+ +N+LLD++ V+DFG AK + + GT Y APE+
Sbjct: 135 HSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT---FTLCGTPEYLAPEVIQ 188
Query: 939 MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979
+ D + GVL E I G +P + T F + ++
Sbjct: 189 SKGHGKAVDWWTMGVLLYEFIAG-YPPFFDDTPFRIYEKIL 228
|
Length = 329 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
IV+ D+ +NVLLD +SD G+A L AGT GY APE+
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLAVEL-KGGKKIKGRAGTPGYMAPEVLQGEVYDFS 174
Query: 946 YDVHSFGVLALEVIKGNHP-RDY-VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
D + G E+I G P R E+ + ++D+ + L+
Sbjct: 175 VDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALL 233
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 20/216 (9%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD-DAAAKEFGWNQRMNV 867
E L+++ H I+KFH I++EY + L L++ K NQ
Sbjct: 52 EAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEW 111
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
+ + Y+H I+H D+ +KN+ L + + DFG+++ L T F G
Sbjct: 112 FIQLLLGVHYMHQR---RILHRDLKAKNIFL-KNNLLKIGDFGVSRLLMGSCDLATTFTG 167
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987
T Y +PE K D+ S G + E+ H + NF S I E
Sbjct: 168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHA--FEGQNFLSVVLRIVE------ 219
Query: 988 HRLPTPS--RDVMDKLMSIMEVAILCLVESPEARPT 1021
PTPS +L SIM+ L + P RP+
Sbjct: 220 --GPTPSLPETYSRQLNSIMQSM---LNKDPSLRPS 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 46/287 (16%)
Query: 767 IGKGRQGSVYKAELPSGIIFA---VKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G G V E+ SG A VK+ + +Q +FL E ++H N+++
Sbjct: 3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSA---SVQEQMKFLEEAQPYRSLQHSNLLQ 59
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN----QRMNVIKGVANALSYLH 879
G C+ +V E+ G L L+ A+ + QRM +A L +LH
Sbjct: 60 CLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMAC--EIALGLLHLH 117
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-------FLNPHSSNWTAFAGTFGYA 932
+ +H D++ +N LL ++ + D+G++ ++ P W +
Sbjct: 118 KN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP-DQLWVPLR----WI 169
Query: 933 APEIAHMMRA-------TEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
APE+ + T++ +V S GV E+ + G+ P ++S ++T +
Sbjct: 170 APELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE-----QVLTYTVR 224
Query: 985 NLDHRLPTPSRDV--MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+LP P + D+ +M+ L PE RP+ ++V LL
Sbjct: 225 EQQLKLPKPRLKLPLSDRWYEVMQFCWL----QPEQRPSAEEVHLLL 267
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 62/292 (21%), Positives = 117/292 (40%), Gaps = 43/292 (14%)
Query: 755 IKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
++ +++ GE GK +G +Y + + A+K + EF E +
Sbjct: 7 VRFMEELGEC-AFGKIYKGHLYLPGMDHAQLVAIKTLKD---INNPQQWGEFQQEASLMA 62
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTIL--------------KDDAAAKEFG 860
E+ H NI+ G + Q ++ EYL++G L L +D
Sbjct: 63 ELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLD 122
Query: 861 WNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920
+++ +A + YL VH D++++N+L+ + +SD G+++ + +S+
Sbjct: 123 HGDFLHIAIQIAAGMEYLSSHFF---VHKDLAARNILIGEQLHVKISDLGLSREI--YSA 177
Query: 921 NWTAFAGT----FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSF 975
++ + PE + + D+ SFGV+ E+ G P + F
Sbjct: 178 DYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQP-------YYGF 230
Query: 976 SNMITEINQNLDHR--LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
SN E+ + + R LP D ++ S+M C E P RP K +
Sbjct: 231 SNQ--EVIEMVRKRQLLPCS-EDCPPRMYSLMTE---CWQEGPSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 36/166 (21%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+++FL E+ ++ +++ NII+ G C + +++EY++ G L L F
Sbjct: 61 RNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHA 120
Query: 863 Q------RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916
N++ S + + VH D++++N L+ + + ++DFG+++ N
Sbjct: 121 NNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSR--N 178
Query: 917 PHSSNWTAFAG----TFGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+S ++ G + A E + + T DV +FGV E+
Sbjct: 179 LYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEM 224
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 3e-06
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 51/279 (18%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDE----MADQD-----EFLNEVLALTEIR 817
+G+G ++YK L + + + D F ++++
Sbjct: 3 LGQGTFTNIYKGVL---RVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLS 59
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H++++K +G C + +V EY+ G L L + W +++V K +A+AL Y
Sbjct: 60 HKHLVKLYGVCV-RDENIMVEEYVKFGPLDVFLHREKNNVSLHW--KLDVAKQLASALHY 116
Query: 878 LHHDCLPPIVHGDISSKNVLL--DSEHE-----AHVSDFGIAKFLNPHS-----SNWTAF 925
L +VHG++ KN+L+ +E +SD GI + W A
Sbjct: 117 LEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAP 173
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQ 984
A + A +K+ SFG LE+ G P S+ S+ E
Sbjct: 174 E----CIRNGQASLTIAADKW---SFGTTLLEICSNGEEP-------LSTLSSSEKERFY 219
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
HRLP P + L++ C P RP+ +
Sbjct: 220 QDQHRLPMPDCAELANLIN------QCWTYDPTKRPSFR 252
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L LH + V+ D+ +N+LLD +SD G+A + P + GT GY A
Sbjct: 114 GLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKI-PEGESIRGRVGTVGYMA 169
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ + R T D G L E+I+G P
Sbjct: 170 PEVLNNQRYTLSPDYWGLGCLIYEMIEGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 4e-06
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSA 542
+ L+LSSN ++ +P +L SL+ L + S +L L LDL+
Sbjct: 45 VAVNRLALNLSSNTLL-LLPSSLSRLLSLDLLSPSGIS-SLDGSENLLNLLPLPSLDLNL 102
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQIC 602
N+L S+I + + L+ L L+L NN P +L ELDLS N ++ +P +
Sbjct: 103 NRLRSNISELL-ELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLR 160
Query: 603 NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLME 657
N+ +L+ L+LS N+L DL + +L+ +D++ N++ +P L E
Sbjct: 161 NLPNLKNLDLSFNDLSDLPKL-LSNLSNLNNLDLSGNKIS-DLPPEIELLSALEE 213
|
Length = 394 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 4e-06
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 41/223 (18%)
Query: 767 IGKGRQGSVYKAELPSGI------IFAVKKFNSQLLFDEMAD--QDEFLNEVLALTEIRH 818
IG+G G V++A P + + AVK +L +E + Q +F E + E H
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVK-----MLKEEASADMQADFQREAALMAEFDH 67
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------------DDAAAKEFGWN---- 862
NI+K G C+ + ++ EY+ G L L+ ++A++ G N
Sbjct: 68 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPL 127
Query: 863 ---QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+++ + K VA ++YL VH D++++N L+ ++DFG+++ N +S
Sbjct: 128 SCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR--NIYS 182
Query: 920 SNWTAFAGT----FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+++ + + PE R T + DV ++GV+ E+
Sbjct: 183 ADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 225
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 4e-06
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 60/280 (21%)
Query: 749 FLYEEIIKAIDDFGEKY----CIGKGRQGSV-YKAELPSGIIFAVKK----FNSQLLFDE 799
+ +E+ K I + ++Y +G G G+V + +G A+KK F S+L F +
Sbjct: 1 YYRQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL-FAK 59
Query: 800 MADQDEFLNEVLALTEIRHRNII-------------KFHGFCSNAQHSFIVSEYLDRGSL 846
A E+ L ++H N+I +FH F ++V ++ L
Sbjct: 60 RA-----YRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF-------YLVMPFMGT-DL 106
Query: 847 TTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906
++K + +++ ++KG L Y+H I+H D+ N+ ++ + E +
Sbjct: 107 GKLMKHEKLSEDRIQFLVYQMLKG----LKYIHA---AGIIHRDLKPGNLAVNEDCELKI 159
Query: 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRATEKYDVHSFGVLALEVIKGNHPR 965
DFG+A+ + S T + T Y APE I + M T+ D+ S G + E++ G
Sbjct: 160 LDFGLARQTD---SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK--- 213
Query: 966 DYVSTNF--SSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
F + + EI + TPS++ + KL S
Sbjct: 214 ----PLFKGHDHLDQLMEIMKVTG----TPSKEFVQKLQS 245
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 5e-06
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 749 FLYEEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 3 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 60
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 61 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 117
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ H+
Sbjct: 118 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HT 170
Query: 920 SN-WTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKG 961
+ T + T Y APEI + M + D+ S G + E++ G
Sbjct: 171 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 214
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 5e-06
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 45/243 (18%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKK----FNSQLLFDE 799
F EE+ K + + E+Y +G G GSV A + +G A+KK F S++ F +
Sbjct: 1 FYREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEI-FAK 59
Query: 800 MADQDEFLNEVLALTEIRHRNIIK----------FHGFCSNAQHSFIVSEYLDRGSLTTI 849
A E+ L ++H N+I F Q ++V Y+ + L I
Sbjct: 60 RA-----YRELTLLKHMQHENVIGLLDVFTSAVSGDEF----QDFYLVMPYM-QTDLQKI 109
Query: 850 LKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909
+ ++ ++ + L Y+H I+H D+ N+ ++ + E + DF
Sbjct: 110 M-----GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDF 161
Query: 910 GIAKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRATEKYDVHSFGVLALEVIKGN---HPR 965
G+A+ + + T + T Y APE I + M + D+ S G + E++ G +
Sbjct: 162 GLARHAD---AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218
Query: 966 DYV 968
DY+
Sbjct: 219 DYL 221
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 6e-06
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYA 932
AL++LH I++ D+ NVLLD+E ++D+G+ K + P + T F GT Y
Sbjct: 108 ALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST-FCGTPNYI 163
Query: 933 APEIAHMMRATEKYDVH----SFGVLALEVIKGNHPRDYVSTN 971
APEI +R E Y + GVL E++ G P D V +
Sbjct: 164 APEI---LRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMS 202
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 7e-06
Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 45/277 (16%)
Query: 767 IGKGRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G+G GSV + +L S + AVK ++ ++ ++FL+E + + E H N+++
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTM--KIAICTRSEMEDFLSEAVCMKEFDHPNVMR 64
Query: 824 FHGFCSNAQHS------FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
G C S ++ ++ G L + L + ++K + + S
Sbjct: 65 LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ + +H D++++N +L+ V+DFG++K + + G + Y IA
Sbjct: 125 MEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKI---------YNGDY-YRQGRIA 174
Query: 938 HM------------MRATEKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMITEINQ 984
M T K DV SFGV E+ +G P Y S + + + N
Sbjct: 175 KMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP--YPGVENSEIYDYLRQGN- 231
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
RL P D +D L S+M C + +P+ RP+
Sbjct: 232 ----RLKQPP-DCLDGLYSLMSS---CWLLNPKDRPS 260
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 8e-06
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLN---PHSSNWTAFAGTFGYAAPEIAHMMRA 942
+V+ D+ N+LLD +SD G+A + PH+S GT GY APE+ A
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 172
Query: 943 TEKY-DVHSFGVLALEVIKGNHP-RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000
+ D S G + ++++G+ P R + + + M + L R +++
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 232
Query: 1001 LMS 1003
L+
Sbjct: 233 LLQ 235
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 8e-06
Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 34/263 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFN-SQLLFDEMADQDEFLNEVLALTEI 816
DF K +G+G G V E +G I+A+K S LL E E ++L++
Sbjct: 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSI--- 57
Query: 817 RHRN---IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK--DDAAAKEFGWNQRMNVIKGV 871
N I + + + ++V EY G L ++L +D +F + + +
Sbjct: 58 --SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYED----QFDEDMAQFYLAEL 111
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA----G 927
A+ +H VH DI +NVL+D ++DFG A L +N + G
Sbjct: 112 VLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLT---ANKMVNSKLPVG 165
Query: 928 TFGYAAPEIAHMMRATEK--YDVH----SFGVLALEVIKGNHP--RDYVSTNFSSFSNMI 979
T Y APE+ M K Y V S GV+A E+I G P + +++ N
Sbjct: 166 TPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ 225
Query: 980 TEINQNLDHRLPTPSRDVMDKLM 1002
+ D ++ + D++ L+
Sbjct: 226 RFLKFPEDPKVSSDFLDLIQSLL 248
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 9e-06
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G VY+ + + I+A+K + + + + + + I R ++
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-----AKKEVAHTIGERNILVRTLLDES 55
Query: 826 GFCSNAQHSF-------IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV-IKGVANALSY 877
F + SF +V++Y+ G L L+ + E R I + AL +
Sbjct: 56 PFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSE----DRAKFYIAELVLALEH 111
Query: 878 LH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
LH +D IV+ D+ +N+LLD+ + DFG++K + F GT Y APE+
Sbjct: 112 LHKYD----IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEV 167
Query: 937 AHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
+ T+ D S GVL E+ G P
Sbjct: 168 LLDEKGYTKHVDFWSLGVLVFEMCCGWSP 196
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 1e-05
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 45/227 (19%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKF----------NSQLLFDEMADQDEFLNEVLALTE 815
+G+G G V KA +G I A+KK + L L E+ + E
Sbjct: 17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76
Query: 816 IRHRNIIKFHG-FCSNAQHSFI--VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
I+H NI+ + + FI V + + L ++ E +Q ++ +
Sbjct: 77 IKHENIMGLVDVYV---EGDFINLVMDIMA-SDLKKVVDRKIRLTE---SQVKCILLQIL 129
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA-KFLNPHSS----------- 920
N L+ LH +H D+S N+ ++S+ ++DFG+A ++ P S
Sbjct: 130 NGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQR 186
Query: 921 --NWTAFAGTFGYAAPEIAHMMRATEKY----DVHSFGVLALEVIKG 961
T+ T Y APE ++ EKY D+ S G + E++ G
Sbjct: 187 REEMTSKVVTLWYRAPE---LLMGAEKYHFAVDMWSVGCIFAELLTG 230
|
Length = 335 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 1e-05
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 36/273 (13%)
Query: 767 IGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+GKG GSV +A+L S AVK + + +D +EFL E + E H N+I
Sbjct: 7 LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS--SDIEEFLREAACMKEFDHPNVI 64
Query: 823 KFHGFC--SNAQHSF----IVSEYLDRGSLTTILKDDAAAKE-FGWNQRMNV--IKGVAN 873
K G S A+ ++ ++ G L T L +E F + V + +A+
Sbjct: 65 KLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIAS 124
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
+ YL +H D++++N +L+ V+DFG++K + +S ++
Sbjct: 125 GMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSKKI--YSGDYYRQGCASKLPV 179
Query: 934 PEIAHMMRATEKYDVHS----FGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDH 988
+A A Y HS FGV E++ +G P Y S N + + N
Sbjct: 180 KWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP--YAGVENSEIYNYLIKGN----- 232
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
RL P D ++ + +M C P+ RP+
Sbjct: 233 RLKQPP-DCLEDVYELM---CQCWSPEPKCRPS 261
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (116), Expect = 1e-05
Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 65/294 (22%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMA---------DQDEFLNEVLALTEIR 817
IG GR G V F VK +Q F A ++ + + EV + E++
Sbjct: 21 IGNGRFGEV----------FLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK 70
Query: 818 HRNIIKF-HGFCSNA-QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR---MNVIKGVA 872
H+NI+++ F + A Q +I+ E+ D G L+ ++ K FG + +++ + +
Sbjct: 71 HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQK--CYKMFGKIEEHAIVDITRQLL 128
Query: 873 NALSYLHHDCLPP----IVHGDISSKNVLLDSEHE-----------------AHVSDFGI 911
+AL+Y H+ P ++H D+ +N+ L + A + DFG+
Sbjct: 129 HALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGL 188
Query: 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHS----FGVLALEVIKGNHPRDY 967
+K + S + GT Y +PE+ ++ T+ YD S G + E+ G P +
Sbjct: 189 SKNIGIESMAHSC-VGTPYYWSPEL--LLHETKSYDDKSDMWALGCIIYELCSGKTP--F 243
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
N +FS +I+E+ + D LP + K ++I+ +L L S + RP+
Sbjct: 244 HKAN--NFSQLISELKRGPD--LPIKGK---SKELNILIKNLLNL--SAKERPS 288
|
Length = 1021 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
L +LH I++ D+ +NVLLD++ +SD G+A L S +AGT G+ AP
Sbjct: 110 LEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAP 166
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E+ D + GV E+I P
Sbjct: 167 ELLQGEEYDFSVDYFALGVTLYEMIAARGP 196
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 2e-05
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 558 KLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ-ICNMESLEELNLSHNN 616
L L+LSNN+ F+ L +L LDLS N L I P+ + SL L+LS NN
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLT-SISPEAFSGLPSLRSLDLSGNN 59
Query: 617 L 617
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 2e-05
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 31 ALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCN 73
ALL +K+SL S LSSW N + PC+W G+ C+
Sbjct: 7 ALLAFKSSLNG--DPSGALSSW-----NPSSSDPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-05
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
IV+ D+ +N+LLD +SD G+A + P GT GY APE+ + + T
Sbjct: 123 IVYRDLKPENILLDDRGHIRISDLGLAVQI-PEGETVRGRVGTVGYMAPEVINNEKYTFS 181
Query: 946 YDVHSFGVLALEVIKGNHP 964
D G L E+I+G P
Sbjct: 182 PDWWGLGCLIYEMIQGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-05
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 27/209 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALTEIRHRNIIK 823
+GKG G V E +G +A+K +++ DE+A LTE R +
Sbjct: 3 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH---------TLTENRVLQNSR 53
Query: 824 FHGFCSNAQHSF-------IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VANAL 875
H F + ++SF V EY + G L L + E R + +AL
Sbjct: 54 -HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE----DRARFYGAEIVSAL 108
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
YLH + +V+ D+ +N++LD + ++DFG+ K + F GT Y APE
Sbjct: 109 DYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 166
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D GV+ E++ G P
Sbjct: 167 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 26/229 (11%)
Query: 804 DEFLNEVLALTEIRHRNIIKFHGF----CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
D NE+ L I NI+K +GF + ++ EY RG L +L + K+
Sbjct: 63 DITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE---KDL 119
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL-NPH 918
+ ++++ L L+ P + +++S + L+ ++ + G+ K L +P
Sbjct: 120 SFKTKLDMAIDCCKGLYNLYKYTNKP--YKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177
Query: 919 SSNWTAFAGTFGYAAPEIAHMM--RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS 976
N Y + ++ + + T K D++S GV+ E+ G P + ++T
Sbjct: 178 FKNVNFMV----YFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEIY 231
Query: 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
++I IN+N +LP D + I + C RP +K++
Sbjct: 232 DLI--INKNNSLKLPL------DCPLEIKCIVEACTSHDSIKRPNIKEI 272
|
Length = 283 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-05
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 43/216 (19%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKK---FNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G V A P+G+ A+KK F Q L E+ L +H NII
Sbjct: 13 IGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRT------LREIKILRRFKHENII 66
Query: 823 KFH------GFCSNAQHSFIVSEYLD----RGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
F S +IV E ++ + T L +D + F + +
Sbjct: 67 GILDIIRPPSFES-FNDVYIVQELMETDLYKLIKTQHLSNDHI-QYF--------LYQIL 116
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTF 929
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T
Sbjct: 117 RGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATR 173
Query: 930 GYAAPEIAHMMRATEKY----DVHSFGVLALEVIKG 961
Y APEI M ++ Y D+ S G + E++
Sbjct: 174 WYRAPEI---MLNSKGYTKAIDIWSVGCILAEMLSN 206
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
L LH + IV+ D+ +N+LLD +SD G+A + P GT GY AP
Sbjct: 115 LEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEI-PEGETIRGRVGTVGYMAP 170
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E+ R T D G L E+I+G P
Sbjct: 171 EVVKNERYTFSPDWWGLGCLIYEMIEGKSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 3e-05
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 102 HLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNH 160
+L L+LS N L IP L L+ LDL N L+ + P+ L LR L N+
Sbjct: 1 NLKSLDLSNNRL-TVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 161 L 161
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 3e-05
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
NL L L N N L + +F+ L +L+ L + NNL EAF P+L LDLS
Sbjct: 1 NLKSLDLSN---NRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSG 57
Query: 447 NNL 449
NNL
Sbjct: 58 NNL 60
|
Length = 60 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 3e-05
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545
L+ LDLS+N + F+ L +L L L+ N L+ P F L L+ LDLS N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 3e-05
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALTEIRHRNIIK 823
+GKG G V E +G +A+K +++ DE+A + E L RH +
Sbjct: 3 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNTRHPFLTA 59
Query: 824 F-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VANALSYLHHD 881
+ F ++ + F++ EY + G L L + E +R + +AL YLH
Sbjct: 60 LKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSALEYLHSR 114
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
+V+ DI +N++LD + ++DFG+ K + F GT Y APE+
Sbjct: 115 ---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 171
Query: 942 ATEKYDVHSFGVLALEVIKGNHP 964
D GV+ E++ G P
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 3e-05
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 27/220 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDE---FLNEVLALT 814
DDF IG+G G V ++ +G ++A+K N EM + E F E L
Sbjct: 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKW----EMLKRAETACFREERDVLV 56
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK--DDAAAKEFGWNQRMNVIKGV- 871
R I H + + ++V +Y G L T+L +D ++ R + + V
Sbjct: 57 NGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMA---RFYLAEMVL 113
Query: 872 -ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-GTF 929
+++ L + VH DI NVLLD ++DFG L + + A GT
Sbjct: 114 AIDSVHQLGY------VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTP 167
Query: 930 GYAAPEIAHMMR-ATEKY----DVHSFGVLALEVIKGNHP 964
Y +PEI M +Y D S GV E++ G P
Sbjct: 168 DYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 3e-05
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLD 899
+ + +L DD + + ++ VA + +L +C VH D++++NVLL
Sbjct: 217 SNDSEVKNLLSDDGS-EGLTTLDLLSFTYQVARGMEFLASKNC----VHRDLAARNVLLA 271
Query: 900 SEHEAHVSDFGIAKFLNPHSSNWTAFAGTF---GYAAPEIAHMMRATEKYDVHSFGVLAL 956
+ DFG+A+ + H SN+ + TF + APE T DV S+G+L
Sbjct: 272 QGKIVKICDFGLARDIM-HDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLW 330
Query: 957 EVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVES 1015
E+ G P + + S+F N I +R+ P + + ++ + C
Sbjct: 331 EIFSLGGTPYPGMIVD-STFYNKIKS-----GYRMAKPDHATQE----VYDIMVKCWNSE 380
Query: 1016 PEARPTMKKVCNLL 1029
PE RP+ + +++
Sbjct: 381 PEKRPSFLHLSDIV 394
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 4e-05
Identities = 79/310 (25%), Positives = 125/310 (40%), Gaps = 85/310 (27%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMAD----QDEFLNEVLALTEIR-HRN 820
+GKG G V+KA + + + A+KK +FD + Q F E++ L E+ H N
Sbjct: 15 LGKGAYGIVWKAIDRRTKEVVALKK-----IFDAFRNATDAQRTF-REIMFLQELGDHPN 68
Query: 821 IIKFHGF--CSNAQHSFIVSEYLDRGSLTT---------ILKDDAAAKEFGWNQRMNVIK 869
I+K N + ++V EY++ T IL+D + ++
Sbjct: 69 IVKLLNVIKAENDKDIYLVFEYME-----TDLHAVIRANILEDV---------HKRYIMY 114
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW-----TA 924
+ AL Y+H ++H D+ N+LL+S+ ++DFG+A+ L+ N T
Sbjct: 115 QLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTD 171
Query: 925 FAGTFGYAAPEI---AHMMRATEKYDVHSFG-VLA-----------------LEVIKGNH 963
+ T Y APEI + R T+ D+ S G +L LE I
Sbjct: 172 YVATRWYRAPEILLGST--RYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVI 229
Query: 964 PR----DYVSTNFSSFSN-MITEINQ----NLDHRLPTPSRDVMDKLMSIMEVAILCLVE 1014
D S S F+ M+ + LD LP S D +D L LV
Sbjct: 230 GPPSAEDIESIK-SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKK-------LLVF 281
Query: 1015 SPEARPTMKK 1024
+P R T ++
Sbjct: 282 NPNKRLTAEE 291
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 46.6 bits (110), Expect = 4e-05
Identities = 63/269 (23%), Positives = 103/269 (38%), Gaps = 46/269 (17%)
Query: 749 FLYEEIIKAIDDFGEKY----CIGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMA 801
F +E+ K + + E+Y +G G GSV Y L + AVKK + F +
Sbjct: 1 FYRQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKV--AVKKLSRP--FQSLI 56
Query: 802 DQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE-YLDRGSLTTILKDDAAAKEFG 860
E+ L ++H N+I + A +E YL + L + ++
Sbjct: 57 HARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQKLS 116
Query: 861 WNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920
+I + L Y+H I+H D+ NV ++ + E + DFG+A+
Sbjct: 117 DEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADD 170
Query: 921 NWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979
T + T Y APEI + M + D+ S G + E++KG
Sbjct: 171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKG------------------ 212
Query: 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVA 1008
+ P D +D+L IMEV
Sbjct: 213 ---------KALFPGNDYIDQLKRIMEVV 232
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 4e-05
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V+ A+ +G I A+K+ LLF ++ + L E LT + ++K
Sbjct: 9 VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF-KLNEVRHVLTERDILTTTKSEWLVKLL 67
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ ++ ++ EY+ G T+L + E + R + + A+ LH
Sbjct: 68 YAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSED--HARFYMAEMFE-AVDALHE---LG 121
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
+H D+ +N L+D+ ++DFG++K + +S G+ Y APE ++R +
Sbjct: 122 YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS----VVGSPDYMAPE---VLRG-K 173
Query: 945 KY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978
Y D S G + E + G P + N ++ N+
Sbjct: 174 GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN-ETWENL 210
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 4e-05
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 761 FGEKYCIGKGRQGSVYKAE------LPS-GIIFAVKKFNSQLLFDEMADQD-------EF 806
F EK +G+G+ G V+ E LP+ F V+K L+ ++ D +F
Sbjct: 9 FKEK--LGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDF 66
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK----DDAAAK----- 857
L EV L+ ++ NII+ G C + +++EY++ G L L DD
Sbjct: 67 LKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAV 126
Query: 858 -------EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910
++ ++V +A+ + YL VH D++++N L+ ++DFG
Sbjct: 127 PPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVHRDLATRNCLVGENLTIKIADFG 183
Query: 911 IAKFLNPHSSNWTAFAG----TFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
+++ N ++ ++ G + A E M + T DV +FGV E++
Sbjct: 184 MSR--NLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 5e-05
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 366 SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425
+L L+L N L+ + + L L ++++ N+L + P++F L SL L + NNL
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 5e-05
Identities = 47/188 (25%), Positives = 95/188 (50%), Gaps = 23/188 (12%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDE-F----LNEVL 811
+D++ + I +G G VY+A + +G I A+KK +M + E F L E+
Sbjct: 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKL-------KMEKEKEGFPITSLREIN 56
Query: 812 ALTEIRHRNIIKFHG--FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
L +++H NI+ SN ++V EY++ L ++++ + F ++ ++
Sbjct: 57 ILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMET--MKQPFLQSEVKCLML 113
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA-KFLNPHSSNWTAFAGT 928
+ + +++LH + I+H D+ + N+LL++ + DFG+A ++ +P +T T
Sbjct: 114 QLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP-LKPYTQLVVT 169
Query: 929 FGYAAPEI 936
Y APE+
Sbjct: 170 LWYRAPEL 177
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 6e-05
Identities = 24/60 (40%), Positives = 29/60 (48%)
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
+L LDLS N+L + L NL +L L N+L P L SL LDLS N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 6e-05
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIF-AVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNI 821
IG+G G V+KA +L +G F A+K+ Q + M + EV L + H N+
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST--IREVAVLRHLETFEHPNV 66
Query: 822 IKFHGFCSNAQHS-----FIVSEYLDRGSLTTILK---DDAAAKEFGWNQRMNVIKGVAN 873
++ C+ ++ +V E++D+ LTT L + E + +++G
Sbjct: 67 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG--- 122
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L +LH +VH D+ +N+L+ S + ++DFG+A+ + + T+ T Y A
Sbjct: 123 -LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-TSVVVTLWYRA 177
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIK 960
PE+ D+ S G + E+ +
Sbjct: 178 PEVLLQSSYATPVDLWSVGCIFAEMFR 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 6e-05
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLN---PHSSNWTAFAGTFGYAAPEIAHMMRA 942
+V+ D+ N+LLD +SD G+A + PH+S GT GY APE+ A
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGTA 172
Query: 943 TEKY-DVHSFGVLALEVIKGNHP-RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000
+ D S G + ++++G+ P R + + + M +N L + +++
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEG 232
Query: 1001 LM 1002
L+
Sbjct: 233 LL 234
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 6e-05
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
IV+ D+ +NVLLD + +SD G+A L T AGT GY APEI +
Sbjct: 116 IVYRDMKPENVLLDDQGNCRLSDLGLAVEL-KDGKTITQRAGTNGYMAPEI--LKEEPYS 172
Query: 946 YDVHSF--GVLALEVIKGNHP-RDY 967
Y V F G E++ G P +D+
Sbjct: 173 YPVDWFAMGCSIYEMVAGRTPFKDH 197
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 6e-05
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 871 VANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT- 928
VA + +L +C +H D++++NVLL A + DFG+A+ + + SN+
Sbjct: 221 VAQGMDFLASKNC----IHRDVAARNVLLTDGRVAKICDFGLARDIM-NDSNYVVKGNAR 275
Query: 929 --FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985
+ APE T + DV S+G+L E+ G P + N S F M+ Q
Sbjct: 276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-SKFYKMVKRGYQM 334
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
P ++ SIM+ +C P RPT ++ L+ +
Sbjct: 335 SRPDFAPP------EIYSIMK---MCWNLEPTERPTFSQISQLIQR 371
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 9e-05
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 809 EVLALTEIRHRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E L I H +II+ G F N I+ Y + L L AA + + +
Sbjct: 133 EAHILRAINHPSIIQLKGTFTYNKFTCLILPRY--KTDLYCYL---AAKRNIAICDILAI 187
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSNWTAFA 926
+ V A+ YLH + I+H DI ++N+ ++ + + DFG A F ++ +++ + +A
Sbjct: 188 ERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWA 244
Query: 927 GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN 962
GT APE+ D+ S G++ E+ +
Sbjct: 245 GTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280
|
Length = 391 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 1e-04
Identities = 67/292 (22%), Positives = 97/292 (33%), Gaps = 71/292 (24%)
Query: 260 FIPSVIGNLKSLFELDLSENQLFGSIPLS-------FSNLSSLTLMSLFNNSLSGSIPPT 312
+ S + SL EL LS N+ G IP + L + L +N+L P
Sbjct: 42 ALASALRPQPSLKELCLSLNET-GRIPRGLQSLLQGLTKGCGLQELDLSDNALG---PDG 97
Query: 313 QGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGL-VPNEIGYLKS----L 367
G LE+L SSL+ L L +NG + LK L
Sbjct: 98 CGVLESLLRS------------------SSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL 139
Query: 368 SKLELCRNHLSGVIPHSIGNL----TKLVLVNMCENHL----FGLIPKSFRNLTSLERLR 419
KL L RN L G ++ L +N+ N + + + + +LE L
Sbjct: 140 EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLD 199
Query: 420 FNQNNL----FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYG 475
N N L + E +L L+L NNL +++
Sbjct: 200 LNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAG---------AAALASAL----- 245
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGK-----IPVQFEKLFSLNKLILNLNQLS 522
+ + L L LS N I V EK SL +L L N+
Sbjct: 246 -----LSPNISLLTLSLSCNDITDDGAKDLAEVLAEKE-SLLELDLRGNKFG 291
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 1e-04
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G +VYK +G I A+K+ + L E + E+ + E++H NI++ H
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEIH---LDAEEGTPSTAIREISLMKELKHENIVRLH 64
Query: 826 GFCSNAQHSFIVSEYLD------------RGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
+V EY+D RG+L D K F + ++KG+A
Sbjct: 65 DVIHTENKLMLVFEYMDKDLKKYMDTHGVRGAL-----DPNTVKSFTYQ----LLKGIA- 114
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
+ H + ++H D+ +N+L++ E ++DFG+A+ + ++ T Y A
Sbjct: 115 ---FCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRA 168
Query: 934 PEIAHMMRA-TEKYDVHSFGVLALEVIKG 961
P++ R + D+ S G + E+I G
Sbjct: 169 PDVLLGSRTYSTSIDIWSVGCIMAEMITG 197
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 1e-04
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 39/186 (20%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEVLALTEIRHRN 820
IG+G G+V+KA + I A+K+ + D DE L E+ L E++H+N
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLLKELKHKN 60
Query: 821 IIKFHGFCSNAQHSFIVSEYLD----------RGSLTTILKDDAAAKEFGWNQRMNVIKG 870
I++ + + + +V EY D G + D K F ++KG
Sbjct: 61 IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDI-----DPEIVKSF----MFQLLKG 111
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
+A S H+ ++H D+ +N+L++ E ++DFG+A+ ++A T
Sbjct: 112 LAFCHS--HN-----VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLW 164
Query: 931 YAAPEI 936
Y P++
Sbjct: 165 YRPPDV 170
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 1e-04
Identities = 59/283 (20%), Positives = 118/283 (41%), Gaps = 39/283 (13%)
Query: 767 IGKGRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G G V +E+ VK+ + E Q+EFL + ++H NI++
Sbjct: 3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKE---QNEFLQQGDPYRILQHPNILQ 59
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK---GVANALSYLH- 879
G C A +V EY + G L + L + +Q + + + +A ++++H
Sbjct: 60 CLGQCVEAIPYLLVFEYCELGDLKSYLSQE--QWHRRNSQLLLLQRMACEIAAGVTHMHK 117
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI--AKFLNPHSSNWTAFAGTFGYAAPEIA 937
H+ +H D++ +N L S+ V D+GI +++ + + APE+
Sbjct: 118 HN----FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELV 173
Query: 938 HMMRA-------TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN--MITEINQNLDH 988
T+ +V + GV E+ + + +S S+ ++ + ++
Sbjct: 174 GEFHGGLITAEQTKPSNVWALGVTLWELF------ENAAQPYSHLSDREVLNHVIKDQQV 227
Query: 989 RLPTPSRDV--MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+L P ++ ++ +++ L SPE R T ++V LL
Sbjct: 228 KLFKPQLELPYSERWYEVLQFCWL----SPEKRATAEEVHRLL 266
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 1e-04
Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 41/283 (14%)
Query: 767 IGKGRQGSVY--------KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G G VY K E + + AVK N + ++ EFLNE +
Sbjct: 14 LGQGSFGMVYEGNARDIIKGEAETRV--AVKTVNESA---SLRERIEFLNEASVMKGFTC 68
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-------V 871
++++ G S Q + +V E + G L + L+ E + ++ +
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
A+ ++YL+ VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 129 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 183
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNL 986
+ APE T D+ SFGV+ E+ P Y + + + L
Sbjct: 184 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFVMD-GGYL 240
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D P R + LM +C +P+ RPT ++ NLL
Sbjct: 241 DQPDNCPER--VTDLMR------MCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-04
Identities = 76/306 (24%), Positives = 121/306 (39%), Gaps = 56/306 (18%)
Query: 759 DDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
D G +Y IG G G V A + SG A+KK FD L E+ L
Sbjct: 1 FDVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPH--AFDVPTLAKRTLRELKIL 58
Query: 814 TEIRHRNIIK----FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM-NVI 868
+H NII ++ + ++V + L L I+ D E + ++
Sbjct: 59 RHFKHDNIIAIRDILRPPGADFKDVYVVMD-LMESDLHHIIHSDQPLTEEHIRYFLYQLL 117
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NP--HSSNWTA 924
+G L Y+H ++H D+ N+L++ + E + DFG+A+ L +P H T
Sbjct: 118 RG----LKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTE 170
Query: 925 FAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNH--P-RDYV-------STNFS 973
+ T Y APE+ + T D+ S G + E++ P ++YV S S
Sbjct: 171 YVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGS 230
Query: 974 SFSNMITEIN--------QNLDHRLPTPSRDVMDK-------LMSIMEVAILCLVESPEA 1018
++ I QNL + P P + K L+S M L PE
Sbjct: 231 PSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQM------LQFDPEE 284
Query: 1019 RPTMKK 1024
R T+++
Sbjct: 285 RITVEQ 290
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 1e-04
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V K + I A+KKF +E+ ++ L E+ L ++ NI++
Sbjct: 9 VGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEV--KETTLRELKMLRTLKQENIVELK 66
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V EY+++ L + + + + I + A+ + H +
Sbjct: 67 EAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP---EKVRSYIYQLIKAIHWCHKN---D 120
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS-SNWTAFAGTFGYAAPEIAHMMRATE 944
IVH DI +N+L+ + DFG A+ L+ S +N+T + T Y +PE+ +
Sbjct: 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGK 180
Query: 945 KYDVHSFGVLALEVIKG 961
D+ S G + E+ G
Sbjct: 181 AVDMWSVGCILGELSDG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 1e-04
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 22/197 (11%)
Query: 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNV 896
Y+D+ + IL++D A + ++ VA +S+L +C +H D++++N+
Sbjct: 192 GSYIDQDVTSEILEEDELALDT--EDLLSFSYQVAKGMSFLASKNC----IHRDLAARNI 245
Query: 897 LLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRATEKYDVHSFGV 953
LL + DFG+A+ + + SN+ + APE T + DV S+G+
Sbjct: 246 LLTHGRITKICDFGLARDIR-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 304
Query: 954 LALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCL 1012
L E+ G+ P + + S F MI E +R+ +P + + IM+ C
Sbjct: 305 LLWEIFSLGSSPYPGMPVD-SKFYKMIKE-----GYRMLSPECAPSE-MYDIMKS---CW 354
Query: 1013 VESPEARPTMKKVCNLL 1029
P RPT K++ L+
Sbjct: 355 DADPLKRPTFKQIVQLI 371
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 1e-04
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSG-IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+DF IG+G G V +L + +FA+K N + + A+ F E L
Sbjct: 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-KRAETACFREERDVLVNGD 59
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK--DDAAAKEFGWNQRMNVIKGVANAL 875
++ I H + + ++V +Y G L T+L +D ++ ++ + +++
Sbjct: 60 NQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAI-DSV 118
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG-IAKFLNPHSSNWTAFAGTFGYAAP 934
LH+ VH DI N+L+D ++DFG K + + + GT Y +P
Sbjct: 119 HQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISP 172
Query: 935 EIAHMM-----RATEKYDVHSFGVLALEVIKGNHP 964
EI M + + D S GV E++ G P
Sbjct: 173 EILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 871 VANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
VAN + +L +C VH D++++NVL+ + DFG+A+ + SN+ + TF
Sbjct: 248 VANGMEFLASKNC----VHRDLAARNVLICEGKLVKICDFGLARDIM-RDSNYISKGSTF 302
Query: 930 ---GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985
+ APE T DV SFG+L E+ G P + N F N I
Sbjct: 303 LPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN-EQFYNAIKR---- 357
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+R+ P+ D++ IM+ C E E RP ++ +L+
Sbjct: 358 -GYRMAKPAH-ASDEIYEIMQ---KCWEEKFEIRPDFSQLVHLV 396
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 12/208 (5%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSGII--FAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+DF +G G G V A + A+K+F + + D +E L I
Sbjct: 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQ-KQVDHVFSERKILNYI 88
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H + +G + + ++V E++ G T L+ + K F + +
Sbjct: 89 NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN---KRFPNDVGCFYAAQIVLIFE 145
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YL IV+ D+ +N+LLD + ++DFG AK ++ + GT Y APEI
Sbjct: 146 YLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT---YTLCGTPEYIAPEI 199
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D + G+ E++ G P
Sbjct: 200 LLNVGHGKAADWWTLGIFIYEILVGCPP 227
|
Length = 340 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 46/253 (18%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-- 823
+G G G V A +G A+KK S+ + + + E+ L + H N+I
Sbjct: 23 VGSGAYGQVCSAFDTKTGRKVAIKKL-SRPFQSAIHAKRTY-RELRLLKHMDHENVIGLL 80
Query: 824 --FHGFCS--NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN------VIKGVAN 873
F S + Q ++V+ + L I+K Q+++ ++ +
Sbjct: 81 DVFTPASSLEDFQDVYLVTHLMGA-DLNNIVK----------CQKLSDDHIQFLVYQILR 129
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L Y+H I+H D+ N+ ++ + E + DFG+A+ + T + T Y A
Sbjct: 130 GLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLARHTD---DEMTGYVATRWYRA 183
Query: 934 PEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
PEI M M + D+ S G + E++ G T F S+ I ++ + ++ +
Sbjct: 184 PEI--MLNWMHYNQTVDIWSVGCIMAELLTGK-------TLFPG-SDHIDQLKRIMN-LV 232
Query: 991 PTPSRDVMDKLMS 1003
TP +++ K+ S
Sbjct: 233 GTPDEELLQKISS 245
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 2e-04
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKF-NSQLLFDEMADQDEFLNEVLALT 814
+I++F I +G G VY + + ++AVK + ++ M Q + + LAL+
Sbjct: 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS 61
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGW-NQRMNV--IKGV 871
+ I+ + +A + ++V EYL G + ++L +G+ ++ M V I V
Sbjct: 62 --KSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLH------IYGYFDEEMAVKYISEV 113
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913
A AL YLH I+H D+ N+L+ +E ++DFG++K
Sbjct: 114 ALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 18/129 (13%)
Query: 534 ELQYLDLSANKLSS------SIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIH---LS 584
L+ L LS N+ S+ + + L L+LS+N E L+ L
Sbjct: 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQ 111
Query: 585 ELDLSHNFLQGEIPPQIC-----NMESLEELNLSHNNLFDL----IPGCFEEMRSLSRID 635
EL L++N L + +LE+L L N L + R L ++
Sbjct: 112 ELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELN 171
Query: 636 IAYNELQGP 644
+A N +
Sbjct: 172 LANNGIGDA 180
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 3e-04
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSG-IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF IG+G G V ++ I+A+K N + + A+ F E L
Sbjct: 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML-KRAETACFREERNVLVNGD 59
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK--DDAAAKEFGWNQRMNVIKGVANAL 875
+ I H + + ++V +Y G L T+L +D ++ ++ + +++
Sbjct: 60 CQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAI-HSI 118
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-GTFGYAAP 934
LH+ VH DI NVLLD ++DFG +N + ++ A GT Y +P
Sbjct: 119 HQLHY------VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISP 172
Query: 935 EIAHMMR-ATEKY----DVHSFGVLALEVIKGNHP 964
EI M KY D S GV E++ G P
Sbjct: 173 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 4e-04
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 510 SLNKLILNLNQLSGGVPLE-FGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQ 568
+L L L+ N+L+ +P F L L+ LDLS N L+S P++ L L L+LS N
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 569 F 569
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 4e-04
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 767 IGKGRQGSVYK--AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G+G +VYK ++L ++ A+K+ L E + EV L +++H NI+
Sbjct: 14 LGEGTYATVYKGRSKLTDNLV-ALKEIR---LEHEEGAPCTAIREVSLLKDLKHANIVTL 69
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
H + +V EYLD+ L L DD N ++ + + + L+Y H
Sbjct: 70 HDIIHTEKSLTLVFEYLDK-DLKQYL-DDCGNSINMHNVKLFLFQ-LLRGLNYCHRR--- 123
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
++H D+ +N+L++ E ++DFG+A+ + + ++ T Y P+I ++ +T+
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDI--LLGSTD 181
Query: 945 ---KYDVHSFGVLALEVIKG 961
+ D+ G + E+ G
Sbjct: 182 YSTQIDMWGVGCIFYEMSTG 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 4e-04
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 38/247 (15%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 81 LLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 131
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 190
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN--HP-RDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
M E D+ S G + E+++ P RDY+ N + E +L TP
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-----WNKVIE-------QLGTPC 238
Query: 995 RDVMDKL 1001
+ M KL
Sbjct: 239 PEFMKKL 245
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 5e-04
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 13/174 (7%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G VYK +G I A+KK +L +E + E+ L E++H NI+
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKI--RLESEEEGVPSTAIREISLLKELQHPNIVCLQ 65
Query: 826 GFCSNAQHSFIVSEYLD---RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+++ E+L + L ++ K E + + + + + H
Sbjct: 66 DVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAEL----VKSYLYQILQGILFCHSR- 120
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
++H D+ +N+L+D++ ++DFG+A+ +T T Y APE+
Sbjct: 121 --RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEV 172
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 5e-04
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 38/247 (15%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN--HP-RDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
M E D+ S G + E+IKG P D++ N + E +L TP
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-----WNKVIE-------QLGTPC 245
Query: 995 RDVMDKL 1001
+ M KL
Sbjct: 246 PEFMKKL 252
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 6e-04
Identities = 23/60 (38%), Positives = 27/60 (45%)
Query: 246 NLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSL 305
NL L L N L L +L LDLS N L P +FS L SL + L N+L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 6e-04
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 33/171 (19%)
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGY 931
AL +H + +H D+ S N+ L + DFG +K + S ++F GT Y
Sbjct: 181 ALDEVHSRKM---MHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYY 237
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH--- 988
APE+ R ++K D+ S GV+ E++ + P F S EI Q + +
Sbjct: 238 LAPELWERKRYSKKADMWSLGVILYELLTLHRP-------FKGPSQ--REIMQQVLYGKY 288
Query: 989 -RLPTPSRDVMDKLMSIMEVAILCLVESPEARPT---------MKKVCNLL 1029
P P M L+ + L ++P RPT +K V NL
Sbjct: 289 DPFPCPVSSGMKALLDPL------LSKNPALRPTTQQLLHTEFLKYVANLF 333
|
Length = 478 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 7e-04
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 767 IGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G VY A P A+KK L + + + FL E ++ H I+ +
Sbjct: 10 IGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLL-KKRFLREAKIAADLIHPGIVPVY 68
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKD----DAAAKEFGWNQR----MNVIKGVANALSY 877
CS+ + Y++ +L ++LK ++ +KE +++ + + Y
Sbjct: 69 SICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEY 128
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL---------------NPHSSNW 922
+H ++H D+ N+LL E + D+G A F N S+
Sbjct: 129 VHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSM 185
Query: 923 T---AFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
T GT Y APE + A+E D+++ GV+
Sbjct: 186 TIPGKIVGTPDYMAPERLLGVPASESTDIYALGVI 220
|
Length = 932 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 8e-04
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKF---NSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G V+KA + I A+KK N + F A L E+ L ++H N++
Sbjct: 20 IGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITA-----LREIKILQLLKHENVV 74
Query: 823 KFHGFCSNAQHS--------FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
C ++V E+ + L +L + +F ++ V+K + N
Sbjct: 75 NLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNG 131
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL----NPHSSNWTAFAGTFG 930
L Y+H + I+H D+ + N+L+ + ++DFG+A+ N + +T T
Sbjct: 132 LYYIHRN---KILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLW 188
Query: 931 YAAPEI 936
Y PE+
Sbjct: 189 YRPPEL 194
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 8e-04
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
AL LH +++ D+ +N+LLD + + DFG+ K F GT Y A
Sbjct: 105 ALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLA 161
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ T+ D + GVL E++ G P
Sbjct: 162 PELLLGHGYTKAVDWWTLGVLLYEMLTGLPP 192
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 9e-04
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALTEIRHRNIIK 823
+GKG G V E +G +A+K +++ DE+A L E L RH +
Sbjct: 3 LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHT---LTESRVLQNTRHPFLTA 59
Query: 824 F-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VANALSYLHHD 881
+ F ++ + F V EY + G L L + E R + +AL YLH
Sbjct: 60 LKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE----DRARFYGAEIVSALGYLHSC 114
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
+V+ D+ +N++LD + ++DFG+ K + F GT Y APE+
Sbjct: 115 ---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 171
Query: 942 ATEKYDVHSFGVLALEVIKGNHP 964
D GV+ E++ G P
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 0.001
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 198 NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257
NL L L+NN L L +L +LDLS N L P + + L +L L L N+L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 0.001
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
+ EV L +++H NI+ H + +V EYLD+ L + DD N ++
Sbjct: 52 IREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYM-DDCGNIMSMHNVKIF 109
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
+ + + L+Y H ++H D+ +N+L++ E ++DFG+A+ + + ++
Sbjct: 110 LYQ-ILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEV 165
Query: 927 GTFGYAAPEI 936
T Y P++
Sbjct: 166 VTLWYRPPDV 175
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH--S 919
Q + + + + AL+YLH I+H D+ ++N+ LD A + DFG A L+ H +
Sbjct: 185 EQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT 241
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
++GT +PE+ + K D+ S G++ E+ N
Sbjct: 242 PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT 286
|
Length = 392 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 759 DDFGEKYCIGKGRQGSVY----KAELPSGIIFAVKKFNSQLLFDEMADQDEFLN-EVLAL 813
+DF I G G+VY K FA+KK N Q L Q F+ ++L
Sbjct: 1 EDFETIKLISNGAYGAVYLVRHKETRQR---FAMKKINKQNLILRNQIQQVFVERDILTF 57
Query: 814 TEIRHRNIIKFHGFCS--NAQHSFIVSEYLDRGSLTTILKD------DAAAKEFGWNQRM 865
E N FCS +H +V EY++ G T+LK+ D A RM
Sbjct: 58 AE----NPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMA--------RM 105
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913
+ V AL YLH+ IVH D+ N+L+ S ++DFG++K
Sbjct: 106 YFAETVL-ALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSK 149
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 0.001
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G +VYK + +G + A+K Q +E + E L ++H NI+ H
Sbjct: 13 LGEGSYATVYKGKSKVNGKLVALKVIRLQ---EEEGTPFTAIREASLLKGLKHANIVLLH 69
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +V EY+ + K N ++ + + + LSY+H
Sbjct: 70 DIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPE--NVKLFLFQ-LLRGLSYIHQRY--- 123
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
I+H D+ +N+L+ E ++DFG+A+ + S ++ T Y P++ ++ +TE
Sbjct: 124 ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDV--LLGSTEY 181
Query: 946 ---YDVHSFGVLALEVIKG 961
D+ G + +E+I+G
Sbjct: 182 STCLDMWGVGCIFVEMIQG 200
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.002
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 39/229 (17%)
Query: 758 IDDFGEKYCIGK----GRQGSVYKAELPSG------IIFAVKKFNSQ------LLFDEMA 801
ID G+++ I K G G VY+ + S + ++ ++ L+++ +
Sbjct: 7 IDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIY 66
Query: 802 DQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY--LDRGSLTTILKDDAAAKEF 859
D D+ + + I H I K++G C + + + + L++ T + +
Sbjct: 67 DIDK-IALWKNIHNIDHLGIPKYYG-CGSFKRCRMYYRFILLEKLVENT---KEIFKRIK 121
Query: 860 GWNQRM--NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
N+++ N++K + L Y+H I HGDI +N+++D + ++ D+GIA
Sbjct: 122 CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYGIASHFII 178
Query: 918 H---------SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALE 957
H + GT YA + + T + D+ S G L+
Sbjct: 179 HGKHIEYSKEQKDLH--RGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225
|
Length = 294 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.002
Identities = 66/304 (21%), Positives = 127/304 (41%), Gaps = 53/304 (17%)
Query: 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKF------NSQLL-----FDEMADQD---EF 806
F EK +G+G+ G V+ E F K F N +L E A+++ +F
Sbjct: 9 FKEK--LGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDF 66
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK--------DDAAAKE 858
L E+ ++ ++ NII+ C + +++EY++ G L L + A
Sbjct: 67 LKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVT 126
Query: 859 FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918
++ + + +A+ + YL VH D++++N L+ + ++DFG+++ N +
Sbjct: 127 ISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNCLVGKNYTIKIADFGMSR--NLY 181
Query: 919 SSNWTAFAG----TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDY------- 967
S ++ G + + E + + T DV +FGV E++ + Y
Sbjct: 182 SGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
V N F +Q LP P+ D + KLM + C + + RP+ +++
Sbjct: 242 VIENTGEFFR-----DQGRQVYLPKPALCPDSLYKLM------LSCWRRNAKERPSFQEI 290
Query: 1026 CNLL 1029
L
Sbjct: 291 HATL 294
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.002
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 17/148 (11%)
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
+H D++++N+LL + + DFG+A+ + +P + + APE T
Sbjct: 196 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTT 255
Query: 945 KYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
+ DV SFGVL E+ G P V +IN+ RL +R + +
Sbjct: 256 QSDVWSFGVLLWEIFSLGASPYPGV------------QINEEFCQRLKDGTRMRAPENAT 303
Query: 1004 --IMEVAILCLVESPEARPTMKKVCNLL 1029
I + + C P+ RPT + +L
Sbjct: 304 PEIYRIMLACWQGDPKERPTFSALVEIL 331
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 36/246 (14%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-F 824
IG G QG V A + +G A+KK + F + E++ + + H+NII
Sbjct: 24 IGSGAQGIVCAAYDTVTGQNVAIKKLSRP--FQNVTHAKRAYRELVLMKLVNHKNIIGLL 81
Query: 825 HGFCSNA-----QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN-VIKGVANALSYL 878
+ F Q ++V E +D +L +++ D ++RM+ ++ + + +L
Sbjct: 82 NVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLD------HERMSYLLYQMLCGIKHL 134
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH 938
H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 135 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 190
Query: 939 MMRATEKYDVHSFGVLALEVIKGN--HP-RDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
M E D+ S G + E+I+G P D++ N I E +L TPS
Sbjct: 191 GMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ-----WNKIIE-------QLGTPSD 238
Query: 996 DVMDKL 1001
+ M +L
Sbjct: 239 EFMSRL 244
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 23/156 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII--KF 824
+ G VY + +K S+ + EV L + + + K
Sbjct: 6 LKGGLTNRVYLLGTKDED-YVLKINPSRE------KGADREREVAILQLLARKGLPVPKV 58
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ S+++ E+++ G T+ + KE ++ + +A L+ LH LP
Sbjct: 59 LASGESDGWSYLLMEWIE-G--ETLDEVSEEEKE-------DIAEQLAELLAKLHQ--LP 106
Query: 885 PIV--HGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918
+V HGD+ N+L+D + D+ A + P
Sbjct: 107 LLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPA 142
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
+ EV L ++H NI+ H + +V EYLD L L D+ N ++
Sbjct: 51 IREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQYL-DNCGNLMSMHNVKIF 108
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
+ + + LSY H I+H D+ +N+L++ + E ++DFG+A+ + + ++
Sbjct: 109 MFQ-LLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEV 164
Query: 927 GTFGYAAPEIAHMMRATE---KYDVHSFGVLALEVIKG 961
T Y P++ ++ +TE D+ G + E+ G
Sbjct: 165 VTLWYRPPDV--LLGSTEYSTPIDMWGVGCILYEMATG 200
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.004
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
+H D++++N+LL + + DFG+A+ + +P + APE T
Sbjct: 195 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTT 254
Query: 945 KYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH--RLPTPSRDVMDKL 1001
+ DV SFGVL E+ G P V + E + L R+ P ++
Sbjct: 255 QSDVWSFGVLLWEIFSLGASPYPGV--------QIDEEFCRRLKEGTRMRAPEY-ATPEI 305
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
SIM + C +PE RPT ++ +L
Sbjct: 306 YSIM---LDCWHNNPEDRPTFSELVEIL 330
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.004
Identities = 65/299 (21%), Positives = 108/299 (36%), Gaps = 77/299 (25%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI----RHRNI 821
+GKG G V+ L +G +FA+K +L + + + VL EI H +
Sbjct: 9 LGKGDVGRVFLVRLKGTGKLFALK-----VLDKKEMIKRNKVKRVLTEQEILATLDHPFL 63
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG---------VA 872
+ + +V +Y G L +L+ Q + V
Sbjct: 64 PTLYASFQTETYLCLVMDYCPGGELFRLLQ----------RQPGKCLSEEVARFYAAEVL 113
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLN-------PHSSNWT 923
AL YLH L IV+ D+ +N+LL H+ SDF ++K + +
Sbjct: 114 LALEYLH---LLGIVYRDLKPENILL--HESGHIMLSDFDLSKQSDVEPPPVSKALRKGS 168
Query: 924 A----------------------FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG 961
F GT Y APE+ D + G+L E++ G
Sbjct: 169 RRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228
Query: 962 NHPRDYVSTNFSSFSNMIT-EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR 1019
P + + +FSN++ E+ + + +RD++ KL LV+ P R
Sbjct: 229 TTPFKGSNRD-ETFSNILKKEVTFPGSPPVSSSARDLIRKL----------LVKDPSKR 276
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.004
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG---WNQ 863
+ E L ++H NI+ H + V EY+ T L G +N
Sbjct: 51 IREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-----TDLAQYMIQHPGGLHPYNV 105
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923
R+ + + + L+Y+H I+H D+ +N+L+ E ++DFG+A+ + S ++
Sbjct: 106 RLFMFQ-LLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS 161
Query: 924 AFAGTFGYAAPEIAHMMRATE---KYDVHSFGVLALEVIKG 961
+ T Y P++ ++ AT+ D+ G + +E+++G
Sbjct: 162 SEVVTLWYRPPDV--LLGATDYSSALDIWGAGCIFIEMLQG 200
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1031 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.98 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.98 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.98 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.98 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.98 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.98 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.98 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.98 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.98 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.98 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.98 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.97 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.97 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.96 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.96 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.95 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.94 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.94 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.94 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.93 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.93 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.93 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.92 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.92 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.9 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.9 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.9 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.9 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.87 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.86 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.86 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.85 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.83 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.82 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.82 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.81 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.8 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.8 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.8 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.79 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.79 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.78 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.77 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.77 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.76 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.76 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.76 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.72 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.71 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.71 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.68 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.67 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.65 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.65 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.64 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.63 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.6 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.55 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.54 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.53 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.53 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.52 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.51 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.49 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.49 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.43 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.35 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.35 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.28 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.25 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.23 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.22 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.21 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.17 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 99.14 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.13 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.11 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.11 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.11 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.09 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.09 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.05 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 99.04 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.03 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.02 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.01 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.99 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.99 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.95 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.92 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.89 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.86 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.81 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.77 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.74 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.72 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.64 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.62 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.6 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.53 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.52 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.5 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.47 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.44 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.38 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-117 Score=1136.57 Aligned_cols=911 Identities=33% Similarity=0.559 Sum_probs=697.0
Q ss_pred ChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCccc
Q 043316 25 STKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLM 104 (1031)
Q Consensus 25 ~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~ 104 (1031)
.++|+.||++||+++. +| .+.+.+|+ .++|||.|.||+|+..++|+.|+|++++++|.+++. |..+++|+
T Consensus 27 ~~~~~~~l~~~~~~~~--~~-~~~~~~w~------~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~-~~~l~~L~ 96 (968)
T PLN00113 27 HAEELELLLSFKSSIN--DP-LKYLSNWN------SSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSA-IFRLPYIQ 96 (968)
T ss_pred CHHHHHHHHHHHHhCC--CC-cccCCCCC------CCCCCCcCcceecCCCCcEEEEEecCCCccccCChH-HhCCCCCC
Confidence 6789999999999996 44 46689997 567999999999987789999999999999988654 89999999
Q ss_pred EEecCCCcCcCCCccccc-cCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc
Q 043316 105 YLNLSCNVLYGNIPPQIS-NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1031)
+|+|++|+++|.+|..+. .+++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|
T Consensus 97 ~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n 174 (968)
T PLN00113 97 TINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGN 174 (968)
T ss_pred EEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccC
Confidence 999999999999998876 899999999999999988885 56889999999999999889999999999999999999
Q ss_pred ccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCc
Q 043316 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPS 263 (1031)
Q Consensus 184 ~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 263 (1031)
.+++.+|..++++++|++|+|++|++++.+|..++++++|++|+|++|++++.+|..++++++|++|++++|.+++.+|.
T Consensus 175 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 254 (968)
T PLN00113 175 VLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPS 254 (968)
T ss_pred cccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccCh
Confidence 99889999999999999999999999888898899999999999999999888888888888999999998888888888
Q ss_pred cccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccC
Q 043316 264 VIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSL 343 (1031)
Q Consensus 264 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 343 (1031)
.++++++|++|+|++|++++.+|..+.++++|+.|++++|.+++.+|..+.++++|+.|++++|.+.+.+|..++.+++|
T Consensus 255 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 334 (968)
T PLN00113 255 SLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRL 334 (968)
T ss_pred hHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCC
Confidence 88888888888888888888888888888888888888888888778777777777777777777777777777777777
Q ss_pred ceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecccc
Q 043316 344 RTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423 (1031)
Q Consensus 344 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 423 (1031)
+.|++++|.+++.+|..++.+++|+.|++++|++++.+|..+..+++|+.|++++|++.+..|..+..+++|+.|++++|
T Consensus 335 ~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n 414 (968)
T PLN00113 335 QVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414 (968)
T ss_pred CEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCC
Confidence 77777777777777777777777777777777777666666666666666666666666655555555554444444444
Q ss_pred ccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChh
Q 043316 424 NLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV 503 (1031)
Q Consensus 424 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 503 (1031)
++.+ .+|..+..+++|+.|++++|.+++.+|.
T Consensus 415 ~l~~------------------------------------------------~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 446 (968)
T PLN00113 415 SFSG------------------------------------------------ELPSEFTKLPLVYFLDISNNNLQGRINS 446 (968)
T ss_pred Eeee------------------------------------------------ECChhHhcCCCCCEEECcCCcccCccCh
Confidence 4333 3344444555555555555555555555
Q ss_pred hhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhcccccc
Q 043316 504 QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHL 583 (1031)
Q Consensus 504 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 583 (1031)
.+..+++|+.|++++|++.+.+|..+ ..++|+.|++++|++++..|..+.++++|++|+|++|++++.+|..+..+++|
T Consensus 447 ~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 525 (968)
T PLN00113 447 RKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKL 525 (968)
T ss_pred hhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCC
Confidence 55556666666666666665556544 34778888888888888888888888888888999998888888888889999
Q ss_pred CceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCCCCCCc---ccccccCCC
Q 043316 584 SELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAF---KDGLMEGNK 660 (1031)
Q Consensus 584 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~---~~~~~~~n~ 660 (1031)
+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.+++++|+++|.+|...+| ....+.||+
T Consensus 526 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 605 (968)
T PLN00113 526 VSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNI 605 (968)
T ss_pred CEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCc
Confidence 99999999999889999999999999999999999888999999999999999999999999987654 456789999
Q ss_pred CccCCC--CCCCCCCccCCcccccccceEEeehhHHHHHHHHHHHHHHHhhhccccchhhhccccccCCCCCCCCCCCCC
Q 043316 661 GLCGNF--KALPSCDAFMSHEQTSRKKWVVIVFPILGMVVLLIGLFGFFLFFGQRKRDSQEKRRTFFGPKATDDFGDPFG 738 (1031)
Q Consensus 661 ~~c~~~--~~~~~c~~~~~~~~~~~~~~~~ii~~i~g~~vll~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (1031)
.+|+.. ...++|... .....+.+++++++++++++++++++++++++|++... ++.. ......+.. .
T Consensus 606 ~lc~~~~~~~~~~c~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~---~ 674 (968)
T PLN00113 606 DLCGGDTTSGLPPCKRV-----RKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLEL-KRVE--NEDGTWELQ---F 674 (968)
T ss_pred cccCCccccCCCCCccc-----cccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccc-cccc--ccccccccc---c
Confidence 999853 234566421 11223444555555544444444433333333222111 1100 000000000 0
Q ss_pred cccccccCccccHHHHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC
Q 043316 739 FSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817 (1031)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~ 817 (1031)
... .....+.+++ ....|...+.||+|+||.||+|.. .+++.||||+++.... ...+|++++++++
T Consensus 675 ~~~--~~~~~~~~~~---~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~l~~l~ 741 (968)
T PLN00113 675 FDS--KVSKSITIND---ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--------IPSSEIADMGKLQ 741 (968)
T ss_pred ccc--ccchhhhHHH---HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--------ccHHHHHHHhhCC
Confidence 000 0011223333 345678888999999999999965 5799999999864321 1124688899999
Q ss_pred CCceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCee
Q 043316 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897 (1031)
Q Consensus 818 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 897 (1031)
|||||+++|+|.+++..++||||+++|+|.++++. ++|.++.+++.|+|+|++|||..+.++|+||||||+||+
T Consensus 742 HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil 815 (968)
T PLN00113 742 HPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKII 815 (968)
T ss_pred CCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEE
Confidence 99999999999999999999999999999999953 788999999999999999999766669999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhh
Q 043316 898 LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 898 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~ 977 (1031)
++.++.+++. ||.+...... ....+++.|+|||++.+..++.++|||||||++|||+||+.||+...........
T Consensus 816 ~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~ 890 (968)
T PLN00113 816 IDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVE 890 (968)
T ss_pred ECCCCceEEE-eccccccccC----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHH
Confidence 9999988876 6655433211 2336789999999999999999999999999999999999998543222111111
Q ss_pred hHH------HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 978 MIT------EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 978 ~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
... ......++..........+...++.+++.+||+.||++||||+||++.|++
T Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~ 950 (968)
T PLN00113 891 WARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLES 950 (968)
T ss_pred HHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHH
Confidence 111 111222333322222334556678899999999999999999999999874
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-62 Score=631.42 Aligned_cols=499 Identities=38% Similarity=0.581 Sum_probs=425.3
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCcccc-ccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIG-HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
..+++.|+|++|.++|.+|+.+..+++|++|+|++|+++|.+|..+. .+++|++|+|++|+++|.+|. +.+++|++|
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L 145 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETL 145 (968)
T ss_pred CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEE
Confidence 35789999999999999999999999999999999999999998866 899999999999999998886 568899999
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
+|++|.+++.+|..++++++|++|+|++|.+++.+|..++++++|++|+|++|++++.+|..++++++|+.|+|++|.++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999999999999999999999999999999899999999999999999999999888999999999999999999998
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 338 (1031)
+.+|..++++++|++|+|++|++++.+|..|+++++|+.|++++|++++.+|..+.++++|++|++++|.+.+.+|..+.
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~ 305 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVI 305 (968)
T ss_pred CcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHc
Confidence 88888888888888888888888888888888888888888888888877777777777777777777777766666666
Q ss_pred ccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccce
Q 043316 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418 (1031)
Q Consensus 339 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 418 (1031)
++++|++|++++|.+++.+|..++.+++|+.|++++|.+++.+|..++.+++|+.|++++|++.+..|..
T Consensus 306 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~---------- 375 (968)
T PLN00113 306 QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG---------- 375 (968)
T ss_pred CCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChh----------
Confidence 6666777776666666666666666666666666666666655655555555555555555554444443
Q ss_pred eccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCccc
Q 043316 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIV 498 (1031)
Q Consensus 419 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 498 (1031)
+..+++|+.|++++|+ +.+.+|..+..+++|+.|++++|+++
T Consensus 376 --------------~~~~~~L~~L~l~~n~------------------------l~~~~p~~~~~~~~L~~L~L~~n~l~ 417 (968)
T PLN00113 376 --------------LCSSGNLFKLILFSNS------------------------LEGEIPKSLGACRSLRRVRLQDNSFS 417 (968)
T ss_pred --------------HhCcCCCCEEECcCCE------------------------ecccCCHHHhCCCCCCEEECcCCEee
Confidence 3344455555555543 34566777888899999999999999
Q ss_pred CCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhc
Q 043316 499 GKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578 (1031)
Q Consensus 499 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 578 (1031)
+..|..|..+++|+.|++++|++++.+|..+..+++|++|+|++|++.+.+|..+ ..++|++|+|++|++++..|..|.
T Consensus 418 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~ 496 (968)
T PLN00113 418 GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLG 496 (968)
T ss_pred eECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhh
Confidence 9999999999999999999999999999999999999999999999998888766 458999999999999999999999
Q ss_pred cccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCCCCC
Q 043316 579 KLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNST 649 (1031)
Q Consensus 579 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~ 649 (1031)
.+++|+.|+|++|++.+.+|..+..+++|++|+|++|.+++.+|..|..+++|+.|++++|++++.+|...
T Consensus 497 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 567 (968)
T PLN00113 497 SLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNL 567 (968)
T ss_pred hhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998653
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-46 Score=415.84 Aligned_cols=281 Identities=37% Similarity=0.631 Sum_probs=234.9
Q ss_pred cCccccHHHHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeee
Q 043316 745 FNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824 (1031)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l 824 (1031)
....|.|.++..|+++|...+.||+|+||.||+|...+++.||||++...... . ..+|.+|+.++.+++|||+|++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~---~-~~eF~~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ---G-EREFLNEVEILSRLRHPNLVKL 136 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc---c-hhHHHHHHHHHhcCCCcCcccE
Confidence 34568999999999999999999999999999999999999999988664321 1 4559999999999999999999
Q ss_pred eeeEecCC-eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc
Q 043316 825 HGFCSNAQ-HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 825 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
+|||.+.+ ..++|||||++|+|++++...... .++|.++++||.++|+||+|||+.+.+.||||||||+|||+|++++
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 99999998 599999999999999999886543 7899999999999999999999999889999999999999999999
Q ss_pred eEEeccccccccCCCCCCceee-ccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc----chhhhhh
Q 043316 904 AHVSDFGIAKFLNPHSSNWTAF-AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN----FSSFSNM 978 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~----~~~~~~~ 978 (1031)
+||+|||+|+............ .||.+|+|||++..+..+.|+|||||||++.|++||+.|.+..... ...|...
T Consensus 216 aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 216 AKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred EEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 9999999997553312222222 8999999999999999999999999999999999999887754311 1222211
Q ss_pred H---HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 979 I---TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 979 ~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. ....+.+|+++........+.+.++..++.+|++.+|++||+|.||+++|+
T Consensus 296 ~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 1 145566777765322221256778999999999999999999999999885
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-51 Score=420.00 Aligned_cols=491 Identities=31% Similarity=0.452 Sum_probs=375.2
Q ss_pred CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
..|+.|++++|.++ .+-+.+.+|..|.+|++.+|+++ .+|++||.+.+++.|+.++|+++ .+|+.++.+.+|+.|++
T Consensus 45 v~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 45 VDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDC 121 (565)
T ss_pred cchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhc
Confidence 45777888888877 55666777888888888888887 78888888888888888888887 78888888888888888
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccccc
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
+.|.+. .+|+.++.+-.|+.|+..+|+++ ..|+.+.++.+|..|++.+|++....|..+. ++.|++||+-+|.++ .
T Consensus 122 s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 122 SSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-T 197 (565)
T ss_pred ccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-c
Confidence 888887 67777888888888888888888 7888888888888888888888876665555 888999999888886 7
Q ss_pred CCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccc-ccccCceEEcccCCCcCccCCccCc
Q 043316 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG-NLSSLRTLYLYDNGFYGLVPNEIGY 363 (1031)
Q Consensus 285 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~ 363 (1031)
+|..++.+.+|+.|+|.+|++. ..| .|.+++.|++|+++.|++. .+|...+ +++++.+|||.+|+++ ..|+++.-
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred CChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 8888999999999999999987 566 8899999999999999998 6777665 8999999999999997 56999999
Q ss_pred ccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcc--ccceec--cccccccccccccCCCCCC
Q 043316 364 LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTS--LERLRF--NQNNLFGKVYEAFGDHPNL 439 (1031)
Q Consensus 364 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~--L~~L~L--~~N~l~~~~~~~~~~l~~L 439 (1031)
+++|++||+++|.|+ ..|.+++++ +|+.|-+.+|.+..+-.+.+.+-++ |++|.= ..-.+.....+. -
T Consensus 274 LrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~------e 345 (565)
T KOG0472|consen 274 LRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGT------E 345 (565)
T ss_pred hhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccc------c
Confidence 999999999999998 457789999 9999999999987654444433222 333321 000110000000 0
Q ss_pred CeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCC---CcEEEeeCCcccCCChhhhhccccCcee-e
Q 043316 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK---LQVLDLSSNHIVGKIPVQFEKLFSLNKL-I 515 (1031)
Q Consensus 440 ~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~ 515 (1031)
..-++. .........+...+.|+++.-+++ .+|++.+...+ .+..+++.|++. .+|..+..++.+.+. .
T Consensus 346 ~~~t~~-----~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~ 418 (565)
T KOG0472|consen 346 TAMTLP-----SESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLV 418 (565)
T ss_pred ccCCCC-----CCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHH
Confidence 000000 001111123334555555555554 45655554444 788899999997 688888877766554 4
Q ss_pred cccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCC
Q 043316 516 LNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQG 595 (1031)
Q Consensus 516 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 595 (1031)
+++|.++ .+|..++.+++|..|+|++|-+. .+|..+..+..|+.|++|+|+|. .+|+....+..|+.+-.++|++..
T Consensus 419 lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~ 495 (565)
T KOG0472|consen 419 LSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGS 495 (565)
T ss_pred hhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccc
Confidence 5555555 88888899999999999999887 68888999999999999999986 688888888888888888899986
Q ss_pred cCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCC
Q 043316 596 EIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPI 645 (1031)
Q Consensus 596 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 645 (1031)
..|..+.+|.+|.+|||.+|.|..+ |..+++|.+|++|+++||+|.-+.
T Consensus 496 vd~~~l~nm~nL~tLDL~nNdlq~I-Pp~LgnmtnL~hLeL~gNpfr~Pr 544 (565)
T KOG0472|consen 496 VDPSGLKNMRNLTTLDLQNNDLQQI-PPILGNMTNLRHLELDGNPFRQPR 544 (565)
T ss_pred cChHHhhhhhhcceeccCCCchhhC-ChhhccccceeEEEecCCccCCCH
Confidence 6676799999999999999999765 778899999999999999998443
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-46 Score=388.52 Aligned_cols=253 Identities=28% Similarity=0.417 Sum_probs=217.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-eeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ-HSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~-~~~l 836 (1031)
++++....||+|+.|+||++.+ .+++.+|+|.+.... +....+++.+|++++++.+||+||++||+|..++ ..++
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~---~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI 155 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI---DPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI 155 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC---CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence 3455677899999999999955 579999999994432 3456788999999999999999999999999998 4999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||++|+|+++++.. +++++....+|+.+|++||.|||+ + +||||||||+|||++..|+|||||||.+..+
T Consensus 156 ~mEYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGIL 229 (364)
T ss_pred ehhhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHh
Confidence 99999999999999876 458899999999999999999997 5 9999999999999999999999999999877
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ...+++||..|||||.+.+..|+.++||||||+.++|+.+|+.||.........+......+....+++.+..
T Consensus 230 vnS--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~-- 305 (364)
T KOG0581|consen 230 VNS--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG-- 305 (364)
T ss_pred hhh--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc--
Confidence 533 4467899999999999999999999999999999999999999987664444555555555555555555543
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++.+++..|+++||.+||+++|+++
T Consensus 306 ---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 306 ---EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ---cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 34457888999999999999999999875
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=395.41 Aligned_cols=255 Identities=27% Similarity=0.474 Sum_probs=209.8
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-eeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ-HSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 838 (1031)
++...+.+|+|+||+||+|.+.....||||++......... .++|.+|+.++.+++|||||+++|+|.+.. ..++||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~--~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES--RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH--HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 34455669999999999999954455999999876543322 779999999999999999999999999887 799999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC-eeeCCCCCCCeeeCCCC-ceEEeccccccccC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP-IVHGDISSKNVLLDSEH-EAHVSDFGIAKFLN 916 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~ 916 (1031)
||+++|+|.+++... ....+++..+.+++.|||+||+|||++ + ||||||||+|||++.++ ++||+|||+++...
T Consensus 120 Ey~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKV 195 (362)
T ss_pred EeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeec
Confidence 999999999999874 235699999999999999999999999 7 99999999999999997 99999999998765
Q ss_pred CCCCCceeeccccCcccccccc--ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAH--MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
......+...||+.|||||++. ...|+.|+||||||+++|||+||+.||...... ......+ .....+.++..
T Consensus 196 ~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~v~---~~~~Rp~~p~~- 270 (362)
T KOG0192|consen 196 ISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASAVV---VGGLRPPIPKE- 270 (362)
T ss_pred cccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHHHH---hcCCCCCCCcc-
Confidence 4334455578999999999999 568999999999999999999999998866651 1111111 12222222221
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+..++.+||+.||++||++.|++..|+
T Consensus 271 -----~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 271 -----CPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred -----CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 2336677888899999999999999999886
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-44 Score=394.03 Aligned_cols=250 Identities=24% Similarity=0.392 Sum_probs=216.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+|..++.||+|+|+.||.++. .+|+.||+|++.+....+ ....++..+||++.++++|||||+++++|++...+|+|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k-~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKK-PKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcC-cchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 4699999999999999999966 889999999998876544 34578899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+|+|+.++|..++++. +++++.+++.+++||+.|+.|||+. +|+|||||..|+|++++.++||+|||+|..+..
T Consensus 97 LELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EEecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999999854 4699999999999999999999999 999999999999999999999999999999987
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
+.....+.+|||-|.|||++.+..++..+||||+||++|-|++|++||+... ..+....+......++..
T Consensus 171 ~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--vkety~~Ik~~~Y~~P~~-------- 240 (592)
T KOG0575|consen 171 DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--VKETYNKIKLNEYSMPSH-------- 240 (592)
T ss_pred cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch--HHHHHHHHHhcCcccccc--------
Confidence 7777888999999999999999999999999999999999999999976332 222222222222222221
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+..++|.++|++||.+|||+.+|++
T Consensus 241 --ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 241 --LSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred --cCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1224567899999999999999999985
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=364.62 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=212.7
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeee-eEecC-CeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG-FCSNA-QHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~-~~~~~-~~~~ 835 (1031)
.+|.+.++||+|.||+||++ ...+|..+|.|.+..... +.+..++...|+.++++++|||||++++ -+.++ ..++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m--d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM--DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc--cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 46888899999999999999 677999999999985543 3456788999999999999999999998 44444 4589
Q ss_pred EEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCC-eeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 836 IVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPP-IVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
+||||+++|+|..+++.-. ..+.++++.+|+++.|+++||.++|.....| |+||||||.||+++.+|.|||+|||+++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 9999999999999997543 2356899999999999999999999954433 7799999999999999999999999999
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.+........+.+|||.||+||.+.+..|+.||||||+||++|||+.-+.||... +.......+. .. ..++.
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~---qg---d~~~~ 248 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIE---QG---DYPPL 248 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHH---cC---CCCCC
Confidence 9987766677899999999999999999999999999999999999999997644 3333333332 22 33333
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
+.+. ....+.++|..|+..||+.||+...++..+
T Consensus 249 p~~~--YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 249 PDEH--YSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred cHHH--hhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 3222 234678889999999999999865555443
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-48 Score=399.07 Aligned_cols=474 Identities=30% Similarity=0.393 Sum_probs=276.1
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+.++..+++|++++|++. ++|++++.+..++.|+.++|+++ ++|.+++.+.+|+.|++++|.+. ++|++|+.+..|+
T Consensus 64 l~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~ 140 (565)
T KOG0472|consen 64 LKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLE 140 (565)
T ss_pred hhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhh
Confidence 445555555555555554 55555555555555555555555 55555555555555555555555 5555555555555
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
.|+..+|+++ ++|+.++++.+|..|++.+|+++ ..|+..-+|+.|++||..+|.++ .+|..++.|.+|..|+|++|+
T Consensus 141 dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nk 217 (565)
T KOG0472|consen 141 DLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNK 217 (565)
T ss_pred hhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcc
Confidence 5555555555 55555555555555555555555 33333333555555555555555 455555555555555555555
Q ss_pred CCCCCCccccccccccccccccccccccCCcccc-cCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFS-NLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 335 (1031)
+.. +| +|.++..|++|+++.|++. .+|.... +++++.+|||..|+++ +.|..+.-+.+|+.||+|+|.+++ +|.
T Consensus 218 i~~-lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~ 292 (565)
T KOG0472|consen 218 IRF-LP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPY 292 (565)
T ss_pred ccc-CC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCc
Confidence 542 33 4555555555555555554 4444333 5555555555555555 455555555555555555555552 344
Q ss_pred cccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccc
Q 043316 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSL 415 (1031)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 415 (1031)
+++++ .|+.|-+.+|.+..+-.+.+..-+. .-++.|+. .+..-.+.......-
T Consensus 293 sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~-------------------~vLKyLrs-~~~~dglS~se~~~e------ 345 (565)
T KOG0472|consen 293 SLGNL-HLKFLALEGNPLRTIRREIISKGTQ-------------------EVLKYLRS-KIKDDGLSQSEGGTE------ 345 (565)
T ss_pred ccccc-eeeehhhcCCchHHHHHHHHcccHH-------------------HHHHHHHH-hhccCCCCCCccccc------
Confidence 45555 4555555555443221111110000 00001110 000000000000000
Q ss_pred cceeccccccccccccccCCCCCCCeeccccccccCcccccccCC--CccccccCcccccCCCCCCCccCCCCC-cEEEe
Q 043316 416 ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF--PKLGTFNASMNNIYGSIPPEIGDSSKL-QVLDL 492 (1031)
Q Consensus 416 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~--~~L~~L~l~~N~i~~~~p~~~~~l~~L-~~L~L 492 (1031)
...+. ..........+.+.+.|++++-+++.++...|... .-.+.++++.|++. .+|..+..+..+ +.+.+
T Consensus 346 ~~~t~-----~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~l 419 (565)
T KOG0472|consen 346 TAMTL-----PSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVL 419 (565)
T ss_pred ccCCC-----CCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHh
Confidence 00000 00001111222344455555555555444444222 23445555556654 456655555543 44666
Q ss_pred eCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCC
Q 043316 493 SSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572 (1031)
Q Consensus 493 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 572 (1031)
++|.+. .+|..++.+++|..|+|++|-+. .+|..++.+..|+.||+|.|++. ..|+++..+..|+.+-.++|++...
T Consensus 420 snn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~v 496 (565)
T KOG0472|consen 420 SNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSV 496 (565)
T ss_pred hcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccccc
Confidence 667665 88888899999999999998887 78999999999999999999998 7899998888999999999999888
Q ss_pred CchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccC
Q 043316 573 IPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLF 618 (1031)
Q Consensus 573 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 618 (1031)
.|..+.++.+|+.|||.+|.|. .+|+.+++|.+|++|.|+||+|+
T Consensus 497 d~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 497 DPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 8888999999999999999998 78999999999999999999998
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-44 Score=375.39 Aligned_cols=255 Identities=26% Similarity=0.355 Sum_probs=210.2
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhh---hcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM---ADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
+.|.+.+.||+|+||.|-+| +..+|+.||||++++....... .......+|+++|++++|||||+++++|...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 55788899999999999999 6678999999999876543321 1233467999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceEEecccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGI 911 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~ 911 (1031)
||||||++||+|.+.+-.+.. +.+..-..+++|++.|+.|||++ ||+||||||+|||+..+ -.+||+|||+
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred EEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccch
Confidence 999999999999999977653 56677788999999999999999 99999999999999876 5699999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCC---CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA---TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
|+..+ ....+.+.+||+.|.|||++.++.+ ..++|+||+||++|-+++|..||......... ...+ ...
T Consensus 326 AK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl-~eQI------~~G 397 (475)
T KOG0615|consen 326 AKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSL-KEQI------LKG 397 (475)
T ss_pred hhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccH-HHHH------hcC
Confidence 99876 4566788999999999999976543 34889999999999999999998765443211 1111 122
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
++...+..+.+...+..++|.+||..||++|||+.|+++
T Consensus 398 ~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 398 RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 333333444555667889999999999999999999875
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=361.20 Aligned_cols=261 Identities=21% Similarity=0.309 Sum_probs=209.7
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|+...++|+|+||+||+++.+ +|+.||||++.... +++.-.+-.+|||+++++++|||+|.++++|.....+++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese--dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE--DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC--ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 46788889999999999999654 69999999997653 3344566779999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||++..-|.+.-+... ..+...+.++++|+++|+.|+|++ ++|||||||+||+++.+|.+||||||+|+.+..
T Consensus 80 FE~~dhTvL~eLe~~p~---G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 80 FEYCDHTVLHELERYPN---GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred eeecchHHHHHHHhccC---CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 99998855555444332 367788999999999999999999 999999999999999999999999999999987
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH------HHhhhhcC---
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI------TEINQNLD--- 987 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~------~~~~~~~~--- 987 (1031)
++..++..+.|.+|+|||.+.| .+|++.+||||+||++.||++|.+-|...++....+.... .+....+.
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 7778899999999999999887 6899999999999999999999999887766432221111 01001000
Q ss_pred ----CCCC------CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 ----HRLP------TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ----~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
-++| +......+...-+.++++.|++.||++|++.+|++.
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 0111 111122223345789999999999999999999874
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=367.58 Aligned_cols=245 Identities=25% Similarity=0.340 Sum_probs=206.8
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.++||+|+||.||.++ ..+++.||+|++++..+.+. .+.+...+|..++.+++||+||+++..|++++.+|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~-~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK-KEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh-hhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 4689999999999999999994 45799999999998776543 567888999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|+||+.||.|..++++.+ .+++..++.++.+|+.||.|||+. ||||||+||+|||+|.+|+++|+|||+++...
T Consensus 103 Vld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 999999999999998764 488899999999999999999999 99999999999999999999999999999655
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
........++||+.|||||++.+..|+.++|.||+|+++|||++|.+||..... ..+.+.+.... ....+. .
T Consensus 177 ~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~--~~~~~~I~~~k---~~~~p~---~ 248 (357)
T KOG0598|consen 177 KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV--KKMYDKILKGK---LPLPPG---Y 248 (357)
T ss_pred cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH--HHHHHHHhcCc---CCCCCc---c
Confidence 555555668999999999999999999999999999999999999999764442 22222222211 111111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARP 1020 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rp 1020 (1031)
. ..+..+++.+.++.||++|-
T Consensus 249 l---s~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 249 L---SEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred C---CHHHHHHHHHHhccCHHHhc
Confidence 1 12456788889999999995
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=368.26 Aligned_cols=204 Identities=27% Similarity=0.466 Sum_probs=182.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
..+|...+.||+|+||+||+|++ .++..||||.+.+... ..+..+....|+.++++++|||||++++++..++.+|+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l--~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL--NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc--CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 46788888999999999999955 4689999999987653 23457778899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC------CceEEeccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE------HEAHVSDFG 910 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------~~~kl~Dfg 910 (1031)
|||||+||+|.+|++..+ .+++..++.++.|+|.|+++||++ +||||||||+|||++.. -.+||+|||
T Consensus 87 VMEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 999999999999999865 488899999999999999999999 99999999999999875 358999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCc
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVST 970 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~ 970 (1031)
+|+.+.+ .......+|++-|||||++..++|+.|+|+||+|+|+||+++|+.||+....
T Consensus 161 fAR~L~~-~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 161 FARFLQP-GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred hhhhCCc-hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 9999863 3445678899999999999999999999999999999999999999875443
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=379.52 Aligned_cols=250 Identities=25% Similarity=0.437 Sum_probs=206.1
Q ss_pred cCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEe
Q 043316 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
+...+.||+|.||+||.|++.....||+|.++... -..+.|.+|+++|++++|++||+++|+|..++.+||||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-----m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~ 282 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-----MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEY 282 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-----cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEe
Confidence 44567899999999999999777799999997753 2467899999999999999999999999999999999999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
|+.|+|.+|++... ...+...+...++.|||+|++||+++ ++|||||.++||||+++..+||+|||+|+....+.+
T Consensus 283 m~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 283 MPKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred cccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 99999999999833 35678899999999999999999999 999999999999999999999999999996543332
Q ss_pred C-ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 921 N-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 921 ~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
. .....-+..|.|||.+..+.++.|||||||||+||||+| |+.||+.... .+.++.+........|..
T Consensus 359 ~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-----~ev~~~le~GyRlp~P~~----- 428 (468)
T KOG0197|consen 359 TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-----EEVLELLERGYRLPRPEG----- 428 (468)
T ss_pred eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-----HHHHHHHhccCcCCCCCC-----
Confidence 1 222334678999999999999999999999999999999 9999765543 222222222222211211
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+...+.+++..||+.+|++|||++.+...++
T Consensus 429 -CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 429 -CPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred -CCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 2236778889999999999999999988876
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=371.62 Aligned_cols=254 Identities=25% Similarity=0.393 Sum_probs=217.0
Q ss_pred HHHHhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCC
Q 043316 755 IKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 755 ~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~ 832 (1031)
++...+|..++.||+|+|++||+| +..+++.||||++.+..+.++ ...+.+.+|-.+|.+| .||.|++++..|+++.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike-~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~ 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKE-KKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE 147 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhh-cccchhhHHHHHHHHhhCCCCeEEEEEEeeccc
Confidence 455678999999999999999999 556899999999988776554 3356677899999999 7999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
.+|+|+||+++|+|.++|+..+ .+++...+.++.+|+.|++|||++ |||||||||+|||+|.||++||+|||.|
T Consensus 148 sLYFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeecccc
Confidence 9999999999999999998764 588899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC-------------ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH
Q 043316 913 KFLNPHSSN-------------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 913 ~~~~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~ 979 (1031)
+.+.+.... ...++||..|.+||++..+..++.+|+|+|||++|+|+.|++||.... +....+.+
T Consensus 222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N--eyliFqkI 299 (604)
T KOG0592|consen 222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN--EYLIFQKI 299 (604)
T ss_pred ccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc--HHHHHHHH
Confidence 987542111 145899999999999999999999999999999999999999976444 33444445
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+...+++.+++ ...+++.+.|..||.+|+|++||.+
T Consensus 300 ~~l~y~fp~~fp~----------~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 300 QALDYEFPEGFPE----------DARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHhcccCCCCCCH----------HHHHHHHHHHccCccccccHHHHhh
Confidence 5555555555442 4567788889999999999999876
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=335.63 Aligned_cols=261 Identities=22% Similarity=0.275 Sum_probs=209.6
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|...+++|+|.||.||+| +..+|+.||||+++.....+. -.....|||+.++.++||||+.++++|...+...+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG--i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG--INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC--ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEE
Confidence 46778889999999999999 567899999999987653322 245678999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+|||+. +|+..+++.. ..++..++..++.++++|++|||++ .|+||||||.|++++++|.+||+|||+|+.+..
T Consensus 80 fEfm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred EEeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 999975 9999998764 3678899999999999999999999 899999999999999999999999999999987
Q ss_pred CCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC--------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH-------- 988 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~-------- 988 (1031)
+....+..+.|.+|+|||.+.|. .|+..+||||.|||+.||+-|.+-|.+.++-+ .............+.
T Consensus 154 p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDid-QL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 154 PNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDID-QLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred CCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHH-HHHHHHHHcCCCCcccCcccccc
Confidence 77777777899999999998875 58999999999999999999987766554421 111111111000000
Q ss_pred -------CCCCCCh--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 989 -------RLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 989 -------~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
..+.++. -.........+++.+|+..||.+|+|++|++++
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0111111 122233456889999999999999999998863
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=360.44 Aligned_cols=263 Identities=25% Similarity=0.349 Sum_probs=208.5
Q ss_pred HHHhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--C
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--Q 832 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~ 832 (1031)
+..+.|+..++||+|.||.||+| +..+|+.||+|++..+.. +........|||.++++++||||+++.+...+. +
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~--~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~ 191 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE--KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSG 191 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC--CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCc
Confidence 34566888889999999999999 567899999999977642 334567778999999999999999999999776 7
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
.+|+|+|||+. +|.-++.... -.+++.++..+++|++.||+|||++ ||+|||||.+|||+|.+|.+||+|||+|
T Consensus 192 siYlVFeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 192 SIYLVFEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred eEEEEEecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccce
Confidence 89999999987 7877776643 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh-------h
Q 043316 913 KFLNPHSS-NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI-------N 983 (1031)
Q Consensus 913 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~-------~ 983 (1031)
+++..... .++..+.|.+|+|||.+.|. .|+.++|+||.|||+.||++|++.|+...+.... ..+.+-+ .
T Consensus 266 r~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl-~kIfklcGSP~e~~W 344 (560)
T KOG0600|consen 266 RFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQL-HKIFKLCGSPTEDYW 344 (560)
T ss_pred eeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHH-HHHHHHhCCCChhcc
Confidence 98876554 47889999999999998875 6999999999999999999999998866553211 1111100 0
Q ss_pred h--hcC--CCCC--CC-ChhHHH----HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 Q--NLD--HRLP--TP-SRDVMD----KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~--~~~--~~~~--~~-~~~~~~----~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. .++ ..+. .. .....+ ......+++..+|..||.+|.|+.++++
T Consensus 345 ~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 345 PVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0 011 0000 01 011111 1124578889999999999999999875
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=385.51 Aligned_cols=255 Identities=25% Similarity=0.410 Sum_probs=207.9
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
.+....+.||+|+||+||+|+.. +...||||.++... +.+.+++|.||++.+..++|||||+++|+|.+++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a---~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA---ENQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc---cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 45566778999999999999642 35689999998765 3346889999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc-----------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA-----------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
.+++|+|||..|||.+||+...+ ..+++..+...||.|||.|++||.++ .+|||||..+|++|.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccc
Confidence 99999999999999999964321 22478899999999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCCCCC-ce-eeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhh
Q 043316 902 HEAHVSDFGIAKFLNPHSSN-WT-AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~~~~-~~-~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~ 978 (1031)
..|||+|||+++..-..++. .. ...-+.+|||||.|..++++.+||||||||++||+++ |+.||...... + .
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--E---V 714 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--E---V 714 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--H---H
Confidence 99999999999975433322 11 3345789999999999999999999999999999998 99997655442 1 1
Q ss_pred HHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
++.+.. ...-+.++ +...++++++..||+..|++||+++||-..|+
T Consensus 715 Ie~i~~---g~lL~~Pe---~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 715 IECIRA---GQLLSCPE---NCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred HHHHHc---CCcccCCC---CCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 111111 11111111 23447888999999999999999999998886
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=376.76 Aligned_cols=388 Identities=27% Similarity=0.276 Sum_probs=246.7
Q ss_pred ccccccccccccccCcccccc--CcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeec
Q 043316 224 SILDLSQNQLRGSIPFSLANL--SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301 (1031)
Q Consensus 224 ~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 301 (1031)
..||.+++.+...--..+... +.-+.|++++|++...-+..|.++++|+++++..|.++ .+|...+...+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 446777777663211122211 34456888888888887888888888888888888887 777666666668888888
Q ss_pred cCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCc
Q 043316 302 NNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVI 381 (1031)
Q Consensus 302 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 381 (1031)
+|.|+..-...+..++.|+.||||.|.|+...-.+|..-.++++|+|++|.|+..-...|..+.+|..|.|+.|+++...
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 88888666667777777888888888777555556666667777777777777766667777777777777777777666
Q ss_pred cccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCC
Q 043316 382 PHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFP 461 (1031)
Q Consensus 382 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 461 (1031)
+..|.+|++|+.|+|..|+|.-..--.|.++++|+.|.|..|.|.....++|..+.++++|+|+.|+++......+-+++
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt 293 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLT 293 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccc
Confidence 66677777777777777776655555667777777777777777666666676677777777777666665555555555
Q ss_pred ccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecC
Q 043316 462 KLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLS 541 (1031)
Q Consensus 462 ~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 541 (1031)
.|+.|++|+|.|...-++...-.++|++|+||+|+|+...+..|..+..|++|+|++|+++......|..+++|+.|||+
T Consensus 294 ~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr 373 (873)
T KOG4194|consen 294 SLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLR 373 (873)
T ss_pred hhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCc
Confidence 55555555555555555555555555555555555555555555555555555555555554444555555555555555
Q ss_pred cCcCCCCCc---ccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcC
Q 043316 542 ANKLSSSIP---KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLS 613 (1031)
Q Consensus 542 ~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 613 (1031)
+|.|+..+. ..|.+|++|+.|+|.+|+|..+...+|.++..|++|||.+|.|..+-|.+|..| +|++|.+.
T Consensus 374 ~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 374 SNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred CCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 555543222 234445555555555555554444455555555555555555554445555554 45554443
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=359.39 Aligned_cols=261 Identities=22% Similarity=0.334 Sum_probs=208.6
Q ss_pred HHhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCC-e
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQ-H 833 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~-~ 833 (1031)
..++|...++||.|.||+||+| ...++..||||+++++... .+.-.-.||+..+++++ |||||++.+++.+.+ .
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s---~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc---HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 4578999999999999999999 4567999999999876432 11223479999999999 999999999998887 9
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
+|+|||||+. +|.+++++. .+.+++.+++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+
T Consensus 85 L~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 85 LYFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAR 158 (538)
T ss_pred EeeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccc
Confidence 9999999975 999999887 46799999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCCceeeccccCcccccccc-ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH-------------
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAH-MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI------------- 979 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~------------- 979 (1031)
.+.. ...++..+.|.+|+|||++. .+.|+.+.|+||+|||++|+.+=++-|.+..+.+ .+..+.
T Consensus 159 ev~S-kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D-qi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 159 EVRS-KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID-QIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred cccc-CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH-HHHHHHHHhCCCccccchh
Confidence 8753 34467889999999999865 5678999999999999999999988887665521 111111
Q ss_pred -----HHhhhhcCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 980 -----TEINQNLDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 980 -----~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
..+.-.+++..+..-.. ......+..+++.+|+++||++||||+|.++.
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111111111111111 12234567899999999999999999999863
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=370.13 Aligned_cols=389 Identities=27% Similarity=0.250 Sum_probs=272.8
Q ss_pred cEEEecccccccccCcccccc--cccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccc
Q 043316 200 AYLYLNNNSLFGSIPNVMGNL--NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLS 277 (1031)
Q Consensus 200 ~~L~l~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 277 (1031)
..|+++++.+...--..+.++ ..-+.||+++|+++..-+..|.++++|+++++.+|.++. +|.......+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~-IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTR-IPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhh-cccccccccceeEEeee
Confidence 446666666642211122221 223457777777776666667777777777777777763 55555555557777777
Q ss_pred cccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCcc
Q 043316 278 ENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV 357 (1031)
Q Consensus 278 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 357 (1031)
+|.|+..-...+..++.|+.|||+.|.|+...-+.|..-.++++|+|++|+|+..-...|.++.+|..|.|+.|+++...
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 77777655666777777777777777777555556666667777777777777666667777777777777777777776
Q ss_pred CCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCC
Q 043316 358 PNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHP 437 (1031)
Q Consensus 358 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 437 (1031)
+..|.+|++|+.|+|..|+|.-.---.|.+|++|+.|.|..|.|..+..+.|..+.++++|+|+.|++.....+.+.++.
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt 293 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLT 293 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccc
Confidence 66777777777777777777644345677777777777777777777777777777777777777777777777777777
Q ss_pred CCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecc
Q 043316 438 NLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILN 517 (1031)
Q Consensus 438 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 517 (1031)
.|+.|+||+|.|..+....|...++|++|+|++|+|+...+..|..+..|++|+|++|.|+.+-..+|..+++|++|||+
T Consensus 294 ~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr 373 (873)
T KOG4194|consen 294 SLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLR 373 (873)
T ss_pred hhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCc
Confidence 77777777777777777777777777777777777777777777777777777777777776666677777777777777
Q ss_pred cccccCCCcc---cccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccC
Q 043316 518 LNQLSGGVPL---EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590 (1031)
Q Consensus 518 ~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 590 (1031)
+|.|+..+.+ .|.++++|+.|+|.+|+|+.+...+|.++..|++|||.+|.|..+.|++|..+ +|++|.++.
T Consensus 374 ~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 374 SNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred CCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 7777755443 56677777777777777776555677777777777777777777777777777 777766543
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=377.54 Aligned_cols=252 Identities=28% Similarity=0.512 Sum_probs=211.2
Q ss_pred cCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
..+.++||.|.||+||+|+++ ....||||.++.... .+...+|+.|..+|.+++||||+++.|+.......+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt---ekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT---EKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc---HHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEE
Confidence 456789999999999999664 246899999987653 3457889999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|+|||++|+|+.||+.+. +++++.++..++++||.|+.||.+. ++|||||.++|||++.+..+|++|||+++.++
T Consensus 708 iTEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred EhhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecc
Confidence 999999999999999876 4699999999999999999999999 99999999999999999999999999999886
Q ss_pred CCCCC-ceee--ccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 917 PHSSN-WTAF--AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 917 ~~~~~-~~~~--~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
++... ++.. .-+.+|.|||.+...+++.+|||||||+++||.++ |.+||=++.. .+ .+..+.. .-++|+
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--Qd---VIkaIe~--gyRLPp 855 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QD---VIKAIEQ--GYRLPP 855 (996)
T ss_pred cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--HH---HHHHHHh--ccCCCC
Confidence 55432 2322 23689999999999999999999999999999998 9999543332 11 1222211 223333
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+ +++...+.+++..||++|-.+||.+.||+..|+|
T Consensus 856 P----mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk 890 (996)
T KOG0196|consen 856 P----MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK 890 (996)
T ss_pred C----CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 2 3455678899999999999999999999999875
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=347.27 Aligned_cols=258 Identities=27% Similarity=0.395 Sum_probs=212.1
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|+..+.||.|..++||+| ..+.++.||||++.-..... +.+.+.+|+..++.++||||++++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~---~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN---DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh---hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 57899999999999999999 56788999999998765433 478899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|.||.+|++.+.++...+. -+++..+..|++++++||.|||.+ |.||||||+.|||++.+|.|||+|||.+..+..
T Consensus 103 mpfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred ehhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 9999999999999877543 388999999999999999999999 999999999999999999999999999876654
Q ss_pred CCCCc----eeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC-
Q 043316 918 HSSNW----TAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL- 990 (1031)
Q Consensus 918 ~~~~~----~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~- 990 (1031)
.+... ..++||++|||||+++. ..|+.|+||||||+...||.+|..||.........+ ..+....+...
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl----~tLqn~pp~~~t 254 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL----LTLQNDPPTLLT 254 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH----HHhcCCCCCccc
Confidence 43322 45689999999999654 358999999999999999999999988665522111 22222111100
Q ss_pred -CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 -PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 -~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...........+.+.+++..|+++||.+|||++++++
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1122223334457889999999999999999999875
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=352.24 Aligned_cols=252 Identities=26% Similarity=0.397 Sum_probs=200.1
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC--eeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--HSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--~~~ 835 (1031)
.++..++.||+|+||+||++... +|+..|||.+..... ...+.+.+|+.++++++|||||+++|...... .++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~----~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS----PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc----hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 45677889999999999999554 599999999866421 12677899999999999999999999855444 689
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEeccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVSDFGIAKF 914 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~ 914 (1031)
+.|||+++|+|.+++...+. .+++..+..+++||++||+|||++ |||||||||+|||++. ++.+||+|||+++.
T Consensus 93 i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 99999999999999998763 589999999999999999999999 9999999999999999 79999999999987
Q ss_pred cCC---CCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNP---HSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
... .........||+.|||||++..+ ...+++||||+||++.||+||+.||..... ..............+.+
T Consensus 168 ~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~---~~~~~~~ig~~~~~P~i 244 (313)
T KOG0198|consen 168 LESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE---EAEALLLIGREDSLPEI 244 (313)
T ss_pred cccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc---hHHHHHHHhccCCCCCC
Confidence 763 11223467899999999999853 344699999999999999999999875311 11111111111111222
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
+. . ......+++.+|++.||++||||.|+++.
T Consensus 245 p~---~---ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 245 PD---S---LSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred Cc---c---cCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 22 2 22256678899999999999999999864
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=360.84 Aligned_cols=249 Identities=25% Similarity=0.416 Sum_probs=210.6
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
..|..-.+||+|+.|.||.| +..+++.||||++.... ....+-+.+|+.+|+..+|+|||++++.|..++.+|+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~----Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK----QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc----CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 44667778999999999999 56689999999997654 23466789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||||+||+|.|.+.... +++.++..|++++++||+|||.+ ||+|||||.+||+++.+|.+||+|||++..+..
T Consensus 349 MEym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred EeecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 99999999999987653 88999999999999999999999 999999999999999999999999999999877
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
........+||+.|||||++....|++|+||||||++++||+-|++||=..... ..+ ..+...-.+++. ..
T Consensus 422 ~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl-rAl----yLIa~ng~P~lk----~~ 492 (550)
T KOG0578|consen 422 EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-RAL----YLIATNGTPKLK----NP 492 (550)
T ss_pred ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH-HHH----HHHhhcCCCCcC----Cc
Confidence 766778899999999999999999999999999999999999999996432221 111 111111122222 12
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+++.+||+.||++||+++|+++
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 233457889999999999999999999986
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=356.20 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=210.5
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.|||| +..+.+.||+|.+.+.. ...++.+.+.+|++++++++|||||.++++|+...+.|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g--r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG--RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC--CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 46778888999999999999 45578999999997764 3345678899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+.| +|..++.+... ++++.+..++.+++.||.|||+. +|.|||+||+||+++..|.+|+||||+|+.+..
T Consensus 80 te~a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred ehhhhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 999987 99999988654 88899999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.....+...||+-|||||...+++|+..+|.||+||++||+++|++||- ... +...++.+.. .+..++ .
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~--a~s---i~~Lv~~I~~-d~v~~p---~-- 221 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFY--ARS---ITQLVKSILK-DPVKPP---S-- 221 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCch--HHH---HHHHHHHHhc-CCCCCc---c--
Confidence 7777788899999999999999999999999999999999999999963 211 1222222211 122222 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+....+..++...+.+||.+|.|..+++.
T Consensus 222 -~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 -TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 33446777888999999999999988764
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=359.86 Aligned_cols=249 Identities=22% Similarity=0.325 Sum_probs=210.8
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.-|+.++.||+|+.|.|..|+ ..+|+.+|||++.+... -.......+.+||-+|+-+.||||+++|+++++..++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~-~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSE-LSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccc-cccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 457778899999999999994 56899999999977531 1123356788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
.||+++|-|++++...+ ++++.++.++++||+.|+.|+|+. +|+|||+||+|+++|..+++||+|||||... .
T Consensus 91 lEyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe-~ 163 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE-V 163 (786)
T ss_pred EEecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc-c
Confidence 99999999999998765 488899999999999999999999 9999999999999999999999999999864 3
Q ss_pred CCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
++....+.+|++.|.|||++.|.+| +.++||||+|||+|.|+||+.||+ +++.......++.....++..++
T Consensus 164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd--DdNir~LLlKV~~G~f~MPs~Is----- 236 (786)
T KOG0588|consen 164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD--DDNIRVLLLKVQRGVFEMPSNIS----- 236 (786)
T ss_pred CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC--CccHHHHHHHHHcCcccCCCcCC-----
Confidence 4556678899999999999999988 679999999999999999999988 33333333333333333333333
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+..+++++|+..||++|.|++||.+
T Consensus 237 -----~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 237 -----SEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred -----HHHHHHHHHHhccCccccccHHHHhh
Confidence 25678899999999999999999986
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=360.73 Aligned_cols=254 Identities=23% Similarity=0.335 Sum_probs=208.6
Q ss_pred HHhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhh-hcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCe
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM-ADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~-~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~ 833 (1031)
..++|..++.||+|+||+|+.| ...+++.||+|++.+....... ...+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 3467999999999999999999 4557899999987765332121 33556678999999999 9999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEeccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGIA 912 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 912 (1031)
.++||||+.+|+|.+++... +++.+.++..+++|++.|++|||++ ||+||||||+||+++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~---g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNK---GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999874 3577899999999999999999999 99999999999999999 99999999999
Q ss_pred cccCCCCCCceeeccccCccccccccccC-CC-ccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 913 KFLNPHSSNWTAFAGTFGYAAPEIAHMMR-AT-EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 913 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
..............||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++... ......+......++..+
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~--~~l~~ki~~~~~~~p~~~ 246 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV--PNLYRKIRKGEFKIPSYL 246 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH--HHHHHHHhcCCccCCCCc
Confidence 98743445567889999999999999877 74 799999999999999999999987332 112221111111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ..+..+++.+|+..||.+|+|+.||++
T Consensus 247 ~---------S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 247 L---------SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred C---------CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 0 336778899999999999999999973
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=325.37 Aligned_cols=239 Identities=24% Similarity=0.326 Sum_probs=202.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|+..+.||.|+||.|..++. .+|..||+|+++++.+.+ ....+...+|..+++.+.||+++++++.|.+.+.+|+|
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVk-lKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVK-LKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHH-HHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 5788999999999999999955 468999999998876543 45577789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++||-|..+++..+ ++++..++.+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||+|+....
T Consensus 123 meyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EeccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999999865 588899999999999999999999 999999999999999999999999999998753
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
...+.+||+.|+|||++..+.+..++|.|||||++|||+.|..||-.... ......+-.....++..+..
T Consensus 197 ---rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~~iY~KI~~~~v~fP~~fs~----- 266 (355)
T KOG0616|consen 197 ---RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--IQIYEKILEGKVKFPSYFSS----- 266 (355)
T ss_pred ---cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--HHHHHHHHhCcccCCcccCH-----
Confidence 24568999999999999999999999999999999999999999754443 23333333333333333332
Q ss_pred HHHHHHHHHHHHhhccCCCCCC
Q 043316 998 MDKLMSIMEVAILCLVESPEAR 1019 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~R 1019 (1031)
.+.++++..++.|-.+|
T Consensus 267 -----~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 267 -----DAKDLLKKLLQVDLTKR 283 (355)
T ss_pred -----HHHHHHHHHHhhhhHhh
Confidence 45566677778787777
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=355.75 Aligned_cols=256 Identities=25% Similarity=0.359 Sum_probs=207.6
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+++.+++.||+|.||+||+|+| . ..||||+++......+ ..+.|.+|+.++++-+|.||+-+.|||..++. .||
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~w-h-GdVAVK~Lnv~~pt~~--qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRW-H-GDVAVKLLNVDDPTPE--QLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred HHHhhccceeccccccceeeccc-c-cceEEEEEecCCCCHH--HHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 35567788999999999999987 2 3689999987765443 68899999999999999999999999999888 999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+.+|+|.+|..+++... ..+++.+.+.||+|||+|+.|||++ +|||||||..|||+.+++.|||+|||++..-..
T Consensus 466 TqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred ehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeee
Confidence 99999999999998765 4688899999999999999999999 999999999999999999999999999975432
Q ss_pred C--CCCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 918 H--SSNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 918 ~--~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
- ........|...|||||++.. .+|++++||||||+|+|||+||..||..... ..+..++...... + .
T Consensus 541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~--dqIifmVGrG~l~--p---d 613 (678)
T KOG0193|consen 541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR--DQIIFMVGRGYLM--P---D 613 (678)
T ss_pred eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh--hheEEEecccccC--c---c
Confidence 2 223344567889999999875 3689999999999999999999999872222 2222222221111 1 1
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
......+..+++.+++..||.+++++||.+.+|+..|+
T Consensus 614 ~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 614 LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 11222344557888899999999999999999999775
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=315.29 Aligned_cols=253 Identities=27% Similarity=0.425 Sum_probs=215.7
Q ss_pred HHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.+.++|++++.||+|.||.||.|+ .+++..||+|++.+.... .....+++.+|+++...++||||+++|++|.+....
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~-~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri 97 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQIL-KTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI 97 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHH-HhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence 345789999999999999999995 457889999999776643 335577899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+++||..+|.+...++... ..++++.....+..|+|.|+.|+|.. +|+||||||+|+|++.++..|++|||-+..
T Consensus 98 yLilEya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred EEEEEecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 99999999999999998543 35688899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
. +.......+||..|.|||+..+..++.++|+|++|++.||++.|..||+... ..+..+.+.+....++..++
T Consensus 174 ~--p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--~~etYkrI~k~~~~~p~~is--- 246 (281)
T KOG0580|consen 174 A--PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--HSETYKRIRKVDLKFPSTIS--- 246 (281)
T ss_pred c--CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--hHHHHHHHHHccccCCcccC---
Confidence 4 2555678899999999999999999999999999999999999999987554 33333333333333332222
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++|.+|+.++|.+|.+..|+++
T Consensus 247 -------~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 247 -------GGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred -------hhHHHHHHHHhccCccccccHHHHhh
Confidence 25678899999999999999999876
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=334.24 Aligned_cols=249 Identities=23% Similarity=0.377 Sum_probs=212.7
Q ss_pred HhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
..+|++.+.||+|.||.|-+| ....|+.||||.++++.+. +.++...+.+||++|..++||||+.+|++|+..+...+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIk-deqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIK-DEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcc-cHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 357888899999999999999 5578999999999988754 45678889999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||..+|.|.||+...+ .+++.+++++++||+.|+.|+|.+ ++||||||.+||++|.++++||+|||++..+.
T Consensus 131 vMEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc
Confidence 999999999999998764 589999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
+....++++|++-|.+||++.|.+| ++.+|.||+|+++|-+..|..||+..+.. ..+..+......+... +.
T Consensus 205 -~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-----~lvrQIs~GaYrEP~~-PS 277 (668)
T KOG0611|consen 205 -DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-----RLVRQISRGAYREPET-PS 277 (668)
T ss_pred -cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-----HHHHHhhcccccCCCC-Cc
Confidence 3455688999999999999999887 68999999999999999999999866542 2222222222111111 11
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...-+|++|+..+|++|.|+.+|..
T Consensus 278 -------dA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 278 -------DASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred -------hHHHHHHHHHhcCcccchhHHHHhh
Confidence 2234788999999999999999864
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=344.84 Aligned_cols=254 Identities=22% Similarity=0.264 Sum_probs=206.8
Q ss_pred HHhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
..++|+...+||+|+||.||.| +..+|..+|+|++++..... ....+.+..|-.+|...++|+||+++..|++...+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~-~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLK-KNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHh-hhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 4588999999999999999999 45579999999999876543 345777889999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||++||++..+|...+ .+++..++.++.+++.|++.+|+. |+|||||||+|+|||..|++||+|||++.-+
T Consensus 218 LiMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 9999999999999998754 488999999999999999999999 9999999999999999999999999999533
Q ss_pred CC----------------------CCCC-------------------------ceeeccccCccccccccccCCCccccc
Q 043316 916 NP----------------------HSSN-------------------------WTAFAGTFGYAAPEIAHMMRATEKYDV 948 (1031)
Q Consensus 916 ~~----------------------~~~~-------------------------~~~~~gt~~y~aPE~~~~~~~~~~sDv 948 (1031)
.. .... ....+|||.|||||++.+..|+..+|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 11 0000 013579999999999999999999999
Q ss_pred hhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCC---HHHH
Q 043316 949 HSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT---MKKV 1025 (1031)
Q Consensus 949 wslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~ev 1025 (1031)
||+|||+|||+.|-+||..... ...+...+.+-.....+.-.... .+..++|.+|+. ||++|-- ++||
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp-~~T~rkI~nwr~~l~fP~~~~~s-------~eA~DLI~rll~-d~~~RLG~~G~~EI 442 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETP-QETYRKIVNWRETLKFPEEVDLS-------DEAKDLITRLLC-DPENRLGSKGAEEI 442 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhhhccCCCcCccc-------HHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence 9999999999999999864443 23334333332222222222111 356788899998 9999974 5555
Q ss_pred H
Q 043316 1026 C 1026 (1031)
Q Consensus 1026 l 1026 (1031)
.
T Consensus 443 K 443 (550)
T KOG0605|consen 443 K 443 (550)
T ss_pred h
Confidence 4
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-40 Score=346.71 Aligned_cols=249 Identities=25% Similarity=0.395 Sum_probs=211.3
Q ss_pred ccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.|+..+.||+|+||.||+| ...+++.||+|++..... ..+.+++.+|+.++.+++++||.++|+.+..+..++++|
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~---~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA---EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhc---chhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 4667788999999999999 567899999999977653 234677889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+.||++.+.++.... +++.++.-|++++..|+.|+|.+ +.+|||||+.||++..+|.+|++|||.+..+...
T Consensus 91 ey~~gGsv~~lL~~~~~---~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNI---LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHhcCcchhhhhccCCC---CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech
Confidence 99999999999987653 36678888999999999999999 9999999999999999999999999999987666
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
......++||+.|||||++++..|+.|+||||||++.+||.+|.+|+...... ++...++...++....
T Consensus 165 ~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm---------rvlflIpk~~PP~L~~-- 233 (467)
T KOG0201|consen 165 VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM---------RVLFLIPKSAPPRLDG-- 233 (467)
T ss_pred hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc---------eEEEeccCCCCCcccc--
Confidence 55567899999999999999889999999999999999999999998766551 1111222222222221
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.....+.+++..|+.+||+.||+|.++++.
T Consensus 234 ~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 234 DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 444567888999999999999999999863
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=325.52 Aligned_cols=262 Identities=20% Similarity=0.257 Sum_probs=204.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--CCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--AQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~~~ 834 (1031)
++.|+..++|++|.||.||+|+. .+++.||+|+++-.. +...--....|||.++.+.+|||||.+..+... -+.+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek--ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK--EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc--ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 46788899999999999999954 579999999997654 222234567899999999999999999998754 4679
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||++. +|...+..-. +++...++..+..|+++|++|||++ .|+||||||+|++++..|.+||+|||+|+.
T Consensus 153 y~VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred eeeHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhh
Confidence 999999986 8888887643 4688999999999999999999999 899999999999999999999999999999
Q ss_pred cCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccc--hhhhhhHHHhhhhcCCCC-
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNF--SSFSNMITEINQNLDHRL- 990 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~- 990 (1031)
++.+...++..+.|.+|+|||.+.+. .|++++|+||+|||+.||+++++-|.....-. ..+......-.+.+.+.+
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 98887788999999999999998875 58999999999999999999998876554421 111111100000111111
Q ss_pred ----------CCCChh-HHHH------HHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 ----------PTPSRD-VMDK------LMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ----------~~~~~~-~~~~------~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+..+.. .... ...-.+++...+..||++|.|+.|.++
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 110000 0000 123467888999999999999999875
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=358.04 Aligned_cols=257 Identities=23% Similarity=0.386 Sum_probs=201.3
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~ 831 (1031)
++|.+.++||+|+||.||+|.. .+++.||||+++.... ....+.+.+|+.++.++ +||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT---ASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc---hHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 5789999999999999999953 2357899999875431 22356789999999999 899999999988764
Q ss_pred -CeeEEEEEeccCCCchhhcccCCc-------------------------------------------------------
Q 043316 832 -QHSFIVSEYLDRGSLTTILKDDAA------------------------------------------------------- 855 (1031)
Q Consensus 832 -~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 855 (1031)
+.+++||||+++|+|.+++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 468999999999999999864321
Q ss_pred ----cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC--ceeecccc
Q 043316 856 ----AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTF 929 (1031)
Q Consensus 856 ----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~ 929 (1031)
...+++.++..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+++........ .....++.
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 12477888999999999999999999 9999999999999999999999999999865332211 12334567
Q ss_pred CccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHH
Q 043316 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVA 1008 (1031)
Q Consensus 930 ~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 1008 (1031)
.|+|||++.+..++.++|||||||++|||++ |..||....... .+. ...........+. .....+.+++
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~---~~~~~~~~~~~~~------~~~~~l~~li 310 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFC---QRLKDGTRMRAPE------NATPEIYRIM 310 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHH---HHHhcCCCCCCCC------CCCHHHHHHH
Confidence 8999999998899999999999999999997 999987544321 111 1111111111111 1123577899
Q ss_pred HhhccCCCCCCCCHHHHHHHhhC
Q 043316 1009 ILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 1009 ~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.+||+.||++|||+.|+++.|++
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~ 333 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGD 333 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHH
Confidence 99999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=341.63 Aligned_cols=260 Identities=21% Similarity=0.346 Sum_probs=207.5
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+...++++||+|.||+|..+....+..||||.++.... .....+|.+|+++|.+++|||||+++|+|..++.+++|+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~---~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT---KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccc---hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 45677899999999999999987789999999987652 234688999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
|||++|+|..|+..+.... ..-..-.+|+.|||.|++||.+. ++||||+.++|+|+|.++++||+|||+++-+-..
T Consensus 615 EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccC
Confidence 9999999999998875322 34456677999999999999999 9999999999999999999999999999965433
Q ss_pred CCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh--CCCCCCCcCccchhhhhhHHHhhhhcCCCCCC-C
Q 043316 919 SSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK--GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT-P 993 (1031)
Q Consensus 919 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt--G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 993 (1031)
++. ....+-+.+|||||.+..++++.+||||+||+++||+++ ...||+...+. +.++......+..-.. -
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e-----~vven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE-----QVVENAGEFFRDQGRQVV 765 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH-----HHHHhhhhhcCCCCccee
Confidence 322 234566889999999999999999999999999999986 78887755542 1122111111111000 0
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.....-+..++.+++.+||..|.++||+++++...|+
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 0000112236778999999999999999999998875
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=345.80 Aligned_cols=239 Identities=29% Similarity=0.457 Sum_probs=198.4
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
..+-||.|+.|.||+|++ .++.||||+++... ..+|+-+++++||||+.|.|+|....-+|||||||.
T Consensus 128 ELeWlGSGaQGAVF~Grl-~netVAVKKV~elk-----------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-----------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhhccCcccceeeeec-cCceehhHHHhhhh-----------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccc
Confidence 456799999999999998 68899999875422 257888999999999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
.|-|...++... .++......|.++||.|+.|||.+ .|||||||.-||||+.+..|||+|||-++..... ..+
T Consensus 196 ~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STk 268 (904)
T KOG4721|consen 196 QGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STK 268 (904)
T ss_pred cccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hhh
Confidence 999999998765 367788899999999999999999 9999999999999999999999999999977544 456
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
..++||..|||||++.+.+.+.|+||||||||||||+||..||.+.+..... +......+.-..+. .+..
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII----wGVGsNsL~LpvPs------tcP~ 338 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII----WGVGSNSLHLPVPS------TCPD 338 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE----EeccCCcccccCcc------cCch
Confidence 6789999999999999999999999999999999999999998766542111 11111111111111 1122
Q ss_pred HHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 1003 SIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+.-+++.||+..|..||++++|+..|+
T Consensus 339 GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 339 GFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 4556788999999999999999998774
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-38 Score=333.05 Aligned_cols=257 Identities=29% Similarity=0.447 Sum_probs=196.5
Q ss_pred cCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHh--cCCCCceeeeeeeEecCC----ee
Q 043316 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT--EIRHRNIIKFHGFCSNAQ----HS 834 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~--~l~h~niv~l~~~~~~~~----~~ 834 (1031)
....+.+|+|.||.||+|.. +++.||||++... +.+.|.+|-++.+ .++|+||++++++-.... .+
T Consensus 212 l~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~-------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ-------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhhHHHhhcCccceeehhhc-cCceeEEEecCHH-------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 44556799999999999988 5699999999653 4677777777755 568999999999876655 88
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC------CCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC------LPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
++|+||.+.|+|.+|++.+. ++|....+|+..+++||+|||+.. .++|+|||||.+||||..|+++.|+|
T Consensus 284 wLVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred eEEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 99999999999999999874 899999999999999999999763 46899999999999999999999999
Q ss_pred cccccccCCCCC--CceeeccccCccccccccccC------CCccccchhhhHHHHHHHhCCCCCC-CcCc---------
Q 043316 909 FGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMR------ATEKYDVHSFGVLALEVIKGNHPRD-YVST--------- 970 (1031)
Q Consensus 909 fg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~il~elltG~~P~~-~~~~--------- 970 (1031)
||+|..+.+... .....+||.+|||||++.+.- .-.+.||||+|.|+|||++...-++ ...+
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 999998865432 234478999999999987742 2347899999999999998653321 1111
Q ss_pred --cchhhhhhHH-HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 971 --NFSSFSNMIT-EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 971 --~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+..+.. .+.....+.++..-... ..+..+.+.+..||..||+.|.|+.=+-+++.
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~ 501 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEARLTAGCVEERMA 501 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHH
Confidence 1111222221 11222333333322222 33556888999999999999999987776653
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=380.07 Aligned_cols=504 Identities=31% Similarity=0.350 Sum_probs=311.5
Q ss_pred ecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCc-cccccccceEEEeeccccCCCCCccccCcccCceeeccCccc
Q 043316 107 NLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQ-EIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNF 185 (1031)
Q Consensus 107 ~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 185 (1031)
|+|+.+++ .||..+..-..++.|+++.|.+- ..|- .+.+..+|+.||+++|++. ..|..|..+.+|+.|.++.|.+
T Consensus 4 d~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 4 DASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred ccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 34444443 44444443333555555555443 2221 1222333555555555544 4555555555555555555555
Q ss_pred CCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccc
Q 043316 186 SGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI 265 (1031)
Q Consensus 186 ~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 265 (1031)
. .+|.+.+++.+|++|.|.+|.+. ..|..+..+++|++||+|.|++. .+|..+..++.++.+..++|.... .+
T Consensus 81 ~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~----~l 153 (1081)
T KOG0618|consen 81 R-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQ----RL 153 (1081)
T ss_pred h-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhh----hh
Confidence 4 45555555555555555555554 45555555555555555555554 455555555555555555552111 12
Q ss_pred cccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCce
Q 043316 266 GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRT 345 (1031)
Q Consensus 266 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 345 (1031)
+... .+.+++..|.+.+.++..+..++. .|+|++|.+. -..+.++.+|+.+....|++... .-.-++|+.
T Consensus 154 g~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~ 223 (1081)
T KOG0618|consen 154 GQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSEL----EISGPSLTA 223 (1081)
T ss_pred cccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceE----EecCcchhe
Confidence 2222 555555555555555555555544 4566666554 22344555566666666665532 112356667
Q ss_pred EEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecccccc
Q 043316 346 LYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425 (1031)
Q Consensus 346 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 425 (1031)
|+.++|.++...+. ..-.+|+++++++|++++ +|++++.+.+|+.++...|+++ ..|..+....+|+.|.+..|.+
T Consensus 224 L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel 299 (1081)
T KOG0618|consen 224 LYADHNPLTTLDVH--PVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNEL 299 (1081)
T ss_pred eeeccCcceeeccc--cccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhh
Confidence 77777766633221 223456777777777763 3467777777777777777773 3455566666777777777766
Q ss_pred ccccccccCCCCCCCeeccccccccCcccccccCCCc-cccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhh
Q 043316 426 FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPK-LGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ 504 (1031)
Q Consensus 426 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~-L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 504 (1031)
..+++ .......|++|+|..|+|...+...+..... +..++.+.|++....--.=..+..|+.|++.+|+++...-..
T Consensus 300 ~yip~-~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~ 378 (1081)
T KOG0618|consen 300 EYIPP-FLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPV 378 (1081)
T ss_pred hhCCC-cccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhh
Confidence 54443 3344667777777777777666655555544 666777767665332112223456888888888888777777
Q ss_pred hhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccC
Q 043316 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS 584 (1031)
Q Consensus 505 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 584 (1031)
+.+...|+.|+|++|+|.......+.++..|++|+||+|+|+ .+|..+..+..|++|...+|+|. ..| .+..++.|+
T Consensus 379 l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~ 455 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLK 455 (1081)
T ss_pred hccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcce
Confidence 888888888888888888444456788889999999999998 78889999999999999999996 566 888899999
Q ss_pred ceeccCcccCCcC-CccccCcccchhhhcCCCccCCCCccccccCCcceEEecccc
Q 043316 585 ELDLSHNFLQGEI-PPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639 (1031)
Q Consensus 585 ~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 639 (1031)
.+|+|.|+|+... |..... ++|++|||+||.=.......|..+.+++.++++-|
T Consensus 456 ~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 456 VLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred EEecccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 9999999998543 333332 89999999999865666777888888888888877
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=351.29 Aligned_cols=255 Identities=25% Similarity=0.369 Sum_probs=203.7
Q ss_pred hccCccceeecCCCccEEEEEeCC--C---cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS--G---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
++....++||+|+||.||+|+... + ..||||..+.... .......+|++|.++|++++|||||++||++....+
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~-~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE-LTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeeccccc-ccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 344556899999999999996532 3 2389999875221 223467899999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
+++|||+|+||+|.++++.... .++..+...++.++|.||+|||++ +++||||.++|+|++.++.+||+|||+++
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccccc
Confidence 9999999999999999998653 588999999999999999999999 99999999999999999999999999988
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHh-hhhcCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEI-NQNLDHRLP 991 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 991 (1031)
.-...........-+.+|+|||.+..+.+++++|||||||++||+++ |..||...... ....++ ........+
T Consensus 311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-----~v~~kI~~~~~r~~~~ 385 (474)
T KOG0194|consen 311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-----EVKAKIVKNGYRMPIP 385 (474)
T ss_pred CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-----HHHHHHHhcCccCCCC
Confidence 54311111112245789999999999999999999999999999999 88897755542 222222 222222222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. .....+..++.+||..||++||+|.++.+.++
T Consensus 386 ~------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 386 S------KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred C------CCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 2 11234566777999999999999999999886
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=332.82 Aligned_cols=257 Identities=23% Similarity=0.315 Sum_probs=200.5
Q ss_pred HHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh----------hhhcHHHHHHHHHHHhcCCCCceee
Q 043316 755 IKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD----------EMADQDEFLNEVLALTEIRHRNIIK 823 (1031)
Q Consensus 755 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----------~~~~~~~~~~Ei~~l~~l~h~niv~ 823 (1031)
.+..++|++.+.||+|.||.|-+|+. .+++.||||++.+..... .....++..+||.++++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 45668899999999999999999954 579999999997654321 1112368899999999999999999
Q ss_pred eeeeEecC--CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 824 FHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 824 l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
++++..+. +.+|||+|||..|.+.+.=... .++++.++++++++++.||+|||.+ |||||||||+|+|++++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~---~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDK---PELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCCCc---ccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCC
Confidence 99998664 6899999999988775443222 2389999999999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCC-----CCCceeeccccCccccccccccC----CCccccchhhhHHHHHHHhCCCCCCCcCccc
Q 043316 902 HEAHVSDFGIAKFLNPH-----SSNWTAFAGTFGYAAPEIAHMMR----ATEKYDVHSFGVLALEVIKGNHPRDYVSTNF 972 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~elltG~~P~~~~~~~~ 972 (1031)
|+|||+|||.+...... .......+||+.|+|||...++. .+.+.||||+||+||.|+.|+.||-+.. .
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~--~ 324 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF--E 324 (576)
T ss_pred CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch--H
Confidence 99999999999876221 22234578999999999877632 3678999999999999999999964322 1
Q ss_pred hhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 973 SSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+. ..+-.++..+ +....+.++|+++|.+||++|.+..+|..
T Consensus 325 ~~l~~KIv----n~pL~fP~~p----e~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 325 LELFDKIV----NDPLEFPENP----EINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred HHHHHHHh----cCcccCCCcc----cccHHHHHHHHHHhhcChhheeehhhhee
Confidence 11111111 1122222221 23346788999999999999999999864
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=313.95 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=207.2
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|.|+.||++ +.++|+.+|+|++........ +.+++.+|+.+-+.++|||||++.+.+...+..|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~--~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc--cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 56777888999999999999 667899999999977665433 788899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEEeccccccc
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGIAKF 914 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~ 914 (1031)
+|+|+|++|..-+-.. .-+++..+.++++||+++|+|+|.+ +|||||+||+|+++-... -+|++|||+|..
T Consensus 89 Fe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999986655433 2367888999999999999999999 999999999999996433 499999999998
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
+. +......++||++|||||+++..+|+..+|||+.|||+|-++.|..||-+.+. .+....+......+++
T Consensus 163 l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~--~rlye~I~~g~yd~~~------ 233 (355)
T KOG0033|consen 163 VN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYEQIKAGAYDYPS------ 233 (355)
T ss_pred eC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH--HHHHHHHhccccCCCC------
Confidence 87 55567788999999999999999999999999999999999999999654332 2222223222222222
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+.....+..+++++|+..||.+|.|+.|.++
T Consensus 234 ~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 234 PEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 112222335678899999999999999999874
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-38 Score=347.37 Aligned_cols=246 Identities=24% Similarity=0.341 Sum_probs=204.1
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
..++|...++||+|.||+|+.|.. .+++.||||++++..+-.+ .+.+..+.|-.++.... ||.+++++.+|++..++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~-d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQR-DEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceecc-ccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 457899999999999999999955 4789999999998776443 46788888988887774 99999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|.||||+.||++..+.+. +.+++..+..++..|+.||+|||++ ||||||||.+||++|.+|++||+|||+++.
T Consensus 445 ~fvmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence 999999999995555443 3589999999999999999999999 999999999999999999999999999996
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
--..+....+++||+.|||||++.+..|+.++|.|||||++|||+.|+.||...++ .+..+.+. ..+..+|..
T Consensus 518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE--ee~FdsI~----~d~~~yP~~- 590 (694)
T KOG0694|consen 518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE--EEVFDSIV----NDEVRYPRF- 590 (694)
T ss_pred cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHh----cCCCCCCCc-
Confidence 54344556789999999999999999999999999999999999999999764433 22222221 122232221
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
...+...++++++.++|++|--+
T Consensus 591 -----ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 591 -----LSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -----ccHHHHHHHHHHhccCcccccCC
Confidence 12356678889999999999865
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=343.31 Aligned_cols=254 Identities=25% Similarity=0.396 Sum_probs=215.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe-eE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH-SF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~-~~ 835 (1031)
.++|..++++|+|+||.++.++. .++..||+|.+......+ .......+|+.++++++|||||.+.+.|.+++. .+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~--~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE--PERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc--hhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence 35788899999999999999954 478899999997665433 234578899999999999999999999999888 99
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
|||+|++||++.+.+.... ...++++.+..++.||+.|++|||+. +|+|||||++|||++.++.|||+|||+|+.+
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhc
Confidence 9999999999999998765 35689999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.++.......+||+.||.||.+.+.+|..|+||||+||++|||++-+++|...+. ...+.++.......++.
T Consensus 157 ~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-----~~Li~ki~~~~~~Plp~--- 228 (426)
T KOG0589|consen 157 NPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-----SELILKINRGLYSPLPS--- 228 (426)
T ss_pred CCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-----HHHHHHHhhccCCCCCc---
Confidence 8777667788999999999999999999999999999999999999999764443 23333333333222222
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
....++..+++.|++.+|..||++.+++..
T Consensus 229 ---~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 229 ---MYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---cccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 223367778999999999999999999864
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=373.08 Aligned_cols=254 Identities=26% Similarity=0.410 Sum_probs=205.0
Q ss_pred ccCccceeecCCCccEEEEEeC--CCc----EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP--SGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
..+..+.||+|+||.||.|... ++. .||||.+++.. +.++..+|.+|..+|+.++|||||+++|+|.+.+.
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~---~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS---SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 3456778999999999999553 343 59999987754 35678899999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCc----cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAA----AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
.++++|||++|+|..|++..+. ...++..+...++.|||+|+.|||++ ++|||||.++|+|+++...|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 9999999999999999987632 24688999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC-ceee-ccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 910 GIAKFLNPHSSN-WTAF-AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 910 g~a~~~~~~~~~-~~~~-~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
|+|+.+....+. .... .-+.+|||||.++.+.++.|+|||||||++||++| |..||...... +....+.+..
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~--~v~~~~~~gg--- 921 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF--EVLLDVLEGG--- 921 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH--HHHHHHHhCC---
Confidence 999955433322 1112 23578999999999999999999999999999999 99997755442 1111111111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+++.+.. +...+.+++..||+.+|++||++..|+++++
T Consensus 922 --RL~~P~~----CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~ 959 (1025)
T KOG1095|consen 922 --RLDPPSY----CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDP 959 (1025)
T ss_pred --ccCCCCC----CChHHHHHHHHHccCChhhCccHHHHHhhhh
Confidence 2222211 1225668899999999999999999998775
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=325.89 Aligned_cols=260 Identities=22% Similarity=0.328 Sum_probs=205.4
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-----CC
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN-----AQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-----~~ 832 (1031)
..|...+.||+|+||.|++| ...+|+.||+|++... ++.....++..||+..++.++|+||+.+.+++.. -.
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~--F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP--FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh--hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 44556788999999999999 5568999999998643 4556678899999999999999999999999865 35
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
.+|+|+|+|+ .+|...++... .++...+..+++|+++||.|+|+. +|+|||+||+|++++.+...||+|||+|
T Consensus 100 DvYiV~elMe-tDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence 7899999994 59999998764 388899999999999999999999 9999999999999999999999999999
Q ss_pred cccCC--CCCCceeeccccCcccccccc-ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh--------------h
Q 043316 913 KFLNP--HSSNWTAFAGTFGYAAPEIAH-MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS--------------F 975 (1031)
Q Consensus 913 ~~~~~--~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~--------------~ 975 (1031)
+..++ ....++..+.|.+|+|||++. ...|+.+.||||.|||+.||++|+.-|.+.+..... .
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 98764 244568889999999999765 467999999999999999999999988765542100 0
Q ss_pred hhh----HHHhhhhcCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 976 SNM----ITEINQNLDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 976 ~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... ........++..+.+... .........+++.+|+..||.+|+|++|.++
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 011111222222111111 1112234678999999999999999999875
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=324.25 Aligned_cols=262 Identities=26% Similarity=0.385 Sum_probs=206.2
Q ss_pred HHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHh--cCCCCceeeeeeeEecC---
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT--EIRHRNIIKFHGFCSNA--- 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~--~l~h~niv~l~~~~~~~--- 831 (1031)
...+....+.||+|.||+||+|++ .|+.||||+|... +.+.+.||.++.+ .++|+||+.+++.-..+
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr-------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR-------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hhheeEEEEEecCccccceeeccc-cCCceEEEEeccc-------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 346778889999999999999999 7999999999653 3566777777765 55999999999987544
Q ss_pred -CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC-----CCCCeeeCCCCCCCeeeCCCCceE
Q 043316 832 -QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD-----CLPPIVHGDISSKNVLLDSEHEAH 905 (1031)
Q Consensus 832 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~k 905 (1031)
..+|+|++|.+.|||.||+.+. .++.....+++..+|.||+|||.. ..|.|.|||||.+||+|..++.+.
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 3579999999999999999875 378899999999999999999954 457899999999999999999999
Q ss_pred EeccccccccCCCCC----CceeeccccCcccccccccc------CCCccccchhhhHHHHHHHhC----------CCCC
Q 043316 906 VSDFGIAKFLNPHSS----NWTAFAGTFGYAAPEIAHMM------RATEKYDVHSFGVLALEVIKG----------NHPR 965 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltG----------~~P~ 965 (1031)
|+|+|+|........ .....+||.+|||||++... +.-..+||||||.|+||+.-. +.||
T Consensus 357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 999999998765432 23567899999999998542 113468999999999999852 4676
Q ss_pred CCcCccchhhhhhHHHh-hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 966 DYVSTNFSSFSNMITEI-NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 966 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
-+.-+....+.++.+-+ .....+.++.. -...+.+..+.++++.||..+|..|-|+-.+.+.|.|
T Consensus 437 yd~Vp~DPs~eeMrkVVCv~~~RP~ipnr-W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~ 502 (513)
T KOG2052|consen 437 YDVVPSDPSFEEMRKVVCVQKLRPNIPNR-WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAK 502 (513)
T ss_pred ccCCCCCCCHHHHhcceeecccCCCCCcc-cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHH
Confidence 66655555555554321 22233333321 1223556788999999999999999999998888754
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=347.38 Aligned_cols=244 Identities=22% Similarity=0.290 Sum_probs=198.0
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccC
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDR 843 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 843 (1031)
+.||+|+||.||+|+. .+|+.||+|+++..... .......+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVII-AKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999954 57899999999764322 223456788999999999999999999999999999999999999
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCce
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 923 (1031)
|+|.+++.... .+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 80 GELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 99999987643 478899999999999999999999 999999999999999999999999999986433333345
Q ss_pred eeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHH
Q 043316 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003 (1031)
Q Consensus 924 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1031)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ... ...+.. ....++. ....+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~---~~~~~~-~~~~~p~------~~~~~ 221 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKL---FELILM-EEIRFPR------TLSPE 221 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--HHH---HHHHHc-CCCCCCC------CCCHH
Confidence 56799999999999998999999999999999999999999854322 111 111111 1111111 11235
Q ss_pred HHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 1004 IMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 1004 l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
+.+++.+||+.||++|| ++.|+++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 77899999999999999 7888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=341.42 Aligned_cols=262 Identities=21% Similarity=0.335 Sum_probs=200.1
Q ss_pred hccCccceeecCCCccEEEEEeC-----------------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCce
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-----------------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni 821 (1031)
++|.+.++||+|+||.||+|... ++..||+|++..... ......|.+|++++.+++||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN---KNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC---HHHHHHHHHHHHHHhhcCCCCe
Confidence 56888999999999999999643 234799999865421 2245678999999999999999
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhhcccCC----------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDA----------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 885 (1031)
+++++++.+.+..++||||+++|+|.+++.... ....+++.++.+++.||+.||+|||+. |
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ 158 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---N 158 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---C
Confidence 999999999999999999999999999985432 112467889999999999999999999 9
Q ss_pred eeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh--C
Q 043316 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK--G 961 (1031)
Q Consensus 886 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt--G 961 (1031)
|+||||||+||+++.++.+||+|||+++........ .....++..|+|||++.++.++.++|||||||++|||++ |
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 999999999999999999999999999865433221 122345788999999988889999999999999999997 4
Q ss_pred CCCCCCcCccchhhhhhHHH-hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 962 NHPRDYVSTNFSSFSNMITE-INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 962 ~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..||...... ........ ............+ ......+.+++.+||+.||++|||+.||.+.|++
T Consensus 239 ~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 239 EQPYGELTDE--QVIENAGEFFRDQGRQVYLFRP---PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCcCCHH--HHHHHHHHHhhhccccccccCC---CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 5666543321 11111111 1110000000000 0112367889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=323.42 Aligned_cols=264 Identities=21% Similarity=0.294 Sum_probs=205.7
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc-eeeeeeeEecCC---
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN-IIKFHGFCSNAQ--- 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~l~~~~~~~~--- 832 (1031)
...|...++||+|+||+||+|+ ..+|+.||+|++.-... ++.......+|+.++++++|+| ||++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~--~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFE--EEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEecccc--ccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence 4557777889999999999994 56799999999976532 1223456789999999999999 999999998776
Q ss_pred ---eeEEEEEeccCCCchhhcccCCcc-ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 833 ---HSFIVSEYLDRGSLTTILKDDAAA-KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 833 ---~~~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
..++|+||++. +|.+++...... ..++...+..+++||++|++|||++ +|+||||||+||+++++|.+||+|
T Consensus 88 ~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 88 GIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred ccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeec
Confidence 88999999965 999999876532 2355678999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh---
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ--- 984 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~--- 984 (1031)
||+|+.+.-+...++..++|.+|+|||++.+. .|+...||||+|||++||++++.-|....+.. ...........
T Consensus 164 FGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 164 FGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNE 242 (323)
T ss_pred cchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCc
Confidence 99999877666667888999999999999886 68999999999999999999998877555421 11111100000
Q ss_pred ----------hcCCCCCCC--ChhHHHH----HHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 985 ----------NLDHRLPTP--SRDVMDK----LMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 985 ----------~~~~~~~~~--~~~~~~~----~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.....++.. +...... .....+++.+|++.+|.+|.|++++++.
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000011111 1111111 1357889999999999999999998863
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=308.20 Aligned_cols=260 Identities=22% Similarity=0.321 Sum_probs=205.6
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA----- 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 831 (1031)
.++|.+.+.+|+|||+-||.++ ..+++.||+|++.... .++.+..++|++..++++||||++++++...+
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 4689999999999999999995 5689999999997764 34678899999999999999999999987443
Q ss_pred CeeEEEEEeccCCCchhhcccCCcc-ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAA-KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
...|++++|...|+|.+.++..... ..+++.++..|+.+|++||++||+. .+.++||||||.||++.+.+.+++.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 3589999999999999999765433 3689999999999999999999998 2359999999999999999999999999
Q ss_pred cccccCCCCCC---------ceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhh
Q 043316 911 IAKFLNPHSSN---------WTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978 (1031)
Q Consensus 911 ~a~~~~~~~~~---------~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~ 978 (1031)
.++...-.-.. ......|..|+|||.+. +...++++|||||||++|+|+.|..||+..-..-....-.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA 254 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA 254 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe
Confidence 99865322111 12234689999999875 3456889999999999999999999987543321111111
Q ss_pred HHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.... ..++.... ....+.+++++|++.||.+||++.|++..++
T Consensus 255 v~n~q----~s~P~~~~----yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 255 VQNAQ----ISIPNSSR----YSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred eeccc----cccCCCCC----ccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 11100 11111111 3346788999999999999999999998875
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=337.44 Aligned_cols=248 Identities=21% Similarity=0.293 Sum_probs=198.4
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----CCeeEEEEE
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----AQHSFIVSE 839 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~~~lv~e 839 (1031)
...+|+|++|.||+|.. +|+.||||+++.... ......+.|.+|+.++++++||||++++|++.+ ....++|||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEecccccc-ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 36799999999999987 799999999976432 122225778899999999999999999999876 356899999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++|+|.++++... .+++.....++.|++.|++|||+.. +++||||||+||+++.++.+||+|||+++......
T Consensus 103 y~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 103 YCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred eCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 999999999997643 5788999999999999999999742 78899999999999999999999999998654322
Q ss_pred CCceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 920 SNWTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||+..... .....+. ........+.
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--~~~~~i~--~~~~~~~~~~----- 245 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--EIYDLII--NKNNSLKLPL----- 245 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--HHHHHHH--hcCCCCCCCC-----
Confidence 23467899999999876 67899999999999999999999998754321 1111111 1111111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||+.||++|||++|+++.|++
T Consensus 246 -~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~ 278 (283)
T PHA02988 246 -DCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL 278 (283)
T ss_pred -cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence 123367889999999999999999999999864
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=320.45 Aligned_cols=248 Identities=26% Similarity=0.414 Sum_probs=215.7
Q ss_pred cCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|.+..+||+|+||.||+| +..+|+.+|+|++... .+.+++.+|+.++++++.|+||++||.+.....+|+|||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc------chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 556778999999999999 5668999999998764 368899999999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
||..|+..+.++-.. +++++.++..+++.-+.||+|||.. .-+|||||+.||+++.+|.+|++|||.|-.+...-
T Consensus 109 YCGAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 109 YCGAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred hcCCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 999999999998653 5799999999999999999999999 88999999999999999999999999998765443
Q ss_pred CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
.......||+.|||||++..-.|..++||||+|+...||..|++||.+...... .-.++...++..+....
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA---------IFMIPT~PPPTF~KPE~ 254 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA---------IFMIPTKPPPTFKKPEE 254 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce---------eEeccCCCCCCCCChHh
Confidence 445677899999999999988899999999999999999999999876655211 12344555555555666
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 1000 KLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
...++-+++++|+.+.|++|.|+.++++.
T Consensus 255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 255 WSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 67789999999999999999999998763
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=325.69 Aligned_cols=254 Identities=23% Similarity=0.285 Sum_probs=193.6
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--C---e
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--Q---H 833 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~---~ 833 (1031)
.|...+++|.|+||.||+|.. .+++.||||++-.+.... -+|+++|++++|||||++..+|... . .
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k--------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK--------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC--------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 477788999999999999954 467999999986543222 3899999999999999999988542 2 3
Q ss_pred eEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEecccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGI 911 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~ 911 (1031)
..+|||||+. +|.+.++... ...+++...+.-+..||++||+|||+. ||+||||||+|+|+|.+ |.+||||||.
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCc
Confidence 4589999985 8988887531 123567778889999999999999998 99999999999999976 8999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH--------HHh
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI--------TEI 982 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~--------~~~ 982 (1031)
|+.+.+.... .....|..|+|||.+.| ..|+.+.||||.|||+.||+-|++-|.+.+... .....+ +.+
T Consensus 173 AK~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~d-QL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 173 AKVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVD-QLVEIIKVLGTPTREDI 250 (364)
T ss_pred ceeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 9998765444 56678999999999887 469999999999999999999999987654421 111111 111
Q ss_pred hh-------hcCCCCCCCC--h-hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 NQ-------NLDHRLPTPS--R-DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ~~-------~~~~~~~~~~--~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ...+.+.... + .......+..+++.++++++|.+|.++.|++.
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11 1111111111 0 11112346789999999999999999999875
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=335.39 Aligned_cols=253 Identities=20% Similarity=0.277 Sum_probs=201.1
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|+..+.||+|+||.||+|.. .+++.||||++....... ......+.+|+.++++++|++|+++++++.+++..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-RKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh-hhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 67788999999999999954 679999999987654322 2234567899999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG- 155 (285)
T ss_pred ecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-
Confidence 999999998886432 23578899999999999999999999 9999999999999999999999999999875432
Q ss_pred CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||........ ......... .....++. +
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~-~~~~~~~~------~ 227 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEVDRRVK-EDQEEYSE------K 227 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHHHHHhh-cccccCCc------c
Confidence 223445789999999999998999999999999999999999999875433211 011111111 11111111 1
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 1000 KLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
....+.+++.+||+.||++||+ ++|+++
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 1235778999999999999997 788765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=340.91 Aligned_cols=247 Identities=24% Similarity=0.311 Sum_probs=201.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|++...... +....+.+.+|++++++++||||+++++++.++...++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-RLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence 3688899999999999999965 47899999998654321 223456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.++++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 80 MEYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999997643 478899999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+... ...++..
T Consensus 154 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--~~~~~~i~~~----~~~~~~~---- 220 (291)
T cd05612 154 R---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--FGIYEKILAG----KLEFPRH---- 220 (291)
T ss_pred C---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC----CcCCCcc----
Confidence 2 2345689999999999988899999999999999999999999864432 1111111111 1111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
....+.+++++||+.||.+||+ ++|+++
T Consensus 221 --~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 221 --LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred --CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 1235778999999999999995 888764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=350.58 Aligned_cols=257 Identities=22% Similarity=0.376 Sum_probs=202.5
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~ 831 (1031)
++|++.+.||+|+||.||+|.. .++..||||+++.... ....+.+.+|+.+++.+ +||||+++++++.++
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC---cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 5688999999999999999953 2466899999865432 23456788999999999 899999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc--------------------------------------------------------
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA-------------------------------------------------------- 855 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 855 (1031)
+..++||||+++|+|.++++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 999999999999999999864321
Q ss_pred ----------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 856 ----------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 856 ----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 12467889999999999999999999 99999999999999999999999999998664322
Q ss_pred CC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 920 SN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 920 ~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. .....++..|+|||++.+..++.++|||||||++|||++ |..||....... ..... +........+..
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~---~~~~~~~~~~~~--- 341 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKM---IKEGYRMLSPEC--- 341 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHH---HHhCccCCCCCC---
Confidence 21 112334668999999999899999999999999999998 888876543211 11111 111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...++.+++.+||+.||++|||+.||++.|++
T Consensus 342 ---~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 342 ---APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 12367889999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=373.86 Aligned_cols=488 Identities=29% Similarity=0.308 Sum_probs=324.4
Q ss_pred CcccEEecCCCcCcCCCc-cccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 101 PHLMYLNLSCNVLYGNIP-PQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
.+++.|+++.|.+- ..| +.+...-+|+.||+++|+++ ..|..|..+.+|+.|+++.|.+. ++|.+++++.+|++|.
T Consensus 21 ~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~ln 97 (1081)
T KOG0618|consen 21 EALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLN 97 (1081)
T ss_pred HHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhhe
Confidence 34666666666654 222 22334445777777777665 66667777777777777777666 6666677777777777
Q ss_pred ccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCC
Q 043316 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 180 L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
|.+|.+. .+|.++..+++|++|+++.|++. .+|..+..++.++.++.++|.....++ ... ++.++|..|.+.+
T Consensus 98 L~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg----~~~-ik~~~l~~n~l~~ 170 (1081)
T KOG0618|consen 98 LKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLG----QTS-IKKLDLRLNVLGG 170 (1081)
T ss_pred eccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhc----ccc-chhhhhhhhhccc
Confidence 7777666 66777777777777777777664 666666666777777777662221222 222 5666666666666
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccc
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 339 (1031)
.++..+..++. .|||++|.+. -..+.++.+|+.|....|+++... -..++|+.|+.++|.++...+.. .
T Consensus 171 ~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~p--~ 239 (1081)
T KOG0618|consen 171 SFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVHP--V 239 (1081)
T ss_pred chhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecccc--c
Confidence 66666665555 5666666664 124555666666666666665211 12345666666666666322211 1
Q ss_pred cccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccccee
Q 043316 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLR 419 (1031)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 419 (1031)
-.+|++++++.|++++. |++++.+.+|+.++..+|+++ .+|..+...++|+.|.+..|.+..+ |....+++.|++|+
T Consensus 240 p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yi-p~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYI-PPFLEGLKSLRTLD 316 (1081)
T ss_pred cccceeeecchhhhhcc-hHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhC-CCcccccceeeeee
Confidence 24566666666666644 466666666666666666664 5566666666666666666666554 33445566677777
Q ss_pred ccccccccccccccCCCCC-CCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCccc
Q 043316 420 FNQNNLFGKVYEAFGDHPN-LTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIV 498 (1031)
Q Consensus 420 L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 498 (1031)
|..|++...+...|..... |..|+.+.|++...+...-..++.|+.|.+.+|.+++..-+.+.++.+|+.|+|++|+|.
T Consensus 317 L~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~ 396 (1081)
T KOG0618|consen 317 LQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN 396 (1081)
T ss_pred ehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc
Confidence 7777766666555555444 677777777777666555566777888888888888877777888888888888888888
Q ss_pred CCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhc
Q 043316 499 GKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578 (1031)
Q Consensus 499 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 578 (1031)
......+.++..|+.|+|++|+++ .+|..+..++.|+.|...+|+|. ..| .+..++.|+.+|+|.|+|+...-..-.
T Consensus 397 ~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~ 473 (1081)
T KOG0618|consen 397 SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL 473 (1081)
T ss_pred cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhC
Confidence 666667788888888888888888 77888888888888888888887 677 788888888999998888765333333
Q ss_pred cccccCceeccCcccCCcCCccccCcccchhhhcCCC
Q 043316 579 KLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHN 615 (1031)
Q Consensus 579 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 615 (1031)
..++|++|||++|.-....-..|..+..+...+++-|
T Consensus 474 p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 474 PSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred CCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 3378999999998744345556666677777777666
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=344.55 Aligned_cols=248 Identities=23% Similarity=0.293 Sum_probs=201.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||++...... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL-KMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 36789999999999999999965 46899999999765422 22345678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 96 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred EEcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 999999999999997643 478889999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. .....|++.|+|||++.+..++.++||||+||++|||++|+.||..... . .....+... ...++..
T Consensus 170 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~---~~~~~i~~~-~~~~p~~--- 237 (329)
T PTZ00263 170 DR---TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--F---RIYEKILAG-RLKFPNW--- 237 (329)
T ss_pred CC---cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--H---HHHHHHhcC-CcCCCCC---
Confidence 32 2345789999999999998899999999999999999999999864332 1 111111111 1111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
....+.+++.+||+.||.+||+ ++|+++
T Consensus 238 ---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 238 ---FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1125678999999999999997 677763
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=349.59 Aligned_cols=257 Identities=23% Similarity=0.398 Sum_probs=201.9
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~ 831 (1031)
++|++.+.||+|+||.||+|.. .++..||||+++.... ....+.+.+|+.+++.+ +||||+++++++.+.
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH---TDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC---HHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 5789999999999999999853 2345899999976432 12356788999999999 899999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCC---------------------------------------------------------
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDA--------------------------------------------------------- 854 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------------------------- 854 (1031)
+..++||||+++|+|.++++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 99999999999999999885421
Q ss_pred ----------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC--c
Q 043316 855 ----------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--W 922 (1031)
Q Consensus 855 ----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~ 922 (1031)
...++++.++++++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++........ .
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence 012477889999999999999999999 9999999999999999999999999999865432211 1
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL 1001 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1031)
....++..|+|||++.+..++.++||||+||++|||++ |+.||....... ....... .......+.. ..
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~---~~~~~~~~~~------~~ 341 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVK---RGYQMSRPDF------AP 341 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHH---cccCccCCCC------CC
Confidence 12234568999999988899999999999999999997 999986543321 1111111 1111111111 12
Q ss_pred HHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 1002 MSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 1002 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.++.+++.+||+.||++|||+.||++.|++
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 367889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=341.68 Aligned_cols=245 Identities=24% Similarity=0.338 Sum_probs=198.2
Q ss_pred ceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEe
Q 043316 765 YCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
+.||+|+||.||+|+. .+++.||||+++......+......+.+|+.+++.++||||+++++++.+++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999964 357899999997755434444556788999999999999999999999999999999999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
+++++|.+++.... .+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999987643 467788999999999999999999 999999999999999999999999999875433333
Q ss_pred CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHH
Q 043316 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000 (1031)
Q Consensus 921 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1031)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+... ...++.. .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~~~~-~~~~~~~------~ 223 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKILKG-KLNLPPY------L 223 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcC-CCCCCCC------C
Confidence 334467899999999999888999999999999999999999998654321 111111111 1111111 1
Q ss_pred HHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 1001 LMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 1001 ~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
...+.+++.+|++.||++|| +++++++
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 23567899999999999999 7888765
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=341.26 Aligned_cols=242 Identities=24% Similarity=0.316 Sum_probs=194.8
Q ss_pred eecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCC
Q 043316 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 845 (1031)
||+|+||.||+|+. .+++.||+|++++.... .......+.+|+.++++++||||+++++++.+++..++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV-SRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 69999999999965 46889999998764321 22345678899999999999999999999999999999999999999
Q ss_pred chhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceee
Q 043316 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925 (1031)
Q Consensus 846 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 925 (1031)
|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 153 (312)
T cd05585 80 LFHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTF 153 (312)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccc
Confidence 999997643 478899999999999999999999 99999999999999999999999999998653333334456
Q ss_pred ccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHH
Q 043316 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005 (1031)
Q Consensus 926 ~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1005 (1031)
.||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+.. ....++.. ....+.
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~--~---~~~~~~~-~~~~~~~~------~~~~~~ 221 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN--E---MYRKILQ-EPLRFPDG------FDRDAK 221 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH--H---HHHHHHc-CCCCCCCc------CCHHHH
Confidence 7899999999999989999999999999999999999998643321 1 1111111 11111111 123567
Q ss_pred HHHHhhccCCCCCCCC---HHHHHH
Q 043316 1006 EVAILCLVESPEARPT---MKKVCN 1027 (1031)
Q Consensus 1006 ~li~~cl~~dP~~Rps---~~evl~ 1027 (1031)
+++.+||+.||++||+ +.|++.
T Consensus 222 ~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 8899999999999985 556543
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=344.24 Aligned_cols=256 Identities=20% Similarity=0.285 Sum_probs=204.9
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+.. +++.||||+++..... .......+.+|+.++..++||||+++++++.+++..|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF-KLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence 36889999999999999999654 6899999999765422 223456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 80 MEYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999997543 478899999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+......... +......
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~--~~~~~~~ 226 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN--ETWENLKYWKETLQR--PVYDDPR 226 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH--HHHHHHHhccccccC--CCCCccc
Confidence 234567899999999999989999999999999999999999998654321 111111111111110 1110000
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.....++.+++.+|++.+|.+||+++|+++.
T Consensus 227 ~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 227 FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1123467789999999999999999999853
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=339.15 Aligned_cols=260 Identities=18% Similarity=0.269 Sum_probs=199.4
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+.. +++.||||++..... ......+.+|+.+++.++||||+++++++.++...++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE---EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc---cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 67999999999999999999654 789999999875431 22345678899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++ +++.+++.... ..++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 82 FEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 99996 57877776542 3478889999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh-----------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN----------- 985 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~----------- 985 (1031)
.........+++.|+|||++.+ ..++.++||||+||++|||++|+.||....................
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence 3333345678999999999865 4578899999999999999999999876543211111111100000
Q ss_pred ---cCCCCCC-CChhHHH------HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 ---LDHRLPT-PSRDVMD------KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ---~~~~~~~-~~~~~~~------~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....... .+....+ ....+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000 0000011 1135678999999999999999999975
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=341.42 Aligned_cols=244 Identities=23% Similarity=0.313 Sum_probs=197.7
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccC
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDR 843 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 843 (1031)
+.||+|+||.||+|+. .+++.||||++.+.... .......+.+|+.+++.++||||+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVII-AKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999954 57899999999765422 223466788999999999999999999999999999999999999
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCce
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 923 (1031)
|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 80 g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 80 GELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 99998887543 478899999999999999999999 999999999999999999999999999886433333334
Q ss_pred eeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHH
Q 043316 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003 (1031)
Q Consensus 924 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1031)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+.. ....++.. ....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--~---~~~~~~~-~~~~~p~~------~~~~ 221 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--K---LFELILM-EDIKFPRT------LSAD 221 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--H---HHHHhcc-CCccCCCC------CCHH
Confidence 567899999999999888999999999999999999999998643321 1 1111111 11111111 1235
Q ss_pred HHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 1004 IMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 1004 l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
+.+++.+||++||++|| ++.|+++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 222 AKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 67889999999999997 8898875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=335.67 Aligned_cols=259 Identities=17% Similarity=0.237 Sum_probs=198.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.++||+|+||.||+|.. .+++.||+|+++.... ......+.+|+.++++++||||+++++++.+++..++|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc---CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 5689999999999999999954 4789999999865431 22345678999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++ +|.+++.... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 82 FEYLDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred EeCCCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 999975 8988886543 2468889999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh--------------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI-------------- 982 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~-------------- 982 (1031)
.........+++.|+|||++.+ ..++.++||||+||++|||+||+.||....... .........
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 156 PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred CCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhccccc
Confidence 3333345577999999998865 468999999999999999999999986443211 110000000
Q ss_pred ---hhhcCCCCCCCCh--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 ---NQNLDHRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ---~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+....... .......+..+++.+|++.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000000 00011235678999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=341.23 Aligned_cols=244 Identities=23% Similarity=0.290 Sum_probs=197.1
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccC
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDR 843 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 843 (1031)
+.||+|+||.||+|+. .+|+.||+|+++..... .......+.+|+.++++++||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 3699999999999954 57899999999765422 223456778999999999999999999999999999999999999
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCce
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 923 (1031)
|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++...........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 80 GELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 99998887543 478899999999999999999999 999999999999999999999999999876433333334
Q ss_pred eeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHH
Q 043316 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003 (1031)
Q Consensus 924 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1031)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+.. ....++.. ....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~---~~~~~~-~~~~~p~~------~~~~ 221 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RL---FELILM-EEIRFPRT------LSPE 221 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--HH---HHHHhc-CCCCCCCC------CCHH
Confidence 567899999999999889999999999999999999999998643321 11 111110 11111111 1235
Q ss_pred HHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 1004 IMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 1004 l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
+.+++.+||+.||++|| ++.++++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 222 AKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 67889999999999998 8888764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=343.75 Aligned_cols=248 Identities=23% Similarity=0.387 Sum_probs=195.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|+..++||+|+||.||+|.. .+++.||||++.... .....+.+.+|+++++.++|+||+++++++.+++..++|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 4567788999999999999965 478999999986532 223456789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+.. ...+..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 151 ~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 151 LEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred EecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 9999999986532 235577889999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.........|+..|+|||++.. ...+.++|||||||++|||++|+.||..... ..+...............+.
T Consensus 221 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 298 (353)
T PLN00034 221 TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDWASLMCAICMSQPPEAPA 298 (353)
T ss_pred ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhccCCCCCCC
Confidence 3333345678999999998743 2345689999999999999999999873322 11222222211111111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++.+++.+||+.||++|||+.|+++
T Consensus 299 ------~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 299 ------TASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred ------ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12236788999999999999999999986
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=328.30 Aligned_cols=254 Identities=22% Similarity=0.378 Sum_probs=202.4
Q ss_pred hccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.+|++.+.||+|+||.||+|.+. .+..||+|+++.... ......+.+|+.++++++||||+++++++..++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS---DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 56888999999999999999642 467899999876432 22356789999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++|+|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 99999999999999997643 3588999999999999999999999 999999999999999999999999998765
Q ss_pred cCCCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 915 LNPHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 915 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
...... ......++..|+|||.+.+..++.++||||+||++||+++ |+.||...... .....+........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 231 (266)
T cd05064 157 DKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-----DVIKAVEDGFRLPAPR 231 (266)
T ss_pred ccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHCCCCCCCCC
Confidence 422111 1112334678999999998899999999999999999875 99998654321 1112221111111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||+.+|++||+++||.+.|++
T Consensus 232 ------~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 232 ------NCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred ------CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 122357788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=338.63 Aligned_cols=200 Identities=29% Similarity=0.395 Sum_probs=175.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .++..||+|++.... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 6799999999999999999965 468899999986542 123456789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 82 MEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred eecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999997643 4788999999999999999999852 699999999999999999999999999986533
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCc
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYV 968 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~ 968 (1031)
. ......|+..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred c--ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 2 223456899999999999889999999999999999999999998643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=341.00 Aligned_cols=254 Identities=23% Similarity=0.304 Sum_probs=200.8
Q ss_pred ccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
+|++.+.||+|+||.||+|+. .+++.||+|++.+..........+.+.+|+.+++.++ ||+|+++++++.+++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999964 3688999999976544333445667889999999995 99999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999987543 478899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 915 LNPHSS-NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 915 ~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
...... ......||..|+|||++.+. .++.++||||+||++|||+||+.||........ .......+. .....++.
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~-~~~~~~~~ 232 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRIL-KCDPPFPS 232 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHh-cCCCCCCC
Confidence 533222 23346789999999998865 478899999999999999999999864332111 111111111 11122221
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
. ....+.+++.+||+.||++|| +++|+++
T Consensus 233 ~------~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 233 F------IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred C------CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1 123567889999999999999 6777764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=341.00 Aligned_cols=248 Identities=21% Similarity=0.268 Sum_probs=201.4
Q ss_pred HhccCccceeecCCCccEEEEEeC-C-CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-S-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
.++|.+.+.||+|+||.||+|... + +..||+|++...... .....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII-KQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 357999999999999999999643 3 368999998764422 2234567889999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++...
T Consensus 108 lv~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 9999999999999997653 478899999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+.... ..++..
T Consensus 182 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~---~~~i~~~~-~~~p~~-- 250 (340)
T PTZ00426 182 DTR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LI---YQKILEGI-IYFPKF-- 250 (340)
T ss_pred CCC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HH---HHHHhcCC-CCCCCC--
Confidence 432 23467899999999999888999999999999999999999998644321 11 11111111 111211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
. ...+.+++.+|++.||++|+ +++|+++
T Consensus 251 -~---~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 251 -L---DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred -C---CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 1 12467889999999999995 8988875
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=339.20 Aligned_cols=250 Identities=23% Similarity=0.324 Sum_probs=196.5
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|+. .+++.||||++++.... +....+.+.+|..++.++ +||||+++++++.+....|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN-DDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 3699999999999955 57899999999765432 223456788999999888 69999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|.+++... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (329)
T cd05588 80 GGDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT 153 (329)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence 99999888654 3588999999999999999999999 99999999999999999999999999997533333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc---hhhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF---SSFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
....||+.|+|||++.+..++.++||||+||++|||++|+.||+...... .................++..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------ 227 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS------ 227 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCC------
Confidence 45678999999999999899999999999999999999999986432211 001111111111111122211
Q ss_pred HHHHHHHHHHhhccCCCCCCCC------HHHHHH
Q 043316 1000 KLMSIMEVAILCLVESPEARPT------MKKVCN 1027 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps------~~evl~ 1027 (1031)
...++.+++.+|++.||.+||+ ++|+++
T Consensus 228 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 228 LSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 1235678899999999999997 567653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=316.08 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=207.6
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|+..+.||.|.-|+||.|+.. ++..+|+|++.+..... .....+...|-+|++.++||.++++|+.++.+...|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~-rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS-RKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh-hhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 45677788999999999999765 46899999998877644 33466778899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||||+||+|....+.+. .+.+++..++.++.+++-||+|||-. |||+|||||+||||.++|++.|+||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999998887654 57799999999999999999999999 999999999999999999999999999853310
Q ss_pred ---------------------------------C-C----------------------CCceeeccccCccccccccccC
Q 043316 918 ---------------------------------H-S----------------------SNWTAFAGTFGYAAPEIAHMMR 941 (1031)
Q Consensus 918 ---------------------------------~-~----------------------~~~~~~~gt~~y~aPE~~~~~~ 941 (1031)
. . .....++||-.|.|||++.|..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 0012357999999999999999
Q ss_pred CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCC
Q 043316 942 ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021 (1031)
Q Consensus 942 ~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 1021 (1031)
.+.++|.|+|||++|||+.|+.||...... ..+.+.+. .+.+++..+ .......++|++.|.+||.+|.-
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~-~Tl~NIv~-----~~l~Fp~~~----~vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNK-ETLRNIVG-----QPLKFPEEP----EVSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCch-hhHHHHhc-----CCCcCCCCC----cchhHHHHHHHHHhccChhhhhc
Confidence 999999999999999999999998766542 22222211 123333322 23346789999999999999997
Q ss_pred ----HHHHHH
Q 043316 1022 ----MKKVCN 1027 (1031)
Q Consensus 1022 ----~~evl~ 1027 (1031)
+.||.+
T Consensus 382 ~~rGA~eIK~ 391 (459)
T KOG0610|consen 382 SKRGAAEIKR 391 (459)
T ss_pred cccchHHhhc
Confidence 777764
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=333.17 Aligned_cols=259 Identities=21% Similarity=0.276 Sum_probs=200.8
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE--NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc--cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEE
Confidence 36889999999999999999664 688999999876432 223456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++++.+..+.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 79 FEYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred EecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9999988776554432 3478899999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh-----------
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN----------- 985 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~----------- 985 (1031)
... ......|++.|+|||++.+..++.++||||+||++|||++|+.||....... .... +......
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 153 GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFT-IQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred cccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHhhCCCCHHHHHhhhc
Confidence 222 2234578999999999998889999999999999999999999987543211 1100 0000000
Q ss_pred ---c-CCCCCCC--ChhH-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 ---L-DHRLPTP--SRDV-----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ---~-~~~~~~~--~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ....+.. .... ......+.+++.+|++.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 0000000 0000 011235889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=338.23 Aligned_cols=245 Identities=24% Similarity=0.332 Sum_probs=192.4
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|.. .+++.||+|++++.... +....+.+.+|+.++.++ +||||+++++++.+++..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence 3699999999999965 56889999999765422 223456678898888776 79999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|..++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~ 153 (329)
T cd05618 80 GGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 153 (329)
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence 999998886543 478899999999999999999999 99999999999999999999999999997643333333
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch---hhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS---SFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ................++..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~------ 227 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS------ 227 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCC------
Confidence 456789999999999998999999999999999999999999864322111 00111111111111122211
Q ss_pred HHHHHHHHHHhhccCCCCCCCCH
Q 043316 1000 KLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
....+.+++.+||+.||++||++
T Consensus 228 ~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 228 LSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCHHHHHHHHHHhcCCHHHcCCC
Confidence 12356788999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-36 Score=328.51 Aligned_cols=256 Identities=25% Similarity=0.383 Sum_probs=204.5
Q ss_pred hccCccceeecCCCccEEEEEeCC------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|++.+.||+|+||.||+|.... ...||+|.++... .....+.+.+|+..+++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA---EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC---CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 578889999999999999996532 2579999986543 2234567899999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCcc-------------ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAA-------------KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~-------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
..+++|||+++++|.+++...... ..+++.+++.++.|++.|++|||+. +++||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVG 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEc
Confidence 999999999999999999754211 3478889999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhh
Q 043316 900 SEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~ 976 (1031)
.++.++|+|||++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~----- 233 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ----- 233 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-----
Confidence 999999999999986533221 1233456788999999988889999999999999999998 99997644321
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+........+ .....++.+++++||+.||++||+++||++.|++
T Consensus 234 ~~~~~i~~~~~~~~~------~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 234 EVIEMIRSRQLLPCP------EDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHcCCcCCCc------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111112111111111 1223478899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=339.76 Aligned_cols=244 Identities=22% Similarity=0.283 Sum_probs=196.8
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccC
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDR 843 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 843 (1031)
+.||+|+||.||+|.. .+++.||+|+++..... .......+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999954 57899999999765422 223456778899999999999999999999999999999999999
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
|+|.+++.... .+++.++..++.||+.||+|||+ . ||+||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (325)
T cd05594 80 GELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 153 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence 99999887543 47889999999999999999997 6 99999999999999999999999999987643333333
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....||+.|+|||++.+..++.++||||+||++|||+||+.||...... ... ..+. .....++.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~---~~i~-~~~~~~p~~------~~~ 221 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLF---ELIL-MEEIRFPRT------LSP 221 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHH---HHHh-cCCCCCCCC------CCH
Confidence 4567899999999999889999999999999999999999998643321 111 1111 111111111 123
Q ss_pred HHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 1003 SIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
++.+++.+|++.||++|+ +++|+++
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 577889999999999996 8998875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=324.04 Aligned_cols=251 Identities=24% Similarity=0.457 Sum_probs=202.9
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|+..++..+|+|.+.... ...+++.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 4688889999999999999988888899999876432 23567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05114 79 EFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD 153 (256)
T ss_pred EcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence 9999999999987543 3578899999999999999999999 9999999999999999999999999999865322
Q ss_pred CCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
... .....++..|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+........+..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~--- 225 (256)
T cd05114 154 EYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-----EVVEMISRGFRLYRPKL--- 225 (256)
T ss_pred ceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCCCCCCCC---
Confidence 211 122345668999999988889999999999999999999 89997644321 11111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.+|++||+++|+++.|.
T Consensus 226 ---~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 226 ---ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ---CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1236789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=325.75 Aligned_cols=253 Identities=21% Similarity=0.396 Sum_probs=205.6
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.++||+|++|.||+|...++..||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 6789999999999999999988788899999976532 23568899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.++++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 81 EYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred ecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999999997643 24578889999999999999999999 9999999999999999999999999999876432
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......++..|+|||++.++.++.++||||+||++|+|+| |+.||...... ............ +.. .
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~--~~~-~- 227 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-----DVMSALQRGYRM--PRM-E- 227 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-----HHHHHHHcCCCC--CCC-C-
Confidence 21 1122345678999999988889999999999999999998 99997643321 111111111111 111 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....++.+++.+|++.+|++||+++++.+.|++
T Consensus 228 --~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 228 --NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 112357789999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=327.48 Aligned_cols=261 Identities=22% Similarity=0.302 Sum_probs=208.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+. .+++.||||.+..... .+....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc-CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 5788999999999999999954 4789999998765322 1233456789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 838 SEYLDRGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
+||+++++|.+++..... ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.++|+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 999999999988864321 23478889999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........++..|+|||.+.+..++.++||||+|+++|||++|+.||........... ..+..... ++..
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~---~~~~~~~~---~~~~-- 229 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC---QKIEQCDY---PPLP-- 229 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHH---HHHhcCCC---CCCC--
Confidence 433333345688899999999888899999999999999999999999754332211111 11111111 1111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.......+.+++.+||+.+|++||++.||++.+++
T Consensus 230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 11223467889999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=349.39 Aligned_cols=252 Identities=20% Similarity=0.285 Sum_probs=203.0
Q ss_pred hccCccceeecCCCccEEEEEeCCC-cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeee-Eec-----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSG-IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGF-CSN----- 830 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~-~~~----- 830 (1031)
.++++.++|.+|||+.||.|....+ ..||+|++-.. ++.......+||++|++|+ |||||.++|. ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~----de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN----DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC----CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 5678889999999999999976555 99999998553 3567888999999999997 9999999993 211
Q ss_pred -CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 831 -AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 831 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
..++++.||||.||.|-|++..... ..+++.++++|+.|+++|+++||.. .++|||||||-+|||++.+|+.|||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq-~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQ-TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHh-ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcc
Confidence 2467899999999999999986543 3499999999999999999999986 567999999999999999999999999
Q ss_pred ccccccCCCCCCc---------eeeccccCccccccc---cccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhh
Q 043316 910 GIAKFLNPHSSNW---------TAFAGTFGYAAPEIA---HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 910 g~a~~~~~~~~~~---------~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~ 977 (1031)
|.|.......... -...-|+.|+|||++ .+..+++|+|||+|||+||-|+....||+.....
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l------ 264 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL------ 264 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce------
Confidence 9998543322110 113458999999986 5678899999999999999999999999866431
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.+...+..+.. ......+.+||+.||+.||.+||++.+|+..+.
T Consensus 265 ------aIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 265 ------AILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred ------eEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 111222222111 234557889999999999999999999998764
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=336.25 Aligned_cols=247 Identities=24% Similarity=0.341 Sum_probs=195.2
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHH---hcCCCCceeeeeeeEecCCeeEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL---TEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l---~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
|++.+.||+|+||.||+|.. .+++.||||++++..... ....+.+.+|+.++ +.++||||+++++++.+++..|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 56788999999999999954 578999999997653221 22345666666554 56789999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|..+++.. .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 80 v~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 80 VMEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EEcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 99999999999888642 488999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........|++.|+|||.+.+..++.++||||+||++|||++|+.||...... .. ...+... ....+..
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--~~---~~~i~~~-~~~~p~~--- 223 (324)
T cd05589 153 GFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--EV---FDSIVND-EVRYPRF--- 223 (324)
T ss_pred CCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--HH---HHHHHhC-CCCCCCC---
Confidence 3333344567899999999999989999999999999999999999998644321 11 1111111 1111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||.+|| ++.++++
T Consensus 224 ---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 224 ---LSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ---CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 123567889999999999999 5666654
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=343.00 Aligned_cols=257 Identities=21% Similarity=0.346 Sum_probs=202.1
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~ 831 (1031)
++|.+++.||+|+||.||+|... .+..||||+++.... ....+.+.+|++++++++ ||||+++++++.+.
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR---SSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 57889999999999999999642 234799999965432 233567999999999996 99999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc--------------------------------------------------------
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA-------------------------------------------------------- 855 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 855 (1031)
+..++||||+++|+|.+++.....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 999999999999999998854210
Q ss_pred -------------------------------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee
Q 043316 856 -------------------------------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL 898 (1031)
Q Consensus 856 -------------------------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 898 (1031)
...+++.++..++.|++.|++|||+. +|+||||||+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEE
Confidence 12367888899999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhh
Q 043316 899 DSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSF 975 (1031)
Q Consensus 899 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~ 975 (1031)
+.++.+||+|||+++....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.........
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~- 349 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF- 349 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH-
Confidence 9999999999999986533221 1223446788999999988889999999999999999997 99997654321111
Q ss_pred hhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 976 SNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
............+. .....+.+++.+||+.||++||++.+|.+.|++
T Consensus 350 ---~~~~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 350 ---YNKIKSGYRMAKPD------HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred ---HHHHhcCCCCCCCc------cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 11111111111111 123467889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=324.01 Aligned_cols=255 Identities=24% Similarity=0.442 Sum_probs=208.4
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
..+|++.++||+|+||.||+|...+++.+|+|++.... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc----hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 45688899999999999999988789999999987643 22456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++... ...+++.+++.++.|++.|++|||+. ||+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 81 TELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 99999999999998653 24578999999999999999999999 999999999999999999999999999987644
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.........++..|+|||.+.++.++.++||||+|+++|+|++ |+.||...... ..............+.
T Consensus 157 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~---- 227 (261)
T cd05148 157 DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-----EVYDQITAGYRMPCPA---- 227 (261)
T ss_pred ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHHhCCcCCCCC----
Confidence 3322333445778999999988889999999999999999998 89998654321 1111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||+.||++|||++++.+.|+.
T Consensus 228 --~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 228 --KCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 112357789999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=329.13 Aligned_cols=249 Identities=22% Similarity=0.277 Sum_probs=196.3
Q ss_pred eecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCC
Q 043316 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 845 (1031)
||+|+||+||+|.. .+++.||||++...... .....+.+..|+.++++++||||+++.+++..+...++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-hhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 69999999999954 57899999998764322 22334677899999999999999999999999999999999999999
Q ss_pred chhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCcee
Q 043316 846 LTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA 924 (1031)
Q Consensus 846 L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 924 (1031)
|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++............
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccc
Confidence 998875422 234688999999999999999999999 9999999999999999999999999999876543333345
Q ss_pred eccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHH
Q 043316 925 FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSI 1004 (1031)
Q Consensus 925 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1004 (1031)
..|++.|+|||++.+..++.++||||+||++|||++|+.||........ ........ ...... .+ ......+
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~---~~~~~~-~~---~~~~~~~ 228 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRI---LNDSVT-YP---DKFSPAS 228 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHHHhh---cccCCC-Cc---ccCCHHH
Confidence 6789999999999999999999999999999999999999864432111 01111111 111111 00 1123357
Q ss_pred HHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 1005 MEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 1005 ~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
.+++.+||+.||++|| +++|+++
T Consensus 229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 229 KSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 7889999999999999 6777764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=321.19 Aligned_cols=251 Identities=24% Similarity=0.436 Sum_probs=203.0
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|+..++..+|+|.+.... ...+.+.+|+.++++++||||+++++++.+....++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-----MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-----ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 4688889999999999999988777789999986543 23467899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++..... .+++.+++.++.||+.|++|||+. +++|+||||+||+++.++.+||+|||.++.....
T Consensus 79 e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 79 EYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred EcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 99999999999976432 578999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
... .....++..|+|||...+..++.++|||||||++|||++ |+.||...... . .............+..
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~---~~~~~~~~~~~~~~~~--- 225 (256)
T cd05113 154 EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--E---TVEKVSQGLRLYRPHL--- 225 (256)
T ss_pred ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--H---HHHHHhcCCCCCCCCC---
Confidence 211 112335678999999988889999999999999999999 99997644321 1 1111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||.+||++.++++.++
T Consensus 226 ---~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 ---ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1246788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=343.67 Aligned_cols=252 Identities=23% Similarity=0.309 Sum_probs=204.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||+||+|+. .+++.||||+++...... ......+.+|+.++..++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK-RNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh-ccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence 3688999999999999999965 479999999997654322 23456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 80 MEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred EcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 9999999999999765 3578899999999999999999998 999999999999999999999999999987644
Q ss_pred CC-----------------------------CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCc
Q 043316 918 HS-----------------------------SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYV 968 (1031)
Q Consensus 918 ~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~ 968 (1031)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 32 1223456899999999999999999999999999999999999998654
Q ss_pred CccchhhhhhHHHhhhh-cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCC-HHHHHH
Q 043316 969 STNFSSFSNMITEINQN-LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT-MKKVCN 1027 (1031)
Q Consensus 969 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~ 1027 (1031)
... . ....+... .....+.... ....+.+++.+|++ ||.+||+ ++|+++
T Consensus 234 ~~~--~---~~~~i~~~~~~~~~p~~~~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 234 TLQ--E---TYNKIINWKESLRFPPDPP----VSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CHH--H---HHHHHhccCCcccCCCCCC----CCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 421 1 11111110 0111111110 22357788999997 9999999 999986
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=335.67 Aligned_cols=239 Identities=25% Similarity=0.353 Sum_probs=192.7
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|+. .+++.||||++.+..... ....+.+.+|+.++... +||||+++++++.+.+..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ-DDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh-ccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence 3699999999999965 468999999997654322 23456778888888876 69999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~ 153 (320)
T cd05590 80 GGDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153 (320)
T ss_pred CchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence 999999887643 478899999999999999999999 99999999999999999999999999988643333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+... ....+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--~~---~~~i~~~-~~~~~~~------~~~ 221 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--DL---FEAILND-EVVYPTW------LSQ 221 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HH---HHHHhcC-CCCCCCC------CCH
Confidence 4567899999999999888999999999999999999999998754321 11 1111111 1111111 123
Q ss_pred HHHHHHHhhccCCCCCCCCH
Q 043316 1003 SIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~ 1022 (1031)
.+.+++.+|++.||++||++
T Consensus 222 ~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHHcccCHHHCCCC
Confidence 56789999999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=337.05 Aligned_cols=240 Identities=26% Similarity=0.342 Sum_probs=190.4
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHH-HHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVL-ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||+||+|.. .+++.||+|++....... ......+.+|.. +++.++||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-KKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 3699999999999965 579999999997654322 223445556655 4578899999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (323)
T cd05575 80 GGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT 153 (323)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence 999999987643 478889999999999999999999 99999999999999999999999999997543333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .. ....+... ....+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~~---~~~~i~~~-~~~~~~~------~~~ 221 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--AE---MYDNILNK-PLRLKPN------ISV 221 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH--HH---HHHHHHcC-CCCCCCC------CCH
Confidence 456789999999999998999999999999999999999999864332 11 11111111 1111111 123
Q ss_pred HHHHHHHhhccCCCCCCCCHH
Q 043316 1003 SIMEVAILCLVESPEARPTMK 1023 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~ 1023 (1031)
.+.+++.+|++.||++||+++
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 222 SARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHhhcCHHhCCCCC
Confidence 577899999999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=326.71 Aligned_cols=256 Identities=25% Similarity=0.401 Sum_probs=204.8
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|.+.+.||+|+||.||+|... +++.||||+++.... ....+.+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS---NDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC---HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 46888899999999999999653 357899999876432 224578999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCC-----------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA-----------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
..++||||+++++|.++++... ....+++.++..++.|++.|++|||+. +++||||||+||+++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCC
Confidence 9999999999999999997542 123578889999999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhh
Q 043316 902 HEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~ 978 (1031)
+.+||+|||++........ ......+++.|+|||++.+..++.++||||+||++|||++ |..||...... ..
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-----~~ 233 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-----EV 233 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HH
Confidence 9999999999986532221 1123345788999999999999999999999999999998 99997544321 11
Q ss_pred HHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...+........+ . .....+.+++.+||+.||++||++.||++.|++
T Consensus 234 ~~~~~~~~~~~~~---~---~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 234 IECITQGRLLQRP---R---TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHcCCcCCCC---C---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1221111111111 1 122367889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=327.60 Aligned_cols=249 Identities=33% Similarity=0.530 Sum_probs=192.7
Q ss_pred ccceeecCCCccEEEEEeC-----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 763 EKYCIGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
..+.||.|+||.||+|.+. .+..|+||.++... .....+.|.+|++.+++++||||++++|++...+..++|
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS---SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS---SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc---ccccceeeeeccccccccccccccccccccccccccccc
Confidence 4578999999999999665 35789999995532 223478899999999999999999999999988889999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++|+|.+++.... ...+++.++..|+.||++||+|||+. +++||||+++||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EE--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred ccccccccccccccccc-cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999999998762 24588999999999999999999999 999999999999999999999999999987632
Q ss_pred CCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... .........|+|||.+.+..++.++||||||+++|||++ |+.||..... .. ....+........+..
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--~~---~~~~~~~~~~~~~~~~- 229 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--EE---IIEKLKQGQRLPIPDN- 229 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--HH---HHHHHHTTEETTSBTT-
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cc---ccccccccccceeccc-
Confidence 2211 123446788999999999889999999999999999999 7788765422 11 1122222211121111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
....+.+++.+||+.||++|||++|+++.|
T Consensus 230 -----~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 230 -----CPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -----SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -----hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 123577889999999999999999999986
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=339.57 Aligned_cols=259 Identities=22% Similarity=0.363 Sum_probs=194.9
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----Ce
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----QH 833 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~~ 833 (1031)
+|++.++||+|+||.||+|.. .+++.||||++.... ........+.+|++++++++||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF--EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh--ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCce
Confidence 478889999999999999954 578999999986532 1223456788999999999999999999988543 35
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||++ ++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 79 IYVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 799999995 68988887543 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---CceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-------------h
Q 043316 914 FLNPHSS---NWTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-------------F 975 (1031)
Q Consensus 914 ~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-------------~ 975 (1031)
....... ......|++.|+|||++.+ ..++.++||||+||++|||+||+.||......... .
T Consensus 152 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 231 (338)
T cd07859 152 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231 (338)
T ss_pred ccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 6432211 1234578999999999865 57899999999999999999999998654321000 0
Q ss_pred hhhH-----HHhhhhcCCCCCCC-ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 976 SNMI-----TEINQNLDHRLPTP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 976 ~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+ ...........+.. ..........+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000 00000001111100 0000011235678999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=335.17 Aligned_cols=244 Identities=24% Similarity=0.335 Sum_probs=196.2
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC-CceeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~~~~~~~~~~~lv 837 (1031)
+|++.+.||+|+||.||+|+. .+++.||||++.+.... .....+.+..|+.++..++| ++|+++++++.+.+..|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence 478889999999999999955 46789999999765432 22346678899999999976 4688999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 80 MEYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999999987543 478899999999999999999999 999999999999999999999999999875433
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........||+.|+|||++.+..++.++||||+||++|||+||+.||...... . ....+... ...++..
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~---~~~~i~~~-~~~~~~~---- 223 (324)
T cd05587 154 GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--E---LFQSIMEH-NVSYPKS---- 223 (324)
T ss_pred CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--H---HHHHHHcC-CCCCCCC----
Confidence 333345567899999999999989999999999999999999999998644321 1 11111111 1111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
...++.+++.+|++.||.+|++.
T Consensus 224 --~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 224 --LSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred --CCHHHHHHHHHHhhcCHHHcCCC
Confidence 12356788999999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=336.56 Aligned_cols=243 Identities=25% Similarity=0.315 Sum_probs=190.6
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHH-HHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVL-ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||+||+|+. .+++.||+|++.+...... .....+.+|.. +++.++||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKK-KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhh-hHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 3699999999999965 4678999999976543222 22334445544 4678899999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+++|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~ 153 (325)
T cd05602 80 GGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT 153 (325)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence 999999997643 467788899999999999999999 99999999999999999999999999998643333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+... .....+ ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~---~~~i~~~-~~~~~~------~~~~ 221 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EM---YDNILNK-PLQLKP------NITN 221 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--HH---HHHHHhC-CcCCCC------CCCH
Confidence 5567999999999999989999999999999999999999998643321 11 1111111 111111 1123
Q ss_pred HHHHHHHhhccCCCCCCCCHHHHH
Q 043316 1003 SIMEVAILCLVESPEARPTMKKVC 1026 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~evl 1026 (1031)
.+.+++.+|++.||.+||++.+.+
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 222 SARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCH
Confidence 567889999999999999987543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=340.37 Aligned_cols=252 Identities=17% Similarity=0.233 Sum_probs=195.1
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+|++.+.||+|+||.||+|. ..+++.||+|+.. .+.+.+|++++++++||||+++++++..+...++|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 579999999999999999995 4578999999643 23467899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+|++. ++|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+....
T Consensus 162 ~e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 162 LPRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred EecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 99995 68888876543 478899999999999999999999 999999999999999999999999999975432
Q ss_pred C-CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc------hhhhhhHHH---------
Q 043316 918 H-SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF------SSFSNMITE--------- 981 (1031)
Q Consensus 918 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~------~~~~~~~~~--------- 981 (1031)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||-...... ......+..
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 2 222345679999999999998899999999999999999999998753221100 000000000
Q ss_pred -------------hhhhcCCC--CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 -------------INQNLDHR--LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 -------------~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ ..+..........++.+++.+||+.||++|||++|+++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000 00001111223346889999999999999999999985
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-36 Score=333.35 Aligned_cols=243 Identities=25% Similarity=0.350 Sum_probs=192.6
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|+. .+++.||||+++...... ....+.+..|..++... +||||+++++++..++..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 3699999999999965 468899999997654322 23455566777777654 79999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 gg~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~ 153 (316)
T cd05592 80 GGDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA 153 (316)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence 999999987643 478899999999999999999999 99999999999999999999999999998654333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+... .+.++.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--~---~~~~i~~~-~~~~~~~------~~~ 221 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--E---LFDSILND-RPHFPRW------ISK 221 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--H---HHHHHHcC-CCCCCCC------CCH
Confidence 4567899999999999888999999999999999999999998654321 1 11111111 1111111 123
Q ss_pred HHHHHHHhhccCCCCCCCCHH-HHH
Q 043316 1003 SIMEVAILCLVESPEARPTMK-KVC 1026 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~-evl 1026 (1031)
.+.+++.+||+.||++||++. ++.
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHH
Confidence 567889999999999999875 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=299.52 Aligned_cols=256 Identities=23% Similarity=0.355 Sum_probs=209.1
Q ss_pred HHhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhh----hhcHHHHHHHHHHHhcC-CCCceeeeeeeEec
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDE----MADQDEFLNEVLALTEI-RHRNIIKFHGFCSN 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~ 830 (1031)
....|...+.+|.|..++|-++ ..++|..+|+|++........ ..-.+...+|+.+++++ .||+|+++.++++.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3467888889999999999998 556899999999865433221 12245667899999998 59999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
+...++|+|.|+.|.|.|++.... .+++++.++|++|+..|++|||.. +|||||+||+||++|++.++||+|||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccc
Confidence 999999999999999999998765 488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccccccccc------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHM------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ 984 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~ 984 (1031)
+|+.+.+ +......+||++|+|||.++- ..|+..+|+|++|||+|.++.|.+|| .....-.+-.++
T Consensus 169 Fa~~l~~-GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPF--wHRkQmlMLR~I----- 240 (411)
T KOG0599|consen 169 FACQLEP-GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPF--WHRKQMLMLRMI----- 240 (411)
T ss_pred eeeccCC-chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCch--hHHHHHHHHHHH-----
Confidence 9998864 455677899999999998753 35788999999999999999999994 222111122222
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+...+.....++.+......++|.+|++.||.+|.|++|+++
T Consensus 241 -meGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 241 -MEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred -HhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 223333333445566667889999999999999999999875
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=325.46 Aligned_cols=261 Identities=24% Similarity=0.338 Sum_probs=209.3
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|++|.||+|. ..+++.+|||.+..... .+....+++.+|+.+++.++||||+++++++.+++..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh-hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 467888899999999999996 45899999998865332 2233456889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 838 SEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|||+++++|.+++.... ....+++..++.++.|++.|++|||+. |++|+||||+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999999987432 234578999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........++..|+|||.+.+..++.++||||+|+++|+|++|+.||........... ........+..+ .
T Consensus 158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~---~- 230 (267)
T cd08229 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC---KKIEQCDYPPLP---S- 230 (267)
T ss_pred cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHh---hhhhcCCCCCCC---c-
Confidence 443333445688999999999888899999999999999999999999754332211111 111111111111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......+.+++.+||+.||++|||+.+|.+.+++
T Consensus 231 -~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 231 -DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred -ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 1223467889999999999999999999998874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=332.07 Aligned_cols=253 Identities=24% Similarity=0.325 Sum_probs=213.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~ 835 (1031)
...|+..+.||+|.||.||++.. .+|+.+|+|++.+...... .+.+.+.+|+++|+++. |||||.++++|++...++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~-~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK-EDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc-ccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 35688889999999999999955 4599999999988765332 25678999999999998 999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC----CceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE----HEAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~ 911 (1031)
+|||++.||.|.+.+... .+++.++..++.|++.++.|||+. ||+|||+||+|+++... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999775 289999999999999999999998 99999999999999754 4799999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+....+ .......+||+.|+|||++.+..|+..+||||+|+++|.|++|..||.......... ......+.
T Consensus 186 a~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--------~i~~~~~~ 256 (382)
T KOG0032|consen 186 AKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--------AILRGDFD 256 (382)
T ss_pred ceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--------HHHcCCCC
Confidence 998876 566788999999999999998999999999999999999999999987555321111 11112222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+........++++.|+..||.+|+|+.++++
T Consensus 257 f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 257 FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 222333344556788999999999999999999986
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=335.05 Aligned_cols=244 Identities=24% Similarity=0.354 Sum_probs=195.7
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|+. .+++.||||++++.... .....+.+..|.+++..+ +||||+++++++.+++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-QDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence 3699999999999965 46889999999765422 223456678888888866 79999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (321)
T cd05591 80 GGDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 153 (321)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence 999999887543 478899999999999999999999 99999999999999999999999999998654333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....|++.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+... ....+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--~---~~~~i~~~-~~~~p~~------~~~ 221 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--D---LFESILHD-DVLYPVW------LSK 221 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--H---HHHHHHcC-CCCCCCC------CCH
Confidence 4567899999999999889999999999999999999999998754321 1 11111111 1111111 123
Q ss_pred HHHHHHHhhccCCCCCCC-------CHHHHHH
Q 043316 1003 SIMEVAILCLVESPEARP-------TMKKVCN 1027 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rp-------s~~evl~ 1027 (1031)
++.+++.+|++.||++|| +++++++
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 577889999999999999 7787764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=342.75 Aligned_cols=253 Identities=19% Similarity=0.246 Sum_probs=196.2
Q ss_pred ccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.|+..+.||+|+||+||+|. ..+++.||+|++.+..... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN-RNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 57888999999999999994 4578999999997644222 234567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 81 DYIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999997643 478889999999999999999999 9999999999999999999999999997643110
Q ss_pred CC-----------------------------------------------CceeeccccCccccccccccCCCccccchhh
Q 043316 919 SS-----------------------------------------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951 (1031)
Q Consensus 919 ~~-----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwsl 951 (1031)
.. .....+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 0123468999999999998889999999999
Q ss_pred hHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHh--hccCCCCCCCCHHHHHH
Q 043316 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL--CLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 952 G~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~Rps~~evl~ 1027 (1031)
||++|||+||+.||......... .... ........+... ....+..+++.+ |+..+|..||++.|+++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~-~~i~---~~~~~~~~~~~~----~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQ-LKVI---NWENTLHIPPQV----KLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHH-HHHH---ccccccCCCCCC----CCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 99999999999998654331111 1110 000111111110 112245567766 55667777999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-36 Score=335.16 Aligned_cols=200 Identities=28% Similarity=0.391 Sum_probs=174.1
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.++||+|+||.||+|... ++..+|+|++.... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 67999999999999999999654 68899999886542 122356789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++... .+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 82 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999997643 4788899999999999999999742 799999999999999999999999999976532
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCc
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYV 968 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~ 968 (1031)
. ......++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred h--ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 2 223456899999999999888999999999999999999999998644
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=321.12 Aligned_cols=254 Identities=26% Similarity=0.458 Sum_probs=204.1
Q ss_pred hccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||.||+|.+. +...||||+++... .....+.|.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS---SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 56889999999999999999663 24689999986543 123456789999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 81 MIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 99999999999999997643 3688999999999999999999998 999999999999999999999999999998
Q ss_pred cCCCCCCce--eeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 915 LNPHSSNWT--AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 915 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
......... ...++..|+|||.+.+..++.++||||||+++|||++ |..||..... .. ....+........+
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--~~---~~~~~~~~~~~~~~ 230 (266)
T cd05033 156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--QD---VIKAVEDGYRLPPP 230 (266)
T ss_pred ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--HH---HHHHHHcCCCCCCC
Confidence 752222211 2334678999999998889999999999999999998 9999754322 11 11111111111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
. .....+.+++.+||+.+|++||++.||++.|++
T Consensus 231 ~------~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 231 M------DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred C------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 1 122367899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=328.45 Aligned_cols=260 Identities=21% Similarity=0.287 Sum_probs=194.7
Q ss_pred hccCccceeecCCCccEEEEEe-C-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC---CCCceeeeeeeEe----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-P-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI---RHRNIIKFHGFCS---- 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~---- 829 (1031)
++|++.+.||+|+||.||+|+. . +++.||+|+++..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~ 78 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 78 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC--CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC
Confidence 3688999999999999999965 3 4688999998654321 12234566777776655 6999999999985
Q ss_pred -cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 830 -NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 830 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
.....++||||++ ++|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 79 DRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CCCCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcc
Confidence 3456899999996 58988887543 23478899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC-
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD- 987 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~- 987 (1031)
||++...... .......|++.|+|||++.+..++.++||||+||++|||++|+.||...... ..............+
T Consensus 154 fg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 154 FGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEE 231 (290)
T ss_pred ccceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHHhCCCChh
Confidence 9999866433 2334566899999999998888999999999999999999999998754431 111111111000000
Q ss_pred --------------CCCCCCChhH-HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 --------------HRLPTPSRDV-MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 --------------~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......... .+....+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000000000 011235678999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=342.84 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=199.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++....... ......+.+|+.+++.++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLE-KEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence 3688999999999999999965 478999999997643221 23456688999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..+..
T Consensus 80 ~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 80 MEYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred ECCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999997643 488899999999999999999999 999999999999999999999999999875432
Q ss_pred CCC--------------------------------------CceeeccccCccccccccccCCCccccchhhhHHHHHHH
Q 043316 918 HSS--------------------------------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959 (1031)
Q Consensus 918 ~~~--------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell 959 (1031)
... .....+||+.|+|||++.+..++.++||||+||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 110 001246899999999999888999999999999999999
Q ss_pred hCCCCCCCcCccchhhhhhHHHhhhh-cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCC---HHHHHH
Q 043316 960 KGNHPRDYVSTNFSSFSNMITEINQN-LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT---MKKVCN 1027 (1031)
Q Consensus 960 tG~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~ 1027 (1031)
+|..||...... .....+... .....+... .....+.+++.+|+. +|.+|++ ++|+++
T Consensus 234 ~G~~Pf~~~~~~-----~~~~~i~~~~~~~~~~~~~----~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 234 VGYPPFCSDNPQ-----ETYRKIINWKETLQFPDEV----PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred cCCCCCCCCCHH-----HHHHHHHcCCCccCCCCCC----CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999998654321 111111110 011111110 112356678888986 9999998 888865
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=338.49 Aligned_cols=204 Identities=24% Similarity=0.320 Sum_probs=176.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.. .+++.||+|++.+.... +......+.+|+.++.+++||+|+++++++.+....|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML-EKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence 4688999999999999999954 56899999999764322 223456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 80 MEFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred EcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999997643 588899999999999999999999 999999999999999999999999999975432
Q ss_pred CCC-----------------------------------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCC
Q 043316 918 HSS-----------------------------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN 962 (1031)
Q Consensus 918 ~~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~ 962 (1031)
... .....+||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 012357899999999999989999999999999999999999
Q ss_pred CCCCCcC
Q 043316 963 HPRDYVS 969 (1031)
Q Consensus 963 ~P~~~~~ 969 (1031)
.||....
T Consensus 234 ~Pf~~~~ 240 (363)
T cd05628 234 PPFCSET 240 (363)
T ss_pred CCCCCCC
Confidence 9986443
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=324.08 Aligned_cols=258 Identities=20% Similarity=0.329 Sum_probs=202.2
Q ss_pred HHhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 830 (1031)
+.++|+..+.||+|+||.||+|... ++..||+|++.... ......++.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 3467999999999999999998542 35689999986432 12235678899999999999999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCc-------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAA-------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
+...++||||+++++|.++++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCC
Confidence 9999999999999999999865321 12357888999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCCc--eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHH
Q 043316 904 AHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 980 (1031)
++|+|||++.......... ....++..|+|||++.++.++.++|||||||++|||++ |..||...... ... .
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~---~ 232 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVL---R 232 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHH---H
Confidence 9999999997654322211 12344678999999998889999999999999999999 78887644321 111 1
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..........+ .. ....+.+++.+|++.||++|||+.|+++.|++
T Consensus 233 ~~~~~~~~~~~---~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVMEGGLLDKP---DN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHcCCcCCCC---CC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11111111111 11 12357889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=319.85 Aligned_cols=251 Identities=25% Similarity=0.463 Sum_probs=202.6
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.+|++.+.||+|+||.||+|.+.+++.+|+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-----MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEE
Confidence 3578889999999999999988778899999986532 23457889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 79 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~ 153 (256)
T cd05059 79 EYMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD 153 (256)
T ss_pred ecCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccc
Confidence 9999999999997643 2578999999999999999999999 9999999999999999999999999999865322
Q ss_pred CCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
... .....++..|+|||.+.+..++.++||||+|+++|||++ |+.||+..... ..............+..
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~--- 225 (256)
T cd05059 154 QYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-----EVVESVSAGYRLYRPKL--- 225 (256)
T ss_pred cccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-----HHHHHHHcCCcCCCCCC---
Confidence 111 111223457999999998899999999999999999999 88897644321 11122222222121111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...++.+++.+||+.+|++|||+.|+++.|.
T Consensus 226 ---~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 226 ---APTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred ---CCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 2336788999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=337.24 Aligned_cols=240 Identities=25% Similarity=0.346 Sum_probs=194.1
Q ss_pred ceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEe
Q 043316 765 YCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
+.||+|+||.||+++. .+|+.||+|++..... .......+.+|++++++++||||+++++++.+++..|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999954 3689999999976542 123455678899999999999999999999999999999999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 80 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 80 LRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 99999999986543 478999999999999999999999 999999999999999999999999999986544333
Q ss_pred CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHH
Q 043316 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000 (1031)
Q Consensus 921 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1031)
......|++.|+|||.+.+..++.++||||+||++|||++|+.||...... . ....+... ...++.. .
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~---~~~~i~~~-~~~~p~~------~ 221 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--E---TMTMILKA-KLGMPQF------L 221 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--H---HHHHHHcC-CCCCCCC------C
Confidence 344567899999999999888999999999999999999999998644321 1 11111111 1111111 1
Q ss_pred HHHHHHHHHhhccCCCCCCCCHHH
Q 043316 1001 LMSIMEVAILCLVESPEARPTMKK 1024 (1031)
Q Consensus 1001 ~~~l~~li~~cl~~dP~~Rps~~e 1024 (1031)
...+.+++.+||+.||++||++.+
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 235678899999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=340.32 Aligned_cols=254 Identities=20% Similarity=0.279 Sum_probs=201.4
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
..++|++.+.||+|+||.||+|+. .+++.||+|++.+.... .....+.+.+|+.+++.++||||+++++++.++...+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI-KRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 346799999999999999999955 46899999998654321 2234556789999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 999999999999998653 367788999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-CceeeccccCcccccccccc----CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh-cCCC
Q 043316 916 NPHSS-NWTAFAGTFGYAAPEIAHMM----RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN-LDHR 989 (1031)
Q Consensus 916 ~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~~~~ 989 (1031)
..... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+... ....
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~~~~i~~~~~~~~ 267 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GTYSKIMDHKNSLT 267 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-----HHHHHHHcCCCcCC
Confidence 43322 22345789999999998653 4788999999999999999999998644321 111111111 1111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCC--CCCHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEA--RPTMKKVCN 1027 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 1027 (1031)
++.. ......+.+++.+|++.+|++ ||++.|+++
T Consensus 268 ~~~~----~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 268 FPDD----IEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCc----CCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 1211 112246778899999999998 999999975
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=324.71 Aligned_cols=253 Identities=25% Similarity=0.372 Sum_probs=205.5
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~l 836 (1031)
...|++.++||.||.+.||++...+.+.||+|++.... .+.+..+.|.+|+..+.+++ |.+||++++|-..++.+|+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~--~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE--ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh--cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 46789999999999999999998888999999886543 34567889999999999996 9999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||-+ .+|..+++..... ..+| .++.+++||+.|+.+.|.+ ||||.||||.|+++ -.|.+||+|||.|..+.
T Consensus 438 vmE~Gd-~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 438 VMECGD-IDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLIDFGIANAIQ 510 (677)
T ss_pred Eeeccc-ccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeeeechhcccC
Confidence 999874 5999999876532 2334 7889999999999999999 99999999999998 57999999999999887
Q ss_pred CCCCC--ceeeccccCcccccccccc-----------CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 917 PHSSN--WTAFAGTFGYAAPEIAHMM-----------RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 917 ~~~~~--~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
.+... ....+||+.|||||.+... +.+++|||||+|||+|+|+.|+.||... ...+.++.
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-------~n~~aKl~ 583 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-------INQIAKLH 583 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-------HHHHHHHH
Confidence 65443 4567899999999987543 2467999999999999999999997633 33445555
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...++.......+..+. .++.++++.||+.||++|||+.|+++
T Consensus 584 aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 584 AITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 55555221111111111 13788999999999999999999986
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=357.74 Aligned_cols=259 Identities=21% Similarity=0.288 Sum_probs=200.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.++||+|+||.||+|.. .+++.||+|++..... ......+++.+|++++++++||||+++++++.+++..++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~-~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS-ENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc-cCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 5789999999999999999965 4689999999875432 2223456799999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCC--------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 838 SEYLDRGSLTTILKDDA--------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
|||+++++|.+++.... .....++..+++++.||++||+|||+. ||+||||||+||+++.++.++|+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEec
Confidence 99999999999986421 112456778899999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCC------------------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 910 GIAKFLNPHSS------------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 910 g~a~~~~~~~~------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
|+++....... .....+||+.|+|||++.+..++.++||||+||++|||+||+.||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 99986521110 011246899999999999989999999999999999999999998653321
Q ss_pred chhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhh
Q 043316 972 FSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARP-TMKKVCNLLC 1030 (1031)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~ 1030 (1031)
..... ... ..+....+ ..+....+.+++.+|++.||++|| +++++.+.|+
T Consensus 238 ki~~~---~~i--~~P~~~~p----~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 238 KISYR---DVI--LSPIEVAP----YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred hhhhh---hhc--cChhhccc----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11100 000 00000000 112223577889999999999996 5666666554
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=333.49 Aligned_cols=244 Identities=23% Similarity=0.328 Sum_probs=195.7
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv 837 (1031)
+|.+.+.||+|+||.||+|.. .+++.||||++.+.... .....+.+..|..++... +|++|+++++++.+.+..++|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 478889999999999999955 46789999999765422 223345677788888777 589999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 80 MEYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred EcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999999987543 478899999999999999999999 999999999999999999999999999986443
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........||+.|+|||++.+..++.++||||+||++|||+||+.||...... ... ..+... ...++.
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~---~~i~~~-~~~~p~----- 222 (323)
T cd05616 154 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELF---QSIMEH-NVAYPK----- 222 (323)
T ss_pred CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHH---HHHHhC-CCCCCC-----
Confidence 333344567899999999999999999999999999999999999998754321 111 111111 111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
....++.+++.+|++.||.+|++.
T Consensus 223 -~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 223 -SMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -cCCHHHHHHHHHHcccCHHhcCCC
Confidence 112356789999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=326.46 Aligned_cols=254 Identities=21% Similarity=0.280 Sum_probs=201.8
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.|++.++||+|+||+||+|.. .+++.||||++...... .......+.+|+.++++++||||+++++++.+++..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 377889999999999999965 57899999998764432 2223456789999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 80 TLMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred eccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 9999999998886532 24588999999999999999999999 9999999999999999999999999999875422
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||....... ........+.. .....+.
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~~~~~~~~~~-~~~~~~~------ 226 (285)
T cd05605 156 -ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KREEVERRVKE-DQEEYSE------ 226 (285)
T ss_pred -CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HHHHHHHHhhh-cccccCc------
Confidence 22234578999999999988889999999999999999999999987543211 11111111111 1111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
.....+.+++.+||+.||++|| ++.++++
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 1223577899999999999999 8888864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=320.46 Aligned_cols=253 Identities=25% Similarity=0.426 Sum_probs=204.7
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|++|.||+|...+++.||+|.++... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-----MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-----ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 5688899999999999999987778899999986532 23567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ...+++..+..++.|++.|++|||+. ||+||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 81 ELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred ecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 9999999999997654 34578999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
... ......+..|+|||...+..++.++||||||+++|||++ |+.||...... .....+........+.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~---- 227 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-----EVLQQVDQGYRMPCPP---- 227 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCC----
Confidence 211 111223457999999988889999999999999999999 99997643321 1111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+|++.+|++||++.++++.|+.
T Consensus 228 --~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 228 --GCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred --cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 122467889999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=332.65 Aligned_cols=244 Identities=25% Similarity=0.354 Sum_probs=196.2
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||+||+|+. .+++.||||++++.... .....+.+.+|+.++..+ +||||+++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL-QDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 3699999999999965 46889999999765422 223456778899998877 69999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (318)
T cd05570 80 GGDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT 153 (318)
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence 999999887643 488999999999999999999999 99999999999999999999999999987543333333
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....|++.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+... ....+.. ...
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--~~---~~~i~~~-~~~~~~~------~~~ 221 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--EL---FQSILED-EVRYPRW------LSK 221 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--HH---HHHHHcC-CCCCCCc------CCH
Confidence 4457899999999999999999999999999999999999998644321 11 1111111 1111111 123
Q ss_pred HHHHHHHhhccCCCCCCCCH-----HHHHH
Q 043316 1003 SIMEVAILCLVESPEARPTM-----KKVCN 1027 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~-----~evl~ 1027 (1031)
.+.+++.+||+.||++||++ .++++
T Consensus 222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 57789999999999999999 77764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=319.81 Aligned_cols=253 Identities=23% Similarity=0.424 Sum_probs=203.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+|.+.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence 4578889999999999999954 468899999986532 2456789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 81 TEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 99999999999997543 24578899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.... ......+..|+|||.+.+..++.++|||||||++|||++ |..||+.... ... ............+.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~---~~~~~~~~~~~~~~--- 228 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQV---YELLEKGYRMERPE--- 228 (263)
T ss_pred ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHH---HHHHHCCCCCCCCC---
Confidence 2211 112233568999999988899999999999999999998 8999764322 111 11111111111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....++.+++.+||+.||++|||+.|+.+.|+.
T Consensus 229 ---~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 229 ---GCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred ---CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 112467889999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=334.41 Aligned_cols=257 Identities=23% Similarity=0.379 Sum_probs=200.4
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec-
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN- 830 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~- 830 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|+++.... ....+.+.+|++++.++ +||||++++++|..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC---HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 4688999999999999999943 2357899999875431 22356678999999999 79999999998865
Q ss_pred CCeeEEEEEeccCCCchhhcccCCc-------------------------------------------------------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAA------------------------------------------------------- 855 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 855 (1031)
+...++++||+++++|.+++.....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 4578899999999999998854211
Q ss_pred ---cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccC
Q 043316 856 ---AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFG 930 (1031)
Q Consensus 856 ---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~ 930 (1031)
..++++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++..+...... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 12578999999999999999999999 9999999999999999999999999999876432221 223445678
Q ss_pred ccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHH
Q 043316 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAI 1009 (1031)
Q Consensus 931 y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 1009 (1031)
|+|||++.+..++.++||||+||++|||++ |+.||....... .+... .........+. ....++.+++.
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~---~~~~~~~~~~~------~~~~~~~~l~~ 310 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRR---LKEGTRMRAPE------YATPEIYSIML 310 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHH---HhccCCCCCCc------cCCHHHHHHHH
Confidence 999999999999999999999999999998 999986533211 11111 11111111111 12236788999
Q ss_pred hhccCCCCCCCCHHHHHHHhhC
Q 043316 1010 LCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 1010 ~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+||+.+|++||++.|+++.|++
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred HHccCChhhCcCHHHHHHHHHH
Confidence 9999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=323.12 Aligned_cols=249 Identities=22% Similarity=0.296 Sum_probs=194.9
Q ss_pred eecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCC
Q 043316 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 845 (1031)
||+|+||.||+++. .+|+.||+|++....... ......+..|++++++++||||+++++++.++...++||||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-KSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-chhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 69999999999955 469999999987543221 1224456679999999999999999999999999999999999999
Q ss_pred chhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceee
Q 043316 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925 (1031)
Q Consensus 846 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 925 (1031)
|.+++.... ...+++..+..++.|++.|++|||+. ||+||||||+||+++.++.++|+|||++...... ......
T Consensus 80 L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~ 154 (277)
T cd05607 80 LKYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-KTITQR 154 (277)
T ss_pred HHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-ceeecc
Confidence 998886543 23478899999999999999999999 9999999999999999999999999999876432 222345
Q ss_pred ccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHH
Q 043316 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005 (1031)
Q Consensus 926 ~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1005 (1031)
.++..|+|||++.+..++.++||||+||++|||++|+.||......... ..... ............ ....++.
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~-~~~~~---~~~~~~~~~~~~---~~~~~~~ 227 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK-EELKR---RTLEDEVKFEHQ---NFTEESK 227 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH-HHHHH---Hhhccccccccc---cCCHHHH
Confidence 6899999999999888999999999999999999999998644321111 11111 111111111111 1233578
Q ss_pred HHHHhhccCCCCCCCCHHHHHHH
Q 043316 1006 EVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 1006 ~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
+++.+||+.||++||+++|+++.
T Consensus 228 ~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 228 DICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHHHHhccCHhhCCCCccchhh
Confidence 89999999999999999776644
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=338.78 Aligned_cols=254 Identities=19% Similarity=0.262 Sum_probs=198.6
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
..++|++.+.||+|+||.||+|+. .+++.||+|++.+.... .....+.+.+|+.+++.++||||+++++++.+++..|
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 347899999999999999999965 46889999998654321 1234556889999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 999999999999999653 367889999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-CceeeccccCccccccccccC----CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh-cCCC
Q 043316 916 NPHSS-NWTAFAGTFGYAAPEIAHMMR----ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN-LDHR 989 (1031)
Q Consensus 916 ~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~~~~ 989 (1031)
..... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... . ....+... ....
T Consensus 193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-~----~~~~i~~~~~~~~ 267 (370)
T cd05621 193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-G----TYSKIMDHKNSLN 267 (370)
T ss_pred ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-H----HHHHHHhCCcccC
Confidence 43322 223567999999999987543 778999999999999999999998644321 1 11111111 0111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCC--CCCHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEA--RPTMKKVCN 1027 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 1027 (1031)
++.. ......+.+++.+|++.+|.+ |+++.|+++
T Consensus 268 ~p~~----~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 268 FPED----VEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred CCCc----ccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 1111 112235667788899865554 889999876
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=346.76 Aligned_cols=250 Identities=20% Similarity=0.225 Sum_probs=199.9
Q ss_pred ccCccceeecCCCccEEEEEe-CC-CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.|.+.+.||+|++|.||+|.. .+ ++.||+|.+.... ......+.+|+.+++.++|||||++++++..++..|+|
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND----ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 488899999999999999954 34 6788888764432 23345678899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 838 SEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|||+++|+|.++++.. .....+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 9999999999988643 2234578899999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 917 PHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 917 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+........+.
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-----~~~~~~~~~~~~~~~~-- 293 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-----EIMQQVLYGKYDPFPC-- 293 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCCCCCCCc--
Confidence 3321 123456899999999999889999999999999999999999998643321 1111111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.||++||++.++++
T Consensus 294 ----~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 294 ----PVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ----cCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11235778899999999999999999874
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=341.73 Aligned_cols=253 Identities=21% Similarity=0.280 Sum_probs=196.9
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|. ..+++.||||++.+..... ....+.+.+|++++++++||||+++++++.+....|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFK-KDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHH-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence 368889999999999999995 4578999999986643222 23456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.+..
T Consensus 80 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 80 MEFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999997643 478889999999999999999999 999999999999999999999999999964321
Q ss_pred CCC-----------------------------------------------CceeeccccCccccccccccCCCccccchh
Q 043316 918 HSS-----------------------------------------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHS 950 (1031)
Q Consensus 918 ~~~-----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvws 950 (1031)
... .....+||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 000 001246899999999999889999999999
Q ss_pred hhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCC---CCHHHHHH
Q 043316 951 FGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR---PTMKKVCN 1027 (1031)
Q Consensus 951 lG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~ 1027 (1031)
+||++|||++|+.||...... ..+...... .....++.. ......+.+++.+|++ +|.+| +++.|+++
T Consensus 234 lGvil~elltG~~Pf~~~~~~-~~~~~i~~~---~~~~~~p~~----~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSH-ETYRKIINW---RETLYFPDD----IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHH-HHHHHHHcc---CCccCCCCC----CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 999999999999998654321 111111110 001111111 0112356788999997 66665 59999875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=317.71 Aligned_cols=252 Identities=21% Similarity=0.409 Sum_probs=203.8
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.++||+|+||.||+|...+++.||+|.+.... ...+++.+|+.++++++||||+++++++. .+..+++|
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-----MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-----CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 5788899999999999999988889999999986543 24567899999999999999999999874 45689999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 80 EYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 9999999999987643 24578899999999999999999998 9999999999999999999999999999876522
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......++..|+|||++.+..++.++||||||+++||+++ |+.||...... ..............+.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~---- 226 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQNLERGYRMPRPD---- 226 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHHHcCCCCCCCC----
Confidence 21 1223345678999999988889999999999999999999 99998644321 1111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....++.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 --~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 227 --NCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 112368889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=320.13 Aligned_cols=261 Identities=24% Similarity=0.325 Sum_probs=209.7
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|++|.||+|... +++.||+|.++..... +....+.+.+|++++++++|++++++++++.+++..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM-DAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeeccccc-chhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 57889999999999999999655 8999999998653321 223467889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 838 SEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|||+++++|.+++.... ....+++.++..++.+++.|++|||+. ||+||||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 99999999999986532 224578899999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........++..|+|||.+.+..++.++||||+||++|+|++|+.||.......... ............+ .
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~---~- 230 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL---CKKIEKCDYPPLP---A- 230 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHH---HhhhhcCCCCCCC---h-
Confidence 43333345568899999999988889999999999999999999999975443221111 1111111111111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......+.+++.+||+.+|++|||+.+|++.|++
T Consensus 231 -~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 231 -DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred -hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 1223367789999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=329.62 Aligned_cols=243 Identities=25% Similarity=0.345 Sum_probs=193.2
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhc-CCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE-IRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|.. .+++.||||+++...... ....+.+..|..++.. .+||||+++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 3699999999999965 468899999997654211 1234556778888775 489999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05619 80 GGDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT 153 (316)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence 999999997643 478899999999999999999999 99999999999999999999999999997543333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....||..|+|||++.+..++.++||||+||++|||++|+.||...... . ....+.. ..+.++.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~---~~~~i~~-~~~~~~~~------~~~ 221 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--E---LFQSIRM-DNPCYPRW------LTR 221 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--H---HHHHHHh-CCCCCCcc------CCH
Confidence 4567899999999999888999999999999999999999998644321 1 1111111 11111111 123
Q ss_pred HHHHHHHhhccCCCCCCCCHH-HHH
Q 043316 1003 SIMEVAILCLVESPEARPTMK-KVC 1026 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~-evl 1026 (1031)
.+.+++.+||+.||++||++. ++.
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHHHHhccCHhhcCCChHHHH
Confidence 567889999999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=318.60 Aligned_cols=252 Identities=25% Similarity=0.359 Sum_probs=206.0
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|++|.||+|.. .+++.|++|.+...... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN--RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC--HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEE
Confidence 477788999999999999955 47899999998654322 335678899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ...+++..++.++.|++.|++|||+. |++||||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 79 EYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred EeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 9999999999997642 24678899999999999999999999 9999999999999999999999999999876554
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
........+++.|+|||+..++.++.++|||||||++|||++|+.||...... ...........+..+ .
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~---~--- 223 (256)
T cd08529 155 TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-----ALILKIIRGVFPPVS---Q--- 223 (256)
T ss_pred cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHcCCCCCCc---c---
Confidence 43334556889999999999888999999999999999999999998644321 111111111111111 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.....+.+++.+||+.+|++||++.|+++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 223467889999999999999999999863
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=334.66 Aligned_cols=241 Identities=24% Similarity=0.330 Sum_probs=190.7
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHH-HHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVL-ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|+. .+|+.||+|++.+..... ......+.+|.. +++.++||||+++++++..++..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN-RKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence 3699999999999954 579999999997653222 223455566655 4677899999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|..++.... .+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 153 (325)
T cd05604 80 GGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT 153 (325)
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence 999998887543 478899999999999999999999 99999999999999999999999999997543333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....|++.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+... .....+. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~---~~~~~~~~-~~~~~~~------~~~ 221 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--E---MYDNILHK-PLVLRPG------ASL 221 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--H---HHHHHHcC-CccCCCC------CCH
Confidence 5567899999999999989999999999999999999999998644321 1 11111111 1111111 123
Q ss_pred HHHHHHHhhccCCCCCCCCHHH
Q 043316 1003 SIMEVAILCLVESPEARPTMKK 1024 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~e 1024 (1031)
.+.+++.+|++.||.+||++++
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCCC
Confidence 5678899999999999998864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=330.03 Aligned_cols=245 Identities=23% Similarity=0.320 Sum_probs=193.8
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||+||+|+. .+++.||+|++++.... +....+.+.+|+.++.++ +||+|+++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH-DDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 3699999999999955 56889999999765432 223456788999999888 59999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|.+++.... .+++..+..++.|++.|++|||++ ||+||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (327)
T cd05617 80 GGDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT 153 (327)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence 999998886543 488999999999999999999999 99999999999999999999999999998543333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch-hhhhhHHHhhhhcCCCCCCCChhHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS-SFSNMITEINQNLDHRLPTPSRDVMDKL 1001 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1031)
....||+.|+|||++.+..++.++||||+||++|||++|+.||+....... ................++.. ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~ 227 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRF------LS 227 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCC------CC
Confidence 456789999999999998999999999999999999999999864332111 11111111111111122211 11
Q ss_pred HHHHHHHHhhccCCCCCCCCH
Q 043316 1002 MSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 1002 ~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
..+.+++.+|++.||++|+++
T Consensus 228 ~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 228 VKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHHHHhccCHHHcCCC
Confidence 356788999999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=342.66 Aligned_cols=252 Identities=18% Similarity=0.223 Sum_probs=196.0
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|+||.||+|+. .+++.||||++.+..... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM-RNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh-hhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 688999999999999999954 568999999987643222 234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|..+...
T Consensus 81 E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 81 DYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 9999999999997643 477888999999999999999999 9999999999999999999999999997532100
Q ss_pred C-------------------------------------------CCceeeccccCccccccccccCCCccccchhhhHHH
Q 043316 919 S-------------------------------------------SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955 (1031)
Q Consensus 919 ~-------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il 955 (1031)
. .......||+.|+|||++.+..++.++||||+||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0 001134689999999999998999999999999999
Q ss_pred HHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCC---CHHHHHH
Q 043316 956 LEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARP---TMKKVCN 1027 (1031)
Q Consensus 956 ~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp---s~~evl~ 1027 (1031)
|||++|+.||........ ...+.... .....+.. . .....+.+++.+|+ .+|.+|+ ++.|+++
T Consensus 235 yell~G~~Pf~~~~~~~~--~~~i~~~~--~~~~~~~~-~---~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 235 YEMLVGQPPFLADTPAET--QLKVINWE--TTLHIPSQ-A---KLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred eehhhCCCCCCCCCHHHH--HHHHhccC--ccccCCCC-C---CCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 999999999875543211 01111000 00111111 0 11224556677765 5999999 8888875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=323.50 Aligned_cols=255 Identities=25% Similarity=0.405 Sum_probs=202.7
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|.+.+.||+|+||.||++.. .++..+|+|.+.... ....+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 5788899999999999999963 235679999886532 234567899999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCC----------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA----------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1031)
..++||||+++++|.+++.... ....+++.+++.++.|++.||+|||++ |++||||||+||+++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 9999999999999999987442 123489999999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhH
Q 043316 903 EAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~ 979 (1031)
.++|+|||++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... ...
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-----~~~ 232 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVI 232 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHH
Confidence 999999999986543221 1122335678999999998889999999999999999998 89887544321 111
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..+........+. ....++.+++.+||+.||.+|||++|+.+.|++
T Consensus 233 ~~i~~~~~~~~~~------~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~ 278 (288)
T cd05093 233 ECITQGRVLQRPR------TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQN 278 (288)
T ss_pred HHHHcCCcCCCCC------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 2221111111111 112357889999999999999999999988863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=317.83 Aligned_cols=248 Identities=24% Similarity=0.381 Sum_probs=196.4
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccC
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDR 843 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 843 (1031)
+.||+|+||.||+|.. .+++.||+|.+..... ......+.+|++++++++||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP---PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccC
Confidence 3689999999999965 4789999998765321 22356789999999999999999999999999999999999999
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc-
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW- 922 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~- 922 (1031)
++|.++++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 78 ~~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 78 GDFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred CcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccccccc
Confidence 99999997543 3578899999999999999999999 99999999999999999999999999998653221110
Q ss_pred -eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHH
Q 043316 923 -TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000 (1031)
Q Consensus 923 -~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1031)
.....+..|+|||.+.++.++.++||||+||++|||++ |..||...... ..............+. ..
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~------~~ 221 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-----QTREAIEQGVRLPCPE------LC 221 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-----HHHHHHHcCCCCCCcc------cC
Confidence 11123457999999998889999999999999999998 88887643321 1111111111111111 12
Q ss_pred HHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 1001 LMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 1001 ~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...+.+++.+|++.+|++|||+.|+.++|++
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 3367889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-36 Score=332.13 Aligned_cols=198 Identities=24% Similarity=0.316 Sum_probs=173.6
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-C-----CceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-H-----RNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h-----~niv~l~~~~~~~ 831 (1031)
.+|++.+.||+|+||.|.+| +.++++.||||+++... ....+...|+.++..++ | -|+|+++++|...
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 37999999999999999999 66789999999997754 34556678999999986 4 3899999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC--ceEEecc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH--EAHVSDF 909 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~Df 909 (1031)
++.|||+|.++ .+|.++++.+. ...++...++.++.||+.||.+||+. +|||+||||+|||+..-+ .+||+||
T Consensus 261 ~HlciVfELL~-~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 261 NHLCIVFELLS-TNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred cceeeeehhhh-hhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEec
Confidence 99999999985 59999999876 35589999999999999999999999 999999999999997544 6999999
Q ss_pred ccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
|.|+...... .....+..|+|||++.|.+|+.+.||||||||++||++|.+-|....
T Consensus 336 GSSc~~~q~v---ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 336 GSSCFESQRV---YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred ccccccCCcc---eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 9999765432 26778999999999999999999999999999999999977665443
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=332.14 Aligned_cols=240 Identities=25% Similarity=0.353 Sum_probs=189.5
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHH-HHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVL-ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|+. .+++.||+|++.+...... .....+.+|.. +++.++||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKK-KEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHh-hHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 3699999999999965 4689999999976543222 23445555654 5788999999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+++|..++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (321)
T cd05603 80 GGELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT 153 (321)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence 99999888654 3477888999999999999999999 99999999999999999999999999987543333333
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....|++.|+|||++.+..++.++||||+||++|||++|+.||..... .. ....+... ...++.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~---~~~~i~~~-~~~~~~~------~~~ 221 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--SQ---MYDNILHK-PLQLPGG------KTV 221 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--HH---HHHHHhcC-CCCCCCC------CCH
Confidence 456789999999999988899999999999999999999999864432 11 11111111 1111111 123
Q ss_pred HHHHHHHhhccCCCCCCCCHH
Q 043316 1003 SIMEVAILCLVESPEARPTMK 1023 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~ 1023 (1031)
.+.+++.+|++.||.+||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHccCCHhhcCCCC
Confidence 577889999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=340.62 Aligned_cols=251 Identities=19% Similarity=0.236 Sum_probs=194.4
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.|+..++||+|+||+||+|+. .+++.||+|++.+.... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL-LRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh-hHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 588899999999999999954 57899999998764321 2234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 81 DYIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999999987643 478889999999999999999999 9999999999999999999999999997532100
Q ss_pred C-----------------------------------------------CCceeeccccCccccccccccCCCccccchhh
Q 043316 919 S-----------------------------------------------SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951 (1031)
Q Consensus 919 ~-----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwsl 951 (1031)
. ......+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 00112468999999999999899999999999
Q ss_pred hHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh-hcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCC---HHHHHH
Q 043316 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ-NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT---MKKVCN 1027 (1031)
Q Consensus 952 G~il~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~ 1027 (1031)
||++|||++|+.||....... ....+.. ......+... ....+..+++.+|+ .+|++|++ +.|+++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~-----~~~~i~~~~~~~~~p~~~----~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLE-----TQMKVINWQTSLHIPPQA----KLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHH-----HHHHHHccCCCcCCCCcc----cCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999999986543211 1111111 1111111111 11224556666665 59999997 877764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=329.10 Aligned_cols=243 Identities=25% Similarity=0.332 Sum_probs=193.3
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|+. .+++.||+|+++...... ....+.+..|..++... +||+|+++++++.+.+..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence 3699999999999965 468999999997654221 12355667788887654 89999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05620 80 GGDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA 153 (316)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence 999999987643 478899999999999999999999 99999999999999999999999999987543333334
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .. ....+... .+..+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~---~~~~~~~~-~~~~~~~------~~~ 221 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DE---LFESIRVD-TPHYPRW------ITK 221 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HH---HHHHHHhC-CCCCCCC------CCH
Confidence 556789999999999998999999999999999999999999864432 11 11111111 1111111 123
Q ss_pred HHHHHHHhhccCCCCCCCCHH-HHH
Q 043316 1003 SIMEVAILCLVESPEARPTMK-KVC 1026 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~-evl 1026 (1031)
++.+++.+||+.||++||++. ++.
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHH
Confidence 567889999999999999985 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=321.92 Aligned_cols=254 Identities=25% Similarity=0.335 Sum_probs=200.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++..++..++|
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP----GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc----cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 5789999999999999999964 578999999986532 12345678999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++.++..++.|++.|++|||+. +|+|||+||+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 85 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 99999999999986543 478899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.........++..|+|||.+. ...++.++||||+||++|||++|+.||......... ...... ....+...
T Consensus 159 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~~~~~~--~~~~~~~~--- 232 (267)
T cd06646 159 TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMSKS--NFQPPKLK--- 232 (267)
T ss_pred cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-eeeecC--CCCCCCCc---
Confidence 333334456889999999874 345788999999999999999999997533321100 000000 00011111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
........+.+++.+||+.||++|||++++++.+
T Consensus 233 -~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 233 -DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1112234678999999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=323.23 Aligned_cols=256 Identities=20% Similarity=0.315 Sum_probs=201.5
Q ss_pred hccCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|+.++++++||||+++++++..+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN---NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 5678889999999999999963 356789999987532 12335678899999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCc--------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 834 SFIVSEYLDRGSLTTILKDDAA--------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
.++||||+++++|.+++..... ...+++.++..++.|++.|++|||++ +++||||||+||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~ 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIG 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEc
Confidence 9999999999999999853211 23478889999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhh
Q 043316 900 SEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~ 976 (1031)
.++.+||+|||+++....... ......++..|+|||++.+..++.++|||||||++|||++ |..||..... ....
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~ 236 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVI 236 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHH
Confidence 999999999999986543221 1223345678999999988889999999999999999998 8888754322 1111
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+..........+. .....+.+++.+||+.||++||++.+|.+.|.+
T Consensus 237 ---~~~~~~~~~~~~~------~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 237 ---EMVRKRQLLPCSE------DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHHHcCCcCCCCC------CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111111111111 112357788999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-36 Score=336.11 Aligned_cols=253 Identities=23% Similarity=0.289 Sum_probs=200.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||+||+|.. .+++.||+|+++..... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLL-AQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence 3688899999999999999954 57899999999765431 223456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 80 MEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred ECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 99999999999997652 3588899999999999999999999 999999999999999999999999999987644
Q ss_pred CCCC-ceeeccccCcccccccc------ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh-cCCC
Q 043316 918 HSSN-WTAFAGTFGYAAPEIAH------MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN-LDHR 989 (1031)
Q Consensus 918 ~~~~-~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~~~~ 989 (1031)
.... .....||+.|+|||++. +..++.++||||+||++|||++|+.||...... . ....+... ....
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-~----~~~~i~~~~~~~~ 229 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-K----TYNNIMNFQRFLK 229 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-H----HHHHHHcCCCccC
Confidence 3222 23346899999999986 456788999999999999999999998644321 1 11111111 0011
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+... .....+.+++.+|++ +|++||+++++++
T Consensus 230 ~~~~~----~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 230 FPEDP----KVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCC----CCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11111 112356788889997 9999999999874
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=317.58 Aligned_cols=252 Identities=25% Similarity=0.451 Sum_probs=202.6
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|...++..+|+|.+..... ..+.+.+|+.++++++||+++++++++.. ...+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-----SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT 79 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-----CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEE
Confidence 56888999999999999999887888899999875432 34678999999999999999999998854 5679999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 80 EYMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 9999999999997643 23578999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
... .....++..|+|||...+..++.++||||||+++|||++ |..||...... ..............+.
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~---- 226 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-----EVLEQVERGYRMPCPQ---- 226 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCC----
Confidence 211 122345678999999988889999999999999999999 88887643321 1111221111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+|++++|++|||++++.+.|++
T Consensus 227 --~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 227 --DCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 123468889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=339.21 Aligned_cols=372 Identities=30% Similarity=0.428 Sum_probs=263.3
Q ss_pred CcccCceeeccCcccC-CCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccE
Q 043316 171 KLSLINVLTLCHNNFS-GRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGI 249 (1031)
Q Consensus 171 ~l~~L~~L~L~~n~l~-~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 249 (1031)
-|+-.+-.|+++|.++ +..|.++..+++++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-..+..|+.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 3455667889999998 578999999999999999999987 89999999999999999999998 67788889999999
Q ss_pred EEeecCcCC-CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccc
Q 043316 250 LYLYKNSLF-GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ 328 (1031)
Q Consensus 250 L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 328 (1031)
+.+++|++. .-+|..+..|..|+.||||+|+++ ..|..+..-.++-.|+||+|+|..+.-+.|-+|+.|-+||||+|+
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 999999885 336788889999999999999998 788888888889999999999984444456677777777777777
Q ss_pred cCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchh
Q 043316 329 LDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKS 408 (1031)
Q Consensus 329 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 408 (1031)
+. .+|+.+..+..|++|.|++|.+...--..+..+++|+.|.+++.+= +
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqR------------------------T------ 210 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQR------------------------T------ 210 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccc------------------------h------
Confidence 77 4566666666666666666655322111112222222222222211 0
Q ss_pred ccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCc
Q 043316 409 FRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQ 488 (1031)
Q Consensus 409 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~ 488 (1031)
...+|..+..+.+|.
T Consensus 211 -----------------------------------------------------------------l~N~Ptsld~l~NL~ 225 (1255)
T KOG0444|consen 211 -----------------------------------------------------------------LDNIPTSLDDLHNLR 225 (1255)
T ss_pred -----------------------------------------------------------------hhcCCCchhhhhhhh
Confidence 012444555555566
Q ss_pred EEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcc
Q 043316 489 VLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQ 568 (1031)
Q Consensus 489 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 568 (1031)
.+|||.|.+. ..|..+.++.+|+.|+|++|+|+ .+....+.-.+|+.|+||.|+++ .+|.++..+++|+.|++.+|+
T Consensus 226 dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~Nk 302 (1255)
T KOG0444|consen 226 DVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNK 302 (1255)
T ss_pred hccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCc
Confidence 6666666665 56666666666666666666666 33444444556777777777776 667777777777777777777
Q ss_pred cCC-CCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 569 FNH-KIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 569 l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
++- -+|..++++.+|+.+..++|.+. ..|+.++.+..|+.|.|++|++-++ |+++.-++.|+.||+..|+=--..|
T Consensus 303 L~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTL-PeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 303 LTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITL-PEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred ccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeec-hhhhhhcCCcceeeccCCcCccCCC
Confidence 652 26777777777777777777776 6777777777777777777777664 7777777777777777776544444
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=317.41 Aligned_cols=252 Identities=24% Similarity=0.416 Sum_probs=201.5
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.++||+|+||.||+|...+...||+|+++... ...+.+.+|++++++++||||+++++++.+ ...++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-----cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence 5689999999999999999987677789999987532 234678999999999999999999998754 5579999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 80 EYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 9999999999997643 23578899999999999999999999 9999999999999999999999999999876433
Q ss_pred CCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
... .....++..|+|||+..++.++.++||||+||++|||+| |+.||...... . .............+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--~---~~~~~~~~~~~~~~----- 225 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--E---VLDQVERGYRMPCP----- 225 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--H---HHHHHhcCCCCCCc-----
Confidence 221 123345678999999988889999999999999999999 78887644321 1 11111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.+....+.+++.+|++.||++||+++++++.|+.
T Consensus 226 -~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 226 -PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred -cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 1223467899999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=329.89 Aligned_cols=246 Identities=25% Similarity=0.378 Sum_probs=200.9
Q ss_pred eeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCC
Q 043316 766 CIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRG 844 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 844 (1031)
+||+|.||+||.|+. .+...+|||.+.... ....+...+||...++++|.|||+++|.+.+++..-|.||.++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd----sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD----SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc----chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 699999999999955 467789999986643 345778899999999999999999999999999999999999999
Q ss_pred CchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEeccccccccCCCCCCce
Q 043316 845 SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVSDFGIAKFLNPHSSNWT 923 (1031)
Q Consensus 845 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~ 923 (1031)
+|.+.++..-+.-.=.+.++-.+.+||++||.|||+. .|||||||-+||+++. .|.+||+|||-++++..-.....
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TE 734 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTE 734 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcccc
Confidence 9999998764322226788889999999999999999 9999999999999974 78999999999998765555567
Q ss_pred eeccccCcccccccccc--CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHH
Q 043316 924 AFAGTFGYAAPEIAHMM--RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL 1001 (1031)
Q Consensus 924 ~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1031)
.+.||..|||||++..+ .|++++|||||||.+.||.||++||-........ +.+-. +...-|+.+... .
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA---MFkVG---myKvHP~iPeel---s 805 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA---MFKVG---MYKVHPPIPEEL---S 805 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh---hhhhc---ceecCCCCcHHH---H
Confidence 78899999999999765 4889999999999999999999997544432211 11111 122222222322 3
Q ss_pred HHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 1002 MSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1002 ~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+...+|.+|+.+||.+||+++++++
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhcc
Confidence 35667899999999999999999875
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=323.17 Aligned_cols=250 Identities=25% Similarity=0.451 Sum_probs=207.3
Q ss_pred hccCccceeecCCCccEEEEEeCC-CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+.....+||.|.||.||.|.|+. .-.||||.++.+. -..++|.+|..+|+.++|||+|+++|+|..+..+|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-----MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIi 341 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYII 341 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-----hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEE
Confidence 456778899999999999997754 5689999987654 3588999999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+|||..|+|.+|++.... .+++--....++.||+.|++||..+ ++|||||.++|+|+.++..|||+|||+++.+..
T Consensus 342 TEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTG 417 (1157)
T ss_pred EecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcC
Confidence 999999999999998653 4566678889999999999999999 999999999999999999999999999999865
Q ss_pred CCCCceeecc---ccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 918 HSSNWTAFAG---TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 918 ~~~~~~~~~g---t~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
+. ++..+| ++.|.|||-+....++.|+|||+|||++||+.| |-.||...+. .......++. +...-+.
T Consensus 418 DT--YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl--SqVY~LLEkg---yRM~~Pe- 489 (1157)
T KOG4278|consen 418 DT--YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYGLLEKG---YRMDGPE- 489 (1157)
T ss_pred Cc--eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH--HHHHHHHhcc---ccccCCC-
Confidence 43 344444 578999999988899999999999999999999 7788765543 1222222222 2222111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+..+++++++.||+++|.+||+++|+-+.+|
T Consensus 490 -----GCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 490 -----GCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred -----CCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 12236788899999999999999999999886
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=328.53 Aligned_cols=252 Identities=21% Similarity=0.432 Sum_probs=198.9
Q ss_pred hccCccceeecCCCccEEEEEeC-CCc----EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.+|+..+.||+|+||.||+|.+. ++. .||+|+++... .....+.+.+|+.+++.++||||++++|++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence 46889999999999999999653 343 48999986432 123456788999999999999999999999775 5
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred ceeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccc
Confidence 689999999999999998653 3578889999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCc--eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSSNW--TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
......... ....++..|+|||++.+..++.++|||||||++|||++ |+.||+..... .+..... . ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~---~--~~~~ 230 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE---K--GERL 230 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHh---C--CCCC
Confidence 765433221 12234678999999998899999999999999999998 99998654321 1111111 1 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.... ....+.+++.+||+.||.+||++.|++..+.
T Consensus 231 ~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 231 PQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred CCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111 1235778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=318.11 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=201.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh-hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
++|...+.||+|++|.||+|.. .+++.||+|.+....... .....+.+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999954 578999999986543211 12235678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||++....
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999987643 478889999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 917 PHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 917 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .....++..|+|||++.+..++.++||||+|+++|||++|+.||...... ...............+.
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~- 230 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQPTNPQLPS- 230 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHHHhccCCCCCCCc-
Confidence 32211 12345778999999999988999999999999999999999997643221 11111111111111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.....+.+++.+||..+|++|||+.|+++.
T Consensus 231 -----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 231 -----HVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----cCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 122357788999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=321.93 Aligned_cols=255 Identities=25% Similarity=0.431 Sum_probs=202.8
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
.+|...+.||+|+||.||+|.. .++..+++|.+.... ....+.+.+|++.+++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT----LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc----HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 4678889999999999999963 235678999886543 233467889999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
..++||||+++++|.+++..... ...+++..++.++.||+.|++|||++ +|+||||||+||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~ 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVG 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc
Confidence 99999999999999999975421 23478999999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhh
Q 043316 900 SEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~ 976 (1031)
.++.++|+|||++........ ......++..|+|||.+.+..++.++||||+||++|||+| |+.||...... .
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~-- 233 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--E-- 233 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--H--
Confidence 999999999999986543221 1123445788999999998889999999999999999999 99997544321 1
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.............+. .....+.+++.+||+.||++|||+++|++.|++
T Consensus 234 -~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~ 281 (291)
T cd05094 234 -VIECITQGRVLERPR------VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHA 281 (291)
T ss_pred -HHHHHhCCCCCCCCc------cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 111111111111111 122367899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=344.21 Aligned_cols=254 Identities=26% Similarity=0.336 Sum_probs=201.9
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ---- 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~---- 832 (1031)
.++|.+.+.||+|+||+||+|+ ..+++.||||++..... .......+.+|+..+..++|+|++++++.+...+
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 4689999999999999999995 45799999999866432 2234567889999999999999999988775432
Q ss_pred ----eeEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEe
Q 043316 833 ----HSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVS 907 (1031)
Q Consensus 833 ----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 907 (1031)
..++||||+++|+|.++++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 3689999999999999997542 234688899999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 908 DFGIAKFLNPHS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 908 Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-----~~~~~~~~~~ 260 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-----EEVMHKTLAG 260 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcC
Confidence 999998654321 122346789999999999998999999999999999999999999864332 1111111111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+. ....++.+++.+||+.||++||++.++++
T Consensus 261 ~~~~~~~------~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 261 RYDPLPP------SISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCCCC------CCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 1111111 11235778899999999999999999875
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=316.75 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=203.3
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|+||.||++.. .+++.||+|.++.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS---SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc---hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEE
Confidence 477889999999999999955 4789999999864321 234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||++++++.+++.... ...+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++++|||.+......
T Consensus 78 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 78 EYCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred eeCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 9999999999886532 23478899999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
........++..|+|||++.+..++.++||||+|+++|+|++|+.||..... ...............+.
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~------ 222 (255)
T cd08219 154 GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLILKVCQGSYKPLPS------ 222 (255)
T ss_pred ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHHHHhcCCCCCCCc------
Confidence 3333456788999999999988899999999999999999999999864322 11111111111111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.....+.+++.+||+.||++||++.|++..
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 112357789999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=321.11 Aligned_cols=256 Identities=21% Similarity=0.305 Sum_probs=201.0
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
.+|.+.+.||+|+||.||+|... +++.||+|+++... .....+.+.+|+.++.+++||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA---EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence 45777888999999999999653 35789999987543 1223567889999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCC-------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA-------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
..++++||+++++|.+++.... ....+++..+..++.|++.||+|+|++ ||+||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~ 158 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVF 158 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEec
Confidence 9999999999999999985321 123478888999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhh
Q 043316 900 SEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~ 976 (1031)
.++.+||+|||+++....... ......+++.|+|||.+.++.++.++||||+||++|||++ |..||......
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----- 233 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----- 233 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-----
Confidence 999999999999886543221 1123345778999999988889999999999999999998 88887643321
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+........+. +....+.+++.+||+.+|++||+++||++.|++
T Consensus 234 ~~~~~i~~~~~~~~~~------~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 DVIEMIRNRQVLPCPD------DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHcCCcCCCCC------CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1112221111111111 122357789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=323.75 Aligned_cols=254 Identities=27% Similarity=0.444 Sum_probs=201.4
Q ss_pred cCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|+..+.||+|+||+||+|+.. +++.||+|++....... .......+|+.++++++||||+++++++.+....++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE--EEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH--HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc--cccchhhhhhhcccccccccccccccccccccccccccc
Confidence 667889999999999999654 57799999998765322 223345669999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++++|.+++.. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~ 152 (260)
T PF00069_consen 79 YCPGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN 152 (260)
T ss_dssp EETTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT
T ss_pred ccccccccccccc---cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999999983 24578999999999999999999999 99999999999999999999999999998653333
Q ss_pred CCceeeccccCcccccccc-ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 920 SNWTAFAGTFGYAAPEIAH-MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
.......++..|+|||++. +..++.++||||+|+++|+|++|..||...... .................... ..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~ 227 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-DQLEIIEKILKRPLPSSSQQ----SR 227 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-HHHHHHHHHHHTHHHHHTTS----HT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccch-hhhhhhhhcccccccccccc----cc
Confidence 4445667899999999998 778999999999999999999999998755211 11111111111111111000 00
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.||++||++.|+++
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00157889999999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-35 Score=319.02 Aligned_cols=256 Identities=22% Similarity=0.340 Sum_probs=203.9
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|.+.+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 57889999999999999999653 24789999986543 1233567889999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc-------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceE
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA-------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH 905 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 905 (1031)
..++||||+++++|.+++..... ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEE
Confidence 99999999999999999965432 22468889999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHh
Q 043316 906 VSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
|+|||+++....... ......++..|+|||.+.++.++.++|||||||++||+++ |+.||...... ... ...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~---~~~ 234 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVL---KFV 234 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHH---HHH
Confidence 999999986543221 1223446788999999988889999999999999999998 89997643321 111 111
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
........+.. ....+.+++.+||+.+|++|||+.|+++.|++
T Consensus 235 ~~~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 235 IDGGHLDLPEN------CPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred hcCCCCCCCCC------CCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11111111111 13467889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=327.88 Aligned_cols=244 Identities=23% Similarity=0.339 Sum_probs=195.3
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv 837 (1031)
+|+..+.||+|+||.||+|.. .+++.||+|++.+..... ....+.+..|+.++..+. |++|+++++++.+.+..|+|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence 467788999999999999954 578999999997654222 234566788888888885 67888999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 80 MEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999999987643 488899999999999999999999 999999999999999999999999999986433
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+... ....+..
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~~i~~~-~~~~p~~---- 223 (323)
T cd05615 154 DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-----ELFQSIMEH-NVSYPKS---- 223 (323)
T ss_pred CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhC-CCCCCcc----
Confidence 333334456899999999999888999999999999999999999998654321 111111111 1111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
....+.+++.+|++.||.+|++.
T Consensus 224 --~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 224 --LSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred --CCHHHHHHHHHHcccCHhhCCCC
Confidence 12356788999999999999974
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=323.60 Aligned_cols=249 Identities=26% Similarity=0.387 Sum_probs=202.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+|+..+.||+|++|.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..+...++|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC----cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 4688889999999999999954 578999999986543 22356788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++... .+++.++..++.|++.|++|||+. ||+||||||+||+++.++.++|+|||.+.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred ecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 9999999999998643 368889999999999999999999 999999999999999999999999999886544
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........+++.|+|||.+.+..++.++|||||||++|+|++|+.||........ .. ... ....+.... +
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~---~~~-~~~~~~~~~-~--- 239 (296)
T cd06654 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LY---LIA-TNGTPELQN-P--- 239 (296)
T ss_pred cccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HH---HHh-cCCCCCCCC-c---
Confidence 33333445788999999999888889999999999999999999999864433111 11 110 000111111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+++.+||.+||++||++.|+++
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred cccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 112245778999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.07 Aligned_cols=246 Identities=26% Similarity=0.392 Sum_probs=195.1
Q ss_pred eeecCCCccEEEEEe---CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 766 CIGKGRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
.||+|+||.||+|.+ .++..+|+|+++... .+....+.+.+|+.+++.++||||+++++++.. +..++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN--NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC--CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCC
Confidence 589999999999954 357899999986543 222346778999999999999999999998864 46789999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC-
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN- 921 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~- 921 (1031)
+++|.+++.... .+++..+..++.|++.|++|||++ ||+||||||+||+++.++.+||+|||++.........
T Consensus 79 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 79 LGPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 999999997543 478899999999999999999999 9999999999999999999999999999876433221
Q ss_pred --ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 922 --WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 922 --~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
.....++..|+|||.+.+..++.++|||||||++|||++ |+.||...... ..... +........+.
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~---i~~~~~~~~~~------ 221 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQM---IESGERMECPQ------ 221 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH---HHCCCCCCCCC------
Confidence 112233578999999988888999999999999999998 99998654331 11111 21111111221
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....++.+++.+||+.||++||++++|.+.|++
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 122357789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=321.22 Aligned_cols=261 Identities=20% Similarity=0.357 Sum_probs=200.6
Q ss_pred hccCccceeecCCCccEEEEEeC-----------------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCce
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-----------------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni 821 (1031)
++|++.++||+|+||.||+|+.. ++..||+|++.... .....+.+.+|+++++.++||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA---NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCc
Confidence 46889999999999999998532 23468999986542 12345688999999999999999
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhhcccCCc--------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCC
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAA--------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISS 893 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 893 (1031)
+++++++.+++..++||||+++++|.+++..... ...+++.++..++.|++.|++|||+. +++||||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp 158 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLAT 158 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCh
Confidence 9999999999999999999999999999875421 12467889999999999999999999 999999999
Q ss_pred CCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh--CCCCCCCcC
Q 043316 894 KNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK--GNHPRDYVS 969 (1031)
Q Consensus 894 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt--G~~P~~~~~ 969 (1031)
+||+++.++.++|+|||++..+...... .....++..|+|||...++.++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05095 159 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS 238 (296)
T ss_pred heEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC
Confidence 9999999999999999999865432211 122334678999999888889999999999999999998 677865433
Q ss_pred ccchhhhhhHHH-hhhhcCC-CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 970 TNFSSFSNMITE-INQNLDH-RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 970 ~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. ........ ....... ..+... .....+.+++.+||+.||++||++.||++.|++
T Consensus 239 ~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 239 DE--QVIENTGEFFRDQGRQVYLPKPA----LCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred hH--HHHHHHHHHHhhccccccCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 21 11111111 0000000 111111 112467789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=331.29 Aligned_cols=258 Identities=22% Similarity=0.303 Sum_probs=196.2
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC---
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--- 832 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--- 832 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ--NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc--chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence 357899999999999999999954 5689999999865431 2234567889999999999999999999986543
Q ss_pred ---eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 833 ---HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 833 ---~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecC
Confidence 57999999975 56555532 367788999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH---------
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT--------- 980 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~--------- 980 (1031)
|+++..... .......+|+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.....
T Consensus 168 g~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 168 GLARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CCccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCcHHH
Confidence 999865322 2234457899999999999989999999999999999999999998754321 11110000
Q ss_pred ------Hhhhh--cCCCCCCCC--------------hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 ------EINQN--LDHRLPTPS--------------RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 ------~~~~~--~~~~~~~~~--------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..... ..+..+... .........+.+++.+|++.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000 000000000 000001235789999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=334.38 Aligned_cols=259 Identities=19% Similarity=0.247 Sum_probs=200.5
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
+.....++|++.+.||+|+||.||+|+. .+++.||+|++.+.... .....+.+.+|+.+++.++||||+++++++.++
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 3344458899999999999999999955 46899999998654321 223455678999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
+..++||||+++|+|.++++.. .++...+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999998653 367888999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-CceeeccccCcccccccccc----CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 912 AKFLNPHSS-NWTAFAGTFGYAAPEIAHMM----RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 912 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
+........ ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+....
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-----~~~~~i~~~~ 263 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GTYSKIMNHK 263 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH-----HHHHHHHcCC
Confidence 987643322 22356789999999998753 3788999999999999999999998644321 1111111111
Q ss_pred -CCCCCCCChhHHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHH
Q 043316 987 -DHRLPTPSRDVMDKLMSIMEVAILCLVESPEA--RPTMKKVCNL 1028 (1031)
Q Consensus 987 -~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 1028 (1031)
...++.. .+....+.+++.+|+..++.+ |+++.|+++.
T Consensus 264 ~~~~~~~~----~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 264 NSLTFPDD----NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CcccCCCc----CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 1111111 112335677888999844443 7899998763
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=332.59 Aligned_cols=250 Identities=26% Similarity=0.482 Sum_probs=204.0
Q ss_pred cCccceeecCCCccEEEEE-eCCC----cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 761 FGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~-~~~~----~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
....++||+|+||+||+|- .++| .+||+|++.... ..+..+++.+|+.+|.+++|||+++++|+|.... +.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t---~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT---SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC---CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 3456789999999999994 4444 478999886643 2345778999999999999999999999998876 78
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||++|++.|+|.+|++.++ ..+..+....|..|||+||.|||++ ++|||||..+||||.+-.++||.|||+|+..
T Consensus 774 lvtq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll 848 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLL 848 (1177)
T ss_pred HHHHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhcc
Confidence 9999999999999999864 4678899999999999999999999 9999999999999999999999999999988
Q ss_pred CCCCCCcee--eccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 916 NPHSSNWTA--FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 916 ~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.++...+.. ....+.|||=|.+....++.++|||||||++||++| |..||+..... ++.+..+.. .+++.
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--eI~dlle~g-----eRLsq 921 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--EIPDLLEKG-----ERLSQ 921 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--HhhHHHhcc-----ccCCC
Confidence 766554433 334678999999999999999999999999999999 99998766542 222222222 12222
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
++. ....+.-++.+||..|++.||+++++...+.
T Consensus 922 Ppi----CtiDVy~~mvkCwmid~~~rp~fkel~~~fs 955 (1177)
T KOG1025|consen 922 PPI----CTIDVYMVMVKCWMIDADSRPTFKELAEEFS 955 (1177)
T ss_pred CCC----ccHHHHHHHHHHhccCcccCccHHHHHHHHH
Confidence 222 2235666788999999999999999988764
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=322.50 Aligned_cols=261 Identities=21% Similarity=0.268 Sum_probs=199.4
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|++|.||+|.. .+++.||+|+++.... +....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE--EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc--cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence 478889999999999999965 4789999999865431 2223567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||++ ++|.+++........+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 9997 68888887654445688999999999999999999999 9999999999999999999999999999866543
Q ss_pred CCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH-----------------
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT----------------- 980 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~----------------- 980 (1031)
........+++.|+|||++.+. .++.++||||+||++|||+||+.||.......... ....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLF-RIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHHHHhCCCChhhhhcchhhH
Confidence 3333445678899999988654 46889999999999999999999986443211110 0000
Q ss_pred HhhhhcCCCCCCCC-hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 EINQNLDHRLPTPS-RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+....... ........++.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000000 000011235678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=339.19 Aligned_cols=365 Identities=29% Similarity=0.419 Sum_probs=192.8
Q ss_pred CCCcccEEecCCCcCc-CCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCce
Q 043316 99 SFPHLMYLNLSCNVLY-GNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINV 177 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 177 (1031)
-|+.++-.|+++|.|+ +.+|..+..++.++.|.|...++. .+|.+++.|.+|++|.+++|+++ ++..++..|+.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 3555666667777666 356666666666666666666665 55666666666665555555555 44444444445555
Q ss_pred eeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcC
Q 043316 178 LTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 257 (1031)
+++.+|++.. .-||..+..|..|..||||+|+++ ..|..+..-+++-.|+|++|+|
T Consensus 83 v~~R~N~LKn-----------------------sGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~I 138 (1255)
T KOG0444|consen 83 VIVRDNNLKN-----------------------SGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNI 138 (1255)
T ss_pred Hhhhcccccc-----------------------CCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcc
Confidence 5554444431 124555555556666666666665 5565555556666666666666
Q ss_pred CCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccc
Q 043316 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI 337 (1031)
Q Consensus 258 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 337 (1031)
..++.+.|-+|..|-.||||+|++. .+|..+..|..|++|+|++|.+..---..+..+++|+
T Consensus 139 etIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~----------------- 200 (1255)
T KOG0444|consen 139 ETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLS----------------- 200 (1255)
T ss_pred ccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhh-----------------
Confidence 5544445566666667777777765 5555666666666666666655422112222333444
Q ss_pred cccccCceEEcccCCCc-CccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccc
Q 043316 338 GNLSSLRTLYLYDNGFY-GLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416 (1031)
Q Consensus 338 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 416 (1031)
+|.+++.+-+ .-+|..+..+.+|..+|++.|.+. ..|+.+..+.+|+.|+||+|+|+.+.
T Consensus 201 -------vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~----------- 261 (1255)
T KOG0444|consen 201 -------VLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELN----------- 261 (1255)
T ss_pred -------hhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeee-----------
Confidence 4444433322 223445555555555555555554 34444444444444444444433210
Q ss_pred ceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCc
Q 043316 417 RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNH 496 (1031)
Q Consensus 417 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~ 496 (1031)
...+...+|++|+||.|+
T Consensus 262 --------------------------------------------------------------~~~~~W~~lEtLNlSrNQ 279 (1255)
T KOG0444|consen 262 --------------------------------------------------------------MTEGEWENLETLNLSRNQ 279 (1255)
T ss_pred --------------------------------------------------------------ccHHHHhhhhhhccccch
Confidence 011223455666666666
Q ss_pred ccCCChhhhhccccCceeeccccccc-CCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCch
Q 043316 497 IVGKIPVQFEKLFSLNKLILNLNQLS-GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575 (1031)
Q Consensus 497 l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 575 (1031)
++ ..|.+++++++|+.|++.+|+++ ..+|..++.+.+|+.+..++|++. .+|+.+..+..|+.|.|+.|++- ..|+
T Consensus 280 Lt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPe 356 (1255)
T KOG0444|consen 280 LT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPE 356 (1255)
T ss_pred hc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echh
Confidence 65 56666666666666666666655 234444445555555555555444 44444444444444444444442 2344
Q ss_pred hhccccccCceeccCc
Q 043316 576 EFEKLIHLSELDLSHN 591 (1031)
Q Consensus 576 ~~~~l~~L~~L~Ls~N 591 (1031)
++.-++.|+.|||..|
T Consensus 357 aIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 357 AIHLLPDLKVLDLREN 372 (1255)
T ss_pred hhhhcCCcceeeccCC
Confidence 4444444444444443
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=320.65 Aligned_cols=257 Identities=25% Similarity=0.386 Sum_probs=202.8
Q ss_pred HhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~ 830 (1031)
.++|+..+.||+|+||.||+|... ....+|+|++..... ......+.+|++++.++ +||||+++++++..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC---HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 356888999999999999999653 236899999875421 22356788999999999 79999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccC-------------CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCee
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDD-------------AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 897 (1031)
++..+++|||+++|+|.++++.. .....+++..++.++.|++.|++|||+. +|+||||||+||+
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil 164 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVL 164 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEE
Confidence 99999999999999999998643 1234688999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchh
Q 043316 898 LDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSS 974 (1031)
Q Consensus 898 l~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~ 974 (1031)
++.++.+||+|||.++.+...... .....++..|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~ 242 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--E 242 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--H
Confidence 999999999999999876432211 122234678999999988889999999999999999998 98887543321 1
Q ss_pred hhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.............+. .....+.+++.+|++.||++|||++|+++.|+.
T Consensus 243 ---~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 243 ---LFKLLKEGYRMEKPQ------NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred ---HHHHHHcCCcCCCCC------CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 111111111111111 112367789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=314.10 Aligned_cols=252 Identities=23% Similarity=0.420 Sum_probs=201.7
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|.+.+.||+|++|.||+|....+..+|+|++.... ...+.+.+|++++++++|||++++++++.. +..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEE
Confidence 5688889999999999999987777789999876532 235678899999999999999999998854 5678999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.++++... ...+++..+..++.|++.||+|||+. |++||||||+||++++++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 80 EFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 9999999999997643 23578899999999999999999999 9999999999999999999999999999866432
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......++..|+|||...+..++.++||||+|+++|||+| |+.||...... . .............+ .
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~---~~~~~~~~~~~~~~---~- 226 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--E---VLEQVERGYRMPCP---Q- 226 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCC---c-
Confidence 21 1122345678999999988889999999999999999999 88897643321 1 11111111111111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||++||++||+++++++.|++
T Consensus 227 --~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 227 --GCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --ccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 223467889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=325.97 Aligned_cols=259 Identities=17% Similarity=0.259 Sum_probs=198.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|+. .+++.||+|+++.... ......+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc---CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 5688999999999999999965 4688999999865432 22345678899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++ ++.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 156 (309)
T cd07872 83 FEYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSV 156 (309)
T ss_pred EeCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence 999975 7888776542 3478889999999999999999999 999999999999999999999999999986544
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh-------------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN------------- 983 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~------------- 983 (1031)
.........++..|+|||++.+ ..++.++||||+||++|||+||+.||....... ..........
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 157 PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLGTPTEETWPGISSN 235 (309)
T ss_pred CccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhhcch
Confidence 3333344567899999998865 457899999999999999999999986543311 0000000000
Q ss_pred -hhcCCCCCCC-C----hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 -QNLDHRLPTP-S----RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 -~~~~~~~~~~-~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.. . ........++.+++.+|++.||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 236 DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000000 0 000011235678999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=333.70 Aligned_cols=257 Identities=25% Similarity=0.375 Sum_probs=201.8
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~ 831 (1031)
++|.+.++||+|+||.||+|++. .++.||||+++.... ....+.+.+|+.++.++. ||||+++++++...
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR---SSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC---hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 56888899999999999999753 346899999976431 123457889999999997 99999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc--------------------------------------------------------
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA-------------------------------------------------------- 855 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 855 (1031)
+..++|+||+++|+|.++++....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 999999999999999999864321
Q ss_pred ---------------------------------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 856 ---------------------------------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 856 ---------------------------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
...+++..+..++.|++.||+|||+. +++||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceE
Confidence 12356778899999999999999998 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||+++....... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~ 350 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ 350 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence 999999999999999986532221 1123456788999999988889999999999999999998 8899765432111
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. ..+........+.. ....+.+++.+||+.+|.+||+++||++.|++
T Consensus 351 -~~---~~~~~~~~~~~p~~------~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 351 -FY---NAIKRGYRMAKPAH------ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred -HH---HHHHcCCCCCCCCC------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 11 11111111111111 12467889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-35 Score=321.96 Aligned_cols=262 Identities=20% Similarity=0.345 Sum_probs=199.8
Q ss_pred hccCccceeecCCCccEEEEEeCC---------------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS---------------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~ 823 (1031)
++|++.+.||+|+||.||+|.... ...||+|+++.... ....+.|.+|++++++++|||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT---KTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC---HHHHHHHHHHHHHHHhCCCCCcCe
Confidence 578899999999999999985432 23589999875421 223567899999999999999999
Q ss_pred eeeeEecCCeeEEEEEeccCCCchhhcccCCc---------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCC
Q 043316 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAA---------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894 (1031)
Q Consensus 824 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 894 (1031)
+++++...+..++||||+++++|.+++..... ...+++..++.++.|++.|++|||+. +++||||||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ 158 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATR 158 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChh
Confidence 99999999999999999999999999864321 12367889999999999999999999 9999999999
Q ss_pred CeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh--CCCCCCCcCc
Q 043316 895 NVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK--GNHPRDYVST 970 (1031)
Q Consensus 895 NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt--G~~P~~~~~~ 970 (1031)
||+++.++.+||+|||++......... .....++..|+|||+..++.++.++|||||||++|||++ |..||.....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 999999999999999999765332211 122344678999999988889999999999999999998 5567654332
Q ss_pred cchhhhhhHHHhhhhc-CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 971 NFSSFSNMITEINQNL-DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 971 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
. ............. ......... .....+.+++.+||+.||++||++.+|++.|++
T Consensus 239 ~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 E--QVIENTGEFFRNQGRQIYLSQTP---LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred H--HHHHHHHHhhhhccccccCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1 1111111100000 000000000 112368899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=317.92 Aligned_cols=255 Identities=23% Similarity=0.394 Sum_probs=201.6
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
.+|...++||+|+||.||+|.. .++..+|+|.+.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS----ESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC----HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 4677888999999999999953 246689999876532 234568999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
..++||||+++++|.+++..... ...+++..++.++.|++.|++|||+. +++||||||+||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcC
Confidence 99999999999999999975432 13478899999999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhh
Q 043316 901 EHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 901 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~ 977 (1031)
++.+||+|||++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~--- 232 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--E--- 232 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--H---
Confidence 99999999999976533221 1122334678999999998899999999999999999998 89897543321 1
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.............+. .....+.+++.+||+.||.+||+++||.+.|++
T Consensus 233 ~~~~~~~~~~~~~~~------~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 233 AIECITQGRELERPR------TCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHHcCccCCCCC------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 111111111111111 112357789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=313.97 Aligned_cols=254 Identities=24% Similarity=0.452 Sum_probs=206.2
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|.+.++||+|+||.||+|...+++.||||.+.... ...+++.+|+.++++++||||+++++++......++|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-----cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence 36789999999999999999988788899999987543 2456789999999999999999999999998999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.....
T Consensus 80 ~e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 80 TEYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred EeccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 99999999999997653 24578999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... .......+..|+|||.+.+..++.++||||+|+++||+++ |+.||..... ......+........+..
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~-- 228 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-----REVLEQVERGYRMPRPPN-- 228 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCC--
Confidence 211 1122334578999999998889999999999999999999 9999754322 111122222111111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+.+++.+|++.+|++||+++|+.+.|+.
T Consensus 229 ----~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 229 ----CPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----CCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 12367889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=320.68 Aligned_cols=255 Identities=23% Similarity=0.365 Sum_probs=200.1
Q ss_pred ccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
+|++.+.||+|+||.||+|... ....+|+|.+..... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS---SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC---HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCC
Confidence 4678889999999999999642 235788888865432 2235678999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCC---------------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCC
Q 043316 834 SFIVSEYLDRGSLTTILKDDA---------------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDIS 892 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 892 (1031)
.++|+||+++++|.+++.... ....+++.+++.++.|++.|++|||+. +|+|||||
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dik 154 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLA 154 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhh
Confidence 999999999999999986421 113478899999999999999999999 99999999
Q ss_pred CCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcC
Q 043316 893 SKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVS 969 (1031)
Q Consensus 893 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~ 969 (1031)
|+||+++.++.+||+|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999865332221 122345678999999988889999999999999999998 999975433
Q ss_pred ccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 970 TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
. .... ...........+. .....+.+++.+|++.+|++||+++|+++.|++
T Consensus 235 ~--~~~~---~~~~~~~~~~~~~------~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~ 285 (290)
T cd05045 235 P--ERLF---NLLKTGYRMERPE------NCSEEMYNLMLTCWKQEPDKRPTFADISKELEK 285 (290)
T ss_pred H--HHHH---HHHhCCCCCCCCC------CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 2 1111 1111111111111 112367789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=316.84 Aligned_cols=257 Identities=23% Similarity=0.349 Sum_probs=201.4
Q ss_pred HhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
.++|.+.+.||+|++|.||+|... .+..||+|.+..... ......|.+|+.++++++|+||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS---EQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 356889999999999999999654 457899998764321 22356789999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc----cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ce
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA----AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EA 904 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~ 904 (1031)
+..++||||+++++|.+++..... ...+++.++.+++.||+.|++|||+. +++||||||+||+++.++ .+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcce
Confidence 999999999999999999865431 13588999999999999999999999 999999999999998765 59
Q ss_pred EEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHH
Q 043316 905 HVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~ 981 (1031)
||+|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||+..... .....+
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~~-- 234 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEFV-- 234 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH--
Confidence 99999999876322111 112233568999999998889999999999999999997 99998644321 111111
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
........+. .....+.+++.+|++.+|++||++.||++.|++
T Consensus 235 -~~~~~~~~~~------~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 235 -TGGGRLDPPK------GCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred -HcCCcCCCCC------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1111111111 112367789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=313.85 Aligned_cols=249 Identities=27% Similarity=0.405 Sum_probs=203.5
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|+..+.||+|+||.||+|... +++.||+|.+.... ..+.+.+|++++++++||||+++++++.++...+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE------DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 56888899999999999999765 48999999986542 267899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 77 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 77 MEYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred EecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999999986533 3578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........++..|+|||++.+..++.++||||||+++|+|++|+.||........ ............. ..
T Consensus 152 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~----~~ 222 (256)
T cd06612 152 TMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-----IFMIPNKPPPTLS----DP 222 (256)
T ss_pred CccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-----hhhhccCCCCCCC----ch
Confidence 33333445678899999999988899999999999999999999999875433110 0111111111111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 223 EKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 122246788999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=319.08 Aligned_cols=253 Identities=21% Similarity=0.313 Sum_probs=200.0
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|+..+.||+|+||.||+|.. .+++.||||.+...... .....+.+.+|+.++++++|++++++++.+.+.+..++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 67778999999999999954 57899999998764322 22234567889999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++++|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 999999999986533 23578899999999999999999998 99999999999999999999999999997654322
Q ss_pred CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
......|+..|+|||++.+..++.++||||+||++|||++|+.||......... ..............+. .
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~------~ 227 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR--EEVERLVKEVQEEYSE------K 227 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH--HHHHhhhhhhhhhcCc------c
Confidence 223457899999999999889999999999999999999999998754321100 0111111111111111 1
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 1000 KLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
....+.+++.+||+.||++||| ++|+++
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 1235678899999999999999 888875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=317.99 Aligned_cols=252 Identities=26% Similarity=0.365 Sum_probs=199.5
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.+++.++||||+++++++..++..++|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 4677888999999999999954 578999999986542 12345678999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++++|.+++.... .+++.+++.++.|++.|++|||+. |++|+||||+||+++.++.++|+|||.+.....
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 85 MEFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred EeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 99999999999987543 478899999999999999999999 999999999999999999999999999986644
Q ss_pred CCCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.........|+..|+|||++. .+.++.++||||+||++|||++|+.||.......... .. .. .....+...
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~~-~~-~~~~~~~~~--- 232 (267)
T cd06645 159 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LM-TK-SNFQPPKLK--- 232 (267)
T ss_pred cccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH-hh-hc-cCCCCCccc---
Confidence 333334567899999999874 4568889999999999999999999975433211110 00 00 000111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........+.+++.+|++.+|++||+++++++
T Consensus 233 -~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 -DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 11112235778999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=324.86 Aligned_cols=195 Identities=21% Similarity=0.344 Sum_probs=160.2
Q ss_pred cceeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--CCeeEEEE
Q 043316 764 KYCIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--AQHSFIVS 838 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 838 (1031)
+++||+|+||+||+|+.. +++.||+|++.... ....+.+|+.++++++||||+++++++.. +...++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC------CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 457999999999999653 56899999986532 23456789999999999999999999854 45689999
Q ss_pred EeccCCCchhhcccCC------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee----CCCCceEEec
Q 043316 839 EYLDRGSLTTILKDDA------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL----DSEHEAHVSD 908 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~D 908 (1031)
||++ ++|.+++.... ....+++..+..++.||+.||+|||+. ||+||||||+||++ +.++.+||+|
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 9986 47877765321 123578899999999999999999999 99999999999999 4567899999
Q ss_pred cccccccCCCCC---CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCc
Q 043316 909 FGIAKFLNPHSS---NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYV 968 (1031)
Q Consensus 909 fg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~ 968 (1031)
||+++....... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 999987643221 23346789999999998764 5889999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=321.89 Aligned_cols=256 Identities=22% Similarity=0.379 Sum_probs=202.8
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~ 831 (1031)
++|.+.+.||+|+||.||+|.. .++..||||+++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH---SSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC---hHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 5789999999999999999953 2356899999865431 22356789999999999 799999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
+..++||||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.++++|||+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999975432 3378999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 912 AKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 912 a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
+......... .....++..|+|||.+.++.++.++||||+||++|||++ |+.||....... ..... .......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~---~~~~~~~ 263 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKL---IKEGYRM 263 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHH---HHcCCcC
Confidence 9865432211 112345678999999988889999999999999999998 999976443311 11111 1111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..+. ....++.+++.+|++++|++|||+.|+++.|++
T Consensus 264 ~~~~------~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 264 AQPE------HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCCC------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 1111 112367889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=319.84 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=198.7
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC---
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA--- 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~--- 831 (1031)
+.+.|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.++.++ +||||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 456688888999999999999954 568999999986532 2356778999999998 699999999998653
Q ss_pred ---CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 832 ---QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 832 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
...++||||+++++|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.++|+|
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 46899999999999999987643 24578899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||++..............|+..|+|||++. +..++.++||||+||++|||++|+.||......... ....
T Consensus 155 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-----~~~~ 229 (272)
T cd06637 155 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-----FLIP 229 (272)
T ss_pred CCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-----HHHh
Confidence 999987644333344567899999999986 335788999999999999999999998644321111 1111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... . .....+.+++.+||+.||.+|||+.|+++
T Consensus 230 ~~~~~~~~~--~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 RNPAPRLKS--K---KWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCCCCCCCC--C---CcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 111111111 0 12235788999999999999999999975
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=319.40 Aligned_cols=258 Identities=22% Similarity=0.333 Sum_probs=197.6
Q ss_pred CccceeecCCCccEEEEE-----eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--Cee
Q 043316 762 GEKYCIGKGRQGSVYKAE-----LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHS 834 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~ 834 (1031)
...+.||+|+||+||.+. ..+++.||+|.++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG---QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 788899999999998763 24678999999865421 12456788999999999999999999988653 467
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++... .+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 84 ~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 8999999999999999753 389999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH------HHhhhh
Q 043316 915 LNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI------TEINQN 985 (1031)
Q Consensus 915 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~------~~~~~~ 985 (1031)
....... .....++..|+|||.+.+..++.++||||||+++|||+||+.||.............. ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 6432221 1122346679999999888899999999999999999999999765433211111000 000000
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......... ......++.+++.+||+.||++|||++++++.|++
T Consensus 237 ~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 237 LERGMRLPC--PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE 280 (283)
T ss_pred hhcCCCCCC--CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 000000000 01122468889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=320.40 Aligned_cols=254 Identities=25% Similarity=0.385 Sum_probs=197.8
Q ss_pred hccCccceeecCCCccEEEEEeC-CC--cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~--~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||.||+|... ++ ..+++|.++... .....+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA---SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC---CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 46888999999999999999654 33 357888876422 122356789999999999 799999999999999999
Q ss_pred EEEEEeccCCCchhhcccCC-------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 835 FIVSEYLDRGSLTTILKDDA-------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
++|+||+++++|.+++.... ....+++..++.++.|++.|++|||+. ||+||||||+||+++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~ 155 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGEN 155 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCC
Confidence 99999999999999996532 113478899999999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHH
Q 043316 902 HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 980 (1031)
+.+||+|||++....... .......+..|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 156 ~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-----~~~~ 229 (297)
T cd05089 156 LASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-----ELYE 229 (297)
T ss_pred CeEEECCcCCCcccccee-ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHH
Confidence 999999999987432111 1111223567999999988889999999999999999997 99998644321 1111
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..........+. .....+.+++.+||+.+|.+||+++++++.|+
T Consensus 230 ~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 230 KLPQGYRMEKPR------NCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHhcCCCCCCCC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111111111 11235778999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=314.86 Aligned_cols=255 Identities=22% Similarity=0.366 Sum_probs=195.9
Q ss_pred cCccceeecCCCccEEEEEeCC-Cc--EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------
Q 043316 761 FGEKYCIGKGRQGSVYKAELPS-GI--IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------ 831 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 831 (1031)
|.+++.||+|+||.||+|...+ ++ .||+|.++.... .....+.+.+|+.++++++||||+++++++...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC--TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCC
Confidence 3467889999999999996643 33 699998865432 223467889999999999999999999987432
Q ss_pred CeeEEEEEeccCCCchhhcccCC---ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDA---AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
...++++||+++|+|.+++.... ....+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECC
Confidence 25689999999999998874321 223478999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhh
Q 043316 909 FGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 909 fg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
||+++........ .....+++.|+|||...+..++.++|||||||++|||++ |+.||...... ... ......
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~---~~~~~~ 230 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIY---DYLRQG 230 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHH---HHHHcC
Confidence 9999876433221 122345678999999998889999999999999999999 78887643321 111 111111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+. .....+.+++.+||+.||++|||+.|+++.|++
T Consensus 231 ~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 231 NRLKQPP------DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CCCCCCC------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 1111111 112357889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=319.96 Aligned_cols=263 Identities=22% Similarity=0.361 Sum_probs=202.4
Q ss_pred hccCccceeecCCCccEEEEEeCC-----------------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCce
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS-----------------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni 821 (1031)
.+|++.+.||+|+||.||+|.... +..||+|++..... ....+.+.+|++++++++||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS---DNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC---HHHHHHHHHHHHHHHhcCCCCE
Confidence 578899999999999999986532 24689999876432 2346788999999999999999
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhhcccCCc--------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCC
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAA--------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISS 893 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 893 (1031)
+++++++..++..++|+||+++++|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp 158 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccch
Confidence 9999999999999999999999999999876431 12578999999999999999999999 999999999
Q ss_pred CCeeeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh--CCCCCCCcC
Q 043316 894 KNVLLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK--GNHPRDYVS 969 (1031)
Q Consensus 894 ~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt--G~~P~~~~~ 969 (1031)
+||+++.++.++|+|||++........ ......++..|+|||.+.++.++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 999999999999999999986533221 1223445778999999988889999999999999999998 667765433
Q ss_pred ccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 970 TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
... .+... ............... ......++.+++.+|++.||++|||+.||++.|++
T Consensus 239 ~~~-~~~~~-~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 DQQ-VIENA-GHFFRDDGRQIYLPR--PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred hHH-HHHHH-HhccccccccccCCC--ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 211 11111 111000000000000 00112368899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=314.23 Aligned_cols=255 Identities=23% Similarity=0.389 Sum_probs=199.7
Q ss_pred cCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe---
Q 043316 761 FGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH--- 833 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~--- 833 (1031)
|.+.+.||+|+||.||+|... .+..||+|+++.... .....+.+.+|+..++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH--TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 567788999999999999653 247899999875432 12345678999999999999999999998866554
Q ss_pred ---eEEEEEeccCCCchhhcccCC---ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEe
Q 043316 834 ---SFIVSEYLDRGSLTTILKDDA---AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVS 907 (1031)
Q Consensus 834 ---~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 907 (1031)
.++|+||+++++|..++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEEC
Confidence 799999999999999985432 223578899999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhh
Q 043316 908 DFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 984 (1031)
|||.++........ .....++..|+|||.+.+..++.++||||+||++|||++ |..||...... ........
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----~~~~~~~~ 230 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-----EIYDYLRH 230 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHc
Confidence 99999876433221 112334678999999988889999999999999999999 88887654321 11111111
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......+. ....++.+++.+||+.||++|||+.|+++.|++
T Consensus 231 ~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 231 GNRLKQPE------DCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred CCCCCCCc------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11111111 123467889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=311.14 Aligned_cols=248 Identities=25% Similarity=0.420 Sum_probs=199.5
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeE-ecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC-SNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~-~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|.. .++.||+|.++... ..+.+.+|+.++++++|++++++++++ .+++..++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc------hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 5788899999999999999976 58889999986432 356788999999999999999999976 455678999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++++|.++++.... ..+++..+..++.|++.|++|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred EECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 999999999999976432 3478899999999999999999999 999999999999999999999999999886533
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ....++..|+|||++.+..++.++||||+||++|||++ |+.||..... ......+........+.
T Consensus 155 ~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~---- 222 (256)
T cd05082 155 TQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAPD---- 222 (256)
T ss_pred cC---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCCC----
Confidence 22 22344678999999988889999999999999999998 9999764322 11111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+|++.+|++|||++++++.|++
T Consensus 223 --~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 223 --GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred --CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 112367788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=313.12 Aligned_cols=254 Identities=27% Similarity=0.475 Sum_probs=202.2
Q ss_pred hccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.+|.+.+.||+|+||.||+|... .+..+|+|.++.... ....+.+.+|+.++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT---EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 56888999999999999999653 234799999865432 12356889999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 99999999999999997653 3578899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCce---eeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSNWT---AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
......... ...++..|+|||.+.++.++.++||||||+++||+++ |+.||...... .....+.... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-----~~~~~~~~~~--~~ 228 (267)
T cd05066 156 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-----DVIKAIEEGY--RL 228 (267)
T ss_pred cccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-----HHHHHHhCCC--cC
Confidence 644322111 1223568999999998889999999999999999887 99997644321 1111111111 11
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+... .....+.+++.+|++.+|.+||++.++++.|++
T Consensus 229 ~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 229 PAPM----DCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred CCCC----CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 1111 122356789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=317.67 Aligned_cols=257 Identities=21% Similarity=0.334 Sum_probs=200.9
Q ss_pred HhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
.++|++.++||+|+||.||+|... .+..||+|.+.... .......+.+|+.++++++||||+++++++.+.
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 467999999999999999999542 25589999886542 122345688999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc-------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA-------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
...++||||+++|+|.++++.... ....++..+..++.|++.|++|||++ +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 999999999999999999975321 23456778899999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHH
Q 043316 905 HVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~ 981 (1031)
+|+|||+++........ .....++..|+|||.+.++.++.++||||+||++|||++ |+.||...... .....
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~~~~ 233 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QVLKF 233 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 99999999865332221 112334678999999988889999999999999999998 78887543321 11111
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.........+. .....+.+++.+|++.||++|||+.|+++.+++
T Consensus 234 ~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 234 VMDGGYLDQPD------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred HHcCCCCCCCC------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 11111111111 112368889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=320.47 Aligned_cols=257 Identities=24% Similarity=0.381 Sum_probs=203.0
Q ss_pred HhccCccceeecCCCccEEEEEe--------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFC 828 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 828 (1031)
.++|.+.+.||+|+||.||+|+. .++..||+|.+.... .....+.+.+|+.+++.+ +||||+++++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc---chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 46788999999999999999953 134579999986542 123456789999999999 799999999999
Q ss_pred ecCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCC
Q 043316 829 SNAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKN 895 (1031)
Q Consensus 829 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 895 (1031)
...+..++||||+++++|.+++..... ...+++.++..++.||+.|++|||+. |++||||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccce
Confidence 999999999999999999999975421 23578889999999999999999999 99999999999
Q ss_pred eeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccc
Q 043316 896 VLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNF 972 (1031)
Q Consensus 896 Ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~ 972 (1031)
|+++.++.+||+|||.++........ .....+++.|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-- 245 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-- 245 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--
Confidence 99999999999999999876432221 122345678999999988889999999999999999998 7788654322
Q ss_pred hhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 973 SSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......+........+. .....+.+++.+||+.+|++|||+.|+++.|++
T Consensus 246 ---~~~~~~~~~~~~~~~~~------~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 246 ---EELFKLLKEGHRMDKPA------NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred ---HHHHHHHHcCCcCCCCC------CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 11112221111111111 223467789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=333.93 Aligned_cols=252 Identities=21% Similarity=0.268 Sum_probs=195.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|+..+.||+|+||.||+|.. .+++.||+|+++..... .....+.+.+|+.++.+++||+|+++++++.+++..++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADML-EKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 3688899999999999999955 57899999999754322 223456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 80 MEFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred EeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999997643 478899999999999999999999 999999999999999999999999999875422
Q ss_pred CCC-----------------------------------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCC
Q 043316 918 HSS-----------------------------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN 962 (1031)
Q Consensus 918 ~~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~ 962 (1031)
... .....+||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 100 011346899999999999999999999999999999999999
Q ss_pred CCCCCcCccchhhhhhHHHhhhh-cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCC---HHHHHH
Q 043316 963 HPRDYVSTNFSSFSNMITEINQN-LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT---MKKVCN 1027 (1031)
Q Consensus 963 ~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~ 1027 (1031)
.||...... .. ...+... ....++... . ...+..+++.+|+. ||.+|++ +.|+++
T Consensus 234 ~Pf~~~~~~--~~---~~~i~~~~~~~~~p~~~-~---~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 234 PPFCSETPQ--ET---YRKVMNWKETLVFPPEV-P---ISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCCCHH--HH---HHHHHcCCCceecCCCC-C---CCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 998654331 11 1111110 001111110 0 11245566777664 9999985 566653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=316.44 Aligned_cols=249 Identities=24% Similarity=0.335 Sum_probs=197.5
Q ss_pred ccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|+||.||+|. ..+++.||+|++.... .......+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 57788899999999999995 4578999999986542 1223567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|..+. .+++..+..++.|++.|++|||+. ||+|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 79 EFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred ecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 999999986542 356788899999999999999999 9999999999999999999999999999865432
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh--hhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS--FSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
......++..|+|||++.+..++.++||||+||++|+|++|+.||......... ................+..
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 223 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVG--- 223 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCC---
Confidence 234457899999999999888999999999999999999999998643321111 1111111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
....++.+++.+|++.||++||+++|+++.
T Consensus 224 --~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 224 --QFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred --cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 112357789999999999999999998753
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=321.51 Aligned_cols=256 Identities=24% Similarity=0.366 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEeC--------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
++|.+.+.||+|+||.||+|+.. +...+|+|.++.... ....+.+.+|+++++.+ +||||+++++++.
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT---EKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC---hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 57999999999999999999642 235799999875421 23456788999999999 7999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
..+..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. |++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 99999999999999999999975421 13478899999999999999999998 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCCc--eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||.+.......... ....++..|+|||++.+..++.++||||+||++|||++ |+.||..... .
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--~ 249 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--E 249 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--H
Confidence 99999999999999998654221111 11223568999999988889999999999999999998 8888754322 1
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
... ..+........+. ....++.+++.+||+.+|++|||+.|+++.|++
T Consensus 250 ~~~---~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~ 298 (307)
T cd05098 250 ELF---KLLKEGHRMDKPS------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 298 (307)
T ss_pred HHH---HHHHcCCCCCCCC------cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 111 1111111111111 112367788999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=310.07 Aligned_cols=246 Identities=24% Similarity=0.390 Sum_probs=193.2
Q ss_pred eeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 766 CIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
.||+|+||.||+|.+. ++..||+|++.... .....+.+.+|+.++++++||||+++++++.. ...++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN---EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc---ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 3899999999999543 35679999986542 12345678999999999999999999998864 56799999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+++|.+++.... ..+++.++++++.|++.|++|||++ |++||||||+||+++.++.+||+|||.+..........
T Consensus 78 ~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 78 GGPLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred CCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence 999999987532 3578999999999999999999999 99999999999999999999999999998654332211
Q ss_pred ---eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 923 ---TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 923 ---~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
....++..|+|||.+.+..++.++|||||||++||+++ |+.||...... .. ...+........+.
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~---~~~~~~~~~~~~~~------ 221 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EV---MSFIEQGKRLDCPA------ 221 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HH---HHHHHCCCCCCCCC------
Confidence 11223578999999988889999999999999999996 99998654331 11 11111111111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....++.+++.+||+.||++||++.+|.+.|++
T Consensus 222 ~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 222 ECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 112367789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=318.65 Aligned_cols=251 Identities=23% Similarity=0.337 Sum_probs=200.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|++.++||+|+||.||+|+. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 5688889999999999999965 458999999986542 23467788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++++++..++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.....
T Consensus 88 ~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 88 IEFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred EecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 99999999988876532 3478899999999999999999999 999999999999999999999999999876543
Q ss_pred CCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.........++..|+|||++. ...++.++||||+||++|||++|+.||...... ...........+....
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 237 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLKIAKSEPPTLSQ 237 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-----HHHHHHhcCCCccCCC
Confidence 333334566889999999884 345678999999999999999999997643321 1111111111111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. .....++.+++.+||+.||++||++.|+++
T Consensus 238 ~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 238 P----SKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred C----cccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1 112235778999999999999999999975
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=331.10 Aligned_cols=258 Identities=21% Similarity=0.275 Sum_probs=196.5
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-----e
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ-----H 833 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~-----~ 833 (1031)
+|++.+.||+|+||.||+|.. .+++.||||++.... .+....+.+.+|+.+++.++||||+++++++.... .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF--QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc--cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccce
Confidence 478889999999999999964 579999999986532 22234567889999999999999999999998776 7
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+|+||+. ++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEEEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecccccee
Confidence 899999996 5787777553 3588899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhh-------------
Q 043316 914 FLNPHS-SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM------------- 978 (1031)
Q Consensus 914 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~------------- 978 (1031)
...... .......++..|+|||++.+. .++.++||||+||++|||++|+.||....... .....
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 152 VEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMR 230 (372)
T ss_pred ecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHH
Confidence 654332 223345678999999998774 47899999999999999999999987543211 00000
Q ss_pred --HHHhhhhc---CCCCCCCC---hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 979 --ITEINQNL---DHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 979 --~~~~~~~~---~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ ....+... ........++.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00000000 00000000 000011235778999999999999999999985
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=308.49 Aligned_cols=246 Identities=24% Similarity=0.382 Sum_probs=197.8
Q ss_pred eeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCC
Q 043316 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 845 (1031)
+||+|+||.||+|...+++.+|+|++..... ......+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP---QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC---HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 6899999999999887899999999865432 1234578899999999999999999999999999999999999999
Q ss_pred chhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC-cee
Q 043316 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-WTA 924 (1031)
Q Consensus 846 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~ 924 (1031)
|.+++.... ..+++..+..++.|++.++.|+|+. |++||||||+||+++.++.+||+|||++......... ...
T Consensus 79 L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 79 FLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 999987543 3578899999999999999999999 9999999999999999999999999999754322111 112
Q ss_pred eccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHH
Q 043316 925 FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003 (1031)
Q Consensus 925 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1031)
..++..|+|||++.++.++.++||||||+++||+++ |..||...... ..............+. .....
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~ 222 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-----QAREQVEKGYRMSCPQ------KCPDD 222 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcCCCCCCCC------CCCHH
Confidence 234567999999988889999999999999999998 99997644321 1111111111111111 12246
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 1004 IMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 1004 l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.+++.+|++.+|++||++.|+.+.|+
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=311.49 Aligned_cols=249 Identities=24% Similarity=0.418 Sum_probs=202.4
Q ss_pred ceeecCCCccEEEEEeCC----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEe
Q 043316 765 YCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
+.||+|+||.||+|.... +..||+|++...... ...+.+.+|++.++.++|+||+++++++.+.+..++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE---EERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch---hHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEe
Confidence 368999999999996643 889999998765421 1467889999999999999999999999999999999999
Q ss_pred ccCCCchhhcccCCc------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 841 LDRGSLTTILKDDAA------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+++++|.+++..... ...+++.+++.++.|++.|++|||++ +++||||||+||+++.++.++|+|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccc
Confidence 999999999987521 25689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 915 LNPHS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 915 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
..... .......++..|+|||.+.+..++.++||||+|+++|||++ |..||..... . ..............+
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~---~~~~~~~~~~~~~~~ 229 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--E---EVLEYLRKGYRLPKP 229 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--H---HHHHHHHcCCCCCCC
Confidence 65432 12234556889999999988889999999999999999999 6999875532 1 112222211111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. ....++.+++.+|++.+|++|||+.|+++.|+
T Consensus 230 ~------~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 230 E------YCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred c------cCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1 11346788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=315.25 Aligned_cols=252 Identities=22% Similarity=0.390 Sum_probs=196.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCc----EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
++|++.+.||+|+||+||+|.+ .+++ .+++|.+.... ......++..|+..+++++||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS---GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc---chHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Cc
Confidence 4688889999999999999965 3454 47778775322 12234677888889999999999999998754 45
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++++||+++|+|.+++.... ..+++..+..++.||+.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccce
Confidence 789999999999999997543 3578999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
...+... ......++..|+|||.+.++.++.++|||||||++||+++ |+.||...... .....+.... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~---~~~~ 232 (279)
T cd05111 158 LLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEKGE---RLAQ 232 (279)
T ss_pred eccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCC---cCCC
Confidence 7643322 1233456778999999988899999999999999999998 99997654321 1111111111 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. ....+.+++.+||..||++|||+.|+.+.|+
T Consensus 233 ~~~------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~ 266 (279)
T cd05111 233 PQI------CTIDVYMVMVKCWMIDENVRPTFKELANEFT 266 (279)
T ss_pred CCC------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111 1235677889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=320.32 Aligned_cols=256 Identities=23% Similarity=0.389 Sum_probs=200.6
Q ss_pred hccCccceeecCCCccEEEEEeC--------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
++|.+.++||+|+||.||+|+.. ....+|+|+++.... ....+.+.+|+++++++ +||||+++++++.
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT---DKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC---hHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 57889999999999999999531 245799999875431 23456788999999999 5999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+.+..++||||+++|+|.+++..... ...+++.++.+++.|++.||+|||++ |++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 99999999999999999999965321 23578899999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCCc--eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||.++......... ....++..|+|||++.++.++.++||||+||++|||++ |..||..... .
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~ 243 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--E 243 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--H
Confidence 99999999999999998664322211 12233467999999988889999999999999999999 8888754332 1
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
. .............+. ....++.+++.+|++.||++|||+.|+++.|++
T Consensus 244 ~---~~~~~~~~~~~~~~~------~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 292 (314)
T cd05099 244 E---LFKLLREGHRMDKPS------NCTHELYMLMRECWHAVPTQRPTFKQLVEALDK 292 (314)
T ss_pred H---HHHHHHcCCCCCCCC------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 1 111111111111111 112356789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=321.73 Aligned_cols=254 Identities=24% Similarity=0.385 Sum_probs=197.5
Q ss_pred hccCccceeecCCCccEEEEEeC-CCc--EEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGI--IFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||.||+|... ++. .+|+|.++... .......+.+|++++.++ +||||+++++++.+++..
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC---CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 57888999999999999999653 454 46777765422 123456788999999999 899999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 835 FIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
++||||+++++|.++++.... ...+++.+++.++.|++.|++|||+. ||+||||||+||+++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 999999999999999965421 13578899999999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHH
Q 043316 902 HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 980 (1031)
+.+||+|||++....... ......++..|+|||.+.+..++.++|||||||++|||+| |..||...... . ...
T Consensus 161 ~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~---~~~ 234 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--E---LYE 234 (303)
T ss_pred CcEEeCccccCcccchhh-hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--H---HHH
Confidence 999999999986432111 1112234678999999988889999999999999999998 99997543321 1 111
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..........+. .....+.+++.+||+.+|++||++.++++.++
T Consensus 235 ~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 235 KLPQGYRLEKPL------NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred HHhcCCcCCCCC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111111111 11235778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=317.29 Aligned_cols=253 Identities=20% Similarity=0.278 Sum_probs=199.2
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|+..+.||+|+||+||+|.. .+++.||+|.+...... .....+.+.+|++++++++|++|+++.+++.+++..++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-KRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-hhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 66778899999999999955 57899999998664422 22234567889999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG- 155 (285)
T ss_pred eccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCC-
Confidence 999999998886543 23589999999999999999999999 9999999999999999999999999999765322
Q ss_pred CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||........ ...+...........+. .
T Consensus 156 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~------~ 227 (285)
T cd05632 156 ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK--REEVDRRVLETEEVYSA------K 227 (285)
T ss_pred CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhhhccccccCc------c
Confidence 222345789999999999888899999999999999999999999875432111 01111100111111111 1
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 1000 KLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
....+.+++.+|++.||++||+ +.|+++
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 228 FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 1235678899999999999999 666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=320.17 Aligned_cols=249 Identities=27% Similarity=0.421 Sum_probs=202.3
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+|+..+.||.|++|.||+|. ..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..+...++|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK----QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc----CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 458899999999999999995 4679999999986542 23456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++++|.+++... .+++.++..++.|++.|++|||+. |++||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 95 MEYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EEecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999999988643 478899999999999999999999 999999999999999999999999999887654
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........++..|+|||.+.+..++.++|||||||++|+|++|+.||........ ...............
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-----~~~~~~~~~~~~~~~---- 238 (296)
T cd06655 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LYLIATNGTPELQNP---- 238 (296)
T ss_pred ccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhcCCcccCCc----
Confidence 43333445688899999999888899999999999999999999999865443111 111111111111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+++.+||+.||++||++.+++.
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 112235778899999999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=317.14 Aligned_cols=257 Identities=22% Similarity=0.383 Sum_probs=202.7
Q ss_pred HhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
.++|++.+.||+|+||.||+|... ++..||+|++..... ......+.+|+.++++++||||+++++++.++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---ADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC---HHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 357889999999999999999653 568899999865432 22356788999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCC-------------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCC
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDA-------------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDIS 892 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 892 (1031)
...++|+||+++++|.+++.... ....+++.+++.++.|++.||+|||+. +++|||||
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~ 157 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLA 157 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccccc
Confidence 99999999999999999996431 112467889999999999999999999 99999999
Q ss_pred CCCeeeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcC
Q 043316 893 SKNVLLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVS 969 (1031)
Q Consensus 893 p~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~ 969 (1031)
|+||+++.++.++|+|||.+........ .......+..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 158 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 158 TRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred HhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999876533221 1122334678999999988899999999999999999997 888875332
Q ss_pred ccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 970 TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. ... ..+.. ......+. ....++.+++.+|++.||++|||+.|+++.|++
T Consensus 238 ~~--~~~---~~~~~---~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 HE--EVI---YYVRD---GNVLSCPD---NCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HH--HHH---HHHhc---CCCCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 21 111 11111 11111111 122467889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=312.36 Aligned_cols=249 Identities=27% Similarity=0.445 Sum_probs=199.3
Q ss_pred ceeecCCCccEEEEEeCC--C--cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEe
Q 043316 765 YCIGKGRQGSVYKAELPS--G--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
+.||+|++|.||+|.+.+ + ..||+|.+...... ...+.+.+|+.++++++||||+++++++.+ ...++|+||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEe
Confidence 368999999999996533 3 36999998775432 456789999999999999999999999988 889999999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
+++++|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 77 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 77 APLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred cCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccc
Confidence 999999999987543 4688999999999999999999999 999999999999999999999999999987654322
Q ss_pred C---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 921 N---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 921 ~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .....++..|+|||.+.+..++.++||||+||++|||++ |+.||...... .......... ...... .
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~-~~~~~~-~- 224 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-----QILKKIDKEG-ERLERP-E- 224 (257)
T ss_pred ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHhcC-CcCCCC-c-
Confidence 1 122446788999999988889999999999999999998 99997644321 1111111111 111111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+|++.+|++||+++|+++.|..
T Consensus 225 --~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 225 --ACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred --cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 122467889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=337.56 Aligned_cols=255 Identities=22% Similarity=0.259 Sum_probs=189.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------ 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 831 (1031)
.+|.+.++||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 5799999999999999999955 578999999885421 2235799999999999999999886432
Q ss_pred --CeeEEEEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEe
Q 043316 832 --QHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVS 907 (1031)
Q Consensus 832 --~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~ 907 (1031)
..+++||||+++ ++.+++... .....+++..++.++.||+.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 246799999975 676666532 1234588899999999999999999999 999999999999999765 69999
Q ss_pred ccccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh---
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN--- 983 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~--- 983 (1031)
|||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|..||...... ......+....
T Consensus 214 DFGla~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 214 DFGSAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPT 291 (440)
T ss_pred ccccchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCC
Confidence 999998764322 22345789999999998764 6899999999999999999999998654331 11111111000
Q ss_pred --------hh-cCCCCCCCC-hhHHH-----HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 --------QN-LDHRLPTPS-RDVMD-----KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 --------~~-~~~~~~~~~-~~~~~-----~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ....++... ..... ...++.+++.+||++||.+|||+.|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00 000111100 00000 1236789999999999999999999874
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=320.14 Aligned_cols=250 Identities=26% Similarity=0.389 Sum_probs=202.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
..+|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 36789999999999999999964 579999999986543 2235668899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+....
T Consensus 94 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 94 VMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred eecccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 99999999999998643 367889999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........+++.|+|||.+.+..++.++||||+||++|+|++|+.||........... ......+... .
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-----~~~~~~~~~~-~--- 237 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----IATNGTPELQ-N--- 237 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-----eccCCCCCCC-C---
Confidence 443333445688999999999988899999999999999999999999864432111000 0000000000 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++.+||+.||++||+++|+++
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 238 PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1112235678899999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=309.48 Aligned_cols=249 Identities=27% Similarity=0.426 Sum_probs=203.8
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|.. .++.||+|.+..... ..+++.+|+.++++++|+||+++++++.+....++||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 5688899999999999999977 488999999876431 4678899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.++++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 80 EYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999999976542 3588999999999999999999999 9999999999999999999999999999876322
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .....+..|+|||.+.++.++.++||||+|+++|||++ |+.||...... ..............+.
T Consensus 156 ~---~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~----- 222 (256)
T cd05039 156 Q---DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPHVEKGYRMEAPE----- 222 (256)
T ss_pred c---ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHhcCCCCCCcc-----
Confidence 1 22334678999999988889999999999999999997 99997644321 1111111111111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+|+..+|++|||+.|++++|++
T Consensus 223 -~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 223 -GCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred -CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 112467889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=327.12 Aligned_cols=257 Identities=22% Similarity=0.362 Sum_probs=198.6
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec-
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN- 830 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~- 830 (1031)
++|++.+.||+|+||.||+|.. .+++.||||+++.... ......+.+|+.++.++ +||||+++++++..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC---hHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 5789999999999999999953 3578999999875432 22356788999999999 68999999998865
Q ss_pred CCeeEEEEEeccCCCchhhcccCCc-------------------------------------------------------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAA------------------------------------------------------- 855 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 855 (1031)
+...++||||+++|+|.+++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 4567899999999999999864210
Q ss_pred ---------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC--cee
Q 043316 856 ---------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTA 924 (1031)
Q Consensus 856 ---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~ 924 (1031)
...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++......... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 12367888899999999999999999 9999999999999999999999999999865332211 122
Q ss_pred eccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHH
Q 043316 925 FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003 (1031)
Q Consensus 925 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1031)
..++..|+|||.+.+..++.++||||+|+++|||++ |..||........ .. ...........+.. ...+
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~---~~~~~~~~~~~~~~------~~~~ 310 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC---RRLKEGTRMRAPDY------TTPE 310 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HH---HHHhccCCCCCCCC------CCHH
Confidence 335678999999988889999999999999999997 8999765432211 11 11111111111111 1125
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 1004 IMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 1004 l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.+++.+||+.||++|||+.||++.|++
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~~ 338 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLGN 338 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 7788999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=317.19 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=197.6
Q ss_pred cCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|++.+.||+|+||.||+|... ++..+|+|.+.... ....+.+.+|+++++.++||||+++++++..++..++|+|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS----EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC----HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 567788999999999999654 57889999886532 2346678899999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 83 FCAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred ecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc
Confidence 999999998876532 3588999999999999999999999 99999999999999999999999999997654333
Q ss_pred CCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 920 SNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.......++..|+|||++. +..++.++||||+||++|||++|+.||...... . ...............+
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~-~~~~~~~~~~~~~~~~- 231 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM----R-VLLKIAKSEPPTLAQP- 231 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH----H-HHHHHhhcCCCCCCCc-
Confidence 3334456889999999874 345778999999999999999999997644321 1 1111111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....++.+++.+||+.||.+||++.++++
T Consensus 232 ---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 232 ---SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ---cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112236788999999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=315.14 Aligned_cols=256 Identities=21% Similarity=0.318 Sum_probs=202.9
Q ss_pred HhccCccceeecCCCccEEEEEeCC-----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-C
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPS-----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN-A 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-~ 831 (1031)
.++|.+.+.||+|+||.||+|...+ +..|++|++.... .....+.+.+|+.++++++||||+++++++.. +
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA---SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 4678889999999999999997654 6889999886432 23346778899999999999999999998766 5
Q ss_pred CeeEEEEEeccCCCchhhcccCCcc-----ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAA-----KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
...++++||+++++|.+++...... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEE
Confidence 7789999999999999998764322 4588999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhh
Q 043316 907 SDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
+|||+++.+.+.... .....++..|+|||++.+..++.++||||+||++||+++ |+.||..... ..+. ....
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~---~~~~ 233 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMA---AYLK 233 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHH---HHHH
Confidence 999999865432211 112335678999999988889999999999999999999 9999865432 1111 1111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.......+. .....+.+++.+||+.||++|||+.|+++.|+
T Consensus 234 ~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 234 DGYRLAQPI------NCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred cCCCCCCCC------cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111111111 11235788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=325.87 Aligned_cols=247 Identities=22% Similarity=0.368 Sum_probs=199.1
Q ss_pred cceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe--eEEEEEe
Q 043316 764 KYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH--SFIVSEY 840 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~ 840 (1031)
..+||+|+|-+||+| +..+|..||==.++.....+.+...++|..|+.+++.++|||||++|+++.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 346999999999999 4456777775445555555666778999999999999999999999999977654 7799999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEeccccccccCCCC
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~ 919 (1031)
+..|+|..|.++++ +.+.+.+.+|++||++||.|||++ .|+|+|||||-+||||+. .|.|||+|.|+|......
T Consensus 125 ~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s- 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS- 199 (632)
T ss_pred ccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc-
Confidence 99999999998865 478899999999999999999997 679999999999999985 689999999999987543
Q ss_pred CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
......|||.|||||++. ..|...+||||||++++||.|+.+||..-... ++..+++ -..+++.+-...+
T Consensus 200 -~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~----AQIYKKV----~SGiKP~sl~kV~ 269 (632)
T KOG0584|consen 200 -HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP----AQIYKKV----TSGIKPAALSKVK 269 (632)
T ss_pred -ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH----HHHHHHH----HcCCCHHHhhccC
Confidence 335589999999999987 58999999999999999999999997644432 1111221 1222211111111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 1000 KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..++.++|.+|+.. ..+|||+.|++.
T Consensus 270 -dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 270 -DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred -CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 23788999999999 999999999985
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=311.41 Aligned_cols=253 Identities=27% Similarity=0.375 Sum_probs=204.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.+|+|+||.||+|.. .+++.+|+|.+.... ....+.+.+|++++++++||||+++++++.++...+++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 5688899999999999999965 468899999987543 22467889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.....
T Consensus 79 ~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 79 MEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred EeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 99999999999987642 3578899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCcccccccccc---CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMM---RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.........++..|+|||.+.+. .++.++||||+|+++|||+||+.||.......... ........... .
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~----~~~~~~~~~~~---~ 226 (262)
T cd06613 154 TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF----LISKSNFPPPK---L 226 (262)
T ss_pred hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHhccCCCcc---c
Confidence 33333445678899999998776 78899999999999999999999986543211110 00011011110 1
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+.+++.+||+.+|.+|||+++|+.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111233456889999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=309.27 Aligned_cols=246 Identities=26% Similarity=0.407 Sum_probs=194.8
Q ss_pred ceeecCCCccEEEEEeC-C---CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEe
Q 043316 765 YCIGKGRQGSVYKAELP-S---GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
++||+|+||.||+|... . +..+|+|.+...... ...+++.+|++++++++||||+++++++.. ...++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA---AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEe
Confidence 36999999999999542 2 378999998765421 345678999999999999999999998764 467999999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.......
T Consensus 77 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 77 APLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred CCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 99999999998654 578899999999999999999999 999999999999999999999999999987644332
Q ss_pred Cce---eeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 921 NWT---AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 921 ~~~---~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
... ...++..|+|||...+..++.++|||||||++|||++ |+.||...... ... ..+........+.
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~---~~~~~~~~~~~~~---- 221 (257)
T cd05060 151 YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVI---AMLESGERLPRPE---- 221 (257)
T ss_pred ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHH---HHHHcCCcCCCCC----
Confidence 221 1223467999999988889999999999999999998 99998654321 111 1111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||+.+|++||++.++.+.|++
T Consensus 222 --~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 222 --ECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred --CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 112367889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=319.10 Aligned_cols=256 Identities=25% Similarity=0.356 Sum_probs=199.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .++..+|+|.+.... ......++.+|++++++++||||+++++++.+++..++|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEE
Confidence 3688999999999999999954 468889999886532 122356788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++.. ..+++..+..++.|++.||+|||+.+ +++||||||+||+++.++.+||+|||++.....
T Consensus 78 ~ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 78 MEHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred eeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 9999999999999764 35788999999999999999999732 899999999999999999999999999876532
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH----------------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE---------------- 981 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~---------------- 981 (1031)
. ......++..|+|||.+.+..++.++||||+||++|||++|+.||...... ........
T Consensus 153 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 228 (308)
T cd06615 153 S--MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSG 228 (308)
T ss_pred c--ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccC
Confidence 2 223456889999999998888999999999999999999999997533211 00000000
Q ss_pred --------------hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 982 --------------INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 982 --------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.........+..+.. ....++.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 229 HPPDSPRPMAIFELLDYIVNEPPPKLPSG--AFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCCCccchhhHHHHHHHHhcCCCccCcCc--ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000000000 122357899999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=323.45 Aligned_cols=255 Identities=23% Similarity=0.285 Sum_probs=195.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+. .+++.||+|++.+.... .....+.+.+|+.++..++|+||+++++++.+++..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEML-KRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence 4688999999999999999965 46899999998753321 223456688999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred EecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999997532 3578899999999999999999999 999999999999999999999999999976543
Q ss_pred CCCC-ceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc-CCCC
Q 043316 918 HSSN-WTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL-DHRL 990 (1031)
Q Consensus 918 ~~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~ 990 (1031)
.... .....||+.|+|||++.+ +.++.++||||+||++|||++|+.||...... .....+.... ...+
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~ 229 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ETYGKIMNHKEHFQF 229 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH-----HHHHHHHcCCCcccC
Confidence 3221 233568999999999863 45788999999999999999999998643321 1111111100 0111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCC--CCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPE--ARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~--~Rps~~evl~ 1027 (1031)
+.... .....+.+++.+|+..+++ .||+++++++
T Consensus 230 ~~~~~---~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 230 PPDVT---DVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred CCccC---CCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 11111 1223556777777755443 4889998875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=312.45 Aligned_cols=252 Identities=23% Similarity=0.353 Sum_probs=189.7
Q ss_pred eeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 766 CIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
.||+|+||.||+|... ++..+|+|.++.... ......+.+|+.++++++||||+++++++.+....++||||++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS---VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 5899999999999653 346799998865432 2234578899999999999999999999999999999999999
Q ss_pred CCCchhhcccCCc--cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 843 RGSLTTILKDDAA--AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 843 ~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
+|+|.++++.... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 9999999975432 22456778889999999999999999 999999999999999999999999999975432221
Q ss_pred --CceeeccccCcccccccccc-------CCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 921 --NWTAFAGTFGYAAPEIAHMM-------RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 921 --~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
......++..|+|||++.+. .++.++||||+|+++|||++ |+.||........ ....+. ......
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~----~~~~~~ 230 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVR----EQQLKL 230 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhh----cccCCC
Confidence 11234567889999988642 35789999999999999996 9999865433211 111111 111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.+... ......+.+++..|| .+|++|||++||++.|+
T Consensus 231 ~~~~~~-~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLK-LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccC-CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111100 011224567788898 58999999999999885
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=316.85 Aligned_cols=260 Identities=24% Similarity=0.397 Sum_probs=197.8
Q ss_pred hccCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--A 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~ 831 (1031)
.+|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST----AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 4678889999999999999963 357899999986542 2345678999999999999999999998754 3
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++|+||+++++|.+++.... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcc
Confidence 46899999999999999997542 3478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCc---eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhh-------hhhHHH
Q 043316 912 AKFLNPHSSNW---TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF-------SNMITE 981 (1031)
Q Consensus 912 a~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~-------~~~~~~ 981 (1031)
+.......... ....++..|+|||++.+..++.++||||+||++|||++|..|+.......... ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 155 TKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH 234 (284)
T ss_pred cccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH
Confidence 98764332211 11223456999999988889999999999999999999887754332211000 000000
Q ss_pred hhhhcC--CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 982 INQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 982 ~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...... ...+.. . .....+.+++.+||+.+|++|||++||++.|++
T Consensus 235 ~~~~~~~~~~~~~~-~---~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 235 LIELLKNNGRLPAP-P---GCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred HHHHHhcCCcCCCC-C---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 000000 011110 0 112357889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=319.16 Aligned_cols=246 Identities=27% Similarity=0.409 Sum_probs=199.9
Q ss_pred cCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|...+.||.|+||.||-|+ ..+.+.||||++..... +..+..+++.+|+.++.+++|||+|.+.|||..+...|+|||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGK-Qs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeecccccc-ccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 4455669999999999994 56789999999976542 233447789999999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
||- |+-.|++.-+. +++-+.++..|+.+.++||+|||+. +.||||||+.||++++.|.||++|||.|....+.
T Consensus 107 YCl-GSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHh-ccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 995 58888887654 3577889999999999999999999 9999999999999999999999999999987653
Q ss_pred CCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 920 SNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..++|||.|||||++.. +.|+-|+||||+|++..|+.-.++|.-.... +... -.+.....+.+..
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA----MSAL-YHIAQNesPtLqs---- 247 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSAL-YHIAQNESPTLQS---- 247 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH----HHHH-HHHHhcCCCCCCC----
Confidence 46899999999999853 6789999999999999999999999432221 1111 1222233333331
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+....+..++..|+++-|.+|||..++++
T Consensus 248 -~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 248 -NEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -chhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 233446777888999999999999999875
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=347.99 Aligned_cols=258 Identities=22% Similarity=0.352 Sum_probs=199.6
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--CC
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--AQ 832 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~ 832 (1031)
...++|.+.+.||+|+||+||+|.. .++..||+|++...... ......+.+|+.++++++|||||+++++|.+ ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~--e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK--EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC--HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 3457899999999999999999955 46789999998754322 2345778999999999999999999998854 45
Q ss_pred eeEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCC----CCeeeCCCCCCCeeeCCC------
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCL----PPIVHGDISSKNVLLDSE------ 901 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~ivH~Dlkp~NIll~~~------ 901 (1031)
.+|+||||+++++|.+++.... ....+++..++.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 7899999999999999997532 22468999999999999999999998521 259999999999999642
Q ss_pred -----------CceEEeccccccccCCCCCCceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCCCCc
Q 043316 902 -----------HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPRDYV 968 (1031)
Q Consensus 902 -----------~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~~~~ 968 (1031)
+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 348999999998764322 2344578999999999854 45789999999999999999999998644
Q ss_pred CccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 969 STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .......+... +.++.. .....+.++|..||+.+|.+||++.|++.
T Consensus 247 ~~----~~qli~~lk~~--p~lpi~-----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 NN----FSQLISELKRG--PDLPIK-----GKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred Cc----HHHHHHHHhcC--CCCCcC-----CCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 32 11122222111 111111 11236788999999999999999999974
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=328.73 Aligned_cols=258 Identities=21% Similarity=0.285 Sum_probs=196.4
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA---- 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~---- 831 (1031)
..++|.+.+.||+|+||.||+|.. ..++.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc--cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence 357899999999999999999954 568999999987543 1223456788999999999999999999987543
Q ss_pred --CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 832 --QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 832 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
...|+||||+++ ++.+++.. .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeC
Confidence 357999999975 67666643 367888999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH--------
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE-------- 981 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~-------- 981 (1031)
|+++..... .......+|..|+|||++.+..++.++||||+||++|||++|+.||...... ..+......
T Consensus 171 G~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 171 GLARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCPEF 248 (364)
T ss_pred CCccccCCC-CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHH
Confidence 999865432 2234457899999999999989999999999999999999999998654321 111111000
Q ss_pred -------hhhhcC--CCCCC--------------CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 -------INQNLD--HRLPT--------------PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 -------~~~~~~--~~~~~--------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...... +.... ...........+.+++.+|++.||.+|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 00000 00000011235789999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=312.88 Aligned_cols=253 Identities=25% Similarity=0.369 Sum_probs=201.1
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhh--hhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLL--FDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+|...+.||+|+||+||+|...+++.+|||.+..... .......+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999877899999998864321 11223346788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997643 478899999999999999999999 999999999999999999999999999976432
Q ss_pred C------CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 918 H------SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 918 ~------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
. ........++..|+|||++.+..++.++||||+||++|||++|+.||....... ... ..... ....+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~-~~~~~-~~~~~~~~ 231 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMF-YIGAH-RGLMPRLP 231 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHH-Hhhhc-cCCCCCCC
Confidence 1 111233467889999999998889999999999999999999999986433211 100 00000 01111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. .....+.+++.+||+.+|.+||++.|+++
T Consensus 232 ~------~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 232 D------SFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred C------CCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 12235778999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=310.23 Aligned_cols=251 Identities=24% Similarity=0.439 Sum_probs=201.9
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.+|++.+.||+|+||.||+|...+++.+|+|++.... ....++.+|++++++++||+++++++++......++|+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-----MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-----CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 4678889999999999999987778899999986543 23567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 79 EFMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred EcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 9999999999987543 3478899999999999999999999 9999999999999999999999999999865332
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......++.+|+|||.+.++.++.++||||+|+++|||++ |+.||..... .. .............+..
T Consensus 154 ~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~---~~~~~~~~~~~~~~~~--- 225 (256)
T cd05112 154 QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--SE---VVETINAGFRLYKPRL--- 225 (256)
T ss_pred cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--HH---HHHHHhCCCCCCCCCC---
Confidence 11 1122334678999999988889999999999999999998 8999764332 11 1111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.+|++|||+.|+++.|.
T Consensus 226 ---~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 ---ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1236788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=315.34 Aligned_cols=252 Identities=21% Similarity=0.404 Sum_probs=198.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCc----EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.+|+..++||+|+||+||+|.+ .+++ .||+|+++.... ....+.+.+|+.+++.++||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS---PKANKEILDEAYVMAGVGSPYVCRLLGICLTS-T 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC---HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-C
Confidence 5788899999999999999964 4554 589999865431 22356788999999999999999999999764 4
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++++||+++|+|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCcee
Confidence 689999999999999997643 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
........ .....++..|+|||...+..++.++|||||||++|||++ |..||+.... ......+. .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~---~~~~~~~ 232 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLE---KGERLPQ 232 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH---CCCcCCC
Confidence 76433221 112234678999999988889999999999999999998 8899764332 11111111 1111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+. .....+.+++.+||+.||++||++.|+++.|+
T Consensus 233 ~~------~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 233 PP------ICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred Cc------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 12236778999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=329.13 Aligned_cols=258 Identities=20% Similarity=0.294 Sum_probs=196.5
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA---- 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~---- 831 (1031)
..++|.+.+.||+|+||.||+|.. .+++.||||++..... +....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc--ChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 457899999999999999999954 4689999999875431 223456788999999999999999999998643
Q ss_pred --CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 832 --QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 832 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 357999999975 66666543 367888999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH--------
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE-------- 981 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~-------- 981 (1031)
|+++..... .......+|..|+|||++.+..++.++||||+||++|||++|+.||...... ..+...+..
T Consensus 164 g~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 164 GLARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEF 241 (355)
T ss_pred cccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHH
Confidence 999865432 2234467899999999999988999999999999999999999998654321 111110000
Q ss_pred -------hhhhcCC--C--------------CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 -------INQNLDH--R--------------LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 -------~~~~~~~--~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....... . .+............+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 0000000 0 00000000011235789999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=311.88 Aligned_cols=254 Identities=29% Similarity=0.529 Sum_probs=201.6
Q ss_pred hccCccceeecCCCccEEEEEeC-CC---cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|+..+.||+|+||.||+|... ++ ..+|+|+++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT---EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC---HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 46788899999999999999654 33 3799999865421 22356788999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++..
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 82 MIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCcccee
Confidence 99999999999999997543 3578899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCc-e--eeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSNW-T--AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~~-~--~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
........ . ....+..|+|||++.++.++.++||||+||++|||++ |+.||..... .... ..+... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~---~~i~~~--~~~ 229 (268)
T cd05063 157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVM---KAINDG--FRL 229 (268)
T ss_pred cccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHH---HHHhcC--CCC
Confidence 64322211 1 1223457999999988889999999999999999998 9999754332 1111 111111 111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.. .+...++.+++.+||+.+|++||++.+|++.|++
T Consensus 230 ~~~----~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 230 PAP----MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 111 1123467899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=308.91 Aligned_cols=251 Identities=25% Similarity=0.345 Sum_probs=201.2
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-CCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN-AQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-~~~~~lv 837 (1031)
+|++.+.||+|++|.||+|.. .+++.||+|++...... ....+.+.+|++++++++|||++++++.+.. +...++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS--RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC--HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEE
Confidence 478899999999999999954 46789999998654321 2345678899999999999999999998764 4568999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 79 ~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 79 MGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred ecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 99999999999997643 24578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........+++.|+|||++.+..++.++||||+|+++|||++|+.||+..... ...........+..+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~------ 223 (257)
T cd08223 155 QCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN-----SLVYRIIEGKLPPMP------ 223 (257)
T ss_pred cCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHhcCCCCCc------
Confidence 333334556889999999999988999999999999999999999997643321 111111111111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+++.+|++.||++||++.|+++
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 112246788999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=317.05 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=201.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .++..+|+|++.... ....+.+.+|++++++++||||+++++++..+...++|
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES----EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC----HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 4688889999999999999965 468999999986532 23456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 81 IEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 99999999999987643 3588999999999999999999999 999999999999999999999999999876544
Q ss_pred CCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.........+++.|+|||.+. +..++.++||||+|+++|||++|+.||...... ...........+....
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 230 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-----RVLLKILKSEPPTLDQ 230 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-----HHHHHHhcCCCCCcCC
Confidence 333344567899999999874 344677999999999999999999997644321 1111111111111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ......+.+++.+||+.+|.+||++.++++
T Consensus 231 ~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 231 P----SKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred c----ccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 1 112235778899999999999999999975
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=310.31 Aligned_cols=252 Identities=22% Similarity=0.420 Sum_probs=202.9
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|.+.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.+ ...+++|
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 5788999999999999999987778889999886532 235678999999999999999999999887 7789999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 80 EFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 9999999999997643 24578889999999999999999998 9999999999999999999999999999865432
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......++..|+|||++.++.++.++||||+||++|+++| |+.||...... ...............
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~----- 225 (260)
T cd05073 156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALERGYRMPRP----- 225 (260)
T ss_pred CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHhCCCCCCCc-----
Confidence 21 1122345678999999988889999999999999999999 89897643321 111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....++.+++.+|++.+|++||++.++.+.|+.
T Consensus 226 -~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 226 -ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1122467889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=310.95 Aligned_cols=251 Identities=28% Similarity=0.435 Sum_probs=200.9
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh-----hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-----EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
+|.+.+.||+|++|.||+|.. .+++.||+|.+....... ..+..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367788999999999999954 468999999886543221 11234678899999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++|+||+++++|.++++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997643 478889999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC
Q 043316 914 FLNPHSS------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987 (1031)
Q Consensus 914 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 987 (1031)
....... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||...... ..+........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~ 229 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-----QAIFKIGENAS 229 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-----HHHHHHhccCC
Confidence 7642211 112345788999999998888999999999999999999999998754321 11111111111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+..+. .....+.+++.+||+.||.+||++.|+++
T Consensus 230 ~~~~~------~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 230 PEIPS------NISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CcCCc------ccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 22211 12236778899999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=313.21 Aligned_cols=255 Identities=24% Similarity=0.347 Sum_probs=197.5
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
+++.+.....||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++|+||+++++++..++..+
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 344555567899999999999964 468899999886543 234567899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEeccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVSDFGIAKF 914 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~ 914 (1031)
+|+||+++++|.++++........++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|||.+..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999997643211127788899999999999999999 9999999999999986 67899999999986
Q ss_pred cCCCCCCceeeccccCccccccccccC--CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMR--ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
............++..|+|||.+.+.. ++.++||||+|+++|+|++|+.||............ .......+.++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~ 235 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK---VGMFKIHPEIPE 235 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh---hhhhccCCCCCc
Confidence 643333333456789999999986543 788999999999999999999997643321111110 000011111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++.+++.+||+.+|++|||+.|+++
T Consensus 236 ------~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 236 ------SLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ------ccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 11235778899999999999999999986
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=313.66 Aligned_cols=248 Identities=28% Similarity=0.415 Sum_probs=203.3
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||.|++|.||+|.. .+++.||+|++..... ....+.+.+|++++++++||||+++++++.++...++|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA---EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc---chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 577888999999999999965 4689999999865431 234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++... .+++..++.++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 79 EYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred EeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 999999999998764 578899999999999999999999 9999999999999999999999999999877544
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
........++..|+|||.+.+..++.++||||+|+++|||+||+.||...... ...........+.....
T Consensus 152 ~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~----- 221 (274)
T cd06609 152 MSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVLFLIPKNNPPSLEGN----- 221 (274)
T ss_pred ccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHHHHhhhcCCCCCccc-----
Confidence 33334567888999999999888999999999999999999999998644321 11111111112222111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.||++|||++++++
T Consensus 222 ~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 222 KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 02235778999999999999999999975
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=321.47 Aligned_cols=248 Identities=25% Similarity=0.393 Sum_probs=203.6
Q ss_pred CccceeecCCCccEEEEEeC--CC--cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 762 GEKYCIGKGRQGSVYKAELP--SG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
...+.||+|.||.|++|.|. .| ..||||.++..... ....+|.+|+.+|.+|+|||++++||++.+ ....+|
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~---~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN---AIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc---hhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 34567999999999999664 33 47999999876532 257899999999999999999999999988 778899
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+|.++.|+|.+.++. .....+-......++.|||.|+.||.++ +.||||+..+|+++-....|||+|||+.+.+..
T Consensus 189 ~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 999999999999998 4456678889999999999999999999 999999999999999999999999999998865
Q ss_pred CCCCce---eeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 918 HSSNWT---AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 918 ~~~~~~---~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
....+. .......|+|||.+....++.+||||+|||.+|||+| |..||-.... .+..+.+.. ..+++.+
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-----~qIL~~iD~--~erLpRP 337 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-----IQILKNIDA--GERLPRP 337 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-----HHHHHhccc--cccCCCC
Confidence 544332 2334678999999999999999999999999999999 7888765544 233333331 2222221
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
..+...++++++.||..+|++|||+..|.+.
T Consensus 338 ----k~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 338 ----KYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ----CCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 1234478899999999999999999999743
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=342.19 Aligned_cols=254 Identities=24% Similarity=0.388 Sum_probs=198.9
Q ss_pred HHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN---- 830 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~---- 830 (1031)
+...+|++.+.||+||||.||+++.+ ||+.||||++.-.. ......++.+|+..+++++|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 45578889999999999999999654 99999999997764 23457788999999999999999999732100
Q ss_pred --------------------------------------------------------------------------C-----
Q 043316 831 --------------------------------------------------------------------------A----- 831 (1031)
Q Consensus 831 --------------------------------------------------------------------------~----- 831 (1031)
+
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence 0
Q ss_pred ------------------------------------CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHH
Q 043316 832 ------------------------------------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875 (1031)
Q Consensus 832 ------------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L 875 (1031)
..+||-||||+..++.++++++.... .....++++++|+.||
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGL 710 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHH
Confidence 12588999999988888887764321 3468899999999999
Q ss_pred HHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC------------------CCCCCceeeccccCccccccc
Q 043316 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN------------------PHSSNWTAFAGTFGYAAPEIA 937 (1031)
Q Consensus 876 ~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~------------------~~~~~~~~~~gt~~y~aPE~~ 937 (1031)
+|+|++ |||||||||.|||+|+++.|||+|||+|+... ......+..+||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998721 112235678999999999998
Q ss_pred ccc---CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccC
Q 043316 938 HMM---RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVE 1014 (1031)
Q Consensus 938 ~~~---~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 1014 (1031)
.+. .|+.|+|+||+|||++||+. ||+-..+ .+..+...-...++.++....+....-..+|+++++.
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME-------Ra~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~h 857 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME-------RASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSH 857 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHH-------HHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcC
Confidence 765 49999999999999999983 5443222 2222333334555554333445555667889999999
Q ss_pred CCCCCCCHHHHHH
Q 043316 1015 SPEARPTMKKVCN 1027 (1031)
Q Consensus 1015 dP~~Rps~~evl~ 1027 (1031)
||.+||||.|++.
T Consensus 858 dP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 858 DPSKRPTATELLN 870 (1351)
T ss_pred CCccCCCHHHHhh
Confidence 9999999999985
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=309.26 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=204.9
Q ss_pred ccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|+||.||.++ ..+++.+++|.+...... ....+.+.+|++++++++|+||+++++++.+.+..+++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS--EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc--hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEE
Confidence 47888999999999999995 457899999998654321 234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 79 EYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred EecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 9999999999997653 24578999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
........+++.|+|||...+..++.++||||+|+++|||++|+.||+..... . ....+.. ....... .
T Consensus 155 ~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--~---~~~~~~~---~~~~~~~---~ 223 (256)
T cd08221 155 YSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL--N---LVVKIVQ---GNYTPVV---S 223 (256)
T ss_pred cccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH--H---HHHHHHc---CCCCCCc---c
Confidence 33334566899999999998888899999999999999999999997643221 1 1111111 1111111 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
.....+.+++.+||+.+|++||++.|+++..
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1223577889999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=311.00 Aligned_cols=254 Identities=28% Similarity=0.526 Sum_probs=201.0
Q ss_pred hccCccceeecCCCccEEEEEeC-CC---cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.+|.+.+.||+|+||.||+|... ++ ..||||+++... .....+.|.+|+.++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 45788899999999999999653 33 369999986542 123457899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.++++... ..+++.+++.++.|++.|++|||+. |++||||||+||+++.++.+|++|||.+..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~ 155 (269)
T cd05065 81 MIITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRF 155 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccc
Confidence 99999999999999997643 3578999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCC--ceeec---cccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 915 LNPHSSN--WTAFA---GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 915 ~~~~~~~--~~~~~---gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
....... ..... .+..|+|||.+.+..++.++||||+||++|||++ |..||...... .....+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-----~~~~~i~~~~-- 228 (269)
T cd05065 156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVINAIEQDY-- 228 (269)
T ss_pred cccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcCC--
Confidence 5432211 11111 2457999999998899999999999999999987 99997543321 1112221111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..+... +....+.+++.+||+.+|.+||++++++..|++
T Consensus 229 ~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 229 RLPPPM----DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred cCCCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 111111 122356789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=325.82 Aligned_cols=258 Identities=21% Similarity=0.287 Sum_probs=195.9
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC---
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--- 831 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--- 831 (1031)
...++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ--SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh--hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3457899999999999999999954 5788999999876431 223456678999999999999999999988543
Q ss_pred ---CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 832 ---QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 832 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
...++++|++ +++|.++++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcC
Confidence 3568999988 67898887643 488899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH------
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE------ 981 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~------ 981 (1031)
||++...... .....+++.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ........
T Consensus 162 fg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~ 237 (343)
T cd07878 162 FGLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVVGTPSP 237 (343)
T ss_pred CccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCCH
Confidence 9999875432 234578999999999876 468899999999999999999999986543210 00000000
Q ss_pred ---------hhhhcCCCCCCCChhHH-----HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 ---------INQNLDHRLPTPSRDVM-----DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ---------~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+..+.... .....+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 238 EVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000010000000 01124678999999999999999999985
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=318.17 Aligned_cols=261 Identities=24% Similarity=0.326 Sum_probs=201.5
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeE
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFC 828 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 828 (1031)
++.+.++.++|++.+.||+|+||.||+|.. .+++.+|+|++.... .....+.+|+.+++++ +||||+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 445556678999999999999999999954 568899999875432 1235677899999999 699999999987
Q ss_pred e-----cCCeeEEEEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC
Q 043316 829 S-----NAQHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902 (1031)
Q Consensus 829 ~-----~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1031)
. .++..++||||+++++|.+++... .....+++..+..++.|++.|++|||+. +++||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 3 446789999999999999987642 1234578889999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCCceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhh
Q 043316 903 EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~ 977 (1031)
.++|+|||++..............|+..|+|||++.. ..++.++||||+||++|||++|+.||.......
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~----- 236 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR----- 236 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-----
Confidence 9999999999876443333344568999999998753 447889999999999999999999976443211
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
................ . .....+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~-~---~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 237 ALFKIPRNPPPTLHQP-E---LWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHhhccccCCCcccCC-C---CcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1111111111111110 0 112357789999999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=317.55 Aligned_cols=259 Identities=23% Similarity=0.298 Sum_probs=192.7
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC---CCCceeeeeeeEec-----
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI---RHRNIIKFHGFCSN----- 830 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~~----- 830 (1031)
+|++.+.||+|+||+||+|.. .+++.||+|.++..... ......+.+|+.+++++ +||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE--DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC--CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence 478889999999999999955 47899999998754321 11233456677776655 79999999998864
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
....++||||+++ +|.+++.... ...+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 79 ~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 79 ETKVTLVFEHVDQ-DLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred CceEEEEEccccc-CHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccC
Confidence 3457999999974 8888886543 23578999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh----h-
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ----N- 985 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~----~- 985 (1031)
++...... .......++..|+|||++.+..++.++||||+||++|||++|+.||...... ............ .
T Consensus 154 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 154 LARIYSCQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred ccccccCc-ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhC
Confidence 99876432 2223456789999999998888999999999999999999999998644321 111111110000 0
Q ss_pred ----------cCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 ----------LDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ----------~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........... ..+....+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000000 0111235679999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=316.36 Aligned_cols=260 Identities=20% Similarity=0.306 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|+..+.||+|++|.||+|... +++.||+|++..... .....+.+.+|++++++++|||++++++++..+...++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED--DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc--CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEE
Confidence 36888899999999999999654 689999999865431 122345678999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++++++..+..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 79 FEYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred EeccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 99999998888776432 478999999999999999999998 999999999999999999999999999987754
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh-------hcC--
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ-------NLD-- 987 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~-------~~~-- 987 (1031)
.........++..|+|||++.+ ..++.++||||+|+++|||++|+.||......... ......... ..+
T Consensus 153 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 153 PGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQL-YLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred CcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCCCChHHhhhcccc
Confidence 4333344567889999999876 45788999999999999999999998754432111 111100000 000
Q ss_pred -----CCCCCC--Chh----HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 -----HRLPTP--SRD----VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 -----~~~~~~--~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+.. ... .......+.+++.+||+.||++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000 000 0111346789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=309.78 Aligned_cols=248 Identities=21% Similarity=0.332 Sum_probs=206.9
Q ss_pred ccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
-|...+.||+|.|+.|-.|+ .-+|.+||||++.+... +......+.+|+.-|+.++|||||++|++......+|+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl--D~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL--DTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc--chhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 46667789999999999994 46999999999987653 2345667889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-CCCceEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-SEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~ 917 (1031)
|.-++|+|.+|+-.+.. .+.+..+.+++.||+.|+.|+|.. .+|||||||+||.+- .-|-||++|||++..+.+
T Consensus 97 ELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 99999999999987653 478899999999999999999999 899999999998775 468899999999998864
Q ss_pred CCCCceeeccccCccccccccccCCC-ccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRAT-EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
+...+..+|+..|-|||++.|..|+ +++||||+|||+|-+.+|+.||+...+.+ --.++. +=.+.-+
T Consensus 172 -G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE--TLTmIm------DCKYtvP--- 239 (864)
T KOG4717|consen 172 -GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE--TLTMIM------DCKYTVP--- 239 (864)
T ss_pred -cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh--hhhhhh------cccccCc---
Confidence 4556788999999999999998885 68999999999999999999998766532 112222 2222211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..-..+..++|..|++.||++|.+.+||+.
T Consensus 240 -shvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 240 -SHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 112346789999999999999999999874
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=318.20 Aligned_cols=259 Identities=18% Similarity=0.239 Sum_probs=197.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|+. .+++.||+|.++.... ......+.+|+.++++++||||+++++++.+++..++|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc---cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 5789999999999999999955 4689999999865431 22345677899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 83 ~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 156 (301)
T cd07873 83 FEYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 156 (301)
T ss_pred Eeccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence 99997 58888886542 3478899999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh------------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ------------ 984 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~------------ 984 (1031)
.........+++.|+|||++.+. .++.++||||+||++|||+||+.||....... ...........
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 157 PTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred CCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCChhhchhhhcc
Confidence 33333445678999999987654 47889999999999999999999986543210 00000000000
Q ss_pred --hcCCCCCCCChhH-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 --NLDHRLPTPSRDV-----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 --~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+...... ......+.+++.+|++.||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000000000 011235678999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=312.30 Aligned_cols=258 Identities=22% Similarity=0.370 Sum_probs=199.4
Q ss_pred ccCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--C
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--Q 832 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~ 832 (1031)
-|++.+.||+|+||.||.|+. .+++.||+|.++... .....+.+.+|++++++++||||+++++++.+. .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 467888999999999999963 357899999986542 123356789999999999999999999998775 5
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++||||+++++|.+++.... ..+++.++..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 6899999999999999986543 2478899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch----------hhhhhH
Q 043316 913 KFLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS----------SFSNMI 979 (1031)
Q Consensus 913 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~----------~~~~~~ 979 (1031)
......... .....++..|+|||++.+..++.++||||+||++|||+|++.|+........ ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 876433221 1234567789999999888899999999999999999998776422111000 000111
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...... ...+.. . .....+.+++.+||+.||++|||++|+++.+++
T Consensus 237 ~~~~~~--~~~~~~-~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 237 RVLEEG--KRLPRP-P---NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred HHHHcC--ccCCCC-C---CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 111111 111111 1 123468889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=326.17 Aligned_cols=243 Identities=24% Similarity=0.289 Sum_probs=188.5
Q ss_pred eecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC---CCCceeeeeeeEecCCeeEEEEEecc
Q 043316 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI---RHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
||+|+||+||+|+. .+++.||||++.+..... ......+.+|..++... +||+|+++++++.+....|+||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVA-KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhh-hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence 69999999999955 468999999997644322 22344556677776655 69999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~ 153 (330)
T cd05586 80 GGELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTT 153 (330)
T ss_pred CChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCc
Confidence 999999987543 478899999999999999999999 99999999999999999999999999997643333334
Q ss_pred eeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL 1001 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1031)
....||..|+|||++.+. .++.++||||+||++|||++|+.||..... ... ...+.. ....++.. . ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--~~~---~~~i~~-~~~~~~~~--~---~~ 222 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--QQM---YRNIAF-GKVRFPKN--V---LS 222 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--HHH---HHHHHc-CCCCCCCc--c---CC
Confidence 456789999999998764 478999999999999999999999764332 111 111111 01111111 1 12
Q ss_pred HHHHHHHHhhccCCCCCCC----CHHHHHH
Q 043316 1002 MSIMEVAILCLVESPEARP----TMKKVCN 1027 (1031)
Q Consensus 1002 ~~l~~li~~cl~~dP~~Rp----s~~evl~ 1027 (1031)
..+.+++.+||+.||++|| ++.|+++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 3567889999999999998 5666654
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=312.94 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=188.0
Q ss_pred eeecCCCccEEEEEeCC---CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 766 CIGKGRQGSVYKAELPS---GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
.||+|+||.||+|...+ ...+|+|.+.... .......+.+|+..++.++||||+++++++.+....++||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA---TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC---ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 58999999999995433 4578888875432 12345678899999999999999999999999999999999999
Q ss_pred CCCchhhcccCCc--cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 843 RGSLTTILKDDAA--AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 843 ~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
+|+|.+++..... ....++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchh
Confidence 9999999976532 22346778899999999999999999 999999999999999999999999999875433221
Q ss_pred --CceeeccccCccccccccc-------cCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 921 --NWTAFAGTFGYAAPEIAHM-------MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 921 --~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
......++..|+|||+... ..++.++||||+||++|||++ |..||....... ...... .......
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~----~~~~~~~ 230 (269)
T cd05042 156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVV----REQDIKL 230 (269)
T ss_pred eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHh----hccCccC
Confidence 1123345678999998643 356789999999999999999 778876443211 111111 1111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.+. ........+.+++..|| .||++|||++||++.|.
T Consensus 231 ~~~~-~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQ-LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCc-ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111 01112234556777888 59999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=310.21 Aligned_cols=257 Identities=28% Similarity=0.401 Sum_probs=205.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||.|+||+||+|.. .++..+|+|++...... ...+.+.+|++.++.++|+||+++++.+..+...++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ---TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc---hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEE
Confidence 3688999999999999999964 46889999998654321 2467889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++++|.++++.......+++..+..++.|++.|++|||+. |++||||+|+||++++++.++|+|||++..+..
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 99999999999997654334688999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC----ceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 918 HSSN----WTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 918 ~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.... .....++..|+|||++... .++.++|+||+||++|||++|+.||...... ..+ .......++....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~----~~~~~~~~~~~~~ 229 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVL----MLTLQNDPPSLET 229 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhH----HHHhcCCCCCcCC
Confidence 3222 1334678999999998776 7899999999999999999999998644331 111 1111111111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ........+.+++.+|++.||++||+++|+++
T Consensus 230 ~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 230 GA-DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cc-ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11 01122346788999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=322.16 Aligned_cols=255 Identities=22% Similarity=0.268 Sum_probs=197.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||+||+|+. .+++.||+|++.+.... .....+.+.+|+.++..++|++|+++++++.+++..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML-KRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-hhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 4688999999999999999965 46889999998764321 223456688899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred EeCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999997632 3578889999999999999999999 999999999999999999999999999987644
Q ss_pred CCCC-ceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh-cCCCC
Q 043316 918 HSSN-WTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN-LDHRL 990 (1031)
Q Consensus 918 ~~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 990 (1031)
.... .....|++.|+|||++.+ +.++.++||||+||++|||++|+.||...... .....+... ....+
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~ 229 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ETYGKIMNHEERFQF 229 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH-----HHHHHHHcCCCcccC
Confidence 3222 223568999999999875 46788999999999999999999998643321 111111110 00111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCC--CCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEA--RPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 1027 (1031)
+.. ..+...++.+++.+|+..++++ |++++++++
T Consensus 230 p~~---~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 230 PSH---ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred CCc---cccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 111 1112345777888888876554 468888764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=318.49 Aligned_cols=248 Identities=26% Similarity=0.395 Sum_probs=199.0
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|.....||+|+||.||+|.. .++..||||++.... ....+.+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch----HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 33345699999999999954 578999999986532 2345678899999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++++|.+++... .+++.+++.++.||+.|++|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 100 ~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (292)
T cd06658 100 FLEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 172 (292)
T ss_pred CCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence 99999999988543 478899999999999999999999 99999999999999999999999999997654333
Q ss_pred CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
.......++..|+|||...+..++.++||||+|+++|||++|+.||...... ................. ..
T Consensus 173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~----~~ 243 (292)
T cd06658 173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-----QAMRRIRDNLPPRVKDS----HK 243 (292)
T ss_pred ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhcCCCccccc----cc
Confidence 3334567899999999998888999999999999999999999997643321 11111112222222211 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 1000 KLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
....+.+++.+|++.||.+|||++|+++.
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 22356788999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=352.97 Aligned_cols=252 Identities=25% Similarity=0.351 Sum_probs=204.8
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
-++..+..||.|.||.||.| ...+|+..|||.++.+... ......+.+|+.++..++|||+|+++|+-.+.+..+|.
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 45667888999999999999 5678999999998775432 44567788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||||++|+|.+.+...+. .++.....+..|++.|++|||++ |||||||||.||+++.+|-+|++|||.|..+..
T Consensus 1313 MEyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecC
Confidence 999999999999987643 34456667889999999999999 999999999999999999999999999998765
Q ss_pred CCCC----ceeeccccCccccccccccC---CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 918 HSSN----WTAFAGTFGYAAPEIAHMMR---ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 918 ~~~~----~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
.... .....||+.|||||++.+.. ...+.||||+|||+.||+||++||...+.++..+....... .+.+
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh----~Pq~ 1462 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGH----KPQI 1462 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccC----CCCC
Confidence 4322 34578999999999997643 46789999999999999999999886665443333222111 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
| .. -..+-.+++..|++.||++|.++.|+++.
T Consensus 1463 P---~~---ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1463 P---ER---LSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred c---hh---hhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1 11 22245678899999999999999998763
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-34 Score=310.96 Aligned_cols=249 Identities=26% Similarity=0.379 Sum_probs=201.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
..|+..+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.++++++||||+++++++.++...++|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 3466778899999999999965 4689999999865432 23457789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++.. .+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 81 MEYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred EecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence 9999999999998753 478889999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........++..|+|||++.+..++.++|||||||++|||+||+.||....... ..........+. ..
T Consensus 154 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~------~~ 222 (277)
T cd06640 154 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR-----VLFLIPKNNPPT------LT 222 (277)
T ss_pred CccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh-----HhhhhhcCCCCC------Cc
Confidence 3333344567889999999988889999999999999999999999976443211 001111111111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
......+.+++.+||+.+|++||++.|+++.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 1234567899999999999999999999753
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=313.01 Aligned_cols=259 Identities=24% Similarity=0.415 Sum_probs=203.3
Q ss_pred hccCccceeecCCCccEEEEEeC-----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--A 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~ 831 (1031)
++|...+.||+|+||.||+|... ++..||||++...... ...+.|.+|++++++++||||+++++++.. +
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 45777889999999999999643 4789999998765421 346789999999999999999999999987 5
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 155 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGL 155 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccc
Confidence 57899999999999999997653 2588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCc---eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh----------hhhh
Q 043316 912 AKFLNPHSSNW---TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS----------FSNM 978 (1031)
Q Consensus 912 a~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~----------~~~~ 978 (1031)
+.......... ....++..|+|||...+..++.++||||||+++|||++|+.|+......... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 156 AKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred ccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 98765322211 1223456799999998888999999999999999999999997543322111 1111
Q ss_pred HHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....... ...+.. .....++.+++.+||+.+|++|||++||+++|++
T Consensus 236 ~~~~~~~--~~~~~~----~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 236 LELLKEG--ERLPRP----PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred HHHHHcC--CcCCCC----ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 1111111 111111 1112468889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=312.98 Aligned_cols=253 Identities=28% Similarity=0.384 Sum_probs=204.3
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|++|.||+|... +++.+|+|++..... ....+++.+|++++++++||||+++++++..++..++|+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN---EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC---hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 5777889999999999999654 689999999876432 234677899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++||||||+||+++.++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 79 EYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred EecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 9999999999997653 457889999999999999999999 7 999999999999999999999999999876543
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
... ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||......................+..+ ..
T Consensus 154 ~~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~- 227 (265)
T cd06605 154 SLA--KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLP---SG- 227 (265)
T ss_pred HHh--hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCC---hh-
Confidence 221 126678899999999988999999999999999999999999865533222222222222222111111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.++|.+||..||++|||+.|++.
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 228 -KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 13346788999999999999999999975
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=319.95 Aligned_cols=256 Identities=23% Similarity=0.374 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEeC--------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
.+|.+.+.||+|+||.||+|... .+..||+|.++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 46889999999999999999532 12478999886532 123467889999999999 7999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCC-------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDA-------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
.++..++++||+++|+|.+++.... ....+++.++..++.|++.||+|||+. |++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence 9999999999999999999987532 123578899999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||.++........ .....++..|+|||++.+..++.++||||+|+++|||++ |..||..... .
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~ 243 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--E 243 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH--H
Confidence 9999999999999999865432211 122233567999999998889999999999999999998 8888764432 1
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
. ....+........+. .....+.+++.+||+.+|++|||+.|+++.|++
T Consensus 244 ~---~~~~~~~~~~~~~~~------~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~ 292 (334)
T cd05100 244 E---LFKLLKEGHRMDKPA------NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDR 292 (334)
T ss_pred H---HHHHHHcCCCCCCCC------CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 1 111111111111111 112367789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=307.40 Aligned_cols=250 Identities=21% Similarity=0.249 Sum_probs=203.3
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.+.|..-++||+|+||.||-+. ..+|+.||+|++.++.+.. ........+|-.++++++.+.||.+-.+|++.+.+++
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKk-r~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKK-RKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHH-hhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 3567888899999999999994 4589999999997766533 3456677899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|+..|.||+|..+|.+.+. ..++++.+..++.+|+.||++||.. +||.||+||+|||+|+.|+++|+|.|+|..+.
T Consensus 263 VLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999999998764 5689999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......+||.+|||||++.++.|+...|.||+||++|||+.|+.||........ ...+.......+.+++ .
T Consensus 339 ~g-~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk--~eEvdrr~~~~~~ey~---~- 411 (591)
T KOG0986|consen 339 EG-KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK--REEVDRRTLEDPEEYS---D- 411 (591)
T ss_pred CC-CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh--HHHHHHHHhcchhhcc---c-
Confidence 43 334556999999999999999999999999999999999999999764333110 0011111111111222 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPT 1021 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps 1021 (1031)
+...+..++....+++||++|--
T Consensus 412 --kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 412 --KFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred --ccCHHHHHHHHHHHccCHHHhcc
Confidence 22334556677789999999963
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=314.09 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=201.0
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|... +++.||+|.+.... +......+.+|+.++++++||||+++++++..++..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEE
Confidence 36788899999999999999654 78999999886532 122356789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|..++........+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.++|+|||.+.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence 999999999999876533346899999999999999999999632 899999999999999999999999999976532
Q ss_pred CCCCceeeccccCccccccccccC------CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMR------ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
. ......++..|+|||.+.+.. ++.++||||+||++|||++|+.||+..... ........+........+
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~ 231 (286)
T cd06622 156 S--LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--NIFAQLSAIVDGDPPTLP 231 (286)
T ss_pred C--ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh--hHHHHHHHHhhcCCCCCC
Confidence 2 223346788999999986543 478999999999999999999998643221 111111111111222222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. +....+.+++.+||+.+|++||+++|+++
T Consensus 232 ~------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 232 S------GYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred c------ccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 1 12346778999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=318.73 Aligned_cols=195 Identities=21% Similarity=0.350 Sum_probs=159.6
Q ss_pred cceeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe--cCCeeEEEE
Q 043316 764 KYCIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS--NAQHSFIVS 838 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~--~~~~~~lv~ 838 (1031)
+.+||+|+||+||+|+.. ++..||+|++.... ....+.+|++++++++||||+++++++. .+...++|+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEE
Confidence 357999999999999754 45789999986532 2345779999999999999999999985 356789999
Q ss_pred EeccCCCchhhcccC------CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee----CCCCceEEec
Q 043316 839 EYLDRGSLTTILKDD------AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL----DSEHEAHVSD 908 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~D 908 (1031)
||+++ +|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 99875 777776432 1123578889999999999999999999 99999999999999 4667899999
Q ss_pred cccccccCCCCC---CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCc
Q 043316 909 FGIAKFLNPHSS---NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYV 968 (1031)
Q Consensus 909 fg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~ 968 (1031)
||+++....... ......+|+.|+|||++.+. .++.++||||+||++|||+||+.||...
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 999987643322 22345789999999998764 5789999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=328.65 Aligned_cols=253 Identities=19% Similarity=0.238 Sum_probs=193.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
..|.+.+.||+|+||.||+|.. .+++.||||... ...+.+|++++++++|||||++++++..++..++|
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 4688999999999999999955 468899999632 22356899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||++. ++|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 239 ~e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 239 LPKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EEccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 99995 68888876532 3589999999999999999999999 999999999999999999999999999986543
Q ss_pred CCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCC-CCcCcc-----chhhhhhHHHhhhhcCCC
Q 043316 918 HSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPR-DYVSTN-----FSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 918 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~-~~~~~~-----~~~~~~~~~~~~~~~~~~ 989 (1031)
... ......||..|+|||++.+..++.++|||||||++|||++|..|+ ...... .......+....... ..
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~-~~ 391 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHV-DE 391 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccc-cc
Confidence 221 122456899999999999989999999999999999999987663 221110 011111111111000 00
Q ss_pred CCC----------------------CChhH---HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 990 LPT----------------------PSRDV---MDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 990 ~~~----------------------~~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
++. ....+ ......+.+++.+||+.||.+|||+.|+++.
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 00000 0112257789999999999999999999864
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=321.01 Aligned_cols=255 Identities=21% Similarity=0.259 Sum_probs=196.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.++||+|+||+||+++. .+++.||+|++.+.... .....+.+.+|+.++..++|++|+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-KRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-HhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence 3688899999999999999965 45789999998654322 223345688999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.++++... ..+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred EeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999997632 3578889999999999999999999 999999999999999999999999999976533
Q ss_pred CCCC-ceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh-cCCCC
Q 043316 918 HSSN-WTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN-LDHRL 990 (1031)
Q Consensus 918 ~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 990 (1031)
.... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... .....+... ....+
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~ 229 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ETYGKIMNHKERFQF 229 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH-----HHHHHHhCCCccccC
Confidence 2222 23357899999999986 345788999999999999999999998643321 111111111 01111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCC--CCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEA--RPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 1027 (1031)
+... ......+.+++.+|+..+|++ |++++|+++
T Consensus 230 p~~~---~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 230 PAQV---TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred CCcc---ccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 1111 112335677888888665444 789998875
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=310.81 Aligned_cols=248 Identities=24% Similarity=0.397 Sum_probs=192.2
Q ss_pred eeecCCCccEEEEEeC-CCc--EEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEec
Q 043316 766 CIGKGRQGSVYKAELP-SGI--IFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
.||+|+||.||+|... ++. .+|+|.++... .....+.+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC---CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 5899999999999664 443 46888876432 123456788999999999 7999999999999999999999999
Q ss_pred cCCCchhhcccCC-------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 842 DRGSLTTILKDDA-------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 842 ~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
++++|.+++.... ....+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECC
Confidence 9999999986532 113478899999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcC
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLD 987 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 987 (1031)
||++....... .......+..|+|||++.+..++.++|||||||++|||++ |+.||...... ...........
T Consensus 156 fgl~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~~ 229 (270)
T cd05047 156 FGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKLPQGYR 229 (270)
T ss_pred CCCccccchhh-hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHHHhCCCC
Confidence 99986432111 1112233567999999988889999999999999999997 99997543221 11111111111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 988 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...+. .....+.+++.+||+.||.+|||+.|+++.|++
T Consensus 230 ~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 230 LEKPL------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred CCCCC------cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 11111 112357789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=308.08 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=199.1
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.+|++.+.||+|+||.||++.. +++.||+|+++... ..+.+.+|+.++++++|||++++++++..++ .++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV------TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc------hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEE
Confidence 5688999999999999999975 78889999986532 3467889999999999999999999987654 69999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ...+++..+..++.|++.|++|||+. |++||||||+||+++.++.+||+|||.+......
T Consensus 78 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 78 ELMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred ECCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc
Confidence 9999999999997653 23578899999999999999999998 9999999999999999999999999999764321
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
......+..|+|||.+.++.++.++||||+||++|||++ |+.||...... .. ............+ .
T Consensus 154 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~---~~~~~~~~~~~~~---~-- 220 (254)
T cd05083 154 ---VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EV---KECVEKGYRMEPP---E-- 220 (254)
T ss_pred ---CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HH---HHHHhCCCCCCCC---C--
Confidence 122334678999999988889999999999999999998 99997644321 11 1111111111111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||+.+|++||+++++++.|++
T Consensus 221 -~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 221 -GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 122467789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=314.57 Aligned_cols=248 Identities=26% Similarity=0.376 Sum_probs=199.8
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|+.++++++||||+++++++..+...++|+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc---hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 355667799999999999954 5688999999865431 223567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++... .+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06642 82 EYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EccCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence 999999999998643 478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
........++..|+|||.+.+..++.++|||||||++|||++|+.||........ .........+... .
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~------~ 223 (277)
T cd06642 155 QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFLIPKNSPPTLE------G 223 (277)
T ss_pred chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----HhhhhcCCCCCCC------c
Confidence 3223345678899999999988899999999999999999999999764332110 0111111111111 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.....+.+++.+||+.+|++||++.|+++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 223467889999999999999999999873
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=306.00 Aligned_cols=248 Identities=27% Similarity=0.392 Sum_probs=197.8
Q ss_pred ceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCC
Q 043316 765 YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRG 844 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 844 (1031)
++||+|+||.||+|...+++.||+|++...... ...+.+.+|++++++++||||+++++++.+....++||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP---DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH---HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 368999999999997766999999998765421 34678899999999999999999999999999999999999999
Q ss_pred CchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc--
Q 043316 845 SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW-- 922 (1031)
Q Consensus 845 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-- 922 (1031)
+|.+++.... ..+++..+..++.+++.|++|||++ +++||||||+||+++.++.++|+|||.+..........
T Consensus 78 ~l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 78 SLLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred cHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence 9999997543 2578889999999999999999999 99999999999999999999999999998654211111
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL 1001 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1031)
.....+..|+|||.+.++.++.++||||+|+++|||+| |..||...... ... ...........+ . ...
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~---~~~~~~~~~~~~---~---~~~ 221 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTR---ERIESGYRMPAP---Q---LCP 221 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHH---HHHhcCCCCCCC---c---cCC
Confidence 11223567999999988889999999999999999999 78887544321 111 111111111111 1 123
Q ss_pred HHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 1002 MSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 1002 ~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..+.+++.+|++.+|++|||+.|+++.|+.
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 368889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=310.19 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=185.8
Q ss_pred eeecCCCccEEEEEeCCC---cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 766 CIGKGRQGSVYKAELPSG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
.||+|+||.||+|+..++ ..+++|.+.... .....+.+.+|+..++.++||||+++++++.+....++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA---SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC---ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 589999999999965443 356666665432 12346789999999999999999999999999999999999999
Q ss_pred CCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC--
Q 043316 843 RGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS-- 919 (1031)
Q Consensus 843 ~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 919 (1031)
+|+|.++++.... ....++..+..++.||+.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 9999999976432 23456677889999999999999999 99999999999999999999999999986432211
Q ss_pred CCceeeccccCccccccccc-------cCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhh-hhcCCCC
Q 043316 920 SNWTAFAGTFGYAAPEIAHM-------MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEIN-QNLDHRL 990 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~ 990 (1031)
.......++..|+|||++.. ..++.++|||||||++|||++ |..||...... ..+........ ...++..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-EVLNHVIKDQQVKLFKPQL 234 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhhcccccCCCcc
Confidence 11234567889999998743 245779999999999999997 56676543321 11111111110 1111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
... ....+.+++..|| .+|++||+++||++.|.
T Consensus 235 ~~~------~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 235 ELP------YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCC------CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111 1235667888899 67999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=306.53 Aligned_cols=251 Identities=22% Similarity=0.352 Sum_probs=202.6
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|+||.||++.. .+++.||+|++...... ....+++.+|+.++++++||||+++++++.+.+..++|+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS--PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC--hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEE
Confidence 478889999999999999954 57899999998654321 234567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 79 DYCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred ecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 99999999999875432 3468889999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
........++..|+|||+..++.++.++|||||||++|+|++|+.||..... ......... ...+..+.
T Consensus 155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~---~~~~~~~~--- 223 (256)
T cd08218 155 VELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----KNLVLKIIR---GSYPPVSS--- 223 (256)
T ss_pred hhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----HHHHHHHhc---CCCCCCcc---
Confidence 3333345678899999999888899999999999999999999999763322 111111111 11111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.+|++||++.||++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 12336788999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=316.13 Aligned_cols=260 Identities=26% Similarity=0.350 Sum_probs=201.5
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeE
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFC 828 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 828 (1031)
..++.++.++|.+.+.||+|+||.||+|.. .+++.+|+|++.... ...+.+.+|+.+++++ +|||++++++++
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 344455678899999999999999999955 578999999986532 1245677899999988 799999999998
Q ss_pred ecC-----CeeEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC
Q 043316 829 SNA-----QHSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902 (1031)
Q Consensus 829 ~~~-----~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1031)
... +..++|+||+++++|.++++... ....+++..++.++.|++.|++|||+. +++||||||+||+++.++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 653 45899999999999999886422 234578999999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCCceeeccccCcccccccccc-----CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhh
Q 043316 903 EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-----RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~ 977 (1031)
.+||+|||.+..............++..|+|||.+... .++.++||||+||++|||++|+.||...... .
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-----~ 240 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-----K 240 (291)
T ss_pred CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-----H
Confidence 99999999998764433333345678999999987543 3678999999999999999999997644321 1
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............... ..+....+.+++.+||+.+|++||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 241 TLFKIPRNPPPTLLH----PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHhcCCCCCCCc----ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111111111111 1122346888999999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=318.03 Aligned_cols=260 Identities=19% Similarity=0.260 Sum_probs=197.0
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|+||.||+|.. .+|+.||+|+++.... .......+.+|++++++++||||+++++++.+.+..++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc--cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEE
Confidence 477889999999999999965 4789999999865432 1223456778999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||++ ++|.+++.... ..+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 79 EYCD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred ecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 9997 47877776432 3588999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh-----------hhhc
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI-----------NQNL 986 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~-----------~~~~ 986 (1031)
........++..|+|||++.+.. ++.++||||+||++|||+||+.|+................. ....
T Consensus 153 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 153 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 33334456789999999987644 68999999999999999999998543222111111110000 0000
Q ss_pred C-CCCCCCChh------HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 D-HRLPTPSRD------VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ~-~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+ ...+..... ......++.+++.+||+.||.+|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0 000000000 0011245778999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=315.56 Aligned_cols=260 Identities=19% Similarity=0.297 Sum_probs=197.4
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|++|.||+|... +++.||+|.+..... ......+.+|++++++++||||+++++++.++...++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE---EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc---cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 57889999999999999999654 789999999865431 11234567899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 82 ~e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 82 FEYLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred EecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 999985 8998887543 2578899999999999999999999 999999999999999999999999999876533
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh------------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ------------ 984 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~------------ 984 (1031)
.........++..|+|||++.+ ..++.++||||+|+++|||++|+.||...................
T Consensus 156 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 156 PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred CCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 2222233456889999998875 457899999999999999999999986554221111111100000
Q ss_pred --hcCCCCCCC-ChhH------HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 --NLDHRLPTP-SRDV------MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 --~~~~~~~~~-~~~~------~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... .... ........+++.+|++.+|++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000000 0000 011145678999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=319.74 Aligned_cols=249 Identities=23% Similarity=0.340 Sum_probs=204.5
Q ss_pred cCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|.++..||.|+||.||+|..+ ++-..|.|++..+. ....++|+-||+++..++||+||++++.|..++.+|+..|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks----eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS----EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc----hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 455567999999999999554 45667778875543 4568899999999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
||.||-.+..+-.-+ ..+++.++.-+++|++.||.|||++ +|||||||+.||+++-+|.++|+|||.+.......
T Consensus 110 FC~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~ 184 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR 184 (1187)
T ss_pred ecCCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHH
Confidence 999998888876543 3588999999999999999999999 99999999999999999999999999987654444
Q ss_pred CCceeeccccCccccccc-----cccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 920 SNWTAFAGTFGYAAPEIA-----HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.....+.||+.|||||+. +..+|+.++||||||+.+.||..+.+|...... ...+.++..-.++.+..
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-----MRVllKiaKSePPTLlq-- 257 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSEPPTLLQ-- 257 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-----HHHHHHHhhcCCCcccC--
Confidence 445678999999999985 456899999999999999999999999554433 22233333333333332
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++++|+.+||..||+++++++
T Consensus 258 --PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 258 --PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred --cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 2344567889999999999999999999975
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=311.48 Aligned_cols=256 Identities=23% Similarity=0.400 Sum_probs=202.7
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|++.+.||+|+||.||+|+.+ +.+.||+|.+.... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK---DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc---chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 57888999999999999999753 34679999876532 1223567899999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCcc------ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAA------KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
..++||||+++++|.+++...... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEE
Confidence 999999999999999999765421 2588999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCC-CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhh
Q 043316 907 SDFGIAKFLNPHS-SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 984 (1031)
+|||++....... .......++..|+|||.+.+..++.++||||+|+++|+|++ |..||...... .. ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~---~~~~~~ 233 (275)
T cd05046 159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EV---LNRLQA 233 (275)
T ss_pred cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HH---HHHHHc
Confidence 9999987543221 12234456778999999988888999999999999999999 78887543321 11 111111
Q ss_pred h-cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 985 N-LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 985 ~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
. .....+. .....+.+++.+||+.+|++||++.|+++.|.+
T Consensus 234 ~~~~~~~~~------~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 234 GKLELPVPE------GCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CCcCCCCCC------CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 1 0001111 112367889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=321.59 Aligned_cols=259 Identities=18% Similarity=0.245 Sum_probs=192.2
Q ss_pred ccceeecC--CCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 763 EKYCIGKG--RQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 763 ~~~~lg~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
+.++||+| +|++||++. ..+|+.||+|++....... ...+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN--EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccH--HHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEe
Confidence 34679999 678999994 4679999999987643211 234567789999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 80 FMAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred ccCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 9999999999975432 3478899999999999999999999 99999999999999999999999998765432111
Q ss_pred C-------CceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc----
Q 043316 920 S-------NWTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL---- 986 (1031)
Q Consensus 920 ~-------~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~---- 986 (1031)
. ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.....................
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTT 235 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccc
Confidence 1 0112346778999999876 45889999999999999999999998754321110000000000000
Q ss_pred ---------------CC----------CCCCC-----ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 ---------------DH----------RLPTP-----SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ---------------~~----------~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+. ..+.. ..........+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 236 IPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00 00000 0000111236789999999999999999999975
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=312.27 Aligned_cols=261 Identities=26% Similarity=0.320 Sum_probs=201.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--CCeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--AQHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~~~~ 835 (1031)
++|+..+.||.|++|.||+|.. .+++.+|+|.+..... .....++.+|++++++++||||+++++++.+ .+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN---PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc---hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEE
Confidence 3578889999999999999965 4689999999865421 2346778999999999999999999999865 34789
Q ss_pred EEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+||||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 154 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGE 154 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccc
Confidence 9999999999998875421 234578889999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
..... .....++..|+|||.+.+..++.++||||+||++|+|++|+.||+............................
T Consensus 155 ~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd06621 155 LVNSL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEP 232 (287)
T ss_pred ccccc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCC
Confidence 53221 2234578899999999888899999999999999999999999875532111111111221111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+.+++.+||+.+|.+|||+.|+++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 233 GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 111122346789999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=313.87 Aligned_cols=258 Identities=23% Similarity=0.355 Sum_probs=200.9
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeE
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFC 828 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 828 (1031)
..++....+.|++.+.+|+|+||.||+|.. .+++.+|+|++.... .....+..|+.+++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-----DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-----HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 344445567889999999999999999955 578999999975532 2345678899999988 699999999998
Q ss_pred ec------CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC
Q 043316 829 SN------AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902 (1031)
Q Consensus 829 ~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1031)
.. ....+++|||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||+|+||+++.++
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 53 457899999999999999997643 23467888999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhh
Q 043316 903 EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~ 977 (1031)
.++|+|||++..............++..|+|||.+. +..++.++||||+||++|||++|+.||.........
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~--- 235 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL--- 235 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh---
Confidence 999999999886543333334567899999999875 345788999999999999999999998644321110
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............ .......+.+++.+||+.||.+||++.|+++
T Consensus 236 --~~~~~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 --FLIPRNPPPKLK-----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred --hhHhhCCCCCCc-----ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 111111111111 0112346888999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=312.76 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=203.0
Q ss_pred ccCccceeecCCCccEEEEEeC---CC--cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP---SG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~---~~--~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
..+..++||+|.||.||+|... .| -.||||.-+.+. +..+.+.|+.|..+|+.++|||||+++|+|.+. ..
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~---t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~ 465 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC---TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PM 465 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC---ChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ce
Confidence 4456678999999999999432 23 358888877644 345688999999999999999999999999875 57
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+|||.++.|-|..|++.+. ..++......++.||+.||+|||+. ++|||||..+||++....-||++|||+++.
T Consensus 466 WivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred eEEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhh
Confidence 99999999999999998764 3578888999999999999999999 999999999999999999999999999999
Q ss_pred cCCCCCCc-eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 915 LNPHSSNW-TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 915 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
++.+.+.. +...-+..|||||.+.-.+++.+||||.|||++||++. |..||.......... .+.. ..+++.
T Consensus 541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~-----~iEn--GeRlP~ 613 (974)
T KOG4257|consen 541 LEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG-----HIEN--GERLPC 613 (974)
T ss_pred ccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE-----EecC--CCCCCC
Confidence 87654432 22333678999999999999999999999999999997 999998665532111 1111 112221
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
++ .+...++.++.+||++||.+||.+.|+...|+
T Consensus 614 P~----nCPp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 614 PP----NCPPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred CC----CCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 11 22336678889999999999999999998775
|
|
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=309.49 Aligned_cols=251 Identities=22% Similarity=0.326 Sum_probs=194.8
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhh-hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--CCeeE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLF-DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--AQHSF 835 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~~~~ 835 (1031)
+|+..+.||+|+||.||+|.. .+++.||+|++...... ......+.+.+|+.++++++||||+++++++.+ +...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 688899999999999999955 56899999988653221 112335678899999999999999999999865 36788
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+++||+++++|.+++.... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++...
T Consensus 83 l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 9999999999999997643 478889999999999999999998 9999999999999999999999999999865
Q ss_pred CCCC---CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 916 NPHS---SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 916 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.... .......++..|+|||.+.+..++.++||||+||++|||++|+.||...... ............+.++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~ 232 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM----AAIFKIATQPTNPQLPS 232 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH----HHHHHHhcCCCCCCCch
Confidence 3211 1122345788999999999888999999999999999999999998644321 11111111111111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++ +||..+|++||+++||++
T Consensus 233 ------~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 233 ------HISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ------hcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 1122345555 688899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=292.48 Aligned_cols=246 Identities=23% Similarity=0.305 Sum_probs=203.0
Q ss_pred HHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
...++|...++||+|.||.|-.++ ..+++.||+|++++..+... .+...-..|-++++..+||.+..+...|+..+.+
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiak-dEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAK-DEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeeh-HHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 356889999999999999999994 55899999999988765432 3455667888999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||+.||.|..++.+.. .+++...+.+-..|+.||.|||++ +||.||+|.+|.++|.||++||+|||+++.
T Consensus 244 CFVMeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred EEEEEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchh
Confidence 99999999999999998754 478888899999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
--..+..+..++||+.|+|||++....|+.++|.|.+||++|||++|+.||-..+ .......+......++..+.+
T Consensus 318 ~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d--h~kLFeLIl~ed~kFPr~ls~-- 393 (516)
T KOG0690|consen 318 EIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD--HEKLFELILMEDLKFPRTLSP-- 393 (516)
T ss_pred cccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc--hhHHHHHHHhhhccCCccCCH--
Confidence 5455566778999999999999999999999999999999999999999964222 222222222222223333222
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCC
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARP 1020 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rp 1020 (1031)
+...++...+.+||++|.
T Consensus 394 --------eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 394 --------EAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred --------HHHHHHHHHhhcChHhhc
Confidence 233456677999999996
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=323.37 Aligned_cols=191 Identities=21% Similarity=0.311 Sum_probs=164.0
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
...+|++.+.||+|+||.||+|.. .+++.||+|+.... ....|+.++++++||||+++++++.+....+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----------ccHHHHHHHHhCCCCCCcChhheEEeCCeeE
Confidence 346799999999999999999965 46789999975432 1246899999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+|+||+. ++|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.++..
T Consensus 134 lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred EEEEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 9999995 58888876532 3588999999999999999999999 9999999999999999999999999999754
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P 964 (1031)
... .......||..|+|||++.+..++.++||||+||++|||+++..|
T Consensus 208 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 208 VVA-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred ccC-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 322 223446789999999999998999999999999999999986554
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=308.54 Aligned_cols=248 Identities=26% Similarity=0.418 Sum_probs=189.8
Q ss_pred ceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe-cCCeeEEEEE
Q 043316 765 YCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS-NAQHSFIVSE 839 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~-~~~~~~lv~e 839 (1031)
+.||+|+||.||+|... +...||+|++.... +....+.+.+|+.+++.++||||+++++++. .++..++|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEe
Confidence 35899999999999643 24579999875422 2234678889999999999999999999875 4566899999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+.+++|.+++.... ...++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 78 YMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152 (262)
T ss_pred cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCc
Confidence 999999999997543 2357788899999999999999999 99999999999999999999999999998653321
Q ss_pred C----CceeeccccCccccccccccCCCccccchhhhHHHHHHHhC-CCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 920 S----NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG-NHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 920 ~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
. ......++..|+|||.+.+..++.++|||||||++|||++| ..||..... .. .............+
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~--- 224 (262)
T cd05058 153 YYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FD---ITVYLLQGRRLLQP--- 224 (262)
T ss_pred ceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HH---HHHHHhcCCCCCCC---
Confidence 1 11233456789999999888899999999999999999995 455543221 11 11111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. ....+.+++.+||+.+|++||++.|+++.|++
T Consensus 225 ~~---~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~ 258 (262)
T cd05058 225 EY---CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ 258 (262)
T ss_pred Cc---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 11 12357789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=311.96 Aligned_cols=254 Identities=26% Similarity=0.383 Sum_probs=200.7
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCC--
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQ-- 832 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~-- 832 (1031)
..++|++.+.||+|++|.||+|.. .+++.+++|++.... ...+.+.+|+.+++++ +||||+++++++.+..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 457899999999999999999965 468899999986543 2356788999999999 6999999999997644
Q ss_pred ----eeEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEe
Q 043316 833 ----HSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVS 907 (1031)
Q Consensus 833 ----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 907 (1031)
..++||||+++++|.+++.... ....+++..++.++.|++.|++|||+. +++||||+|+||+++.++.++|+
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEEC
Confidence 4899999999999999986532 234688999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
|||.+..............++..|+|||++.. ..++.++||||+||++|+|++|+.||...... ......
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~ 230 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-----RALFKI 230 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-----HHHHHh
Confidence 99999876543333445668899999998753 34678999999999999999999998643221 111111
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... ........+.+++.+||..||++|||+.|+++
T Consensus 231 ~~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 231 PRNPPPTLK----SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hccCCCCCC----chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111111 11123346788999999999999999999975
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=314.06 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=202.5
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.. .+++.||+|++.... .....+.+.+|+++++.++||||+++++++......++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 5688889999999999999955 468999999876532 123467889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++... +.+++..+..++.+++.|+.|||+.+ +++||||||+||+++.++.++|+|||++.....
T Consensus 82 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 82 MEFMDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN 156 (284)
T ss_pred EecCCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence 9999999999998764 34788999999999999999999732 899999999999999999999999999875432
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc------hhhhhhHHHhhhhcCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF------SSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 991 (1031)
. ......++..|+|||++.++.++.++||||+||++|+|++|+.||+...... ...............+.++
T Consensus 157 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd06620 157 S--IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP 234 (284)
T ss_pred h--ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC
Confidence 2 1234568999999999988889999999999999999999999987543310 0111111111111111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
. ......+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~-----~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 235 S-----SDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred c-----hhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1 1123467889999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=316.22 Aligned_cols=244 Identities=23% Similarity=0.369 Sum_probs=196.3
Q ss_pred cceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 764 KYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
...||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|+||++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc----cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 44699999999999954 478999999986532 2235678899999999999999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++..........
T Consensus 102 ~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 174 (297)
T cd06659 102 GGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 174 (297)
T ss_pred CCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc
Confidence 9999988754 2478899999999999999999999 99999999999999999999999999997654433333
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....++..|+|||++.+..++.++||||+||++|||++|+.||...... .. .............. ......
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~---~~~~~~~~~~~~~~----~~~~~~ 245 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QA---MKRLRDSPPPKLKN----AHKISP 245 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HH---HHHHhccCCCCccc----cCCCCH
Confidence 4567899999999999888999999999999999999999997643321 11 11111111111110 111223
Q ss_pred HHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 1003 SIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+.+++.+|++.+|++||++.|+++
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhh
Confidence 5778899999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=306.19 Aligned_cols=253 Identities=27% Similarity=0.406 Sum_probs=207.7
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|++|.||+|... +++.||||++...... ...+.+.+|+.++.+++|||++++++++..++..++|+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE---EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 5788899999999999999654 5999999998765321 34678999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 79 EYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 999999999999765 357889999999999999999999 8 999999999999999999999999999987754
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........++..|+|||.+.+..++.++||||||+++|+|+||+.||..... ..................+. .
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~---~- 226 (264)
T cd06623 153 TLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICDGPPPSLPA---E- 226 (264)
T ss_pred CCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhcCCCCCCCc---c-
Confidence 44433356678999999999988899999999999999999999999865542 11222222222221111111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.....+.+++.+|++.+|++||++.|+++.
T Consensus 227 -~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 227 -EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 023467889999999999999999999863
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=306.82 Aligned_cols=252 Identities=26% Similarity=0.380 Sum_probs=202.8
Q ss_pred ccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--CCeeEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--AQHSFI 836 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~~~~l 836 (1031)
+|++.+.||.|+||.||+|. ..+++.||+|++...... ....+.+.+|++++++++||||+++++++.. +...++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT--EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC--HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEE
Confidence 47788999999999999995 457899999998654322 2345678899999999999999999998754 456899
Q ss_pred EEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhh-----hCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 837 VSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLH-----HDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
+|||+++++|.+++.... ....+++..++.++.|++.|++||| +. +++||||+|+||+++.++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccc
Confidence 999999999999997542 2346889999999999999999999 66 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++..............++..|+|||.+.+..++.++||||+|+++|+|++|+.||+.... .. ....+.......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~---~~~~~~~~~~~~~ 230 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQ---LASKIKEGKFRRI 230 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HH---HHHHHhcCCCCCC
Confidence 999775444323455789999999999988899999999999999999999999875431 11 1122222111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+. .....+.+++.+|++.+|++||++.||++
T Consensus 231 ~~------~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 231 PY------RYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred cc------ccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11 12346788999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=335.46 Aligned_cols=255 Identities=18% Similarity=0.192 Sum_probs=188.1
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC------CCceeeeeeeE
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR------HRNIIKFHGFC 828 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~niv~l~~~~ 828 (1031)
...++|.+.++||+|+||+||+|.. .+++.||||+++... .....+..|++++++++ |++++++++++
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 3457899999999999999999954 568899999986422 11233445666655554 55699999998
Q ss_pred ecC-CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCC----
Q 043316 829 SNA-QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEH---- 902 (1031)
Q Consensus 829 ~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~---- 902 (1031)
..+ +..++|||++ +++|.+++... ..+++..+..++.||+.||+|||+ . |||||||||+||+++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~ 273 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVD 273 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccc
Confidence 764 5788999988 67888888654 358889999999999999999997 5 999999999999998765
Q ss_pred ------------ceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCc
Q 043316 903 ------------EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVST 970 (1031)
Q Consensus 903 ------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~ 970 (1031)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||+....
T Consensus 274 ~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~ 350 (467)
T PTZ00284 274 PVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN 350 (467)
T ss_pred cccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 49999999886432 223456789999999999999999999999999999999999999875443
Q ss_pred cchhhhhhHHHhhhhcC-------------------CCCCC--CChh-----------HHHHHHHHHHHHHhhccCCCCC
Q 043316 971 NFSSFSNMITEINQNLD-------------------HRLPT--PSRD-----------VMDKLMSIMEVAILCLVESPEA 1018 (1031)
Q Consensus 971 ~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~-----------~~~~~~~l~~li~~cl~~dP~~ 1018 (1031)
.. ....+......++ ..... .... ..-....+.++|.+||++||++
T Consensus 351 ~~--~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 351 LE--HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred HH--HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 11 0001100000000 00000 0000 0001235679999999999999
Q ss_pred CCCHHHHHH
Q 043316 1019 RPTMKKVCN 1027 (1031)
Q Consensus 1019 Rps~~evl~ 1027 (1031)
|||++|+++
T Consensus 429 R~ta~e~L~ 437 (467)
T PTZ00284 429 RLNARQMTT 437 (467)
T ss_pred CCCHHHHhc
Confidence 999999986
|
|
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=308.34 Aligned_cols=239 Identities=21% Similarity=0.341 Sum_probs=186.9
Q ss_pred ceeecCCCccEEEEEeCC-------------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 765 YCIGKGRQGSVYKAELPS-------------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
+.||+|+||.||+|...+ ...||+|.+.... ....+.+.+|+.+++.++||||+++++++..+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH----RDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 358999999999996422 2358888875532 23456788999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-------e
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-------A 904 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-------~ 904 (1031)
...++||||+++++|..++.... ..+++..+.+++.||+.|++|||+. +|+||||||+||+++.++. +
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~ 151 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFI 151 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCcee
Confidence 99999999999999998886542 3578899999999999999999999 9999999999999987664 8
Q ss_pred EEeccccccccCCCCCCceeeccccCcccccccc-ccCCCccccchhhhHHHHHHH-hCCCCCCCcCccchhhhhhHHHh
Q 043316 905 HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH-MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~ell-tG~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
+++|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||...... .. ...
T Consensus 152 ~l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~~----~~~ 221 (262)
T cd05077 152 KLSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA--EK----ERF 221 (262)
T ss_pred EeCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh--HH----HHH
Confidence 99999998765322 2345788999999886 456899999999999999998 488886533221 11 111
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
.........+ ....+.+++.+||+.||.+||++.||++.+
T Consensus 222 ~~~~~~~~~~-------~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 222 YEGQCMLVTP-------SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HhcCccCCCC-------ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1111111111 123578899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=327.16 Aligned_cols=252 Identities=21% Similarity=0.260 Sum_probs=195.0
Q ss_pred hccCccceeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
.+|.+.+.||+|+||.||+|... .++.||+|.+... ....+|++++++++||||+++++++......+
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 57999999999999999999542 4678999987542 22458999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+|||++. ++|.+++... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.++|+|||+++..
T Consensus 163 lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EEehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 9999996 5888888433 4589999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc--hhhhhhHHHh---------
Q 043316 916 NPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF--SSFSNMITEI--------- 982 (1031)
Q Consensus 916 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~--~~~~~~~~~~--------- 982 (1031)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+.......
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 43322 1234678999999999998899999999999999999999999975433211 1111111100
Q ss_pred -------------hhhcCCCCCCCChhH--HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 -------------NQNLDHRLPTPSRDV--MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 -------------~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+....+ ... ......+.+++.+|++.||++|||+.|++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIP-PVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred ccchhHHHHHHhhcccccCCcccc-chhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000000000 000 011235778999999999999999999985
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=308.60 Aligned_cols=252 Identities=22% Similarity=0.408 Sum_probs=199.8
Q ss_pred hccCccceeecCCCccEEEEEeC-CCc----EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.+|.+.+.||+|+||.||+|... +++ .+|+|.+..... ......+.+|+..+++++||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS---PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 56888899999999999999653 333 689998865432 2345678899999999999999999999987 78
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++|+||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred eEEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccc
Confidence 899999999999999997653 2478999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCCce--eeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSSNWT--AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
.......... ...++..|+|||.+....++.++||||+|+++||+++ |+.||+..... .... .+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~---~~~~~~~~~~ 232 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPD---LLEKGERLPQ 232 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHH---HHhCCCCCCC
Confidence 7653322111 1223568999999988889999999999999999998 99998654321 1111 1111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+. . ....+.+++.+||..||++||++.++++.|+
T Consensus 233 ~~--~----~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 233 PP--I----CTIDVYMVLVKCWMIDAESRPTFKELINEFS 266 (279)
T ss_pred CC--C----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11 1 1135778899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=305.54 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=200.2
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhh-hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+|+..+.||+|++|.||+|... +++.||+|.+....... .....+.+.+|+.++++++||||+++++++.++...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999665 79999999986533111 122456789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997643 478899999999999999999999 999999999999999999999999999987543
Q ss_pred CCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......++..|+|||.+.... ++.++|+||+|+++|+|++|+.||...... ..............++.
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~---- 225 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV----AAVFKIGRSKELPPIPD---- 225 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH----HHHHHHHhcccCCCcCC----
Confidence 32 234456789999999987766 899999999999999999999998654321 11111111011111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.+|++||++.|+++
T Consensus 226 --~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 226 --HLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --CcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11235678899999999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=312.86 Aligned_cols=261 Identities=19% Similarity=0.250 Sum_probs=197.3
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
..+|.+.+.||+|+||.||+|.. .+++.||+|++..... ......+.+|+.+++.++|+||+++++++.+++..++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE---EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc---CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 46789999999999999999954 5789999999865431 1234467789999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|+||++ +++.+++.... ..+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++...
T Consensus 81 v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred EEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 999996 67776665432 3467788999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh------------
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN------------ 983 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~------------ 983 (1031)
..........++..|+|||.+.+. .++.++||||+||++|||++|+.||+............+....
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 333333445578999999998764 4788999999999999999999998755442221111111000
Q ss_pred -----hhcCCCC-CCCChh---HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 -----QNLDHRL-PTPSRD---VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 -----~~~~~~~-~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....... +..... .......+.+++.+|++.||++|||++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000 000000 0011246778999999999999999999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=307.61 Aligned_cols=257 Identities=25% Similarity=0.408 Sum_probs=201.6
Q ss_pred ccCccceeecCCCccEEEEEeCC--CcEEEEEEccchhhh------hhhhcHHHHHHHHHHHhc-CCCCceeeeeeeEec
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPS--GIIFAVKKFNSQLLF------DEMADQDEFLNEVLALTE-IRHRNIIKFHGFCSN 830 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~------~~~~~~~~~~~Ei~~l~~-l~h~niv~l~~~~~~ 830 (1031)
.|++.+.||+|+||.||+|.... ++.+|+|.+...... .......++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37778899999999999996644 789999988543211 112234567788888865 789999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
++..++||||+++++|.+++... .....+++..++.++.|++.|++|||+ . +++||||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999988542 123458889999999999999999996 5 899999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
||.+....... ......++..|+|||...++.++.++||||||+++|||++|+.||...... ............
T Consensus 158 fg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~ 231 (269)
T cd08528 158 FGLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-----SLATKIVEAVYE 231 (269)
T ss_pred ccceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-----HHHHHHhhccCC
Confidence 99998765433 334566889999999999888999999999999999999999997533221 111111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
... . ......+.+++.+||+.||++||++.|+.++++
T Consensus 232 ~~~---~--~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 232 PLP---E--GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCC---c--ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111 1 012246788999999999999999999999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=307.36 Aligned_cols=252 Identities=22% Similarity=0.285 Sum_probs=196.5
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhh-hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--Cee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLF-DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~ 834 (1031)
.+|++.+.||+|+||.||+|.. .+++.||+|++...... ......+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999955 56899999988543211 1123456788999999999999999999998764 567
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999987543 367888999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC---CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 915 LNPHS---SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 915 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
..... .......++..|+|||.+.+..++.++|||||||++|||++|+.||...... .. ...... ....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~-~~~~~~--~~~~~ 228 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AA-IFKIAT--QPTNP 228 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HH-HHHHhc--CCCCC
Confidence 53211 1223345788999999998888999999999999999999999998644221 11 111111 11111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+ ......+.+++.+|+. +|++||+++|+++
T Consensus 229 ~~~---~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 229 VLP---PHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CCc---hhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 111 1223356778888985 9999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=310.37 Aligned_cols=247 Identities=26% Similarity=0.321 Sum_probs=200.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|++|.||+|.. .+++.||+|++...... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-KLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence 3688899999999999999955 46899999998764322 223457789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. |++||||+|+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 80 MEYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999997653 578899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .....+++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ......... ....++..
T Consensus 154 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~-~~~~~~~~---- 220 (290)
T cd05580 154 R---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQIYEKILE-GKVRFPSF---- 220 (290)
T ss_pred C---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhc-CCccCCcc----
Confidence 3 2344678999999999888889999999999999999999999764432 111111111 11111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||.+|+ +++|+++
T Consensus 221 --~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 221 --FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred --CCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 123677899999999999999 7777763
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=305.22 Aligned_cols=252 Identities=25% Similarity=0.385 Sum_probs=202.4
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|...+.||+|+||.||+|.. .+++.||+|.++..... ....+.+.+|++++++++|+||+++++++.+.+..++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEE
Confidence 478889999999999999964 47899999998765422 345778999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 79 EYCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred ecCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 9999999999997643 367889999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCc----eeeccccCccccccccccC---CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 919 SSNW----TAFAGTFGYAAPEIAHMMR---ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 919 ~~~~----~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
.... ....++..|+|||++.+.. ++.++||||||+++||+++|+.||......... .........+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~ 228 (264)
T cd06626 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQI----MFHVGAGHKPPIP 228 (264)
T ss_pred CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHH----HHHHhcCCCCCCC
Confidence 2221 1345788999999988766 789999999999999999999998654321111 1111111122222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ......+.+++.+||+.+|++||++.|++.
T Consensus 229 ~~----~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 229 DS----LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred cc----cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11 111335678999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=314.63 Aligned_cols=260 Identities=20% Similarity=0.304 Sum_probs=199.9
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|+..+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD--KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc--chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEE
Confidence 36888899999999999999664 6899999998654321 12356788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||++++++.++..... .+++.++..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 79 FEFVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred EecCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 99999999988776532 378999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh-------h-----
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN-------Q----- 984 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~-------~----- 984 (1031)
.........++..|+|||++.+ ..++.++||||||+++|||++|+.||+..... ........... .
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 153 PGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred CccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccc
Confidence 4333344567899999999875 34678999999999999999999997643321 11111110000 0
Q ss_pred -----hcCCCCCCCCh---hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 -----NLDHRLPTPSR---DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 -----~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+....... ........+.+++.+||+.+|++||+++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000000 00011346788999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=311.10 Aligned_cols=250 Identities=26% Similarity=0.391 Sum_probs=202.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc----chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 6788999999999999999954 578899999985432 23456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++++|.+++... .+++.++..++.|++.|++|||+. |++||||||+||+++.++.++|+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 95 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred EecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999998753 367889999999999999999999 999999999999999999999999999886654
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........+++.|+|||.+.++.++.++||||||+++|++++|+.||......... .. ......+... ..
T Consensus 168 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~----~~~~~~~~~~----~~ 238 (293)
T cd06647 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YL----IATNGTPELQ----NP 238 (293)
T ss_pred cccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-ee----hhcCCCCCCC----Cc
Confidence 443334456888999999998888999999999999999999999998644331110 00 0000001111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
......+.+++.+||+.+|++||++.|++..
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 239 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122357789999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=306.98 Aligned_cols=239 Identities=23% Similarity=0.400 Sum_probs=186.4
Q ss_pred eeecCCCccEEEEEeCC-------------------------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc
Q 043316 766 CIGKGRQGSVYKAELPS-------------------------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n 820 (1031)
.||+|+||.||+|.... ...||+|++.... ......+.+|+.++++++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH----RDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH----HHHHHHHHHHHHHHhcCCCCC
Confidence 58999999999995311 1358899886542 223567889999999999999
Q ss_pred eeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC
Q 043316 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 821 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
|+++++++.+....++||||+++|+|..+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~ 152 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLAR 152 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEec
Confidence 9999999999999999999999999999987542 3578899999999999999999999 9999999999999986
Q ss_pred CC-------ceEEeccccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHH-hCCCCCCCcCcc
Q 043316 901 EH-------EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVI-KGNHPRDYVSTN 971 (1031)
Q Consensus 901 ~~-------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell-tG~~P~~~~~~~ 971 (1031)
.+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||......
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred cCcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 54 3899999988654221 22356788999998865 56799999999999999995 689997654332
Q ss_pred chhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 972 FSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. ..... . ....+... ...+.+++.+||+.+|++|||++++++.|.
T Consensus 229 ~~--~~~~~---~--~~~~~~~~------~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 EK--ERFYE---K--KHRLPEPS------CKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HH--HHHHH---h--ccCCCCCC------ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11 11111 0 11111111 125778999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=307.63 Aligned_cols=248 Identities=28% Similarity=0.427 Sum_probs=199.7
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC---CCceeeeeeeEecCCeeE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~~~~~~~~~~~ 835 (1031)
.|+..+.||+|+||.||+|.. .+++.||+|.++.... ....+++.+|+.++++++ |||++++++++.++...+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP---DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC---chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE
Confidence 467788899999999999964 6789999999865431 234567889999999886 999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++++|.++++.. .+++..+..++.|++.|++|||+. ||+||||+|+||+++.++.++|+|||.+...
T Consensus 79 lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred EEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 999999999999998653 478899999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
...........|+..|+|||.+.++ .++.++||||+||++|+|++|+.||...... ...........+.++..
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~- 225 (277)
T cd06917 152 NQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLIPKSKPPRLEDN- 225 (277)
T ss_pred CCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhccccCCCCCCCcc-
Confidence 5544334455788999999988654 4688999999999999999999998644321 11111111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++.+++.+||+.||++||++.|+++
T Consensus 226 ----~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 226 ----GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ----cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 12346788999999999999999999975
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=312.51 Aligned_cols=262 Identities=21% Similarity=0.249 Sum_probs=200.1
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh-hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE-MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+|...+.||+|++|.||+|.. .+++.||||++........ ......+.+|++++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477788999999999999965 4789999999976543211 12345677899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+ +++|.+++.... ..+++..+..++.||++||+|||++ ||+||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 889999997653 3588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh------------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ------------ 984 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~------------ 984 (1031)
.........++..|+|||.+.+ ..++.++||||+||++|||++|..||...... ............
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccc
Confidence 4333344456788999998865 45788999999999999999997776543321 111111100000
Q ss_pred --hcC-CCCCCCC--hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 985 --NLD-HRLPTPS--RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 985 --~~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
... ...+... .........+.+++.+||++||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000 0000000 0001123467899999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=305.21 Aligned_cols=252 Identities=26% Similarity=0.401 Sum_probs=198.3
Q ss_pred hccCccceeecCCCccEEEEEeCC----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|.+.+.||+|+||.||+|...+ ...||||....... ....+.+.+|+.++++++||||+++++++.+ ...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS---PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC---HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 457888999999999999996533 35789998865431 2345688999999999999999999999876 456
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++++|||++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeee
Confidence 89999999999999997643 2478999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 915 LNPHSSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 915 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
....... .....++..|+|||.+.+..++.++||||+|+++||+++ |..||...... . .............+.
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~---~~~~~~~~~~~~~~~ 231 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--D---VIGRIENGERLPMPP 231 (270)
T ss_pred cccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--H---HHHHHHcCCcCCCCC
Confidence 6433211 122234568999999988889999999999999999996 99998644331 1 111111111111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.....+.+++.+|+..+|++|||+.|+++.|+
T Consensus 232 ------~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 232 ------NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred ------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11236778899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=308.94 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=198.3
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|...+.||+|++|.||+|.. .+++.+|+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 44557899999999999964 578999999875432 2235568899999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++++|.+++... .+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 97 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 97 FLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred ccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 99999999998762 478899999999999999999999 99999999999999999999999999887654333
Q ss_pred CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
.......++..|+|||...+..++.++||||+|+++|||++|+.||...... ...........+..... ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~----~~ 240 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL-----QAMKRIRDNLPPKLKNL----HK 240 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH-----HHHHHHHhcCCCCCccc----cc
Confidence 3334456889999999998888999999999999999999999997543221 11111111111111111 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 1000 KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.+|++||++.|+++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 2236788999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=305.58 Aligned_cols=254 Identities=23% Similarity=0.390 Sum_probs=200.7
Q ss_pred ccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhh--hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
+|+..+.||+|++|.||+|. ..+++.||+|++...... ......+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47788899999999999995 467899999998653311 112235788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~ 915 (1031)
|+||+++++|.++++... .+++..+..++.|++.|++|||+. |++||||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999997543 478899999999999999999999 999999999999998876 5999999999876
Q ss_pred CCCCC----CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh-hcCCCC
Q 043316 916 NPHSS----NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ-NLDHRL 990 (1031)
Q Consensus 916 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~ 990 (1031)
..... ......++..|+|||.+.+..++.++||||+|+++|+|++|..||...... ........... ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 232 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIASATTAPSI 232 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhccCCCCCC
Confidence 43321 112346788999999998888999999999999999999999998643321 11111111111 111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+ ......+.+++.+|++.+|++||++.|+++
T Consensus 233 ~------~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 233 P------EHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred c------hhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1 122346788999999999999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=309.21 Aligned_cols=253 Identities=25% Similarity=0.361 Sum_probs=194.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHH-HhcCCCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLA-LTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||.||+|.. .+|+.||+|+++..... ....++..|+.. ++..+||||+++++++..++..++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~l 77 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS---QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWI 77 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc---HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEE
Confidence 3688899999999999999955 47999999998764321 223455666665 566789999999999999999999
Q ss_pred EEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||++ ++|.++++.. .....+++..++.++.||+.|++|||+++ +++||||||+||+++.++.+||+|||.+...
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 999997 6888777543 22346899999999999999999999853 8999999999999999999999999999865
Q ss_pred CCCCCCceeeccccCccccccccc----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHM----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
... .......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||.......... ...........+
T Consensus 155 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 229 (283)
T cd06617 155 VDS-VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL----KQVVEEPSPQLP 229 (283)
T ss_pred ccc-cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH----HHHHhcCCCCCC
Confidence 322 12233567889999998865 346889999999999999999999986433221111 111111122221
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .....+.+++.+||+.+|++||+++++++
T Consensus 230 ~~-----~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 230 AE-----KFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred cc-----ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 12236788999999999999999999985
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=305.04 Aligned_cols=238 Identities=25% Similarity=0.422 Sum_probs=188.9
Q ss_pred ceeecCCCccEEEEEeCC-C----------cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 765 YCIGKGRQGSVYKAELPS-G----------IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
+.||+|+||.||+|...+ + ..+++|.+.... .....+.+|+.++++++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CC
Confidence 368999999999996643 3 257778765432 126788999999999999999999999988 77
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-------ceEE
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-------EAHV 906 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-------~~kl 906 (1031)
.++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEe
Confidence 8999999999999999986542 578899999999999999999999 999999999999999888 7999
Q ss_pred eccccccccCCCCCCceeeccccCcccccccccc--CCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhh
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM--RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
+|||++..... .....++..|+|||++.+. .++.++||||+|+++|||++ |..||...... .......
T Consensus 150 ~Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~--- 220 (259)
T cd05037 150 SDPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQ--- 220 (259)
T ss_pred CCCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHh---
Confidence 99999986543 2234567789999998876 78999999999999999999 57776544321 1111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.....+.... ..+.+++.+||..+|.+|||+.|+++.|+
T Consensus 221 --~~~~~~~~~~------~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 --DQHRLPMPDC------AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --cCCCCCCCCc------hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111111111 47788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=307.13 Aligned_cols=249 Identities=24% Similarity=0.430 Sum_probs=195.1
Q ss_pred eeecCCCccEEEEEeCC-------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 766 CIGKGRQGSVYKAELPS-------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.||+|+||.||+|+..+ ++.+|+|.+..... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT---DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc---hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 58999999999996532 25799998865321 234667899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCC----ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-----ceEEecc
Q 043316 839 EYLDRGSLTTILKDDA----AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-----EAHVSDF 909 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~Df 909 (1031)
||+++++|.+++.... ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .++++||
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999999999997532 123478899999999999999999998 999999999999999887 8999999
Q ss_pred ccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 910 GIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 910 g~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
|++........ ......++..|+|||.+.++.++.++|||||||++|||++ |+.||...... .. ...+...
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~---~~~~~~~- 229 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EV---LQHVTAG- 229 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HH---HHHHhcC-
Confidence 99976532211 1122345678999999999899999999999999999998 99997643321 11 1111111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...... . .....+.+++.+||+.+|++||+++++.+.|++
T Consensus 230 -~~~~~~-~---~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 -GRLQKP-E---NCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred -CccCCc-c---cchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111111 1 122467789999999999999999999999874
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=312.91 Aligned_cols=255 Identities=22% Similarity=0.231 Sum_probs=197.9
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|+||.||+|.. .+++.||+|.+..... ......+.+.+|+++++.++||||+++++++..++..++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL-ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh-hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 688889999999999999955 4688999999876532 12234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.++++... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999997643 478899999999999999999999 9999999999999999999999999998642110
Q ss_pred CC---------------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 919 SS---------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 919 ~~---------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
.. ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... .... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--~~~~---~~~~ 229 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--EELF---GQVI 229 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHH---HHHH
Confidence 00 01123567889999999888899999999999999999999999753322 1111 1111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
... ...+.... .....+.+++.+||+.||++||++.++.+.++
T Consensus 230 ~~~-~~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 230 SDD-IEWPEGDE---ALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred hcc-cCCCCccc---cCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 110 01111000 12235678999999999999999665555543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=310.34 Aligned_cols=260 Identities=20% Similarity=0.264 Sum_probs=198.3
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|++|.||+|+. .+++.||||++..... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc--ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence 478889999999999999965 4789999999865432 1223467889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+. ++|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+......
T Consensus 79 e~~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 79 EFLH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred eccc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9996 58888886543 24578999999999999999999999 9999999999999999999999999999866543
Q ss_pred CCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh---------------
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI--------------- 982 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~--------------- 982 (1031)
........++..|+|||.+.+.. ++.++||||||+++|||+||+.||...... ..........
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 154 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhhhhHHH
Confidence 33334445688999999887644 588999999999999999999998644321 1111111100
Q ss_pred --hhhcCCCCCCCChhH-HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 --NQNLDHRLPTPSRDV-MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 --~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+........... ......+.+++.+|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 233 DYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000000 011235678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=311.40 Aligned_cols=258 Identities=23% Similarity=0.315 Sum_probs=200.5
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|++|.||+|... +++.||||+++.... .....+.+.+|++++++++|+||+++++++.+++..++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED--DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc--cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 6888999999999999999654 688999999865432 2234578899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||++++.+..+.... ..+++.+++.++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 80 EYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 999987777666543 2478899999999999999999999 9999999999999999999999999999876544
Q ss_pred CC-CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh-----------
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN----------- 985 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~----------- 985 (1031)
.. ......++..|+|||++.+. .++.++||||+|+++|+|++|+.||....... ..... ......
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 231 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLI-QKCLGPLPPSHQELFSS 231 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH-HHHhCCCCHHHhhhccc
Confidence 32 33445678899999999887 78999999999999999999999986443211 00000 000000
Q ss_pred ---cCC-CCCCCC--hhHH-----HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 ---LDH-RLPTPS--RDVM-----DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ---~~~-~~~~~~--~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... ..+... .... ....++.+++++||+.+|++||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 232 NPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 000000 0000 01346889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=306.22 Aligned_cols=240 Identities=23% Similarity=0.387 Sum_probs=187.5
Q ss_pred ceeecCCCccEEEEEeC-C-------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 765 YCIGKGRQGSVYKAELP-S-------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
+.||+|+||.||+|... . ...+|+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH----RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh----HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEE
Confidence 35899999999999543 2 2347888775432 2345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc--------eEEec
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE--------AHVSD 908 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~D 908 (1031)
||||+++|+|.++++.... .+++..+..++.||+.|++|||+. +|+||||||+||+++.++. ++++|
T Consensus 77 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred EEecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecc
Confidence 9999999999999976532 578899999999999999999999 9999999999999987765 69999
Q ss_pred cccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCC-CCCCCcCccchhhhhhHHHhhhhc
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGN-HPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~-~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
||.+...... ....++..|+|||++.+. .++.++||||+||++|||++|. .||....... . ..... .
T Consensus 152 ~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~---~~~~~--~ 220 (258)
T cd05078 152 PGISITVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--K---LQFYE--D 220 (258)
T ss_pred cccccccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--H---HHHHH--c
Confidence 9998765322 234578899999998764 5789999999999999999985 5544322210 0 00000 1
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...++.. ...++.+++.+||+.||++|||++|+++.|.
T Consensus 221 ~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 RHQLPAP------KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred cccCCCC------CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1112211 1235788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=305.09 Aligned_cols=247 Identities=26% Similarity=0.400 Sum_probs=199.8
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
-|+..+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+..+++++||||+++++++.++...++||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 366778899999999999954 5789999998764332 223567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 82 EYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred EeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 999999999998643 478899999999999999999999 9999999999999999999999999999866443
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
........++..|+|||.+.+..++.++||||+||++|+|++|..||...... .....+.....+....
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~------ 223 (277)
T cd06641 155 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFLIPKNNPPTLEG------ 223 (277)
T ss_pred hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHHHhcCCCCCCCc------
Confidence 32333456788999999998888899999999999999999999997643321 1111111111111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+|++.+|.+||++.++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 12245778899999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=300.78 Aligned_cols=250 Identities=20% Similarity=0.302 Sum_probs=200.9
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|++|.||+|.. .+++.+|+|++...... ......+.+|++++++++||||+++++.+..++..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT--KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc--cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEE
Confidence 478889999999999999954 57899999998764322 234678899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++.... ...+++..+..++.+++.|++|||++ +++||||+|+||+++.++ .+|++|||.+.....
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 79 EYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred ecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 9999999999997643 23478899999999999999999999 999999999999998654 589999999987643
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.. ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||+..... . .............+.
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~----- 223 (256)
T cd08220 155 KS-KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--A---LVLKIMSGTFAPISD----- 223 (256)
T ss_pred Cc-cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--H---HHHHHHhcCCCCCCC-----
Confidence 32 223456788999999999888899999999999999999999997644321 1 111111111111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.||++|||+.|+++
T Consensus 224 -~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 -RYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 12235778999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=300.89 Aligned_cols=251 Identities=27% Similarity=0.450 Sum_probs=199.2
Q ss_pred cCccceeecCCCccEEEEEeCC-----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 761 FGEKYCIGKGRQGSVYKAELPS-----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
|++.+.||.|+||.||+|...+ +..||+|++..... ....+.+.+|+.+++.++|+||+++++++.+.+..+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD---EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC---hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeE
Confidence 3567889999999999996643 38899999865432 114678899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
++|||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+...
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred EEEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceec
Confidence 99999999999999976432 2278999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCce-eeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 916 NPHSSNWT-AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 916 ~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
........ ...++..|+|||.+.+..++.++||||+|+++|+|++ |..||..... ...............+.
T Consensus 154 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~- 227 (258)
T smart00219 154 YDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----EEVLEYLKKGYRLPKPE- 227 (258)
T ss_pred ccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCCC-
Confidence 54322111 2336789999999988889999999999999999998 7888654222 11111111111111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
. ....+.+++.+|+..||++|||+.|+++.|
T Consensus 228 --~---~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 228 --N---CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --c---CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1 234678899999999999999999999865
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=313.76 Aligned_cols=253 Identities=23% Similarity=0.306 Sum_probs=201.7
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|++|+||+|... +++.||+|.+....... ....+.+.+|+++++.++||||+++++.+.++...++||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK-RNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccch-HHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 6888899999999999999654 58999999997654322 234567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+.+++|.+++.... ...+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987543 24688899999999999999999999 9999999999999999999999999998765322
Q ss_pred CCC-----------------------------ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 919 SSN-----------------------------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 919 ~~~-----------------------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
... .....|+..|+|||++.+..++.++||||+|+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 110 112357889999999998889999999999999999999999986443
Q ss_pred ccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCC----HHHHHH
Q 043316 970 TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT----MKKVCN 1027 (1031)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~evl~ 1027 (1031)
.. ..+ ..... .....+.. ......+.+++.+|++.||++||| ++|+++
T Consensus 237 ~~-~~~----~~~~~-~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RD-ETF----SNILK-KEVTFPGS----PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hH-HHH----HHHhc-CCccCCCc----cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 31 111 11111 01111111 112346889999999999999999 777765
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=306.92 Aligned_cols=251 Identities=27% Similarity=0.402 Sum_probs=203.0
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.+.|+..+.+|+|++|.||+|... +++.||+|++..... ..+.+.+|++.+++++|+|++++++++......++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 355777888999999999999664 689999999865431 46678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|+||+++++|.+++.... ..+++..+..++.|++.|++|||+. |++|+||+|+||+++.++.++|+|||.+....
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 999999999999998754 3588999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ...............
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~---- 238 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-----ALFLITTKGIPPLKN---- 238 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhcCCCCCcc----
Confidence 43333334457889999999988889999999999999999999999976433211 011111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++.+|++.+|.+||++.++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1112346788999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=304.58 Aligned_cols=251 Identities=28% Similarity=0.353 Sum_probs=202.7
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|+||.||+|... +++.||+|++.+.... .....+.+.+|++++++++||||+++++++.++...++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCV-EKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhc-chhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 4788899999999999999654 6899999999764321 2234678999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 80 DLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred eCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 999999999999765 3578899999999999999999999 9999999999999999999999999999876433
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
. ......++..|+|||.+.+..++.++|+||+|+++|+|++|+.||....... .......... .....+.
T Consensus 154 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~~~~~------ 223 (258)
T cd05578 154 T-LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIRAKQET-ADVLYPA------ 223 (258)
T ss_pred c-cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHHHHhcc-ccccCcc------
Confidence 2 2344567889999999988889999999999999999999999987554321 1111111111 1111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCH--HHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTM--KKVCN 1027 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~--~evl~ 1027 (1031)
.....+.+++.+||+.||.+||++ +|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 112467789999999999999999 77653
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=303.85 Aligned_cols=256 Identities=25% Similarity=0.386 Sum_probs=198.4
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh------hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD------EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
+|...+.||+|++|.||+|.. .+++.||+|+++...... .....+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999954 578999999886432111 1112356888999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++|+||+++++|.++++.. ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999999765 3578889999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC--CceeeccccCccccccccccC--CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 913 KFLNPHSS--NWTAFAGTFGYAAPEIAHMMR--ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 913 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
........ ......++..|+|||.+.... ++.++||||+|+++||+++|+.||....... ............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~ 231 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA----AMFKLGNKRSAP 231 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH----HHHHhhccccCC
Confidence 86532211 122345788999999987654 7899999999999999999999975332211 111111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+. .........+.+++.+|++.||++||++.||++
T Consensus 232 ~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 232 PIPP--DVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCc--cccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1111 111122346788999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=310.58 Aligned_cols=261 Identities=19% Similarity=0.253 Sum_probs=198.7
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--Cee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~ 834 (1031)
.++|++.+.||+|+||.||+|... +++.+|+|.++..... ......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI 81 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence 357888999999999999999664 6899999998754321 22344677899999999999999999998877 899
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++|+||+++ +|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+..
T Consensus 82 ~lv~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred EEEehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceee
Confidence 999999974 8988887643 2588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh----------
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN---------- 983 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~---------- 983 (1031)
............++..|+|||.+.+.. ++.++||||+|+++|||++|+.||....... ..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (293)
T cd07843 156 YGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTPTEKIWPGF 234 (293)
T ss_pred ccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHh
Confidence 654433334456788999999887644 6889999999999999999999986543211 1110000000
Q ss_pred ----hhc-----CCCCCCCChhHHH--HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 ----QNL-----DHRLPTPSRDVMD--KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ----~~~-----~~~~~~~~~~~~~--~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... ............. ....+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 235 SELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 0000000000000 1235778999999999999999999985
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=309.71 Aligned_cols=252 Identities=24% Similarity=0.458 Sum_probs=196.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCc----EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.+|+..+.||+|+||.||+|.+ .+++ .||+|.+..... ......+.+|+.++++++||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG---PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence 5678888999999999999964 3444 578888765321 22345688999999999999999999998764 4
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++++||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccc
Confidence 679999999999999987643 3478889999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
........ .....++..|+|||.+.+..++.++|||||||++|||++ |+.||..... ........ . ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~---~--~~~~ 230 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLE---K--GERL 230 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---C--CCCC
Confidence 76433221 122345678999999988889999999999999999997 8999764322 11111111 1 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+... .....+.+++.+||..+|++||+++|+++.|+
T Consensus 231 ~~~~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 231 PQPP----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred CCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 11235778899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=308.00 Aligned_cols=260 Identities=18% Similarity=0.305 Sum_probs=200.6
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|++|.||+|.. .+++.||||+++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE---EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc---ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEE
Confidence 478889999999999999966 4689999999876432 223566788999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++ +|.+++........+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 99985 8888887654445689999999999999999999999 9999999999999999999999999999866443
Q ss_pred CCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH-----------Hhh--h
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT-----------EIN--Q 984 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~-----------~~~--~ 984 (1031)
........++..|+|||++.+. .++.++||||+||++|+|++|+.||....... ....... ... .
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCc
Confidence 3333445678899999987664 46889999999999999999999987554321 1111000 000 0
Q ss_pred hcCCCCCCCChhH-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 NLDHRLPTPSRDV-----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+...... ......+.+++.+|++.||.+||+++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0001111111000 011245779999999999999999999975
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=285.09 Aligned_cols=262 Identities=21% Similarity=0.342 Sum_probs=204.3
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeE
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFC 828 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~ 828 (1031)
++++.+.++ +.||+|+|+.|..+ ...+|..||||++.++. -....++.+|++++.+.+ |+||++++++|
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~----gHsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP----GHSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCC----chHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 455555544 46999999999999 66799999999998763 235778899999999996 99999999999
Q ss_pred ecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eE
Q 043316 829 SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AH 905 (1031)
Q Consensus 829 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~k 905 (1031)
+++...|+|||-|.||+|..++..+. -+++.++.++.++|+.||.|||.+ ||.|||+||+||+...... +|
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cccceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCcee
Confidence 99999999999999999999998754 488899999999999999999999 9999999999999976554 89
Q ss_pred EeccccccccCCC-------CCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCcc--
Q 043316 906 VSDFGIAKFLNPH-------SSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN-- 971 (1031)
Q Consensus 906 l~Dfg~a~~~~~~-------~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~-- 971 (1031)
||||.+..-+... .....+.+|+..|||||+.. ...|+.+.|.||+|||+|-|+.|..||...=..
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 9999887643211 11234678999999999753 235788999999999999999999999644221
Q ss_pred ---chhhhhhHH-Hh-hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 972 ---FSSFSNMIT-EI-NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 972 ---~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+.....+ .+ ....+..+..+..++.....+..+++...+..||.+|-++.++++
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 111111111 11 112223333334455555556778888999999999999988865
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=289.19 Aligned_cols=204 Identities=22% Similarity=0.323 Sum_probs=170.6
Q ss_pred HhccCccceeecCCCccEEEEEeC---CC--cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-C
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP---SG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN-A 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~--~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-~ 831 (1031)
...|+....||+|.||.||+|... +. ..+|+|+++..... ..-.....||+..+++++||||+.+..++.. +
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~--tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG--TGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCC--CCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 456899999999999999999332 22 37999999765321 1234567899999999999999999999876 8
Q ss_pred CeeEEEEEeccCCCchhhcccCC--ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC----CceE
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDA--AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE----HEAH 905 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~k 905 (1031)
..+++++||.+. +|...++.+. ....++...+.+|+.||+.|+.|||++ -|+||||||.||++..+ |.||
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeE
Confidence 899999999987 8888886543 234678889999999999999999999 79999999999999988 8899
Q ss_pred EeccccccccCCCCC---CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCC
Q 043316 906 VSDFGIAKFLNPHSS---NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDY 967 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~ 967 (1031)
|+|||+++.+..+-. .....+.|.+|+|||.+.|. .|+++.|||+.|||+.||+|-++-|..
T Consensus 177 IaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred eecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 999999998865433 23457789999999998875 589999999999999999998766643
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=301.67 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=196.0
Q ss_pred cCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----
Q 043316 761 FGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ---- 832 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~---- 832 (1031)
|.+.+.||+|+||.||+|... +++.||||++..... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF--SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC--ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 566788999999999999642 468999999866432 1234667889999999999999999999886532
Q ss_pred --eeEEEEEeccCCCchhhcccCC---ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEe
Q 043316 833 --HSFIVSEYLDRGSLTTILKDDA---AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVS 907 (1031)
Q Consensus 833 --~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 907 (1031)
..++++||+++|+|.+++.... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEEC
Confidence 3478999999999988874321 123478889999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhh
Q 043316 908 DFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984 (1031)
Q Consensus 908 Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 984 (1031)
|||.++....... ......++..|++||.+.+..++.++||||+||++|||++ |+.||...... .. ......
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~---~~~~~~ 230 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EI---YNYLIK 230 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HH---HHHHHc
Confidence 9999986543221 1122345678999999988889999999999999999999 88887543321 11 111111
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......+. .....+.+++.+|++.+|++||++.|+++.|++
T Consensus 231 ~~~~~~~~------~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 231 GNRLKQPP------DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred CCcCCCCC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11111111 122468889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=307.45 Aligned_cols=259 Identities=21% Similarity=0.274 Sum_probs=197.8
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|++.+.||+|++|.||+|.. .+|+.||+|++..... .....+.+.+|++++++++|||++++++++.+++..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE--DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc--cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence 56778999999999999954 5799999999865432 12234568899999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|++ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 79 FLD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred ccC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 995 689998876432 3578999999999999999999999 99999999999999999999999999998664333
Q ss_pred CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH-----------------
Q 043316 920 SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE----------------- 981 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~----------------- 981 (1031)
.......++..|+|||++.+. .++.++||||+|+++|+|++|+.||....... ........
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchh
Confidence 333444568899999987664 46889999999999999999999986543311 11111100
Q ss_pred hhhhcCCCC-CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 INQNLDHRL-PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... .............+.+++.+|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000 0000000111246788999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=306.94 Aligned_cols=259 Identities=20% Similarity=0.306 Sum_probs=200.5
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|++|.||+|.. .+++.||||++...... ....+.+.+|+.++++++||||+++++++.++...++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE--GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc--chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence 478889999999999999965 47899999998764321 223567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+ +++|.+++.... ..+++.+++.++.||+.||+|||+. +++|+||||+||+++.++.++|+|||.+......
T Consensus 79 e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 79 EYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred ccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 999 999999987543 4588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh-----------
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN----------- 985 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~----------- 985 (1031)
.. ......++..|+|||++.+. .++.++||||+|+++|||++|+.||...... ..+..........
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07832 153 EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNEETWPGLTSL 231 (286)
T ss_pred CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCChHHHhhccCc
Confidence 21 23445688999999998654 4689999999999999999998777543321 1111111110000
Q ss_pred -------cCCCCCCCC-hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 -------LDHRLPTPS-RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 -------~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... ....+....+.+++.+|++.||.+|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 000112357889999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=299.95 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=200.7
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|+||.||+|.. .++..+|+|.+..... .....+.+.+|++++++++|+||+++++++......++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc--cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEE
Confidence 477889999999999999955 4688999999866432 1234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-eEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-AHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++. +|++|||.+.....
T Consensus 79 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 79 EYCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred ecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 99999999999976432 3478899999999999999999999 9999999999999998864 69999999987654
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........|++.|+|||+..+..++.++||||+|+++|||++|+.||...... ...............+
T Consensus 155 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~----- 224 (257)
T cd08225 155 SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-----QLVLKICQGYFAPISP----- 224 (257)
T ss_pred CcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHhcccCCCCCC-----
Confidence 333333456889999999998888999999999999999999999997643221 1111111111111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+|++.+|++|||+.|+++
T Consensus 225 -~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 225 -NFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -CCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 11235778899999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=279.30 Aligned_cols=251 Identities=24% Similarity=0.335 Sum_probs=199.9
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv 837 (1031)
+.+....||.|..|.||+++. .+|...|||.+.+.. +.++.+++...+.++..-+ +|+||+.+|||..+..+++.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~---Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic 169 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC 169 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC---CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence 344556699999999999955 468999999997753 3445677888888876664 99999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||.|. ..++.++++.. +++++..+-++...++.||.||.+++ +|+|||+||+||++|+.|++|+||||.+-++..
T Consensus 170 MelMs-~C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 170 MELMS-TCAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHHHH-HHHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec
Confidence 99985 35666666543 35778888899999999999999886 999999999999999999999999999987753
Q ss_pred CCCCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
. ...+..+|-+.|||||.+.- ..|+-++||||||+.++|+.||+.||......+..+ ..+....++.++..
T Consensus 245 S-kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~l----tkvln~ePP~L~~~- 318 (391)
T KOG0983|consen 245 S-KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVL----TKVLNEEPPLLPGH- 318 (391)
T ss_pred c-cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHH----HHHHhcCCCCCCcc-
Confidence 3 33466788899999998753 467889999999999999999999988765543333 22333334444332
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+++..|+++|+.+||...++++
T Consensus 319 ---~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 319 ---MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ---cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 224456788899999999999999998875
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=303.40 Aligned_cols=247 Identities=23% Similarity=0.285 Sum_probs=194.3
Q ss_pred eecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCC
Q 043316 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845 (1031)
Q Consensus 767 lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 845 (1031)
||+|+||+||+|. ..+++.||+|.+....... ....+.+.+|++++++++||||+++++++...+..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK-RKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh-hhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 6899999999995 4578999999987643221 2245567889999999999999999999999999999999999999
Q ss_pred chhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceee
Q 043316 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925 (1031)
Q Consensus 846 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 925 (1031)
|.+++..... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+..... .......
T Consensus 80 L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~ 154 (277)
T cd05577 80 LKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-GKKIKGR 154 (277)
T ss_pred HHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc-CCccccc
Confidence 9999976542 3578999999999999999999999 999999999999999999999999999986543 2223345
Q ss_pred ccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHH
Q 043316 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005 (1031)
Q Consensus 926 ~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1005 (1031)
.++..|+|||++.+..++.++||||+|+++|+|++|+.||....... .......... ......+. .....+.
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~------~~~~~~~ 226 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRRTL-EMAVEYPD------KFSPEAK 226 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhccc-cccccCCc------cCCHHHH
Confidence 67889999999988889999999999999999999999986543311 0111111110 11111111 1133677
Q ss_pred HHHHhhccCCCCCCC-----CHHHHHH
Q 043316 1006 EVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 1006 ~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
+++.+||+.||.+|| ++.++++
T Consensus 227 ~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 227 DLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHccCChhHccCCCcccHHHHHh
Confidence 899999999999999 6666754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=325.90 Aligned_cols=266 Identities=18% Similarity=0.252 Sum_probs=188.2
Q ss_pred HHHhccCccceeecCCCccEEEEEeC--CCcEEEEEE--------------ccchhhhhhhhcHHHHHHHHHHHhcCCCC
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAELP--SGIIFAVKK--------------FNSQLLFDEMADQDEFLNEVLALTEIRHR 819 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~--------------~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ 819 (1031)
...++|++.+.||+|+||+||+|... ++..++.|. +.+. ..........+.+|+.++++++||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKR-VKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHH-hhcchHHHHHHHHHHHHHHhCCCC
Confidence 34578999999999999999998542 222222221 1111 011122355688999999999999
Q ss_pred ceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCc--cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCee
Q 043316 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAA--AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897 (1031)
Q Consensus 820 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 897 (1031)
||+++++++.+.+..|+|+|++. +++.+++..... .......++..++.|++.||+|||++ |||||||||+||+
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence 99999999999999999999985 467666643321 12234567889999999999999999 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCC-CCCcCcc-chh
Q 043316 898 LDSEHEAHVSDFGIAKFLNPHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP-RDYVSTN-FSS 974 (1031)
Q Consensus 898 l~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P-~~~~~~~-~~~ 974 (1031)
++.++.+||+|||+++.+..... ......||..|+|||++.+..++.++||||+||++|||++|+.+ +...... ...
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 99999999999999987654322 22346789999999999998999999999999999999998754 4322211 111
Q ss_pred hhhhHHHhhhhcCCCCCCCC-------------------hhHHH---HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 975 FSNMITEINQNLDHRLPTPS-------------------RDVMD---KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~---~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+...+..+ ......++... ..... ....+.+++.+|++.||++|||+.|+++
T Consensus 380 ~~~~~~~~-~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 380 LLKIIDSL-SVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHhc-ccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 11111110 00001111000 00000 0124567789999999999999999986
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=308.25 Aligned_cols=262 Identities=19% Similarity=0.256 Sum_probs=196.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCe---
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQH--- 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~--- 833 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|++..... .......+.+|+.++++++ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 78 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD--EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK 78 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc--ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence 3688899999999999999965 4789999999865432 1223467889999999995 6999999999987665
Q ss_pred --eEEEEEeccCCCchhhcccCCc--cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEec
Q 043316 834 --SFIVSEYLDRGSLTTILKDDAA--AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVSD 908 (1031)
Q Consensus 834 --~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~D 908 (1031)
.|+||||+++ ++.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEee
Confidence 8999999985 78888764322 24578999999999999999999999 9999999999999998 88999999
Q ss_pred cccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 987 (1031)
||.+..+...........+++.|+|||.+.+ ..++.++||||+|+++|+|++|..||....... ..............
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 233 (295)
T cd07837 155 LGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPTE 233 (295)
T ss_pred cccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCCh
Confidence 9999876443333344567889999998765 457899999999999999999999986543211 11111110000000
Q ss_pred C------------CCCCCC-hh----HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 H------------RLPTPS-RD----VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ~------------~~~~~~-~~----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ..+... .. ......++.++|.+||++||++||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 000000 00 0112345788999999999999999999975
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=296.67 Aligned_cols=249 Identities=29% Similarity=0.422 Sum_probs=203.6
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|+..+.||+|++|.||+|... +++.+++|++..... ...+.+.+|++++++++||+++++++++..+...++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 4778889999999999999664 789999999876432 34678899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+......
T Consensus 77 e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 77 EFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred ecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 9999999999987653 3588999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
.. .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ..........+..... .
T Consensus 152 ~~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~----~ 221 (253)
T cd05122 152 KA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK-----ALFKIATNGPPGLRNP----E 221 (253)
T ss_pred cc-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH-----HHHHHHhcCCCCcCcc----c
Confidence 32 345668899999999988889999999999999999999999976443211 1111111111111111 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+|++.||++|||+.|+++
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11346788999999999999999999975
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=305.60 Aligned_cols=256 Identities=26% Similarity=0.330 Sum_probs=194.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~l 836 (1031)
++|+..+.||+|+||.||++.. .+++.||+|++...... .....+.+|+.++.++. ||||+++++++..++..++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE---KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh---HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3456677899999999999954 56899999998754321 34567889999999996 9999999999999999999
Q ss_pred EEEeccCCCchhhcccC--CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDD--AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+|||+.. ++.++.... .....+++..+..++.|++.|++|||+.+ +++||||||+||+++.++.++|+|||++..
T Consensus 81 ~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 157 (288)
T cd06616 81 CMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQ 157 (288)
T ss_pred EEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHH
Confidence 9999864 555543211 11245888999999999999999999742 899999999999999999999999999976
Q ss_pred cCCCCCCceeeccccCcccccccccc---CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMM---RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
..... ......++..|+|||++.+. .++.++||||+||++|||++|+.||..... .............+...
T Consensus 158 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~ 232 (288)
T cd06616 158 LVDSI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVVKGDPPILS 232 (288)
T ss_pred hccCC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhhcCCCCCcCC
Confidence 54322 22334678899999998775 688999999999999999999999864431 11111111111111211
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ...+...++.+++.+||+.||++|||++||++
T Consensus 233 ~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 233 NS--EEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred Cc--CCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 11123346889999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=304.72 Aligned_cols=248 Identities=27% Similarity=0.380 Sum_probs=195.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
..|...+.||+|+||+||+|.. .+++.||+|++..... ......+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc-CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 4578888999999999999965 4689999999864321 1223356788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||++ |++.+++.... ..+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 94 MEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 99997 57767665432 3578999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
. ....++..|+|||++. .+.++.++||||||+++|||+||+.||....... ..........+...
T Consensus 168 ~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~--- 235 (307)
T cd06607 168 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNDSPTLS--- 235 (307)
T ss_pred C----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH-----HHHHHhcCCCCCCC---
Confidence 2 2346788999999874 3567889999999999999999999975433211 01111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++.+||+.||++||++.+++.
T Consensus 236 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 236 --SNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred --chhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1123346788999999999999999999986
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=307.95 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=207.0
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
+..|.+...||+|.|+.|..|. ..++..||+|.+.+... +....+.+.+|+++|+.++|||||+++.+.+....+|+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l--n~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL--NPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc--ChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 3568889999999999999994 45799999999987653 34455669999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+.+|.+++|+..+.. ..+..+..++.|+.+|++|||++ +|||||||++||+++.+.++||+|||++..+.
T Consensus 133 V~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence 9999999999999988754 44588999999999999999999 99999999999999999999999999999986
Q ss_pred CCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.........|++.|.|||+..+..| ++++|+||+|+++|.|+.|..||++..-. .....+......++-.+
T Consensus 207 -~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk--~Lr~rvl~gk~rIp~~m----- 278 (596)
T KOG0586|consen 207 -YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK--ELRPRVLRGKYRIPFYM----- 278 (596)
T ss_pred -ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc--cccchheeeeeccccee-----
Confidence 3445677899999999999998776 68999999999999999999998854331 11111111111111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+..+++++++..+|.+|++++++.+
T Consensus 279 -----s~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 279 -----SCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred -----echhHHHHHHhhccCccccCCHHHhhh
Confidence 124567788899999999999999875
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=296.23 Aligned_cols=249 Identities=27% Similarity=0.430 Sum_probs=203.8
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|++|.||+|.. .+++.||+|.+...... ....+.+.+|++++++++|||++++++++.+++..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEE
Confidence 477889999999999999955 46889999999765432 235678999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++... ..+++..+..++.|++.|++|||+. ||+||||+|+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 79 EYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred ecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 999999999998765 3588999999999999999999999 9999999999999999999999999999977654
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHH
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1031)
........++..|+|||...+..++.++||||+|+++|+|++|+.||...... ..... .........+. .
T Consensus 153 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~~~-~~~~~~~~~~~---~-- 222 (254)
T cd06627 153 SKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AALFR-IVQDDHPPLPE---G-- 222 (254)
T ss_pred cccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHHHH-HhccCCCCCCC---C--
Confidence 44334566889999999988878899999999999999999999997644321 11111 11111111111 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 999 DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 999 ~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+|++.+|++|||+.|++.
T Consensus 223 -~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 223 -ISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -CCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1236778899999999999999999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=305.14 Aligned_cols=243 Identities=26% Similarity=0.391 Sum_probs=195.8
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccC
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDR 843 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 843 (1031)
.+||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 4699999999999955 578999999875432 23456789999999999999999999999999999999999999
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCce
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 923 (1031)
++|.+++... .+++..+..++.|++.|++|||+. |++||||+|+||+++.++.++|+|||++...........
T Consensus 102 ~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 102 GALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 9999987543 478899999999999999999999 999999999999999999999999999876543333334
Q ss_pred eeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHH
Q 043316 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003 (1031)
Q Consensus 924 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1031)
...++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ..........+...... ......
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~----~~~~~~ 245 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----KAMKMIRDNLPPKLKNL----HKVSPS 245 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhhCCcccCCc----ccCCHH
Confidence 456789999999998888899999999999999999999997643221 11111112222222111 111235
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHH
Q 043316 1004 IMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1004 l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+.+++.+||+.||.+||++.|+++
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhc
Confidence 678899999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=259.95 Aligned_cols=258 Identities=18% Similarity=0.286 Sum_probs=199.4
Q ss_pred ccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|...++||+|.||+||+|+ ..+++.||+|+++-+. ++........+||.+++.++|.|||+++++...+..+.+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldd--ddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccC--CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 45667789999999999995 4578999999987654 23334567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
|||+. +|..|...-. +.++.+.+++++.|+++|+.|+|++ ++.|||+||+|.+++.+|+.|++|||+++.++-+
T Consensus 81 e~cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred HHhhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 99965 8888876543 4688899999999999999999999 9999999999999999999999999999998877
Q ss_pred CCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHh---hhhcC------
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEI---NQNLD------ 987 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~---~~~~~------ 987 (1031)
...+...+.|.+|++|.++.|.+ |+...|+||.|||+.|+.. |++-|...+-. ....+..... .+...
T Consensus 155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd-dqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD-DQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH-HHHHHHHHHhCCCccccCCccccC
Confidence 66777788899999999998854 7899999999999999998 44445543321 1111111100 00001
Q ss_pred ------CCCCCCChhHHHHHH----HHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 ------HRLPTPSRDVMDKLM----SIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ------~~~~~~~~~~~~~~~----~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+.++. ...+.+... .=.+++.+.+.-+|.+|.++++.++
T Consensus 234 pdyk~yp~ypa-ttswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPA-TTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccc-cchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 11111 111122222 2356777788889999999998875
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=298.01 Aligned_cols=244 Identities=27% Similarity=0.337 Sum_probs=196.2
Q ss_pred eecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCC
Q 043316 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 845 (1031)
||.|++|.||+|... +++.||+|++.+..... ....+.+.+|+.++++++||||+++++++.++...++|+||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE-TGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh-hhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 689999999999654 58999999987644221 2345678999999999999999999999999999999999999999
Q ss_pred chhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceee
Q 043316 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925 (1031)
Q Consensus 846 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 925 (1031)
|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+....... .....
T Consensus 80 L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~ 152 (262)
T cd05572 80 LWTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTF 152 (262)
T ss_pred HHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccc
Confidence 999997653 378899999999999999999998 99999999999999999999999999998764332 22335
Q ss_pred ccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh-hcCCCCCCCChhHHHHHHHH
Q 043316 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ-NLDHRLPTPSRDVMDKLMSI 1004 (1031)
Q Consensus 926 ~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 1004 (1031)
.++..|+|||.+.+..++.++|+||+|+++|+|++|+.||.......... ...... ......+.. . ...+
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~---~~~~ 223 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEI---YNDILKGNGKLEFPNY---I---DKAA 223 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHH---HHHHhccCCCCCCCcc---c---CHHH
Confidence 67889999999988889999999999999999999999986554211111 111110 111111111 1 3467
Q ss_pred HHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 1005 MEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 1005 ~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
.+++.+||+.+|++||+ ++|+++
T Consensus 224 ~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 224 KDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 88999999999999999 788765
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=311.35 Aligned_cols=258 Identities=22% Similarity=0.330 Sum_probs=195.9
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA---- 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~---- 831 (1031)
..++|+..+.||+|+||.||+|.. .+++.||+|++..... +....+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ--NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc--ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence 347899999999999999999954 5799999999865321 223456678899999999999999999998643
Q ss_pred --CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 832 --QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 832 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
...|+||||++ ++|.+.+... ++..++..++.|++.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 35799999996 4787777532 67888999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH--------
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE-------- 981 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~-------- 981 (1031)
|++....... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||...... ..+......
T Consensus 163 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 163 GLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQLGTPSDEF 240 (353)
T ss_pred ccceeCCCCC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCCHHH
Confidence 9998764322 223456788999999999989999999999999999999999998644321 111100000
Q ss_pred -------hhhhcCCCC----------------CCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 -------INQNLDHRL----------------PTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 -------~~~~~~~~~----------------~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... +..... .......+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000000000 000000 0012335678999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=308.91 Aligned_cols=263 Identities=19% Similarity=0.287 Sum_probs=195.8
Q ss_pred ccCccceeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--Cee
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHS 834 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~ 834 (1031)
+|.+.++||+|++|.||+|... +++.||+|.+..... ......+.+.+|+.++++++||||+++++++.+. ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE-QYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc-cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceE
Confidence 4778889999999999999654 579999999876431 1122346678899999999999999999999888 889
Q ss_pred EEEEEeccCCCchhhcccCCc--cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC----CCceEEec
Q 043316 835 FIVSEYLDRGSLTTILKDDAA--AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS----EHEAHVSD 908 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~D 908 (1031)
++||||+++ ++.+++..... ...+++..++.++.|++.|++|||+. +|+||||||+||+++. ++.+||+|
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~D 155 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGD 155 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECC
Confidence 999999975 67666653321 23578899999999999999999999 9999999999999999 89999999
Q ss_pred cccccccCCCCC---CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchh----hhhhHH
Q 043316 909 FGIAKFLNPHSS---NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS----FSNMIT 980 (1031)
Q Consensus 909 fg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~----~~~~~~ 980 (1031)
||++........ ......++..|+|||++.+. .++.++||||+||++|||++|+.||......... ......
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 999987643322 12334678899999987764 5789999999999999999999998754432100 000000
Q ss_pred HhhhhcC----------------------CCCCCCC-hhHH-------HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 EINQNLD----------------------HRLPTPS-RDVM-------DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 ~~~~~~~----------------------~~~~~~~-~~~~-------~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+...+. ....... .... .....+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 0000000 0000 11235789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=302.32 Aligned_cols=260 Identities=21% Similarity=0.210 Sum_probs=183.9
Q ss_pred hccCccceeecCCCccEEEEEeCC----CcEEEEEEccchhhh--hhh-----hcHHHHHHHHHHHhcCCCCceeeeeee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLF--DEM-----ADQDEFLNEVLALTEIRHRNIIKFHGF 827 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~--~~~-----~~~~~~~~Ei~~l~~l~h~niv~l~~~ 827 (1031)
.+|.+.+.||+|+||.||+|...+ +..+|+|+....... .+. ........+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578999999999999999996543 456666654322110 000 001122344455667789999999998
Q ss_pred EecCC----eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc
Q 043316 828 CSNAQ----HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 828 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
+.... ..++++|+.. .++.+.++... ..++..+..++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCc
Confidence 75543 3467788764 35656555432 246778899999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhh
Q 043316 904 AHVSDFGIAKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~ 976 (1031)
++|+|||+|+.+..... ......||+.|+|||+..+..++.++||||+||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999987643221 11234689999999999999999999999999999999999999976533221111
Q ss_pred hhHHHhhhh-cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 977 NMITEINQN-LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 977 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
......... ........ .....+.+++..|++.+|++||+++++++.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKCDFIKRLHEGKIKIK-----NANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHHHHHHHhhhhhhccC-----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111111111 11111110 11245778899999999999999999998764
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=306.99 Aligned_cols=261 Identities=23% Similarity=0.305 Sum_probs=196.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--Cee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~ 834 (1031)
.++|++.+.||+|+||.||+|.. .+++.||+|+++..... ......+.+|+.++++++|+||+++++++.+. +..
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER--DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC--CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 46799999999999999999965 56999999998654321 11233567899999999999999999998765 568
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++ +|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred EEEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeee
Confidence 999999974 7888876542 4588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh--------
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN-------- 985 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~-------- 985 (1031)
............++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .............
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 158 YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-EQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred cCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCChhhchhh
Confidence 6544333344456788999999865 45789999999999999999999998644331 1111111100000
Q ss_pred ------cCCCCCCCC-hhH----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 ------LDHRLPTPS-RDV----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ------~~~~~~~~~-~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+... ... ......+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000 000 011345678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=311.44 Aligned_cols=202 Identities=28% Similarity=0.446 Sum_probs=177.6
Q ss_pred cCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC------e
Q 043316 761 FGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ------H 833 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~------~ 833 (1031)
+...+.||+|+||.||+|+ .++|+.||||.++... .....+...+|++++++++|||||+++++-++.. .
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~---~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES---SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc---ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 3445679999999999997 5689999999997754 3456788899999999999999999999876544 5
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC--CCCc--eEEecc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD--SEHE--AHVSDF 909 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~--~kl~Df 909 (1031)
..+|||||.+|||...+++......+++.+++.++.+++.||.|||++ |||||||||.||++- ++|+ .||+||
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecc
Confidence 689999999999999999887777899999999999999999999999 999999999999984 3343 799999
Q ss_pred ccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
|.|+..+++ ...+..+||..|.+||++.. +.|+..+|.|||||++|+..||..||....
T Consensus 169 G~Arel~d~-s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 169 GAARELDDN-SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred cccccCCCC-CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 999988654 46788999999999999984 788999999999999999999999986443
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=295.08 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=204.5
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--CeeEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHSFI 836 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~~l 836 (1031)
+|...+.||+|++|.||+|... +++.|++|++...... ....+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEE
Confidence 4677889999999999999664 7999999998665421 23567889999999999999999999999988 88999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|+||+++++|.+++.... .+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+....
T Consensus 79 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred EEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 999999999999997654 688999999999999999999998 99999999999999999999999999998775
Q ss_pred CCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 917 PHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 917 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... ......++..|+|||...+...+.++||||+|+++|+|++|+.||....... ........ ....+..+
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~--~~~~~~~~ 226 (260)
T cd06606 153 DIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM----AALYKIGS--SGEPPEIP 226 (260)
T ss_pred cccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH----HHHHhccc--cCCCcCCC
Confidence 4432 1344668899999999988889999999999999999999999987554211 11111110 01111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ....+.+++.+|++.||++||++.|+++
T Consensus 227 ~~---~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 227 EH---LSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cc---cCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11 1346788899999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=298.75 Aligned_cols=246 Identities=21% Similarity=0.243 Sum_probs=187.9
Q ss_pred ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHH-HhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 765 YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLA-LTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+.||+|+||.||+|.. .+++.||||++.+...... .....+..|..+ ....+|||++++++++..++..++|+||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAK-NQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHH-HHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence 4689999999999955 5689999999875432111 123344455444 445589999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
+++|.++++... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+..... .
T Consensus 81 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~ 150 (260)
T cd05611 81 GGDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----N 150 (260)
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----c
Confidence 999999997643 478899999999999999999999 999999999999999999999999999875432 2
Q ss_pred eeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHH
Q 043316 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002 (1031)
Q Consensus 923 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1031)
....++..|+|||.+.+..++.++||||+|+++|||++|..||...... .. ........ ...+.. .......
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~---~~~~~~~~-~~~~~~--~~~~~~~ 222 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--AV---FDNILSRR-INWPEE--VKEFCSP 222 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--HH---HHHHHhcc-cCCCCc--ccccCCH
Confidence 3345788999999998888899999999999999999999998643321 11 11111110 011110 0011234
Q ss_pred HHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 1003 SIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 1003 ~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
.+.+++.+||+.||++||++.++.+.+
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 678899999999999999776555443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=297.62 Aligned_cols=250 Identities=25% Similarity=0.341 Sum_probs=203.5
Q ss_pred ccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|++.+.||+|++|.||+|. ..+++.+|+|++...... ......+.+|++++++++||||+++++++.+....++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS--QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc--HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEe
Confidence 47788999999999999995 457899999998764422 234667889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++.... ....+++..++.++.|++.|++|||+. |++||||+|+||+++.++.+|++|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 9999999999986632 124578899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. ......++..|+|||.+.+..++.++|+||+|+++|||++|+.||+..... .. ...... ...+....
T Consensus 156 ~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~---~~~~~~---~~~~~~~~-- 223 (256)
T cd08530 156 N--MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DL---RYKVQR---GKYPPIPP-- 223 (256)
T ss_pred C--CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HH---HHHHhc---CCCCCCch--
Confidence 3 223355788999999999888999999999999999999999998654321 11 111111 11111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++.+++.+|++.+|++||++.|+++
T Consensus 224 -~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 224 -IYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -hhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 23346889999999999999999999975
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=304.23 Aligned_cols=261 Identities=20% Similarity=0.267 Sum_probs=196.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|++|+||+|.. .+++.||+|++..... .....+.+.+|++++++++||||+++++++.++...++|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc--cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 4688999999999999999965 4789999999865432 112346788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEeccccccccC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~ 916 (1031)
|||++ +++.+++..... ...++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+||+|||++....
T Consensus 80 ~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred Eeccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 99996 578777765432 2357788899999999999999999 9999999999999985 5579999999998654
Q ss_pred CCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC--------
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD-------- 987 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~-------- 987 (1031)
..........+++.|+|||.+.+. .++.++||||+||++|+|+||+.||...... ...............
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 155 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred CCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhcccccc
Confidence 433333445678899999988664 5788999999999999999999998654321 111111100000000
Q ss_pred --------CCCCCCCh--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 --------HRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 --------~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+....... .......++.+++.+|++.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 234 LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000 00011235778999999999999999999985
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=300.05 Aligned_cols=244 Identities=20% Similarity=0.264 Sum_probs=187.1
Q ss_pred eeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHH---hcCCCCceeeeeeeEecCCeeEEEEEec
Q 043316 766 CIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL---TEIRHRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l---~~l~h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
.||+|+||.||+|.. .+++.+|+|.+........ .....+.+|..++ ...+||+|+.+++++..++..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccc-hHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence 389999999999965 5689999999865432211 1223344444433 3447999999999999999999999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 921 (1031)
++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||++.......
T Consensus 80 ~~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 80 NGGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999999987543 489999999999999999999999 99999999999999999999999999997654322
Q ss_pred ceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHH
Q 043316 922 WTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000 (1031)
Q Consensus 922 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1031)
.....|+..|+|||...+ ..++.++||||+||++|||++|..||.......... ............+. ..
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~------~~ 222 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE---IDRMTLTVNVELPD------SF 222 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH---HHHHhhcCCcCCcc------cc
Confidence 233468999999998864 557899999999999999999999986543321111 11111111112211 12
Q ss_pred HHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 1001 LMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 1001 ~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
...+.+++.+|++.||++|| +++|+++
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 23677889999999999999 6999876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=302.32 Aligned_cols=257 Identities=23% Similarity=0.317 Sum_probs=200.4
Q ss_pred ccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
+|++.+.||+|++|.||+|+. .+++.||||++++..........+.+.+|++++.++ +||+|+++++++..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 377888999999999999953 357899999987654333344566788999999999 599999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999999998754 2478889999999999999999998 999999999999999999999999999886
Q ss_pred cCCCCCC-ceeeccccCccccccccccC--CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 915 LNPHSSN-WTAFAGTFGYAAPEIAHMMR--ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 915 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
....... .....++..|+|||...+.. .+.++||||+|+++|||++|+.||...... ............. ....+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~ 232 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEISRRILKS-KPPFP 232 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHHHHHHcc-CCCCC
Confidence 5433221 22345789999999987655 788999999999999999999998543221 1111111111111 11111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. . ....+.+++.+||+.||++|||++++.+.|+
T Consensus 233 ~---~---~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 233 K---T---MSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred c---c---cCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 1 1 1235678899999999999999888876654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=294.71 Aligned_cols=252 Identities=27% Similarity=0.396 Sum_probs=205.1
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|.+.+.||.|++|.||+|.. .+++.||+|++..... .....+.+.+|++++++++|||++++++.+..++..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM--SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC--ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEE
Confidence 477888999999999999965 4689999999876432 2245667889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++.... ....+++.++..++.+++.|++|||+. |++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 9999999999997642 124689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........+++.|+|||...+..++.++||||+|+++|+|++|+.||+.... ...............+.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~----- 225 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKILKGQYPPIPS----- 225 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHhcCCCCCCCC-----
Confidence 43333445688899999999888899999999999999999999999764432 11111111111111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||..+|++|||+.|+++
T Consensus 226 -~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 226 -QYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 12236778899999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=296.15 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=197.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhh-hhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--Cee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLL-FDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~ 834 (1031)
.+|.+.+.||+|+||.||+|.. .+++.||+|++..... .........+.+|++++++++||||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 3688899999999999999954 5699999998753211 11223456889999999999999999999998664 568
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999987543 367889999999999999999999 999999999999999999999999999986
Q ss_pred cCCC---CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 915 LNPH---SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 915 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
.... ........++..|+|||.+.+..++.++||||+||++|||++|+.||...... ............+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~p 231 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----AAIFKIATQPTKPMLP 231 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----HHHHHHHcCCCCCCCC
Confidence 5321 11223456789999999998888999999999999999999999998644321 1111111111111112
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. .....+.+++.+|++ +|.+||++.++++
T Consensus 232 ~------~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 232 D------GVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred c------ccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1 122357788999999 5799999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=294.85 Aligned_cols=249 Identities=20% Similarity=0.327 Sum_probs=192.4
Q ss_pred HHHHHHHhccCcccee--ecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeee
Q 043316 752 EEIIKAIDDFGEKYCI--GKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGF 827 (1031)
Q Consensus 752 ~~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~ 827 (1031)
.+.....++|++.+.+ |+|+||.||++.. .+++.+|+|.+....... . |+.....+ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~-----e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----I-----EPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----h-----hHHHHHHhhcCCCEEEEEEE
Confidence 3444556677777776 9999999999954 578999999986543211 1 22222212 69999999999
Q ss_pred EecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEE
Q 043316 828 CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHV 906 (1031)
Q Consensus 828 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl 906 (1031)
+..++..++||||+++++|.++++... .+++.++..++.|+++|++|||+. +++||||||+||+++.++ .++|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEE
Confidence 999999999999999999999997653 588999999999999999999999 999999999999999988 9999
Q ss_pred eccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
+|||.+...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||................ .
T Consensus 152 ~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~ 223 (267)
T PHA03390 152 CDYGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR----Q 223 (267)
T ss_pred ecCccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh----h
Confidence 999999865432 23467899999999998889999999999999999999999987443322111111111 1
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCC-HHHHHH
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT-MKKVCN 1027 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~ 1027 (1031)
....... ......+.+++.+||+.||.+||+ ++|+++
T Consensus 224 ~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 QKKLPFI----KNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cccCCcc----cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 1111111 123346788999999999999996 588874
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=309.21 Aligned_cols=260 Identities=20% Similarity=0.258 Sum_probs=197.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----Q 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~ 832 (1031)
.+|.+.+.||+|+||+||+|.. .+++.||||++..... .......+.+|+.+++.++||||+++++++... .
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD--NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 5688999999999999999954 5789999999865421 223455678899999999999999999988654 3
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++|+||+. ++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 5799999996 6888888754 3588899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH------------
Q 043316 913 KFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI------------ 979 (1031)
Q Consensus 913 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~------------ 979 (1031)
..............++..|+|||.+.+ ..++.++||||+||++|+|++|+.||....... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-QLKLITELLGSPSEEDLG 234 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCChHHhh
Confidence 876543333344567889999998765 468899999999999999999999986543210 000000
Q ss_pred -------HHhhhhcCCCCCC-CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 980 -------TEINQNLDHRLPT-PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 980 -------~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
............. ......+...++.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000000000000 000011223467899999999999999999999863
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=300.06 Aligned_cols=258 Identities=22% Similarity=0.304 Sum_probs=200.1
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|++.+.||+|++|.||+|.. .+++.+|+|++...... ......+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES--EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc--chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence 56678899999999999965 47899999998765422 2345678899999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++ ++.+++.... ..+++.+++.++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 79 FMDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred ccCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 9975 8888876643 3588999999999999999999999 99999999999999999999999999998775543
Q ss_pred CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh--------------
Q 043316 920 SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ-------------- 984 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~-------------- 984 (1031)
.......++..|+|||.+.+. .++.++||||+|+++|+|+||+.||...... ............
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-DQLFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCchHhcccchhhhh
Confidence 233345678899999998776 7899999999999999999999998644321 111111110000
Q ss_pred ----hcCCCCCCC-ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 ----NLDHRLPTP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ----~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... .........++.+++.+||++||.+||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000000 0011122457889999999999999999999985
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=299.35 Aligned_cols=254 Identities=22% Similarity=0.326 Sum_probs=197.5
Q ss_pred ccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
+|++.+.||+|+||.||.|+. .+|+.||+|+++...........+.+.+|+.+++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 377888999999999999965 378999999987654333334456788999999999 599999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++|+||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999997643 477889999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-CceeeccccCcccccccccc--CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 915 LNPHSS-NWTAFAGTFGYAAPEIAHMM--RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 915 ~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
...... ......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... ............. .+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~ 232 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEISRRILKS-EPPYP 232 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHHHHhhcc-CCCCC
Confidence 543221 22345688999999998753 4678999999999999999999998643221 1111111111111 11111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
. .....+.+++.+|++.||++|| ++.+++.
T Consensus 233 ~------~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 233 Q------EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred c------cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 1 1123567889999999999997 6677654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=298.70 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=197.1
Q ss_pred cCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--CeeEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHSFIV 837 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~~lv 837 (1031)
|++.+.||+|++|.||+|... +++.+|+|++.... ......+.+.+|++++++++|||++++++++.+. +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 567789999999999999654 58999999997653 1223456788999999999999999999999888 899999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+||+++ +|.+++.... ..+++..++.++.|++.|++|||+. +++|+||+|+||++++++.++|+|||.+.....
T Consensus 79 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 79 FEYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred eccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 999975 8888886542 3588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh----------
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN---------- 985 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~---------- 985 (1031)
... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||+..... .............
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchhhcccccc
Confidence 321 1233456788999997765 45789999999999999999999998644321 1111111100000
Q ss_pred ------cCCCC--CCCChhHHHH--HHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 ------LDHRL--PTPSRDVMDK--LMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ------~~~~~--~~~~~~~~~~--~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..... +......... ...+.+++.+||+.+|.+||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000 0000001111 346789999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=306.61 Aligned_cols=259 Identities=21% Similarity=0.314 Sum_probs=194.0
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA----- 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 831 (1031)
.++|++.+.||+|+||.||+|. ..+++.||+|++.... .......+.+|+.++++++||||+++++++...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE---HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 3679999999999999999995 4578999999986422 223456788999999999999999999987544
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++|+||+++ ++.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 81 NDVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred ceEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 357999999974 777777543 488899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH-------
Q 043316 912 AKFLNPHSS---NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT------- 980 (1031)
Q Consensus 912 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~------- 980 (1031)
+........ ......++..|+|||.+.+ ..++.++||||+||++|+|++|+.||...... ..+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~-~~~~~~~~~~~~~~~ 231 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL-HQLNLILGVLGTPSQ 231 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCCH
Confidence 986543221 1233567899999998654 46889999999999999999999998643321 00000000
Q ss_pred -Hh-----------hhhcCCCCCCCCh-hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 981 -EI-----------NQNLDHRLPTPSR-DVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 981 -~~-----------~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.. ....+........ .......++.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0000000000000 001123467899999999999999999999863
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=297.59 Aligned_cols=255 Identities=20% Similarity=0.260 Sum_probs=191.6
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecC--CeeEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNA--QHSFI 836 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~--~~~~l 836 (1031)
|++.+.||+|+||.||+|.. .+++.||+|+++.... + .......+|+.++.++. |||++++++++.++ +..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~--~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK--S-LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC--C-chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence 56778899999999999954 5789999999865421 1 12334567888898885 99999999999887 88999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|+||++ +++.+++.... ..+++.+++.++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.+....
T Consensus 78 v~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 78 VFELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred EEecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 999997 57877776532 3588999999999999999999999 9999999999999999 999999999998764
Q ss_pred CCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH-------Hhhhhc--
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT-------EINQNL-- 986 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~-------~~~~~~-- 986 (1031)
.... .....++..|+|||.+.+ +.++.++||||+||++|||++|+.||....... ....... ......
T Consensus 151 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 151 SKPP-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-QIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred cCCC-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-HHHHHHHHcCCCCHHHHHhhcc
Confidence 3322 233557889999997654 457889999999999999999999986543211 0000000 000000
Q ss_pred ----CCCCCCCCh-----hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 ----DHRLPTPSR-----DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ----~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.... ........+.+++.+||+++|++||+++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000 00122357889999999999999999999986
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-32 Score=301.86 Aligned_cols=254 Identities=25% Similarity=0.355 Sum_probs=193.9
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~ 835 (1031)
.++|++.+.||+|++|.||+|... +++.||||+++.... ......+.+|+.++.+.. ||||+++++++.++...+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN---KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC---hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 356888999999999999999765 489999999875432 123456677887776665 999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+. +++.++..... ..+++..+..++.|++.|++|||+.+ +|+||||+|+||+++.++.+||+|||++..+
T Consensus 91 ~v~e~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 91 ICMELMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred EEeeccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 9999985 47777665432 36888999999999999999999731 8999999999999999999999999999866
Q ss_pred CCCCCCceeeccccCccccccccccC----CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMR----ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
.... ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||.......... ........+..+
T Consensus 166 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 240 (296)
T cd06618 166 VDSK-AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVL----TKILQEEPPSLP 240 (296)
T ss_pred cCCC-cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHH----HHHhcCCCCCCC
Confidence 4322 223345788999999987653 7889999999999999999999986432221111 111111111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
... ....++.+++.+||+.||++||++.++++.
T Consensus 241 ~~~----~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 241 PNE----GFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCC----CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 123367889999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-32 Score=301.32 Aligned_cols=261 Identities=21% Similarity=0.321 Sum_probs=194.1
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC---
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--- 832 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--- 832 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .......+.+|++++++++||||+++++++...+
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKATPY 87 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC--cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccc
Confidence 346799999999999999999955 4799999999865321 1122345678999999999999999999986654
Q ss_pred -----eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEe
Q 043316 833 -----HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVS 907 (1031)
Q Consensus 833 -----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 907 (1031)
..++||||+.+ ++.+++.... ..+++.+++.++.|++.|++|||++ +++|+||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 161 (310)
T cd07865 88 NRYKGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLA 161 (310)
T ss_pred cCCCceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEEC
Confidence 45999999964 7877776542 3578999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCC----CceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh
Q 043316 908 DFGIAKFLNPHSS----NWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 908 Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
|||.+........ ......++..|+|||.+.+.. ++.++||||+|+++|||++|+.||...... .....+..+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~~~~~ 239 (310)
T cd07865 162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTLISQL 239 (310)
T ss_pred cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHH
Confidence 9999986643221 122345688999999876643 688999999999999999999998644321 111111111
Q ss_pred hhhcCCC---------------CCCCChhHHH-------HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 NQNLDHR---------------LPTPSRDVMD-------KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ~~~~~~~---------------~~~~~~~~~~-------~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++. .+........ ....+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 1100000 0000000000 1134678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.2e-32 Score=301.72 Aligned_cols=248 Identities=26% Similarity=0.371 Sum_probs=194.2
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.|...+.||+|+||.||+|.. .++..||+|++...... .......+.+|++++++++|||++++++++.++...++||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC-chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 367788899999999999965 47899999998654221 2234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++ ++.+.+.... ..+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 105 e~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 105 EYCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred eCCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 99974 7777775432 3578999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 919 SSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
....++..|+|||.+. ++.++.++||||+||++|||++|+.||...... ............... ..
T Consensus 179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~--~~ 247 (317)
T cd06635 179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHIAQNESPTLQ--SN 247 (317)
T ss_pred ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHHhccCCCCC--Cc
Confidence 2346788999999874 456889999999999999999999997543221 001111111111111 11
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
.....+.+++.+||+.+|.+||++.|+++.
T Consensus 248 ---~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 248 ---EWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred ---cccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 122357789999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.2e-32 Score=300.46 Aligned_cols=263 Identities=23% Similarity=0.322 Sum_probs=197.1
Q ss_pred HHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC--
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ-- 832 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~-- 832 (1031)
...++|++.+.||+|+||.||+|... +++.||+|+++.... .......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~ 81 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE--KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc--ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence 45678999999999999999999654 689999999865432 1223456788999999999999999999987654
Q ss_pred --------eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 833 --------HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 833 --------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
..++|+||+++ ++.+.+... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred hhccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcE
Confidence 78999999986 676666543 23588999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC-CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh
Q 043316 905 HVSDFGIAKFLNPHSS-NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
||+|||.+........ ......++..|+|||.+.+. .++.++||||+||++|||++|+.||..... ...........
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~ 234 (302)
T cd07864 156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLC 234 (302)
T ss_pred EeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHh
Confidence 9999999987644332 12233567889999987653 568899999999999999999999864332 11111111111
Q ss_pred hhhcCCCCCCC-------------------ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 NQNLDHRLPTP-------------------SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ~~~~~~~~~~~-------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........+.. ..........+.+++.+||+.||.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000000000 0000011246789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-32 Score=325.68 Aligned_cols=256 Identities=24% Similarity=0.391 Sum_probs=204.1
Q ss_pred ccCccceeecCCCccEEEEEeC--------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEec
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP--------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSN 830 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~ 830 (1031)
+..+.+.+|+|+||.||+|... ....||||.++.... ..+.+.+..|+++++.+. ||||+.++|+|..
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~---~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS---SSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccC---cHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 3455669999999999999532 145799999887653 246788999999999994 9999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCC-----------cc--ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCee
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDA-----------AA--KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~-----------~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 897 (1031)
++..++|+||+..|+|.++++... .. ..++..+.+.++.|||.|++||++. ++||||+.++||+
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVL 450 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEE
Confidence 999999999999999999998654 01 1388899999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCCc-eeec--cccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 898 LDSEHEAHVSDFGIAKFLNPHSSNW-TAFA--GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 898 l~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~--gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
++.+..+||+|||+|+......... .... -+..|||||.+....++.||||||||+++||++| |..||........
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 9999999999999999754433322 2222 3567999999999999999999999999999999 9999875332111
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..+.+........|... ..++.++++.||+.+|++||++.|+++.+++
T Consensus 531 ----l~~~l~~G~r~~~P~~c------~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 531 ----LLEFLKEGNRMEQPEHC------SDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred ----HHHHHhcCCCCCCCCCC------CHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 12222222222222221 2367788999999999999999999998863
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-32 Score=307.39 Aligned_cols=260 Identities=22% Similarity=0.289 Sum_probs=197.5
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----CCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----AQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~ 833 (1031)
++|++.+.||+|++|.||+|.. .+++.||+|++..... .....+.+.+|+.++++++||||+++++++.. ...
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD--VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc--cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 6789999999999999999954 5799999999875432 22345677889999999999999999998753 356
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++|+||+. ++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 899999996 68988886543 388999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCC----CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhh-------------
Q 043316 914 FLNPHSS----NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF------------- 975 (1031)
Q Consensus 914 ~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~------------- 975 (1031)
....... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 6543221 1234568899999998765 458899999999999999999999986543211000
Q ss_pred -----hhhHHHhhhhcCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 976 -----SNMITEINQNLDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 976 -----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...............+..... ......++.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000000001111111111000 0112356889999999999999999999886
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-32 Score=304.35 Aligned_cols=258 Identities=19% Similarity=0.252 Sum_probs=190.3
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
+++.+|.|+++.||++.. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..+++|||++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~ 82 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSC--SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA 82 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEecccc--chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccC
Confidence 334455555555555544 799999999876422 22356789999999999999999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC--
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS-- 920 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-- 920 (1031)
+++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|++|||.+........
T Consensus 83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~ 158 (314)
T cd08216 83 YGSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ 158 (314)
T ss_pred CCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccc
Confidence 9999999986432 3478889999999999999999999 999999999999999999999999999875532211
Q ss_pred -----CceeeccccCcccccccccc--CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh---------
Q 043316 921 -----NWTAFAGTFGYAAPEIAHMM--RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ--------- 984 (1031)
Q Consensus 921 -----~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~--------- 984 (1031)
......++..|+|||++.+. .++.++||||+||++|||++|+.||...................
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhh
Confidence 11234567789999998763 57889999999999999999999987543321111000000000
Q ss_pred ---hc--------CCC--CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 ---NL--------DHR--LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ---~~--------~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ... ..............+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00 000 00000001112246788999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.2e-33 Score=286.89 Aligned_cols=244 Identities=24% Similarity=0.327 Sum_probs=201.0
Q ss_pred HhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 835 (1031)
..+|....+||+|+||.|..| +..+.+.||||+++++.+.++ .+.+--+.|-++++.- +-|.++++..+|+.-+.+|
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQd-DDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQD-DDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeec-CcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 357899999999999999999 445678999999998776543 3455566777777766 5789999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
.||||+.||+|-.++++.+. +.+..+..+|..||-||-+||++ ||+.||||.+||++|.+|++||+|||+++.-
T Consensus 427 FVMEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred eEEEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccc
Confidence 99999999999999988764 56678999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
--+......+.||+.|+|||++...+|+..+|.|||||++|||+.|+.||+..+. .+..+.+.+....++..
T Consensus 501 i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE--~elF~aI~ehnvsyPKs------ 572 (683)
T KOG0696|consen 501 IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DELFQAIMEHNVSYPKS------ 572 (683)
T ss_pred ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHHccCcCccc------
Confidence 4445556788999999999999999999999999999999999999999886554 23333333222222222
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARP 1020 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rp 1020 (1031)
...+.+++++..+.+.|.+|.
T Consensus 573 ----lSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 573 ----LSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ----ccHHHHHHHHHHhhcCCcccc
Confidence 223556777888999999985
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=294.03 Aligned_cols=244 Identities=20% Similarity=0.234 Sum_probs=187.4
Q ss_pred eeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHH---HHHhcCCCCceeeeeeeEecCCeeEEEEEec
Q 043316 766 CIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEV---LALTEIRHRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
.||+|+||.||+|.. .+++.||+|.+.+...... .....+..|. ..++...||+|+++++++.+++..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccc-hhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence 389999999999955 5689999999876432211 1122233343 3344567999999999999999999999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 921 (1031)
++++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++...... .
T Consensus 80 ~g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~ 151 (278)
T cd05606 80 NGGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--K 151 (278)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--C
Confidence 999999988654 3589999999999999999999999 9999999999999999999999999999765432 2
Q ss_pred ceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHH
Q 043316 922 WTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000 (1031)
Q Consensus 922 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1031)
.....|+..|+|||.+.++ .++.++||||+||++|||++|+.||........... ...........+.. .
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~------~ 222 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI---DRMTLTMAVELPDS------F 222 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH---HHHhhccCCCCCCc------C
Confidence 2345689999999998754 588999999999999999999999875432211111 11111111122211 1
Q ss_pred HHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 1001 LMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 1001 ~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
...+.+++.+|+..+|.+|| ++.|+++
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 24678889999999999999 9999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.5e-33 Score=322.17 Aligned_cols=205 Identities=24% Similarity=0.308 Sum_probs=182.5
Q ss_pred HHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 754 IIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 754 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
+.-..++|.+.++||+|+||.|..++. .+++.||+|++++-...+ ..+...|..|-.+|..-+.+-|++++.+|+++.
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlK-r~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLK-RAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhh-chhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 333458899999999999999999965 578999999998754432 345778999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
++|+|||||+||+|..++.... ++++.-++.++..|+-||+-+|+. |+|||||||+|||+|..|++||+|||.+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhH
Confidence 9999999999999999998764 588899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC-ceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCC
Q 043316 913 KFLNPHSSN-WTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPR 965 (1031)
Q Consensus 913 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~ 965 (1031)
..+..++.. ....+|||.|.+||++.. +.|++..|.||+||++|||+.|..||
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPF 281 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPF 281 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcc
Confidence 988765543 456789999999999852 57899999999999999999999995
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-32 Score=305.21 Aligned_cols=261 Identities=23% Similarity=0.327 Sum_probs=196.1
Q ss_pred HHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC--C
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA--Q 832 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~--~ 832 (1031)
..++|++.+.||+|+||.||+|... +++.+|||++.... ........+.+|+.+++++ +||||+++++++... .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF--RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc--CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 3467889999999999999999654 68899999885432 1223455677899999999 999999999998653 4
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++||||++ ++|..++... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||.+
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~ 154 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLA 154 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccch
Confidence 6899999997 5898888653 477889999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-----CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH-----
Q 043316 913 KFLNPHSS-----NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE----- 981 (1031)
Q Consensus 913 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~----- 981 (1031)
........ ......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||....... ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~ 233 (337)
T cd07852 155 RSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEVIGPPS 233 (337)
T ss_pred hccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCC
Confidence 86643321 2234567899999998765 457889999999999999999999986443211 00000000
Q ss_pred --------------hhhhcCC-CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 982 --------------INQNLDH-RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 982 --------------~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
....... ..............++.+++.+||+.||++|||+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000 0000000001123467899999999999999999999863
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=294.70 Aligned_cols=258 Identities=22% Similarity=0.320 Sum_probs=195.0
Q ss_pred cCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC---CCCceeeeeeeEecCCe---
Q 043316 761 FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI---RHRNIIKFHGFCSNAQH--- 833 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~~~~~--- 833 (1031)
|++.+.||+|+||.||+|+.. +++.||+|+++.... +......+.+|+.+++++ +|||++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS--EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc--cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 567789999999999999765 589999999975432 112234566777776655 69999999999988776
Q ss_pred --eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 834 --SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 834 --~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
.+++|||+++ +|.+++..... ..+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||.
T Consensus 79 ~~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 79 LKLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred ceeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCc
Confidence 8999999974 88888865432 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh--------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN-------- 983 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~-------- 983 (1031)
+....... ......++..|+|||++.+..++.++||||+||++|||++|+.||+..... ...........
T Consensus 154 ~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 154 ARIYSFEM-ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred ceeccCCc-ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcC
Confidence 98764332 223345788999999999888999999999999999999999998654331 11111111100
Q ss_pred -------hhcCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 -------QNLDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 -------~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............. ..+....+.+++.+||+.||++||+++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0001111111111 1122346778999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-32 Score=298.00 Aligned_cols=250 Identities=25% Similarity=0.362 Sum_probs=201.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~l 836 (1031)
++|.+.+.||+|++|.||+|.. .+++.||+|++....... ....+.+.+|++++++++ ||||+++++++.+++..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK-EKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccc-hHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence 3688889999999999999955 479999999987643322 233567889999999998 9999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 80 v~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 80 VLEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999997653 589999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCC--------------------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhh
Q 043316 917 PHSS--------------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 917 ~~~~--------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~ 976 (1031)
.... ......++..|+|||...+..++.++||||+|++++++++|+.||......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----- 228 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY----- 228 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-----
Confidence 3221 122345788999999988888999999999999999999999998754421
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCH----HHHHH
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTM----KKVCN 1027 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~----~evl~ 1027 (1031)
....... .....++.. ....+.+++.+||+.+|.+||++ +|+++
T Consensus 229 ~~~~~~~-~~~~~~~~~------~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 229 LTFQKIL-KLEYSFPPN------FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHH-hcCCCCCCc------cCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 1111111 111111111 12357789999999999999999 77764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.7e-32 Score=295.11 Aligned_cols=246 Identities=24% Similarity=0.352 Sum_probs=195.3
Q ss_pred eecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCC
Q 043316 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 845 (1031)
||+|+||.||+|... +++.+|+|++...... .....+.+.+|++++++++||||+++++.+..+...++|+||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMI-RKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhh-hhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 589999999999665 5999999998765421 12446778999999999999999999999999999999999999999
Q ss_pred chhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC-----
Q 043316 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS----- 920 (1031)
Q Consensus 846 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~----- 920 (1031)
|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 80 L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 80 LASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 999997643 578899999999999999999999 999999999999999999999999999886533211
Q ss_pred ---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 921 ---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 921 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
......++..|+|||...+..++.++||||+|+++||+++|+.||...... .. ....... ....+..
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~---~~~~~~~-~~~~~~~---- 223 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--EI---FQNILNG-KIEWPED---- 223 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HH---HHHHhcC-CcCCCcc----
Confidence 223445788999999998888899999999999999999999998644321 11 1111110 1111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
......+.+++.+||+.+|++|||+.++.+.|
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 224 VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 01134678899999999999999995555544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.5e-32 Score=302.68 Aligned_cols=254 Identities=21% Similarity=0.303 Sum_probs=189.5
Q ss_pred eeecC--CCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 766 CIGKG--RQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 766 ~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
.||+| +||+||+|+. .+++.||+|++....... ...+.+.+|+.+++.++||||+++++++..++..++|+||+.
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE--EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 46666 9999999965 579999999987543222 235778899999999999999999999999999999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 922 (1031)
++++.++++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 83 YGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999999876532 3478899999999999999999999 99999999999999999999999998654332211110
Q ss_pred -------eeeccccCcccccccccc--CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH-------------
Q 043316 923 -------TAFAGTFGYAAPEIAHMM--RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT------------- 980 (1031)
Q Consensus 923 -------~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~------------- 980 (1031)
....++..|+|||++.+. .++.++||||+||++|||++|+.||...............
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 112345679999998764 4688999999999999999999998654321110000000
Q ss_pred ---H-------hh--------------hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 ---E-------IN--------------QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 ---~-------~~--------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. .. ......... .........+.+++++||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRT--PSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccc--hhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 00 000000000 011123346889999999999999999999975
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-34 Score=282.49 Aligned_cols=252 Identities=27% Similarity=0.345 Sum_probs=196.0
Q ss_pred cceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEEEec
Q 043316 764 KYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
...||.|+||+|++- ..+.|+..|||+++.... ..+++++..|.+...+- +.||||++||++..++..|+.||.|
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~---~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI---EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc---hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 446999999999998 556899999999987653 34678888998886555 6999999999999999999999999
Q ss_pred cCCCchhhcccC--CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 842 DRGSLTTILKDD--AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 842 ~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
+ .|+..+-+.. ....++++.-+-+|..-.++||+||-+.. .|||||+||+||+++..|.+||||||.+-.+.. .
T Consensus 146 d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~-S 221 (361)
T KOG1006|consen 146 D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD-S 221 (361)
T ss_pred h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH-H
Confidence 6 4776554322 12346788888889999999999998764 899999999999999999999999999976642 2
Q ss_pred CCceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 920 SNWTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
...+.-+|-..|||||.+.. ..|+-+|||||+|+++||+.||+.||..+......... +....++.+. ...+.
T Consensus 222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~----Vv~gdpp~l~-~~~~~ 296 (361)
T KOG1006|consen 222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQ----VVIGDPPILL-FDKEC 296 (361)
T ss_pred HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHH----HHcCCCCeec-Ccccc
Confidence 33456678889999999864 34788999999999999999999997755543222222 2222222222 22333
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+..+|--|+.+|-.+||...++.+
T Consensus 297 ~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 297 VHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 445567888899999999999999998865
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-32 Score=304.52 Aligned_cols=258 Identities=22% Similarity=0.328 Sum_probs=199.4
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-----e
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ-----H 833 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~-----~ 833 (1031)
+|.+.+.||+|++|.||+|... +++.||+|++.... .+....+.+.+|+.+++.++||||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF--DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc--ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccc
Confidence 4788899999999999999654 58999999987542 12344677899999999999999999999998775 7
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||++ ++|.+++.... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.++|+|||.+.
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred eEEEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 899999997 48888887543 588999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCC---CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh------
Q 043316 914 FLNPHS---SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN------ 983 (1031)
Q Consensus 914 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~------ 983 (1031)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||....... .+........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 152 GVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID-QLNLIVEVLGTPSEED 230 (330)
T ss_pred eecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHhcCCCChhH
Confidence 765443 123445678899999999887 78999999999999999999999986544211 0000000000
Q ss_pred -------------hhcCCCCCCCCh-hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 -------------QNLDHRLPTPSR-DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 -------------~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.... ........+.+++.+||+++|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 000000000000 00011245788999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=302.61 Aligned_cols=263 Identities=21% Similarity=0.306 Sum_probs=197.4
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS 829 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~ 829 (1031)
.+++....++|.+.+.||+|+||.||+|. ..+++.||+|++..... .....+.+.+|+.++++++||||+++++++.
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch--hhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 34555677899999999999999999995 45799999999875421 2223566889999999999999999999885
Q ss_pred cC------CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc
Q 043316 830 NA------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 830 ~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
.. ...+++++++ +++|.++++.. .+++..++.++.|+++|++|||+. +|+||||||+||+++.++.
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 43 3467888877 77998887643 478899999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH-
Q 043316 904 AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE- 981 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~- 981 (1031)
+||+|||++..... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .........
T Consensus 159 ~kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~ 234 (345)
T cd07877 159 LKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLV 234 (345)
T ss_pred EEEecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh
Confidence 99999999986432 2234567889999998766 46788999999999999999999998643321 100000000
Q ss_pred ------h------------hhhcCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 ------I------------NQNLDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ------~------------~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ....+......... .......+.+++.+|++.||.+||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0 00000000000000 0011235779999999999999999999875
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=297.47 Aligned_cols=248 Identities=26% Similarity=0.362 Sum_probs=193.0
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.|+..+.||+|++|.||+|.. .+++.+|+|.+...... .....+++.+|+++++.++|+|++++++++......++|+
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 366677899999999999965 46889999998643211 1223567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+. |++.+++.... ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9996 57877765432 3478899999999999999999999 9999999999999999999999999998865432
Q ss_pred CCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 919 SSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
....++..|+|||.+. .+.++.++||||+||++|||++|+.||....... ..........+... .
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~---~ 236 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNESPALQ---S 236 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-----HHHHHhhcCCCCcC---c
Confidence 2346788999999874 3467889999999999999999999975432210 01111111111111 1
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
......+.+++.+||+.+|++||++.++++.
T Consensus 237 --~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 237 --GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred --ccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 1223457789999999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=292.90 Aligned_cols=257 Identities=23% Similarity=0.346 Sum_probs=195.4
Q ss_pred cCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 838 (1031)
|.+.+.||+|++|+||+|... +++.||+|++...... .+.....+|+..+++++ ||||+++++++.+++..++||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 77 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVF 77 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEE
Confidence 567789999999999999764 5889999998654321 22334567999999999 999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+ ++++.+++.... ...+++.++..++.|++.+++|||++ +++|+||+|+||+++.++.++|+|||.+......
T Consensus 78 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 78 EYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred ecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 999 789988887653 23578999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH--------------HHhh
Q 043316 919 SSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI--------------TEIN 983 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~--------------~~~~ 983 (1031)
. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||........ ..... ....
T Consensus 153 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 153 P-PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-LYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred C-CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH-HHHHHHhcCCCChhhhhhHhhhh
Confidence 2 2234567889999998754 4578999999999999999999999864432110 00000 0000
Q ss_pred hhcCCCCCCCChhHH-----HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVM-----DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+....... .....+.+++.+||+.||++|||++|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 001111110000000 11246889999999999999999999975
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=296.63 Aligned_cols=246 Identities=26% Similarity=0.370 Sum_probs=192.3
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|...+.||+|+||+||+|.. .+++.||+|++...... .....+.+.+|++++++++|||++++++++.+....|+|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ-TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 56667899999999999965 47899999998654321 22334678899999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+. +++.+++.... ..+++.++..++.|++.|++|||+. |++||||+|+||+++.++.+||+|||++.....
T Consensus 102 ~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 102 YCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred cCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 996 57777775432 3578899999999999999999999 999999999999999999999999999865322
Q ss_pred CCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 920 SNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.....++..|+|||++. ++.++.++||||+||++|||++|..||........ .........+....
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~---- 242 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----LYHIAQNDSPTLQS---- 242 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-----HHHHHhcCCCCCCc----
Confidence 23456788999999974 35678899999999999999999999754432111 11111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+++.+||+.+|.+||++.++++
T Consensus 243 -~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 243 -NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred -cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011235778899999999999999999985
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=303.33 Aligned_cols=254 Identities=20% Similarity=0.313 Sum_probs=191.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------ 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 831 (1031)
++|...+.||+|+||.||+|.. .+++.||||++.+... .......+.+|+.++++++||||+++++++...
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ--SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc--cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 6899999999999999999964 5799999999875432 122345688999999999999999999998654
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++|+||+.. ++..+.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred ceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 346899999964 6766543 2478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH---------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE--------- 981 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~--------- 981 (1031)
++.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ..+......
T Consensus 164 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07879 164 ARHADA---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGPEFV 239 (342)
T ss_pred CcCCCC---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence 986532 2234467889999999876 45889999999999999999999998754321 111111000
Q ss_pred --hh----hhcCCCCCCCCh-hH----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 --IN----QNLDHRLPTPSR-DV----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 --~~----~~~~~~~~~~~~-~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .......+.... .. ......+.+++.+||+.||++||+++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 240 QKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 000000000000 00 011235779999999999999999999984
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-32 Score=303.69 Aligned_cols=261 Identities=20% Similarity=0.261 Sum_probs=194.0
Q ss_pred hccC-ccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhh----------cHHHHHHHHHHHhcCCCCceeeeee
Q 043316 759 DDFG-EKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMA----------DQDEFLNEVLALTEIRHRNIIKFHG 826 (1031)
Q Consensus 759 ~~~~-~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~----------~~~~~~~Ei~~l~~l~h~niv~l~~ 826 (1031)
++|. +.+.||+|+||+||+|.. .+++.||||+++......+.. ....+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 346799999999999964 478999999986543221110 1125779999999999999999999
Q ss_pred eEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 827 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
++..++..++||||++ ++|.+++.... .+++..+..++.|++.||+|||+. |++||||+|+||+++.++.++|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 9999999999999997 58988886543 478899999999999999999999 9999999999999999999999
Q ss_pred eccccccccCC--------------CCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 907 SDFGIAKFLNP--------------HSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 907 ~Dfg~a~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
+|||++..... .........++..|+|||.+.+. .++.++||||+||++|||++|+.||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999986641 11122234467889999998764 4688999999999999999999998654431
Q ss_pred chhhhhhHHHhhhhcCCCC-------------CCCChhH----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 972 FSSFSNMITEINQNLDHRL-------------PTPSRDV----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.................+ ...+... .....++.+++.+|++.+|++|||++|++.
T Consensus 241 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 241 -DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred -HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 111111111000000000 0000000 111345779999999999999999999975
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=290.49 Aligned_cols=253 Identities=21% Similarity=0.286 Sum_probs=195.5
Q ss_pred ccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhh-hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+|.+.+.||+|+||.||+|... .+..+++|.++...... .......+.+|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999999653 34556666654322111 122345677899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 838 SEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
+||+++++|.+++.... ....+++.+++.++.|++.|++|||+. |++|+||+|+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999886432 234689999999999999999999999 9999999999999974 679999999998764
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........++..|+|||...+..++.++|+||+|+++|+|++|..||..... ............+..+
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----- 226 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVVLRIVEGPTPSLP----- 226 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHcCCCCCCc-----
Confidence 433333445678899999998888889999999999999999999999753321 1111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....++.+++.+|++.+|++||++.|+++
T Consensus 227 -~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 227 -ETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -chhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 122346788999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-32 Score=285.95 Aligned_cols=258 Identities=25% Similarity=0.356 Sum_probs=196.5
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhh---hhhcHHHHHHHHHHHhcCCCCceeeeeeeEe-cCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFD---EMADQDEFLNEVLALTEIRHRNIIKFHGFCS-NAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~-~~~~ 833 (1031)
++|-....||+|+|+.||+| +....+.||||+-....... .....+...+|..+.+.++||.||++|+++. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 56777888999999999999 66678999999854332211 1122456789999999999999999999996 4567
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---CCCceEEeccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD---SEHEAHVSDFG 910 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg 910 (1031)
+|-|+|||+|.+|+-|++.+. .+++++++.|++||+.||.||.+. .++|||-||||.||++- .-|.+||+|||
T Consensus 543 FCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 899999999999999999875 478899999999999999999987 56899999999999995 34679999999
Q ss_pred cccccCCCCCC-------ceeeccccCcccccccccc----CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH
Q 043316 911 IAKFLNPHSSN-------WTAFAGTFGYAAPEIAHMM----RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 911 ~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~ 979 (1031)
+++.++.+.+. ....+||++|++||.+--+ ..+.|+||||+|||+|+.+.|+.||............
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe-- 696 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE-- 696 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh--
Confidence 99998765443 2346799999999976432 3577999999999999999999998755442111110
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVC 1026 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 1026 (1031)
..+.......++. ..... .+..++|++|+++.-++|....++.
T Consensus 697 NTIlkAtEVqFP~--KPvVs--seAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 697 NTILKATEVQFPP--KPVVS--SEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hchhcceeccCCC--CCccC--HHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 0111111112221 11111 2456789999999999998877764
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=293.97 Aligned_cols=258 Identities=23% Similarity=0.301 Sum_probs=199.1
Q ss_pred cCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|+..+.||+|++|.||+|... +++.||+|++.... .+....+.+.+|+.++++++|||++++++++.+.+..++|+|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN--EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc--ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEec
Confidence 456678999999999999654 59999999987653 122345677899999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|++ ++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 79 YCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred CcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 998 58999997653 3588999999999999999999999 99999999999999999999999999998765433
Q ss_pred CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh-----------hhh--
Q 043316 920 SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI-----------NQN-- 985 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~-----------~~~-- 985 (1031)
.......++..|+|||.+.+. .++.++||||+||++|||++|+.||...... .......... ...
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 153 RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCcHHHHHhhccccc
Confidence 333444567889999998776 7899999999999999999999997643321 1111100000 000
Q ss_pred cCCCCCCCChh-----HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRD-----VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+..... .......+.+++.+||+.||++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 01111110000 0111346889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=287.14 Aligned_cols=238 Identities=26% Similarity=0.356 Sum_probs=193.8
Q ss_pred eecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCC
Q 043316 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 845 (1031)
||+|+||.||+|... +++.+|+|++...... .....+.+.+|+.++++++||||+++++.+..+...++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKII-KRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhc-chHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 689999999999654 6899999998775432 22346688999999999999999999999999999999999999999
Q ss_pred chhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceee
Q 043316 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925 (1031)
Q Consensus 846 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 925 (1031)
|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.............
T Consensus 80 L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (250)
T cd05123 80 LFSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF 153 (250)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCC
Confidence 999997653 478899999999999999999998 99999999999999999999999999998765432233455
Q ss_pred ccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHH
Q 043316 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005 (1031)
Q Consensus 926 ~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1005 (1031)
.++..|+|||...+...+.++|+||+|+++||+++|+.||..... ......... ....++... ...+.
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~-~~~~~~~~~------~~~l~ 221 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILK-DPLRFPEFL------SPEAR 221 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhc-CCCCCCCCC------CHHHH
Confidence 678899999999888889999999999999999999999864432 111111111 111111111 23567
Q ss_pred HHHHhhccCCCCCCCCHH
Q 043316 1006 EVAILCLVESPEARPTMK 1023 (1031)
Q Consensus 1006 ~li~~cl~~dP~~Rps~~ 1023 (1031)
+++.+||..||++||+++
T Consensus 222 ~~i~~~l~~~p~~R~~~~ 239 (250)
T cd05123 222 DLISGLLQKDPTKRLGSG 239 (250)
T ss_pred HHHHHHhcCCHhhCCCcc
Confidence 889999999999999994
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-33 Score=272.13 Aligned_cols=262 Identities=21% Similarity=0.338 Sum_probs=195.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec------
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN------ 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------ 830 (1031)
...|+...++|+|.||+||+|+. .+|+.||+|++--.. +....-....+|+.++..++|+|++.++++|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen--eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN--EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc--cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 34566777899999999999954 468889998763321 112234567899999999999999999998843
Q ss_pred --CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 831 --AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 831 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
...+|+||++|+. +|.-.+.... .+++..++.++.+++..||.|+|.. .|+|||+||.|++++.+|.+||+|
T Consensus 94 r~r~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred cccceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 3458999999986 8888887642 4688899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCC----CCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchh--hhhhHHH
Q 043316 909 FGIAKFLNPHS----SNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS--FSNMITE 981 (1031)
Q Consensus 909 fg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~--~~~~~~~ 981 (1031)
||+++.+.... ..++..+.|.+|++||.+.| ..|+++.|||..|||+.||+||.+-++........ +......
T Consensus 168 FGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs 247 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGS 247 (376)
T ss_pred cccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhcc
Confidence 99998764332 23566788999999998876 46899999999999999999999887655442110 0000000
Q ss_pred hhh-------------hc--CCCCCCCChhHHHHHH------HHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 INQ-------------NL--DHRLPTPSRDVMDKLM------SIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ~~~-------------~~--~~~~~~~~~~~~~~~~------~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+.. .+ .+-.....+...+..+ +..+++..++..||.+|+++.+++.
T Consensus 248 ~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 248 ITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred CCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 000 00 0000111111222222 4678889999999999999999875
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=298.81 Aligned_cols=258 Identities=22% Similarity=0.319 Sum_probs=195.7
Q ss_pred HHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-CCe
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN-AQH 833 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-~~~ 833 (1031)
...++|++.+.||+|+||.||+|. ..+++.||||++.+... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS--TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 456789999999999999999995 45899999999865321 12235677899999999999999999999865 567
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++|+||+ +++|.++++.. .+++..+..++.|++.||+|||+. +|+||||+|+||+++.++.++|+|||.+.
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 89999998 56888888643 367788889999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH------------
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT------------ 980 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~------------ 980 (1031)
..... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... .......
T Consensus 157 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 157 IQDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN-QFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence 65322 233456889999998765 568999999999999999999999986543210 0000000
Q ss_pred -------HhhhhcCCCCCCCChhH-HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 -------EINQNLDHRLPTPSRDV-MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 -------~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..........+.+.... ......+.+++.+|++.+|++|||+.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000001010000 011246889999999999999999999975
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-32 Score=270.64 Aligned_cols=253 Identities=21% Similarity=0.271 Sum_probs=198.1
Q ss_pred HHhccCcc-ceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec---
Q 043316 757 AIDDFGEK-YCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN--- 830 (1031)
Q Consensus 757 ~~~~~~~~-~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~--- 830 (1031)
.+++|.+. ++||-|-.|.|-.+ +..+++++|+|++.. ..+..+|++..-.. .|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D---------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD---------SPKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc---------CHHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 45667654 57999999999999 556899999998744 34456888875555 59999999999854
Q ss_pred -CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEE
Q 043316 831 -AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHV 906 (1031)
Q Consensus 831 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 906 (1031)
...+.+|||.|+||.|...+++++ ...++++++..|.+||+.|+.|||+. +|.||||||+|+|.+.++ .+||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 356789999999999999998765 46699999999999999999999999 999999999999998544 6999
Q ss_pred eccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
+|||+|+.-.. .....+..-|+.|.|||++...+|+...|+||+||++|-|++|-+||=.... ...-..+..++..
T Consensus 206 tDfGFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg-~aispgMk~rI~~-- 281 (400)
T KOG0604|consen 206 TDFGFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-LAISPGMKRRIRT-- 281 (400)
T ss_pred cccccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC-ccCChhHHhHhhc--
Confidence 99999997543 3345667789999999999988999999999999999999999999632222 1111111112211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+..+..++..-.....++|+..+..+|.+|.|+.|+++
T Consensus 282 -gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 282 -GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred -cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1222223344455567789999999999999999999875
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=300.67 Aligned_cols=257 Identities=21% Similarity=0.310 Sum_probs=194.5
Q ss_pred HHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC---
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--- 832 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--- 832 (1031)
..++|++.+.||+|+||.||+|. ..+++.||||++.... ......+.+.+|+.++++++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 35679999999999999999995 5579999999986532 12233556889999999999999999999987653
Q ss_pred ---eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 833 ---HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 833 ---~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
..++||||+ +++|.+++... .+++..++.++.|++.|++|||+. ||+||||||+||+++.++.++++||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 458999999 67898887642 478899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH--------
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT-------- 980 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~-------- 980 (1031)
|++...... .....++..|+|||.+.+ ..++.++|+||+|+++|++++|+.||....... .......
T Consensus 163 g~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~ 238 (343)
T cd07880 163 GLARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTGTPSKE 238 (343)
T ss_pred ccccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHH
Confidence 999865432 233467889999999876 457889999999999999999999986443210 0000000
Q ss_pred ---Hhh----hhcCCCCCCCCh-hH----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 ---EIN----QNLDHRLPTPSR-DV----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 ---~~~----~~~~~~~~~~~~-~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+. .......+.... .. ......+.+++.+|++.||++|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 000000000000 00 011235779999999999999999999874
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=302.21 Aligned_cols=256 Identities=21% Similarity=0.282 Sum_probs=190.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------ 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 831 (1031)
.+|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~----~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC----CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 5788999999999999999954 578999999986543 23456788999999999999999999876543
Q ss_pred --------CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CC
Q 043316 832 --------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EH 902 (1031)
Q Consensus 832 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~ 902 (1031)
...++|+||++ ++|.+++... .+++..++.++.||+.|++|||+. ||+||||||+||+++. ++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 35789999997 5888887543 478899999999999999999999 9999999999999985 55
Q ss_pred ceEEeccccccccCCCCC---CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhh
Q 043316 903 EAHVSDFGIAKFLNPHSS---NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~ 978 (1031)
.+|++|||.+........ ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ....
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~ 231 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLI 231 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence 789999999986543211 1123457889999998654 4578899999999999999999999864432110 0000
Q ss_pred HH---------------Hhhhhc--CCCCCC-CChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 979 IT---------------EINQNL--DHRLPT-PSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 979 ~~---------------~~~~~~--~~~~~~-~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ...... ...... .... ......++.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 232 LESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00 000000 000000 0000 0011235778999999999999999999974
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=297.43 Aligned_cols=261 Identities=21% Similarity=0.282 Sum_probs=192.7
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA----- 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 831 (1031)
.++|++.++||+|+||.||+|.. .+++.+|||++......+ .....+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD--GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC--CcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 46899999999999999999965 468999999986543211 1234567899999999999999999987543
Q ss_pred ---CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 832 ---QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 832 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
...++|+||+.+ ++...+.... ..+++.++..++.|+++||+|||+. ||+||||||+||+++.++.++|+|
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 346999999975 6666665432 3589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCC-----------ceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhh
Q 043316 909 FGIAKFLNPHSSN-----------WTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 909 fg~a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~ 976 (1031)
||++......... .+...+++.|+|||.+.+. .++.++||||+||++|||++|+.||...... ....
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~ 237 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLH 237 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHH
Confidence 9999865432211 1233567889999987654 5789999999999999999999998644331 1111
Q ss_pred hhHHHhh--------------h----hcCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 977 NMITEIN--------------Q----NLDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 977 ~~~~~~~--------------~----~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....... . ......+..... .......+.+++.+|++.||++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1110000 0 000000100000 0111246789999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-32 Score=282.66 Aligned_cols=258 Identities=20% Similarity=0.254 Sum_probs=200.7
Q ss_pred HHHHhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC--CC----ceeeeeee
Q 043316 755 IKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR--HR----NIIKFHGF 827 (1031)
Q Consensus 755 ~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~----niv~l~~~ 827 (1031)
.....+|.+...+|+|.||.|-.+ ..+.+..||||+++.-. ...+...-|++++.++. .| -+|.+.++
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w 159 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-----KYREAALIEIEVLQKINESDPNGKFRCVQMRDW 159 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh
Confidence 334678999999999999999999 44568999999986532 34566778999999993 22 38889999
Q ss_pred EecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-------
Q 043316 828 CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS------- 900 (1031)
Q Consensus 828 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~------- 900 (1031)
|...++.|+|+|.+ |-|+.++++.+. ..+++..+++.|++|++++++|||+. +++|-||||+||++..
T Consensus 160 FdyrghiCivfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~ 234 (415)
T KOG0671|consen 160 FDYRGHICIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTY 234 (415)
T ss_pred hhccCceEEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEe
Confidence 99999999999988 569999998865 35688999999999999999999999 9999999999999931
Q ss_pred -------------CCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCC
Q 043316 901 -------------EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDY 967 (1031)
Q Consensus 901 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~ 967 (1031)
+..++|+|||.|+.-... ....+.|..|+|||++.+-.++.++||||+||||+|++||..-|+.
T Consensus 235 ~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 235 NPKKKVCFIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred ccCCccceeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 234899999999975433 3667889999999999999999999999999999999999998775
Q ss_pred cCccchhhhhhHHHhhhhcCCCCCC-----------------------------CCh-------hHHHHHHHHHHHHHhh
Q 043316 968 VSTNFSSFSNMITEINQNLDHRLPT-----------------------------PSR-------DVMDKLMSIMEVAILC 1011 (1031)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~-------~~~~~~~~l~~li~~c 1011 (1031)
.+.. +.-.+.+.+...++..... .+. ....+..++.+++++|
T Consensus 312 Hen~--EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~m 389 (415)
T KOG0671|consen 312 HENL--EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRM 389 (415)
T ss_pred CCcH--HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHH
Confidence 5421 1111222221111111000 000 0122334689999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 043316 1012 LVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1012 l~~dP~~Rps~~evl~ 1027 (1031)
+..||.+|+|+.|++.
T Consensus 390 L~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 390 LEFDPARRITLREALS 405 (415)
T ss_pred HccCccccccHHHHhc
Confidence 9999999999999875
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-31 Score=272.67 Aligned_cols=261 Identities=19% Similarity=0.272 Sum_probs=203.0
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeee
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~ 826 (1031)
++.....+++..-.+.+|.||.||.|.+. +.+.|-||.++... .+-....+..|--.+....|||+..+.+
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A---S~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA---SQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc---cHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 33334456777778999999999999443 24556777765543 1233566788888888899999999999
Q ss_pred eEec-CCeeEEEEEeccCCCchhhcc-----cCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC
Q 043316 827 FCSN-AQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 827 ~~~~-~~~~~lv~e~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
++.+ ....+.++.++.-|+|+.+++ +....+.++..+...++.|++.|++|||++ +|||.||.++|.++|+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 9854 567899999999999999998 333445577788899999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCCCc--eeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhh
Q 043316 901 EHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 901 ~~~~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~ 977 (1031)
..++||+|=.+++.+-+.++.. ...-.+..||+||.+....|+.++||||||+++|||+| |+.||...++ .++..
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP--fEm~~ 509 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP--FEMEH 509 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH--HHHHH
Confidence 9999999999999876654431 12234678999999999999999999999999999999 9999765544 33344
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.......... |. ++..++..++.-||+.+|++||+++|++.-|.
T Consensus 510 ylkdGyRlaQ---P~------NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 510 YLKDGYRLAQ---PF------NCPDELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred HHhccceecC---CC------CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 4333222211 11 22236777888999999999999999998764
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=300.58 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=210.9
Q ss_pred HHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe----
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS---- 829 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~---- 829 (1031)
.-.+.|++.+.||+|.+|.||+++ .++++.+|||+..... ...+++..|.++++.. +|||++.++|++.
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 334668889999999999999994 5679999999976643 2345567888888887 5999999999984
Q ss_pred -cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 830 -NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 830 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
.++.+|+|||||.+||..|+++.-. ..++.|..+..|++.+++|+.+||.. .++|||||-.||+++.++.||++|
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEee
Confidence 3578999999999999999998765 56789999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||.+...+.........+||+.|||||++.- ..|+.++|+||+|++..||.-|.+|+.+.......
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL--------- 237 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL--------- 237 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh---------
Confidence 9999988766666778899999999999853 34677999999999999999999997766552111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
-.++...++......+...++-++|..|+.+|-.+||++.++++
T Consensus 238 F~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 238 FLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 12233333333345566778999999999999999999999875
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=294.01 Aligned_cols=258 Identities=18% Similarity=0.233 Sum_probs=190.0
Q ss_pred ccCccceeecCCCccEEEEEeC-C--CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC----
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-S--GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA---- 831 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~---- 831 (1031)
+|++.+.||+|+||.||+|+.. + +..||+|++.... ......+.+.+|+.+++++ +||||+++++++...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 78 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF--SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNF 78 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc--ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccC
Confidence 4778889999999999999653 4 7899999986432 1122356778999999999 599999999975432
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++++||+. ++|.+++.... .+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||.
T Consensus 79 ~~~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 79 NELYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred CcEEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 45788899886 68988886543 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC----CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH-----
Q 043316 912 AKFLNPHSS----NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE----- 981 (1031)
Q Consensus 912 a~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~----- 981 (1031)
+........ ......|+..|+|||...+ ..++.++||||+||++|+|++|+.||...... .........
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~ 230 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPD 230 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCC
Confidence 986543221 1233568899999998765 46889999999999999999999998654321 000000000
Q ss_pred --------------hhhhcCCCCCC-CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 --------------INQNLDHRLPT-PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 --------------~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........... ...........+.+++.+|++.||++|||+.|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 231 EETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000 00000011246789999999999999999999874
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=319.06 Aligned_cols=149 Identities=27% Similarity=0.378 Sum_probs=132.3
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.++||+|+||.||+|... +++.||||+++..... .....+.+.+|+.+++.++||||+++++++......|+
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI-NKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc-CHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence 367899999999999999999654 7899999998764322 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
||||+++++|.+++.... .+++..++.++.||+.||+|||+. +||||||||+||+++.++.+||+|||+++
T Consensus 82 VmEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999997543 478889999999999999999999 99999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=299.24 Aligned_cols=256 Identities=20% Similarity=0.304 Sum_probs=195.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe---
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH--- 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~--- 833 (1031)
.++|++.+.||+|++|.||+|.. .+++.||||++..... .....+.+.+|+.++++++|||++++.+++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ--SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc--hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 46789999999999999999965 4688999999865321 12234667889999999999999999998866554
Q ss_pred ---eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 834 ---SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 834 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
.++|+||+ +++|.+++.. ..+++.++..++.|++.|++|||+. ||+||||||+||+++.++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 5699888875 3488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh------
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN------ 983 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~------ 983 (1031)
.+...... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ...........
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 164 LARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIMNLVGTPDEEL 239 (343)
T ss_pred cccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCCHHH
Confidence 99865432 234567889999998765 35788999999999999999999998644321 11111000000
Q ss_pred -------------hhcCCCCCCC-ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 -------------QNLDHRLPTP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 -------------~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......... ..........+.+++.+|++.||++|||+.||++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000000 0000111346889999999999999999999875
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=267.37 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=199.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 835 (1031)
..+|...++||+|+|+.|..++. ++.+.||+|++++..+.+ .++.+=...|-.+..+. +||.+|-+..+|+.+..++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-dedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCC-cccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 36788999999999999999965 568999999998876543 34555566677776665 6999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+|.||++||+|--++++.. .++++.++.+...|..||.|||++ ||+.||+|.+||++|..|++|++|+|+++.-
T Consensus 328 fvieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 9999999999988887654 488899999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhh--hhHHHhhhhcCCCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS--NMITEINQNLDHRLPTP 993 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 993 (1031)
-.++.....+.||+.|.|||++.+..|+..+|.|++|++++||+.|+.||+.......... +....+......+++..
T Consensus 402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprs 481 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRS 481 (593)
T ss_pred CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccce
Confidence 5555566789999999999999999999999999999999999999999985543322211 11111111111122211
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCC
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARP 1020 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rp 1020 (1031)
-..+...+++.-+.+||++|.
T Consensus 482 ------lsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 482 ------LSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ------eehhhHHHHHHhhcCCcHHhc
Confidence 112334566778999999985
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=290.76 Aligned_cols=239 Identities=22% Similarity=0.275 Sum_probs=191.7
Q ss_pred HhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 835 (1031)
.++|.....+|.|+|+.|-.+ ...+++..+||++.+... +..+|+.++... +||||+++.+.+.++.+.|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~--------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD--------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc--------ccccccchhhhhcCCCcceeecceecCCceee
Confidence 567888888999999999998 556789999999977521 123566665555 6999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee-CCCCceEEeccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL-DSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~Dfg~a~~ 914 (1031)
+|||++.++-+.+.+..... +. .++..|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|+|||.++.
T Consensus 393 ~v~e~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eeehhccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 99999999988887776532 33 67888999999999999999 99999999999999 5899999999999997
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... ....+-|..|.|||+.....|++++|+||+|++||+|++|+.||...... .+-......+.+..
T Consensus 466 ~~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~-- 533 (612)
T KOG0603|consen 466 LERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSE-- 533 (612)
T ss_pred Cchh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCcccc--
Confidence 6543 33445688999999999999999999999999999999999998755543 11111111222221
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+++.+||+.||.+||++.|+..
T Consensus 534 ----~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 534 ----CVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ----ccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 11225667889999999999999999864
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=284.31 Aligned_cols=245 Identities=24% Similarity=0.337 Sum_probs=196.0
Q ss_pred cceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 764 KYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
.++||.|.||+||-| ..++|+.||||++.+..... +......+|+.++++++||.||.+..-|+..+..+.|||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~--kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT--KQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCC--chHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence 478999999999999 55689999999998766433 234778899999999999999999999999999999999997
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEEeccccccccCCCC
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~ 919 (1031)
|.-|+-.+... .+++++..-..++.||+.||.|||.+ +|||+|+||+||++.... ++||||||+|+.++. .
T Consensus 647 GDMLEMILSsE--kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-k 720 (888)
T KOG4236|consen 647 GDMLEMILSSE--KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-K 720 (888)
T ss_pred chHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch-h
Confidence 65555444443 35788888889999999999999999 999999999999997543 699999999998864 3
Q ss_pred CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHH
Q 043316 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999 (1031)
Q Consensus 920 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1031)
......+||+.|+|||++..+.|...-|+||.|||+|--++|..||...++ +.+.++... +.-++..+.+
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd----IndQIQNAa------FMyPp~PW~e 790 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED----INDQIQNAA------FMYPPNPWSE 790 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc----hhHHhhccc------cccCCCchhh
Confidence 445678999999999999999999999999999999999999999764433 222222211 1112223334
Q ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHH
Q 043316 1000 KLMSIMEVAILCLVESPEARPTMKKVC 1026 (1031)
Q Consensus 1000 ~~~~l~~li~~cl~~dP~~Rps~~evl 1026 (1031)
......++|...++..-.+|-|...-+
T Consensus 791 is~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred cCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 444566777888888888888876543
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=285.89 Aligned_cols=246 Identities=24% Similarity=0.331 Sum_probs=202.8
Q ss_pred HhccCccceeecCCCccEEEEEeCCCc-EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGI-IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
..++.+...||-|+||.|=.++..... .+|+|++++..+.+. ...+.+..|-++|.+.+.|.||++|..|.+..++|+
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdt-kQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDT-KQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccch-hHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 355667778999999999999765443 499999988776443 446778899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
.||-|-||.++..+++.+. ++......++..+.+|++|||++ |||+|||||+|.++|.+|.+||.|||+|+.+.
T Consensus 498 LmEaClGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 498 LMEACLGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred hHHhhcCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 9999999999999998654 77788999999999999999999 99999999999999999999999999999986
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..... -+++||+.|.|||++.++..+.++|.||+|+++||+++|.+||+..+. ...+......+.....++
T Consensus 572 ~g~KT-wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp-mktYn~ILkGid~i~~Pr------- 642 (732)
T KOG0614|consen 572 SGRKT-WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP-MKTYNLILKGIDKIEFPR------- 642 (732)
T ss_pred cCCce-eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHhhhhhhhccc-------
Confidence 54433 458999999999999999999999999999999999999999886654 222333333333222221
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPT 1021 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps 1021 (1031)
...+...+++++.+..+|.+|.-
T Consensus 643 --~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 643 --RITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred --ccchhHHHHHHHHHhcCcHhhhc
Confidence 11224557788889999999974
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=276.11 Aligned_cols=219 Identities=19% Similarity=0.207 Sum_probs=174.6
Q ss_pred CCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCCchh
Q 043316 770 GRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTT 848 (1031)
Q Consensus 770 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 848 (1031)
|.+|.||+|.. .+++.||+|++.... .+.+|...+....||||+++++++.+....++||||+++|+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 89999999954 578999999986642 12344455555679999999999999999999999999999999
Q ss_pred hcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeeccc
Q 043316 849 ILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928 (1031)
Q Consensus 849 ~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt 928 (1031)
++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+...... .....++
T Consensus 75 ~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~ 145 (237)
T cd05576 75 HISKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVE 145 (237)
T ss_pred HHHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcC
Confidence 987543 478899999999999999999999 9999999999999999999999999988765432 2234457
Q ss_pred cCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHH
Q 043316 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVA 1008 (1031)
Q Consensus 929 ~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 1008 (1031)
..|+|||.+.+..++.++||||+|+++|||++|+.|++...... .......++.. ....+.+++
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------~~~~~~~~~~~------~~~~~~~li 209 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------NTHTTLNIPEW------VSEEARSLL 209 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------ccccccCCccc------CCHHHHHHH
Confidence 78999999988888999999999999999999998864322110 00001111111 123577889
Q ss_pred HhhccCCCCCCCCH
Q 043316 1009 ILCLVESPEARPTM 1022 (1031)
Q Consensus 1009 ~~cl~~dP~~Rps~ 1022 (1031)
.+|++.||++||++
T Consensus 210 ~~~l~~dp~~R~~~ 223 (237)
T cd05576 210 QQLLQFNPTERLGA 223 (237)
T ss_pred HHHccCCHHHhcCC
Confidence 99999999999996
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=296.94 Aligned_cols=244 Identities=27% Similarity=0.367 Sum_probs=188.9
Q ss_pred cCccceeecCCCcc-EEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEE
Q 043316 761 FGEKYCIGKGRQGS-VYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 838 (1031)
|...+++|.|+.|+ ||+|.. +||.||||++-.. ..+...+||..++.-+ |||||++++.-++.+..|+..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e-------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE-------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH-------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44556799999996 799987 7899999997543 2445679999998885 999999999999999999999
Q ss_pred EeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CC--ceEEeccccc
Q 043316 839 EYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EH--EAHVSDFGIA 912 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~--~~kl~Dfg~a 912 (1031)
|.|. .+|++++.... ..........+.+..|++.|++|||+. +||||||||+||||+. ++ .++|+|||++
T Consensus 583 ELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 583 ELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred hHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccc
Confidence 9996 59999998741 111112245678999999999999998 9999999999999986 33 6999999999
Q ss_pred cccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHhC-CCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 913 KFLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG-NHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 913 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG-~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
+.+..+... .....||.+|+|||++.....+.++||||+||++|+.++| .+||++.-.... ...... .....
T Consensus 659 Kkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~---NIl~~~-~~L~~ 734 (903)
T KOG1027|consen 659 KKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA---NILTGN-YTLVH 734 (903)
T ss_pred cccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh---hhhcCc-cceee
Confidence 988655432 3456789999999999998889999999999999999995 899875433211 111111 11111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
- .+. .+. +..++|.+|+++||..||++.+|+.
T Consensus 735 L-~~~----~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 L-EPL----PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred e-ccC----chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 0 000 111 5678999999999999999999974
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-30 Score=245.81 Aligned_cols=210 Identities=25% Similarity=0.336 Sum_probs=170.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 835 (1031)
.++...+..||+|+||.|-+-++ .+|...|||+++...- .+..++..+|+.+..+. .+|.+|.+||.....+..+
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn---~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN---SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC---hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 34555667799999999988844 5899999999976542 34577788899886655 6999999999999999999
Q ss_pred EEEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 836 IVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+.||.|+- ||..+-+.. .....+++..+-+|+..+++||.|||++- .++|||+||+|||++.+|++|+||||.+-.
T Consensus 122 IcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 122 ICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred EeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccccccee
Confidence 99999964 787765433 12345778888999999999999999984 899999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCccccccccc----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchh
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHM----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS 974 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~ 974 (1031)
+... -..+...|-..|||||.+.. ..|+-|+||||+|+.+.||.+++.||+.....+..
T Consensus 199 L~dS-iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~q 261 (282)
T KOG0984|consen 199 LVDS-IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQ 261 (282)
T ss_pred ehhh-hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHH
Confidence 6432 22233567788999998753 46889999999999999999999998866654333
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-30 Score=245.97 Aligned_cols=253 Identities=18% Similarity=0.287 Sum_probs=198.4
Q ss_pred HhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecC--Ce
Q 043316 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNA--QH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~--~~ 833 (1031)
.++|++.+++|+|.|++||.| ...+.++++||+++.- ..+.+.+|+.++..+. ||||++++++..+. ..
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 477899999999999999999 5567889999998653 3677899999999997 99999999999775 45
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEeccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGIA 912 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 912 (1031)
+.+|+||+++.+....-. .++..++..++.+++.||.|+|++ ||+|||+||+|+++|.. ...+|+|+|+|
T Consensus 110 paLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred chhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchH
Confidence 689999999877765543 366778999999999999999999 99999999999999965 46999999999
Q ss_pred cccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH------------
Q 043316 913 KFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI------------ 979 (1031)
Q Consensus 913 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~------------ 979 (1031)
.++.+. ......+.+..|.-||.+-. ..|+..-|+|||||++.+|++.+.||-...++.+......
T Consensus 181 EFYHp~-~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 181 EFYHPG-KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred hhcCCC-ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 998754 34566778889999998765 4578899999999999999999999877666654444332
Q ss_pred HHhhhhcCCCCCC----C-ChhHHH---------HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 980 TEINQNLDHRLPT----P-SRDVMD---------KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 980 ~~~~~~~~~~~~~----~-~~~~~~---------~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+..-..++++.. . ...+.. ...+..+++.+.+..|-.+|+|++|.++
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 1111112222211 0 000000 0135678889999999999999999864
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=299.43 Aligned_cols=257 Identities=20% Similarity=0.201 Sum_probs=167.8
Q ss_pred HHhccCccceeecCCCccEEEEEeC-C----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeee----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-S----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGF---- 827 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~---- 827 (1031)
..++|...+.||+|+||.||+|... + +..||||++.... ..+.+..|. +....+.++..++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~------~~e~~~~e~--l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG------AVEIWMNER--VRRACPNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc------hhHHHHHHH--HHhhchhhHHHHHHhhhcc
Confidence 3578999999999999999999654 5 7899999875432 111111111 111122222222221
Q ss_pred --EecCCeeEEEEEeccCCCchhhcccCCcc-----------------ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeee
Q 043316 828 --CSNAQHSFIVSEYLDRGSLTTILKDDAAA-----------------KEFGWNQRMNVIKGVANALSYLHHDCLPPIVH 888 (1031)
Q Consensus 828 --~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 888 (1031)
...+...++|+||+++++|.+++...... .......+..++.|++.||+|||+. +|+|
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiH 278 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVH 278 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 24567889999999999999988653210 0112345668999999999999999 9999
Q ss_pred CCCCCCCeeeCC-CCceEEeccccccccCCCC-CCceeeccccCcccccccccc----------------------CCCc
Q 043316 889 GDISSKNVLLDS-EHEAHVSDFGIAKFLNPHS-SNWTAFAGTFGYAAPEIAHMM----------------------RATE 944 (1031)
Q Consensus 889 ~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~----------------------~~~~ 944 (1031)
|||||+|||++. ++.+||+|||+|+.+.... .......+++.|+|||.+... .++.
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 999999999986 5799999999998654322 223456789999999965432 1334
Q ss_pred cccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH-------HhhhhcCCCCCCCChhHHH----HHHHHHHHHHhhcc
Q 043316 945 KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT-------EINQNLDHRLPTPSRDVMD----KLMSIMEVAILCLV 1013 (1031)
Q Consensus 945 ~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~cl~ 1013 (1031)
++||||+||++|||+++..|++.... .+..... ..................+ ......+++.+|++
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDSNLI---QFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCchHHH---HHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence 66999999999999998766432111 1111110 0011111111100000000 01134589999999
Q ss_pred CCCCCCCCHHHHHH
Q 043316 1014 ESPEARPTMKKVCN 1027 (1031)
Q Consensus 1014 ~dP~~Rps~~evl~ 1027 (1031)
.||++|||++|+++
T Consensus 436 ~dP~kR~ta~e~L~ 449 (566)
T PLN03225 436 FKGRQRISAKAALA 449 (566)
T ss_pred CCcccCCCHHHHhC
Confidence 99999999999985
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-29 Score=265.81 Aligned_cols=239 Identities=27% Similarity=0.428 Sum_probs=192.0
Q ss_pred CCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCCchhh
Q 043316 771 RQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTI 849 (1031)
Q Consensus 771 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 849 (1031)
+||.||+|... +++.+|+|++....... ..+.+.+|++.+++++|+|++++++++......++++||+++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK---KRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc---HHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 58999999665 58999999987654211 167899999999999999999999999999999999999999999999
Q ss_pred cccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeecccc
Q 043316 850 LKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929 (1031)
Q Consensus 850 l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~ 929 (1031)
+..... +++..++.++.+++++++|||+. +++|+||+|+||+++.++.++++|||.+....... ......++.
T Consensus 78 ~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~ 150 (244)
T smart00220 78 LKKRGR---LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTP 150 (244)
T ss_pred HHhccC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCc
Confidence 876432 78899999999999999999999 99999999999999999999999999998765432 334566788
Q ss_pred CccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHH
Q 043316 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAI 1009 (1031)
Q Consensus 930 ~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 1009 (1031)
.|+|||...+..++.++||||+|+++|++++|..||...... .............. ... ......++.+++.
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~----~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~i~ 222 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL----LELFKKIGKPKPPF-PPP---EWKISPEAKDLIR 222 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHhccCCCC-ccc---cccCCHHHHHHHH
Confidence 999999998888899999999999999999999997643221 11111111111111 000 0002236788999
Q ss_pred hhccCCCCCCCCHHHHHH
Q 043316 1010 LCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1010 ~cl~~dP~~Rps~~evl~ 1027 (1031)
+|+..+|++||++.++++
T Consensus 223 ~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 223 KLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHccCCchhccCHHHHhh
Confidence 999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-30 Score=254.80 Aligned_cols=259 Identities=23% Similarity=0.310 Sum_probs=194.6
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----Cee
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----QHS 834 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~~~ 834 (1031)
.+..+.||.|+||.||.+.. .+|+.||.|++.. .+......+.+.+|++++..++|.|++..+++.+.. ...
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn--vfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN--VFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcch--HHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 34456799999999999954 5899999999853 345667788999999999999999999999887654 356
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|.++|.|. .+|.+.+-... .++...+.-+++||++||.|||+. +|.||||||.|.+++.+-..||||||+++.
T Consensus 133 YV~TELmQ-SDLHKIIVSPQ---~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 133 YVLTELMQ-SDLHKIIVSPQ---ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLART 205 (449)
T ss_pred HHHHHHHH-hhhhheeccCC---CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccc
Confidence 88999985 58888887643 477788999999999999999999 999999999999999999999999999998
Q ss_pred cCCCC-CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccc-----------hhhhhhH--
Q 043316 915 LNPHS-SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNF-----------SSFSNMI-- 979 (1031)
Q Consensus 915 ~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~-----------~~~~~~~-- 979 (1031)
.+.+. ..++..+.|..|+|||+++|. .|+.+.||||.|||+.|++..+.-|+...... .....+.
T Consensus 206 ee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~A 285 (449)
T KOG0664|consen 206 WDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYA 285 (449)
T ss_pred cchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHH
Confidence 76543 346777889999999999985 58999999999999999998887776443321 0011111
Q ss_pred -HHhhhh-c--CCCCCCCC---h--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 980 -TEINQN-L--DHRLPTPS---R--DVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 980 -~~~~~~-~--~~~~~~~~---~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
+..... . ..+.+... . .....-.+-..+...++..||++|.+..+.+..
T Consensus 286 CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 286 CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 111111 1 11111100 0 000112234566778899999999998887643
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=282.04 Aligned_cols=266 Identities=17% Similarity=0.188 Sum_probs=180.1
Q ss_pred HHhccCccceeecCCCccEEEEEe-----------------CCCcEEEEEEccchhhhhh----------hhcHHHHHHH
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-----------------PSGIIFAVKKFNSQLLFDE----------MADQDEFLNE 809 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~----------~~~~~~~~~E 809 (1031)
..++|++.++||+|+||.||+|.. .+++.||||++........ ....+.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 357899999999999999999953 2457899999864321000 0112344567
Q ss_pred HHHHhcCCCCce-----eeeeeeEec--------CCeeEEEEEeccCCCchhhcccCCc---------------------
Q 043316 810 VLALTEIRHRNI-----IKFHGFCSN--------AQHSFIVSEYLDRGSLTTILKDDAA--------------------- 855 (1031)
Q Consensus 810 i~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~--------------------- 855 (1031)
+.++.+++|.++ ++++++|.. .+..++||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677777743 3568999999999999998864211
Q ss_pred cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC-ceeeccccCcccc
Q 043316 856 AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-WTAFAGTFGYAAP 934 (1031)
Q Consensus 856 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~gt~~y~aP 934 (1031)
...+++..+..++.|++.+++|||+. +|+||||||+||+++.++.+||+|||++......... .....+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12346778899999999999999999 9999999999999999999999999999765432211 1122347899999
Q ss_pred ccccccCC----------------------CccccchhhhHHHHHHHhCCC-CCCCcCccchh---hhhhHHHhhhhcCC
Q 043316 935 EIAHMMRA----------------------TEKYDVHSFGVLALEVIKGNH-PRDYVSTNFSS---FSNMITEINQNLDH 988 (1031)
Q Consensus 935 E~~~~~~~----------------------~~~sDvwslG~il~elltG~~-P~~~~~~~~~~---~~~~~~~~~~~~~~ 988 (1031)
|.+..... ..+.||||+||++|||++|.. ||......... +.............
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 98754221 124799999999999999875 65432111111 11111111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCC---CCCCCHHHHHH
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESP---EARPTMKKVCN 1027 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~Rps~~evl~ 1027 (1031)
..... ..........+++.+++..+| .+|+|++|+++
T Consensus 460 ~~~~~--~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 460 KYDFS--LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred CCCcc--cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11111 111122356788899999766 68999999985
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=262.94 Aligned_cols=256 Identities=21% Similarity=0.289 Sum_probs=194.3
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-----C---CceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-----H---RNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----h---~niv~l~~~~~ 829 (1031)
.+|.+.++||.|.|++||.| +..+.+.||+|+.+... ...+..+.||.++++++ | .+||++++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-----HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-----HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 57889999999999999999 55678999999987754 34566789999999883 3 36999999996
Q ss_pred c----CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC----
Q 043316 830 N----AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---- 901 (1031)
Q Consensus 830 ~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---- 901 (1031)
. +.++|||+|+. |.+|..+|..... +-++...+.+|++||+.||.|||..| ||||-||||+|||+..+
T Consensus 153 hsGpNG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~ 228 (590)
T KOG1290|consen 153 HSGPNGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDP 228 (590)
T ss_pred ecCCCCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccch
Confidence 5 46899999998 6689888876653 34788999999999999999999998 99999999999999000
Q ss_pred --------------------------------------------------------------------------------
Q 043316 902 -------------------------------------------------------------------------------- 901 (1031)
Q Consensus 902 -------------------------------------------------------------------------------- 901 (1031)
T Consensus 229 ~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~ 308 (590)
T KOG1290|consen 229 AKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPR 308 (590)
T ss_pred hhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 043316 902 -------------------------------------------------------------------------------- 901 (1031)
Q Consensus 902 -------------------------------------------------------------------------------- 901 (1031)
T Consensus 309 ~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~ 388 (590)
T KOG1290|consen 309 INGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPE 388 (590)
T ss_pred CCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCc
Confidence
Q ss_pred --CceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc-----chh
Q 043316 902 --HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN-----FSS 974 (1031)
Q Consensus 902 --~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~-----~~~ 974 (1031)
-.+||+|||-|+-+.. .++.-..|..|+|||++.|..|++.+||||++|+++||.||..-|+-.... ++.
T Consensus 389 ~di~vKIaDlGNACW~~k---hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH 465 (590)
T KOG1290|consen 389 CDIRVKIADLGNACWVHK---HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH 465 (590)
T ss_pred cceeEEEeeccchhhhhh---hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence 0167777777775432 234556799999999999999999999999999999999999887633221 222
Q ss_pred hhhhHHHhhhhcCC-----------------------CCCCC---------ChhHHHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 975 FSNMITEINQNLDH-----------------------RLPTP---------SRDVMDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 975 ~~~~~~~~~~~~~~-----------------------~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
++.+++-+ ..++. ++... .....+...++.+++.-||+.+|++||||
T Consensus 466 iA~i~ELL-G~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA 544 (590)
T KOG1290|consen 466 IALIMELL-GKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTA 544 (590)
T ss_pred HHHHHHHH-hhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccH
Confidence 22222111 11111 11111 11113445578999999999999999999
Q ss_pred HHHHH
Q 043316 1023 KKVCN 1027 (1031)
Q Consensus 1023 ~evl~ 1027 (1031)
.+.++
T Consensus 545 ~~cl~ 549 (590)
T KOG1290|consen 545 AQCLK 549 (590)
T ss_pred HHHhc
Confidence 99874
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=270.70 Aligned_cols=213 Identities=21% Similarity=0.295 Sum_probs=177.4
Q ss_pred HHHHHHHH---hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeee
Q 043316 751 YEEIIKAI---DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826 (1031)
Q Consensus 751 ~~~~~~~~---~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~ 826 (1031)
|..++++. .-|..++.||-|+||+|.++ +..+...||+|.+.+..+.. .........|..|+.+-+.+-||++|.
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~-rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLM-RNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHh-hhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 44444442 44788889999999999999 55567889999997765432 234566789999999999999999999
Q ss_pred eEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 827 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
.|++++.+|+||||++||++-.+|-+-+ -+.+..++.++.++..|+++.|+. |+|||||||+|||||.+|++||
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKL 770 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKL 770 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceee
Confidence 9999999999999999999988886543 377788899999999999999999 9999999999999999999999
Q ss_pred eccccccccC---------CCCCC---------------------------------ceeeccccCccccccccccCCCc
Q 043316 907 SDFGIAKFLN---------PHSSN---------------------------------WTAFAGTFGYAAPEIAHMMRATE 944 (1031)
Q Consensus 907 ~Dfg~a~~~~---------~~~~~---------------------------------~~~~~gt~~y~aPE~~~~~~~~~ 944 (1031)
+|||++.-+. ..... ....+||+.|+|||++....++.
T Consensus 771 TDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q 850 (1034)
T KOG0608|consen 771 TDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQ 850 (1034)
T ss_pred eeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccc
Confidence 9999996331 00000 00246999999999999999999
Q ss_pred cccchhhhHHHHHHHhCCCCCCCcCc
Q 043316 945 KYDVHSFGVLALEVIKGNHPRDYVST 970 (1031)
Q Consensus 945 ~sDvwslG~il~elltG~~P~~~~~~ 970 (1031)
..|.||.|||||||+.|+.||-....
T Consensus 851 ~cdwws~gvil~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 851 LCDWWSVGVILYEMLVGQPPFLADTP 876 (1034)
T ss_pred cchhhHhhHHHHHHhhCCCCccCCCC
Confidence 99999999999999999999854433
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-29 Score=269.38 Aligned_cols=202 Identities=23% Similarity=0.359 Sum_probs=173.3
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhh----cHHHHHHHHHHHhcCC---CCceeeeeee
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMA----DQDEFLNEVLALTEIR---HRNIIKFHGF 827 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~----~~~~~~~Ei~~l~~l~---h~niv~l~~~ 827 (1031)
+...+|+..+.+|+|+||.|+.|.+ ++...|+||.+.+..+-.+.- ..-.+--||++|..++ |+||++++++
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 4456799999999999999999954 457789999987765422111 1123557999999997 9999999999
Q ss_pred EecCCeeEEEEEec-cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 828 CSNAQHSFIVSEYL-DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 828 ~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
|++++.+|++||-. ++.+|++++.... ++++.++.-|++||+.|+++||+. ||||||||-+||.++.+|-+||
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEE
Confidence 99999999999976 4559999998765 488899999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCC
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPR 965 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~ 965 (1031)
+|||.|.... .+....++||..|.|||++.|.+| +..-|||++|+++|.++....||
T Consensus 712 idfgsaa~~k--sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 712 IDFGSAAYTK--SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred eeccchhhhc--CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 9999998753 345678999999999999999887 67789999999999999988884
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=249.17 Aligned_cols=255 Identities=22% Similarity=0.291 Sum_probs=194.9
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------ 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 831 (1031)
.+|...+.+|.|+- .|..| +.-.+++||+|+.... +......++..+|...+..++|+||++++.++...
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p--f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP--FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCc--cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 35666777899988 66666 4557999999998766 34455677889999999999999999999999653
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...|+|||+|+ .+|...+.- +++=.++..++.|++.|+.|||+. ||+||||||+||++..+..+||.|||+
T Consensus 94 ~e~y~v~e~m~-~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 94 QEVYLVMELMD-ANLCQVILM-----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred HhHHHHHHhhh-hHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 46799999996 488777762 355578889999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhh--------------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN-------------- 977 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~-------------- 977 (1031)
|+..+.. -.++..+.|..|+|||++.+..+.+.+||||.||++.||++|+.-|.+... .+.|..
T Consensus 165 ar~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~-idQ~~ki~~~lgtpd~~F~~ 242 (369)
T KOG0665|consen 165 ARTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDH-IDQWNKIIEQLGTPDPSFMK 242 (369)
T ss_pred hcccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchH-HHHHHHHHHHhcCCCHHHHH
Confidence 9976544 457788999999999999998899999999999999999999987763321 111111
Q ss_pred hHHHhhhhc-----------------CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 978 MITEINQNL-----------------DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 978 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+ +..++..............+++.+|+..||++|.+++++++
T Consensus 243 qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 243 QLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 111111100 00011100111111224678899999999999999999875
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=261.79 Aligned_cols=268 Identities=19% Similarity=0.202 Sum_probs=208.3
Q ss_pred ccHHHHHHHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC------CCce
Q 043316 749 FLYEEIIKAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR------HRNI 821 (1031)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~ni 821 (1031)
|.+.-....-.+|.+....|+|-|++|.+|. ...|..||||+|....+ ..+.=.+|++++++++ -.|+
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-----M~KtGl~EleiLkKL~~AD~Edk~Hc 496 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-----MHKTGLKELEILKKLNDADPEDKFHC 496 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-----HhhhhhHHHHHHHHhhccCchhhhHH
Confidence 3333333445789999999999999999994 45688999999977543 3444578999999994 3489
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
++++..|....++|+|+|-.. .+|.+.++..+..-.+....+..+++|+.-||..|-.. ||+|.||||.||||++.
T Consensus 497 lrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 497 LRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNES 572 (752)
T ss_pred HHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccC
Confidence 999999999999999999774 58999998776666688899999999999999999988 99999999999999975
Q ss_pred C-ceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh------
Q 043316 902 H-EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS------ 974 (1031)
Q Consensus 902 ~-~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~------ 974 (1031)
. .+||||||.|..... ...+....+..|.|||++.|-+|+...|+||.||+|||++||+.-|.+...+...
T Consensus 573 k~iLKLCDfGSA~~~~e--neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~ 650 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASE--NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMEL 650 (752)
T ss_pred cceeeeccCcccccccc--ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHh
Confidence 5 589999999987653 3345666788999999999999999999999999999999999887655443100
Q ss_pred ---hhhhH----HHhhhhcCCC-----------------------------------CCCCChhHHHHHHHHHHHHHhhc
Q 043316 975 ---FSNMI----TEINQNLDHR-----------------------------------LPTPSRDVMDKLMSIMEVAILCL 1012 (1031)
Q Consensus 975 ---~~~~~----~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~l~~li~~cl 1012 (1031)
+...+ +-....++.. .+..+.+....+.++.+++..|+
T Consensus 651 KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml 730 (752)
T KOG0670|consen 651 KGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKML 730 (752)
T ss_pred cCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHh
Confidence 00000 0000001100 01133444566778999999999
Q ss_pred cCCCCCCCCHHHHHH
Q 043316 1013 VESPEARPTMKKVCN 1027 (1031)
Q Consensus 1013 ~~dP~~Rps~~evl~ 1027 (1031)
..||++|.|..+.+.
T Consensus 731 ~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 731 ILDPEKRITVNQALK 745 (752)
T ss_pred ccChhhcCCHHHHhc
Confidence 999999999999875
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=241.09 Aligned_cols=212 Identities=31% Similarity=0.524 Sum_probs=184.9
Q ss_pred eecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCC
Q 043316 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 845 (1031)
||+|++|.||++... +++.+++|++....... ..+.+.+|++.++.++|++++++++++......++++||+++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999764 48999999987654211 35778999999999999999999999999999999999999999
Q ss_pred chhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEeccccccccCCCCCCcee
Q 043316 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVSDFGIAKFLNPHSSNWTA 924 (1031)
Q Consensus 846 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~ 924 (1031)
|.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+............
T Consensus 78 l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 152 (215)
T cd00180 78 LKDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT 152 (215)
T ss_pred HHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhc
Confidence 999987642 3478899999999999999999999 9999999999999999 899999999999876543322344
Q ss_pred eccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHH
Q 043316 925 FAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003 (1031)
Q Consensus 925 ~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1031)
..+...|++||..... .++.++|+|++|+++++| ..
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~ 189 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PE 189 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HH
Confidence 5678899999998877 788999999999999999 46
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 1004 IMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 1004 l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
+.+++.+|++.+|++||++.++++.+
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 77889999999999999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-28 Score=267.30 Aligned_cols=252 Identities=26% Similarity=0.336 Sum_probs=201.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|+..+++|.|.||.||||+. .+++..|||+++-... .+.+-..+|+-+++..+|||||.++|.+...+..|+.
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~----dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG----DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCC----ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 5688889999999999999954 5799999999876432 2455667899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+.+|+|++.-+..+ .+++.++..+.+...+|++|||+. |-+|||||-.||++++.|.+|++|||.+-.+..
T Consensus 91 MEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 99999999999877654 588899999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCceeeccccCccccccc---cccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIA---HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.-.....+.||+.|||||+. ..+.|..++|||+.|+...|+---+.|--+.... +......+ ....++..
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--r~l~LmTk-S~~qpp~l---- 237 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--RALFLMTK-SGFQPPTL---- 237 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--HHHHHhhc-cCCCCCcc----
Confidence 55556788999999999975 3567889999999999999998777772222111 00000011 01111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+.-+....+-++++.|+.++|++||++..++.
T Consensus 238 kDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 238 KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 222233446778899999999999999987654
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-29 Score=257.16 Aligned_cols=286 Identities=21% Similarity=0.217 Sum_probs=140.8
Q ss_pred CCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccc-cccccccCcccc
Q 043316 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQ-NQLRGSIPFSLA 242 (1031)
Q Consensus 164 ~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~ 242 (1031)
++|..+. ..-+.++|..|+++...|.+|+.+.+|+.|||++|+|+.+-|.+|.++.+|..|-+-+ |+|+...-..|+
T Consensus 60 eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~ 137 (498)
T KOG4237|consen 60 EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFG 137 (498)
T ss_pred cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhh
Confidence 4555443 2345566666666643445566666666666666666655566666666655554444 666633233556
Q ss_pred ccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC------------CCCC
Q 043316 243 NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS------------GSIP 310 (1031)
Q Consensus 243 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~------------~~~p 310 (1031)
+|..|+.|.+.-|++.-...+.|..|++|..|.+..|.+...-...|..+..++.+.+..|.+. ...|
T Consensus 138 gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ 217 (498)
T KOG4237|consen 138 GLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNP 217 (498)
T ss_pred hHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhch
Confidence 6666666666666666555556666666666666666665222225666666666666655521 1122
Q ss_pred CCCCChhhhhhhhccccccCCCCccccccc-ccCceEEcccCCCcCccC-CccCcccccceEEccccccCCCccccccCC
Q 043316 311 PTQGNLEALSELGLYINQLDGVIPPSIGNL-SSLRTLYLYDNGFYGLVP-NEIGYLKSLSKLELCRNHLSGVIPHSIGNL 388 (1031)
Q Consensus 311 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 388 (1031)
..++...-..-..+.++++..+-+..|... ..+..=..+.+...+.-| ..|..+++|++|+|++|+++++-+.+|.++
T Consensus 218 ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~ 297 (498)
T KOG4237|consen 218 IETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGA 297 (498)
T ss_pred hhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcch
Confidence 233333333333344444433323222211 111111111121222222 234455555555555555554445555555
Q ss_pred CCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccC
Q 043316 389 TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451 (1031)
Q Consensus 389 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 451 (1031)
..+++|.|.+|+|..+....|.++..|+.|+|.+|+|+.+.+.+|..+..|.+|+|-.|.+.+
T Consensus 298 a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 298 AELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred hhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 555555555555554444455555555555555555555555555555555555555544443
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-28 Score=255.44 Aligned_cols=398 Identities=24% Similarity=0.240 Sum_probs=186.5
Q ss_pred cccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccc-ccccccCCcccccCCCCCeeeec
Q 043316 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE-NQLFGSIPLSFSNLSSLTLMSLF 301 (1031)
Q Consensus 223 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~ 301 (1031)
-..++|..|+|+...|..|+.+++|++|||++|.|+.+-|++|.++++|..|-+.+ |+|+......|.+|.+|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 34445555555533334455555555555555555555555555555544444433 44543222345555555555555
Q ss_pred cCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCc
Q 043316 302 NNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVI 381 (1031)
Q Consensus 302 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 381 (1031)
-|++.-.....|..|++|..|.+..|.+....-.+|..+..++.+.+..|.+.. ..+++.+.. .....
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----dCnL~wla~-------~~a~~ 216 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----DCNLPWLAD-------DLAMN 216 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----ccccchhhh-------HHhhc
Confidence 555544444444455555555555555442222244445555555554444210 000000000 11112
Q ss_pred cccccCCCCCceEeccCcccCCcCchhccCC-cccc-ceeccccccccccccccCCCCCCCeeccccccccCcccccccC
Q 043316 382 PHSIGNLTKLVLVNMCENHLFGLIPKSFRNL-TSLE-RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRN 459 (1031)
Q Consensus 382 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 459 (1031)
|..++......-..+..+++..+.+..|... ..+. .+....+....-+...|..+++|+.|+|++|+++.+....|..
T Consensus 217 ~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~ 296 (498)
T KOG4237|consen 217 PIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEG 296 (498)
T ss_pred hhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcc
Confidence 2233333333333333444433333333211 1111 1111111222222233444444444444444444444444444
Q ss_pred CCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccC----------------
Q 043316 460 FPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSG---------------- 523 (1031)
Q Consensus 460 ~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~---------------- 523 (1031)
...+++|.|..|+|...-...|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|.+-.
T Consensus 297 ~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~ 376 (498)
T KOG4237|consen 297 AAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSV 376 (498)
T ss_pred hhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCC
Confidence 4444444444444443333444444445555555555554445555555555555444443320
Q ss_pred -CCcccccccCccceeecCcCcCCC---CCcccc---------cCCCccceecccCcccCCCCchhhccccccCceeccC
Q 043316 524 -GVPLEFGSLTELQYLDLSANKLSS---SIPKSM---------GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590 (1031)
Q Consensus 524 -~~~~~~~~l~~L~~L~Ls~N~l~~---~~p~~~---------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 590 (1031)
..|. -+....++.++++.+.+.. ..|+.. ..++-+.+..=..|+....+|..+.. .-++|++.+
T Consensus 377 ~~~~~-Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP~--d~telyl~g 453 (498)
T KOG4237|consen 377 VGNPR-CQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIPV--DVTELYLDG 453 (498)
T ss_pred CCCCC-CCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCCCc--hhHHHhccc
Confidence 0111 1122345666666554431 122221 22333444433334433345544432 457788889
Q ss_pred cccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccc
Q 043316 591 NFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639 (1031)
Q Consensus 591 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 639 (1031)
|.++ .+|.+ .+.+| .+++++|+|..+--..|.++..|.+|-+++|
T Consensus 454 n~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 454 NAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred chhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 9888 67766 56777 8899999998887778888888988888886
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-27 Score=230.84 Aligned_cols=252 Identities=18% Similarity=0.258 Sum_probs=189.2
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeee-EecCCe
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGF-CSNAQH 833 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~-~~~~~~ 833 (1031)
..+.|.+.+.+|+|.||.+-.+++ .+.+.+++|.+.... ...++|.+|...--.+. |.||+.-|++ |+..+.
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence 346789999999999999999965 467889999987754 46789999998766664 8999987765 678888
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-C-CCceEEecccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-S-EHEAHVSDFGI 911 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~-~~~~kl~Dfg~ 911 (1031)
+++++||++.|+|..-+...+ +.+..-.+++.|++.|+.|||++ ++||||||.+||||- . ...+|+||||.
T Consensus 97 YvF~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred EEEeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccc
Confidence 899999999999988887643 66677889999999999999999 999999999999994 3 34799999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc---c--CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM---M--RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
.+..+..- ...--+..|.|||.... + ...+.+|||.||+++|..+||+.||+........+....++.....
T Consensus 170 t~k~g~tV---~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 170 TRKVGTTV---KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN 246 (378)
T ss_pred ccccCcee---hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC
Confidence 98654321 12223567899997532 2 3467899999999999999999999855544455555444443332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. +.|. .+.......+.+.++-+.++|++|--..++.+
T Consensus 247 ~-~~P~---~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 247 P-ALPK---KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred c-cCch---hhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 2 2222 22222334556677889999999954444433
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-25 Score=282.55 Aligned_cols=357 Identities=22% Similarity=0.245 Sum_probs=242.0
Q ss_pred CCEEEEEecCCccc-cccCCccccCCCcccEEecCCCc------CcCCCccccccC-CcCcEeeCCCCcccCCCCccccc
Q 043316 76 GRVISISLSSLGLN-GTFQDFSFSSFPHLMYLNLSCNV------LYGNIPPQISNL-SKLRALDLGNNQLSGVIPQEIGH 147 (1031)
Q Consensus 76 ~~v~~l~l~~~~l~-g~~~~~~~~~l~~l~~L~l~~n~------~~~~~p~~~~~l-~~L~~L~l~~n~l~~~~p~~~~~ 147 (1031)
.+|.++.|.-.... -.+++..|.++++|+.|.+..+. +...+|..+..+ .+|+.|++.++.++ .+|..+ .
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~ 609 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-R 609 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-C
Confidence 35555555433222 13445568889999999986653 334678777776 46999999999887 788877 5
Q ss_pred cccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccccccccccc
Q 043316 148 LTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILD 227 (1031)
Q Consensus 148 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 227 (1031)
..+|+.|++++|++. .+|..+..+++|+.|+|++|...+.+|. ++.+++|+.|+|++|.....+|..++++++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 789999999999987 7888889999999999998876667874 88899999999999876678899999999999999
Q ss_pred ccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC-
Q 043316 228 LSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS- 306 (1031)
Q Consensus 228 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~- 306 (1031)
+++|...+.+|..+ ++++|+.|++++|...+.+|.. ..+|++|+|++|.+. .+|..+ .+++|+.|++.++...
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~ 761 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEK 761 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhh
Confidence 99876555788766 7889999999988766556643 457888889998886 567654 5778888887764321
Q ss_pred ------CCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCC
Q 043316 307 ------GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV 380 (1031)
Q Consensus 307 ------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 380 (1031)
...+......++|+.|++++|...+.+|.+++++++|+.|++++|...+.+|..+ .+++|+.|++++|.....
T Consensus 762 l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~ 840 (1153)
T PLN03210 762 LWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRT 840 (1153)
T ss_pred ccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccc
Confidence 1111122233566677777766666666667777777777776665444555544 566666777766654333
Q ss_pred ccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccc
Q 043316 381 IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQN 447 (1031)
Q Consensus 381 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 447 (1031)
+|.. .++|++|++++|.++. +|.++..+++|+.|++++|+-....+..+..+++|+.+++++|
T Consensus 841 ~p~~---~~nL~~L~Ls~n~i~~-iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 841 FPDI---STNISDLNLSRTGIEE-VPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred cccc---ccccCEeECCCCCCcc-ChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 3332 2456666666666654 3455566666666666554322222333344444555444443
|
syringae 6; Provisional |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-25 Score=233.39 Aligned_cols=199 Identities=29% Similarity=0.458 Sum_probs=171.9
Q ss_pred cCccceeecCCCccEEEEEeCC-CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ...+.+.+|++.+++++|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEe
Confidence 4567889999999999996654 899999999765422 246788899999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++++|.+++..... .+++..+..++.+++.++++||+. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 78 YCEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred ccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 9999999999876432 178899999999999999999999 99999999999999999999999999998765432
Q ss_pred -CCceeeccccCccccccc-cccCCCccccchhhhHHHHHHHhCCCCCCC
Q 043316 920 -SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGNHPRDY 967 (1031)
Q Consensus 920 -~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~elltG~~P~~~ 967 (1031)
.......++..|++||.. ....++.++|||++|+++|||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122345678899999998 666778899999999999999999999854
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-25 Score=235.34 Aligned_cols=202 Identities=27% Similarity=0.355 Sum_probs=167.2
Q ss_pred HHHHHhccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeE
Q 043316 754 IIKAIDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFC 828 (1031)
Q Consensus 754 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~ 828 (1031)
+......|...++||+|.|++||+|... ..+.||+|.+.... ....+.+|++++..+. +.||+++.+++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts------~p~ri~~El~~L~~~gG~~ni~~~~~~~ 104 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS------SPSRILNELEMLYRLGGSDNIIKLNGCF 104 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc------CchHHHHHHHHHHHhccchhhhcchhhh
Confidence 3444567889999999999999999442 47899999986543 3566889999999996 99999999999
Q ss_pred ecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEe
Q 043316 829 SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVS 907 (1031)
Q Consensus 829 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~ 907 (1031)
..++...+|+||++.....++... ++..++..+++.+..||+++|+. |||||||||+|++.+. .+.-.|+
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~Lv 175 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLV 175 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEE
Confidence 999999999999999988888765 56788999999999999999999 9999999999999985 5678999
Q ss_pred ccccccccCCCC-----------------C---------------C------------ceeeccccCccccccccc-cCC
Q 043316 908 DFGIAKFLNPHS-----------------S---------------N------------WTAFAGTFGYAAPEIAHM-MRA 942 (1031)
Q Consensus 908 Dfg~a~~~~~~~-----------------~---------------~------------~~~~~gt~~y~aPE~~~~-~~~ 942 (1031)
|||+|...+... + . ....+||++|+|||++.+ ..-
T Consensus 176 DFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Q 255 (418)
T KOG1167|consen 176 DFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQ 255 (418)
T ss_pred echhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCc
Confidence 999997221000 0 0 012469999999999876 346
Q ss_pred CccccchhhhHHHHHHHhCCCCCCCcCc
Q 043316 943 TEKYDVHSFGVLALEVIKGNHPRDYVST 970 (1031)
Q Consensus 943 ~~~sDvwslG~il~elltG~~P~~~~~~ 970 (1031)
++++||||.|+|+..+++++.||-...+
T Consensus 256 ttaiDiws~GVI~Lslls~~~PFf~a~d 283 (418)
T KOG1167|consen 256 TTAIDIWSAGVILLSLLSRRYPFFKAKD 283 (418)
T ss_pred CCccceeeccceeehhhccccccccCcc
Confidence 8899999999999999999999754433
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-24 Score=274.40 Aligned_cols=344 Identities=23% Similarity=0.279 Sum_probs=190.0
Q ss_pred ccccCCcCcEeeCCCCc------ccCCCCccccccc-cceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCc
Q 043316 120 QISNLSKLRALDLGNNQ------LSGVIPQEIGHLT-CLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS 192 (1031)
Q Consensus 120 ~~~~l~~L~~L~l~~n~------l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~ 192 (1031)
.|.++.+|+.|.+..+. +...+|..+..++ +|+.|++++|.++ .+|..+ ...+|++|+|++|++. .+|..
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~ 629 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDG 629 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccc
Confidence 45666777777665442 2234566565553 4677777666665 666655 4566666777666665 56666
Q ss_pred ccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccc
Q 043316 193 LGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLF 272 (1031)
Q Consensus 193 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 272 (1031)
+..+++|++|+|++|...+.+|. ++.+++|++|+|++|.....+|..++++++|+.|++++|...+.+|..+ ++++|+
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~ 707 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLY 707 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCC
Confidence 66666666666666554445553 5666666666666665555666666666666666666654444455444 566666
Q ss_pred ccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCC
Q 043316 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNG 352 (1031)
Q Consensus 273 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 352 (1031)
.|++++|...+.+|.. .++|+.|++++|.++ .+|..+ .+++|++|++.++.... ++. .
T Consensus 708 ~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~-l~~----------------~ 765 (1153)
T PLN03210 708 RLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEK-LWE----------------R 765 (1153)
T ss_pred EEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhh-ccc----------------c
Confidence 6666666544444432 345566666666654 344433 34555555554422110 000 0
Q ss_pred CcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccc
Q 043316 353 FYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEA 432 (1031)
Q Consensus 353 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 432 (1031)
+....+..+...++|+.|++++|...+.+|.+++++++|+.|++++|...+.+|... ++++|++|++++|......+.
T Consensus 766 ~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~- 843 (1153)
T PLN03210 766 VQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD- 843 (1153)
T ss_pred ccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc-
Confidence 111111122233456666666665555566666666666666666654333344433 566667777766543222221
Q ss_pred cCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCc
Q 043316 433 FGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLN 512 (1031)
Q Consensus 433 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 512 (1031)
...+|+.|+|++|.++ .+|..+..+++|+.|+|++|.--..+|..+..+++|+
T Consensus 844 --~~~nL~~L~Ls~n~i~-------------------------~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~ 896 (1153)
T PLN03210 844 --ISTNISDLNLSRTGIE-------------------------EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLE 896 (1153)
T ss_pred --cccccCEeECCCCCCc-------------------------cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCC
Confidence 1245666666665554 3455556666667777766332224555566666666
Q ss_pred eeecccc
Q 043316 513 KLILNLN 519 (1031)
Q Consensus 513 ~L~L~~N 519 (1031)
.|++++|
T Consensus 897 ~L~l~~C 903 (1153)
T PLN03210 897 TVDFSDC 903 (1153)
T ss_pred eeecCCC
Confidence 6666655
|
syringae 6; Provisional |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.8e-24 Score=214.59 Aligned_cols=165 Identities=19% Similarity=0.183 Sum_probs=125.4
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCce
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 923 (1031)
|+|.++++... ..+++.+++.++.|++.||+|||++ + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 68889987542 3589999999999999999999998 6 999999999999999 99998764322
Q ss_pred eeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHH--
Q 043316 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL-- 1001 (1031)
Q Consensus 924 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1001 (1031)
..|++.|+|||++.+..++.++||||+||++|||+||+.||............ .........+..........
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 138 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEI----LLNGMPADDPRDRSNLESVSAA 138 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHH----HHHHhccCCccccccHHHHHhh
Confidence 25789999999999999999999999999999999999998644332111111 11111111111111111112
Q ss_pred HHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 1002 MSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 1002 ~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..+.+++.+||+.||++||++.|+++.+.
T Consensus 139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 139 RSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred hhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 25889999999999999999999998763
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-24 Score=269.92 Aligned_cols=194 Identities=16% Similarity=0.204 Sum_probs=138.6
Q ss_pred cCCC-CceeeeeeeE-------ecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 043316 815 EIRH-RNIIKFHGFC-------SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886 (1031)
Q Consensus 815 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 886 (1031)
.++| +||++++++| .+...++.++||+ +++|.+++.... ..+++.++..++.||++||+|||++ ||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3455 5788888877 2234567888987 569999997532 4588999999999999999999999 99
Q ss_pred eeCCCCCCCeeeCC-------------------CCceEEeccccccccCCCC----------------CCceeeccccCc
Q 043316 887 VHGDISSKNVLLDS-------------------EHEAHVSDFGIAKFLNPHS----------------SNWTAFAGTFGY 931 (1031)
Q Consensus 887 vH~Dlkp~NIll~~-------------------~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~gt~~y 931 (1031)
+||||||+|||++. ++.+|++|||+++...... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999964 4456666777665421100 001123578899
Q ss_pred cccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhh
Q 043316 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILC 1011 (1031)
Q Consensus 932 ~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 1011 (1031)
||||++.+..++.++|||||||++|||++|..|+..... ......... .++ ..........+++.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-------~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~ 248 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-------TMSSLRHRV---LPP---QILLNWPKEASFCLWL 248 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-------HHHHHHHhh---cCh---hhhhcCHHHHHHHHHh
Confidence 999999999999999999999999999999888542211 111111111 111 0111223445778899
Q ss_pred ccCCCCCCCCHHHHHH
Q 043316 1012 LVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1012 l~~dP~~Rps~~evl~ 1027 (1031)
|++||.+||++.|+++
T Consensus 249 L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 249 LHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCCChhhCcChHHHhh
Confidence 9999999999999975
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-23 Score=250.69 Aligned_cols=264 Identities=26% Similarity=0.349 Sum_probs=143.9
Q ss_pred cCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEec
Q 043316 126 KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN 205 (1031)
Q Consensus 126 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~ 205 (1031)
+-..|||++|.++ .+|+.+.. +|+.|++++|+++ .+|.. +++|++|+|++|+++ .+|.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~~--~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLPA--HITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchhc--CCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 3445555555555 45554432 4555555555555 34432 345555556555555 44432 2455556666
Q ss_pred ccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccC
Q 043316 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285 (1031)
Q Consensus 206 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 285 (1031)
+|.++ .+|..+ ++|+.|+|++|+++ .+|.. +++|+.|+|++|++++. |... .+|+.|++++|+++ .+
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~L-p~lp---~~L~~L~Ls~N~L~-~L 337 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASL-PALP---SELCKLWAYNNQLT-SL 337 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCccccC-CCCc---ccccccccccCccc-cc
Confidence 66555 344322 34555566666665 34432 24566666666666542 3221 24555666666665 24
Q ss_pred CcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCccc
Q 043316 286 PLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLK 365 (1031)
Q Consensus 286 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 365 (1031)
|.. ..+|+.|+|++|+|++ +|... .+|+.|++++|+|++ +|.. .++|+.|+|++|++++ +|.. .+
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred ccc---ccccceEecCCCccCC-CCCCC---cccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---cc
Confidence 421 1356666666666663 44322 345556666666663 4432 2456677777777664 3332 24
Q ss_pred ccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecccccccccccccc
Q 043316 366 SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAF 433 (1031)
Q Consensus 366 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 433 (1031)
+|+.|++++|++++ +|... .+|+.|++++|+|+. +|..|.++++|+.|+|++|++.+..+..+
T Consensus 403 ~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt~-LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCEEEccCCcCCC-CCcch---hhhhhhhhccCcccc-cChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 56677777777764 44332 355667777777764 46667777777777777777766555444
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=252.01 Aligned_cols=335 Identities=20% Similarity=0.265 Sum_probs=224.1
Q ss_pred ccCCChHhHHHHHHHHHhCcCCCCCCCccCC----CCCCCCCCCCCCCCccce----------------eEeCCCCCEEE
Q 043316 21 VSSDSTKESYALLNWKTSLQNQNPNSSLLSS----WTLYPANATKISPCTWFG----------------IFCNLVGRVIS 80 (1031)
Q Consensus 21 ~~~~~~~~~~all~~k~~~~~~~~~~~~~~s----w~~~~~~~~~~~~C~w~g----------------v~c~~~~~v~~ 80 (1031)
.....++|.++++++.+.+.. | +.+++ |+ .++|+|.=.. |.|.. +.||.
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~--p--~~~~~~~~~~~------~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~-~~vt~ 125 (754)
T PRK15370 57 PETASPEEIKSKFECLRMLAF--P--AYADNIQYSRG------GADQYCILSENSQEILSIVFNTEGYTVEGGG-KSVTY 125 (754)
T ss_pred CCCCCHHHHHHHHHHHHHhcC--C--chhhccccccC------CCCcccccCCcchhhheeeecCCceEEecCC-Ccccc
Confidence 345678899999999999973 3 45666 97 6778995444 66744 45555
Q ss_pred EEecCCccccccCCccccCCCcc-cEEe----cCCCcCcCCCc---ccc-----ccCCcCcEeeCCCCcccCCCCccccc
Q 043316 81 ISLSSLGLNGTFQDFSFSSFPHL-MYLN----LSCNVLYGNIP---PQI-----SNLSKLRALDLGNNQLSGVIPQEIGH 147 (1031)
Q Consensus 81 l~l~~~~l~g~~~~~~~~~l~~l-~~L~----l~~n~~~~~~p---~~~-----~~l~~L~~L~l~~n~l~~~~p~~~~~ 147 (1031)
+...+...+.+-. .-..- .+.. -..+.-.+.-+ ..+ +-..+...|++++++++ .+|..+.
T Consensus 126 l~~~g~~~~~~~~-----~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip- 198 (754)
T PRK15370 126 TRVTESEQASSAS-----GSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP- 198 (754)
T ss_pred cccccccccccCC-----CCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc-
Confidence 5443322111110 00000 0000 00011110000 001 11245678888888887 5676653
Q ss_pred cccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccccccccccc
Q 043316 148 LTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILD 227 (1031)
Q Consensus 148 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 227 (1031)
++|+.|+|++|+++ .+|..+. ++|++|+|++|+++ .+|..+. .+|+.|+|++|++. .+|..+. ++|+.|+
T Consensus 199 -~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~ 268 (754)
T PRK15370 199 -EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLD 268 (754)
T ss_pred -cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEE
Confidence 47888888888888 6777664 47888888888887 6777654 47888888888887 6777654 4788888
Q ss_pred ccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCC
Q 043316 228 LSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 228 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
|++|+++ .+|..+. ++|+.|+|++|++++ +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.+++
T Consensus 269 Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~ 339 (754)
T PRK15370 269 LFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-ALPETLP--PGLKTLEAGENALTS 339 (754)
T ss_pred CcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-cCCcccc--ccceeccccCCcccc
Confidence 8888888 5777664 478888888888876 444443 47888888888887 4555443 678888888888884
Q ss_pred CCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCcccc---
Q 043316 308 SIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS--- 384 (1031)
Q Consensus 308 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--- 384 (1031)
+|..+. ++|+.|++++|+++ .+|..+. ++|++|+|++|+++.. |..+. .+|+.|++++|+++ .+|..
T Consensus 340 -LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~L-P~~l~--~sL~~LdLs~N~L~-~LP~sl~~ 409 (754)
T PRK15370 340 -LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTNL-PENLP--AALQIMQASRNNLV-RLPESLPH 409 (754)
T ss_pred -CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCCC-CHhHH--HHHHHHhhccCCcc-cCchhHHH
Confidence 665553 68888899998887 4666553 6899999999998854 54443 36889999999987 44543
Q ss_pred -ccCCCCCceEeccCcccC
Q 043316 385 -IGNLTKLVLVNMCENHLF 402 (1031)
Q Consensus 385 -~~~l~~L~~L~l~~N~l~ 402 (1031)
+..++++..+++.+|.+.
T Consensus 410 ~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 410 FRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HhhcCCCccEEEeeCCCcc
Confidence 344578889999999886
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-23 Score=246.40 Aligned_cols=267 Identities=30% Similarity=0.389 Sum_probs=198.5
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
.-..||+++|+++ .+|+.+. ++|+.|++++|+++ .+|.. +++|++|+|++|+++ .+|.. .++|+.|+|+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 3567788888887 6787775 37888888888887 56643 467888888888888 56754 3577888888
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCC
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 261 (1031)
+|.++ .+|..+ ++|+.|++++|+++ .+|.. +++|+.|+|++|++++ +|... .+|+.|++++|++++ +
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-c
Confidence 88887 566533 56778888888887 56652 4678888888888884 55432 357778888888875 4
Q ss_pred CccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccc
Q 043316 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLS 341 (1031)
Q Consensus 262 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 341 (1031)
|.. ..+|++|+|++|+|+ .+|.. .++|+.|++++|+|+ .+|... .+|+.|++++|++++ +|.. .+
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~-~LP~l~---~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLT-SLPALP---SGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred ccc---ccccceEecCCCccC-CCCCC---Ccccceehhhccccc-cCcccc---cccceEEecCCcccC-CCCc---cc
Confidence 432 247888888888888 45543 356778888888888 466543 468888899998885 5543 35
Q ss_pred cCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCC
Q 043316 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNL 412 (1031)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 412 (1031)
+|+.|++++|++++ +|.. ..+|+.|++++|+|+ .+|..+.++++|+.|++++|++++..+..+..+
T Consensus 403 ~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred CCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 78999999999986 4643 346788999999998 678889999999999999999998877776444
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-22 Score=240.66 Aligned_cols=257 Identities=24% Similarity=0.375 Sum_probs=201.1
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCcc
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQE 144 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 144 (1031)
+.|.-..|-. ..++.+++.+.+++. +|.. + .++|+.|+|++|+++ .+|..+. ++|++|+|++|+++ .+|..
T Consensus 168 a~~r~~~Cl~-~~~~~L~L~~~~Lts-LP~~-I--p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~ 238 (754)
T PRK15370 168 AVQRMRDCLK-NNKTELRLKILGLTT-IPAC-I--PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPAT 238 (754)
T ss_pred HHHHHHhhcc-cCceEEEeCCCCcCc-CCcc-c--ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChh
Confidence 3455556743 467889999988874 5542 2 257999999999998 6887665 58999999999998 67876
Q ss_pred ccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccc
Q 043316 145 IGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLS 224 (1031)
Q Consensus 145 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 224 (1031)
+. .+|+.|+|++|+++ .+|..+. ++|+.|+|++|+++ .+|..+. .+|++|++++|+++ .+|..+. ++|+
T Consensus 239 l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~ 307 (754)
T PRK15370 239 LP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGIT 307 (754)
T ss_pred hh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHH
Confidence 54 47999999999998 8888775 58999999999998 6888775 58999999999998 5676554 5799
Q ss_pred cccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCc
Q 043316 225 ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNS 304 (1031)
Q Consensus 225 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 304 (1031)
.|++++|+++ .+|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+++ .+|..+. ++|+.|+|++|+
T Consensus 308 ~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~ 378 (754)
T PRK15370 308 HLNVQSNSLT-ALPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNA 378 (754)
T ss_pred HHHhcCCccc-cCCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCc
Confidence 9999999998 5676554 689999999999986 565554 68999999999998 5676553 689999999999
Q ss_pred cCCCCCCCCCChhhhhhhhccccccCCCCcccc----cccccCceEEcccCCCc
Q 043316 305 LSGSIPPTQGNLEALSELGLYINQLDGVIPPSI----GNLSSLRTLYLYDNGFY 354 (1031)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l~~L~~L~L~~N~l~ 354 (1031)
|+ .+|..+. ..|+.|++++|++. .+|..+ +.++++..|++.+|.++
T Consensus 379 Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 379 LT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 98 4666543 47889999999988 455544 33467777888887775
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-22 Score=200.88 Aligned_cols=249 Identities=20% Similarity=0.313 Sum_probs=186.7
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
+.....+|.+...|+.|+|++ .|..+++|+++..... ..-..+|..|.-.++.+.||||+.++|+|.....+.++..
T Consensus 191 ~lnl~tkl~e~hsgelwrgrw-qgndivakil~vr~~t--~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRW-QGNDIVAKILNVREVT--ARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhhccCCCcccccccc-cCcchhhhhhhhhhcc--hhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence 344456788999999999999 5666777887665432 2234578889888999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCee-eCCCCCCCeeeCCCCceEEe--ccccccccC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIV-HGDISSKNVLLDSEHEAHVS--DFGIAKFLN 916 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv-H~Dlkp~NIll~~~~~~kl~--Dfg~a~~~~ 916 (1031)
||+.|+|...++.... -..+-.++.+++.+||+|++|||+.. +++ ---+..+.|++|++.+++|. |--++..
T Consensus 268 ~mp~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarismad~kfsfq-- 342 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ-- 342 (448)
T ss_pred eccchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheecccceeeee--
Confidence 9999999999987542 33566789999999999999999973 344 44688999999999987764 3222221
Q ss_pred CCCCCceeeccccCccccccccccCCC---ccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRAT---EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
. ....-.+.||+||.++.++.+ .+.|+|||++++||+-|...||.+....+-.+.-..+.+. ..+++.
T Consensus 343 -e----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglr----v~ippg 413 (448)
T KOG0195|consen 343 -E----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLR----VHIPPG 413 (448)
T ss_pred -c----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcccc----ccCCCC
Confidence 1 112236889999999876654 4789999999999999999998877664333333333333 333332
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
... .+.+++.-|+..||.+||.+..|+-.|||
T Consensus 414 is~------hm~klm~icmnedpgkrpkfdmivpilek 445 (448)
T KOG0195|consen 414 ISR------HMNKLMNICMNEDPGKRPKFDMIVPILEK 445 (448)
T ss_pred ccH------HHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence 222 23345556999999999999999988875
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=216.11 Aligned_cols=177 Identities=18% Similarity=0.198 Sum_probs=133.3
Q ss_pred HHHhccCccceeecCCCccEEEEEeC--CCcEEEEEEccchhh-hhhhhcHHHHHHHHHHHhcCCCCceee-eeeeEecC
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAELP--SGIIFAVKKFNSQLL-FDEMADQDEFLNEVLALTEIRHRNIIK-FHGFCSNA 831 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~~~Ei~~l~~l~h~niv~-l~~~~~~~ 831 (1031)
...++|...+.||+|+||+||+|... +++.||||++..... .......+.|.+|++++++++|+|++. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 34577999999999999999999653 577889998753211 011223567899999999999999985 4432
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCC-CCCCeeeCCCCceEEeccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDI-SSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~Dfg 910 (1031)
+..|+||||+++++|... ... . ...++.+++++|+|||+. ||+|||| ||+||+++.++.+||+|||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~~------~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RPH------G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Ccc------c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999632 110 1 146789999999999999 9999999 9999999999999999999
Q ss_pred cccccCCCCCC--------ceeeccccCccccccccccC------CCccccch
Q 043316 911 IAKFLNPHSSN--------WTAFAGTFGYAAPEIAHMMR------ATEKYDVH 949 (1031)
Q Consensus 911 ~a~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~------~~~~sDvw 949 (1031)
+|+.+...... .+...+++.|+|||.+...+ .+..+|-|
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 99977543311 12455778899999875432 23446666
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-22 Score=237.84 Aligned_cols=255 Identities=20% Similarity=0.216 Sum_probs=191.4
Q ss_pred ccceeecCCCccEEEE-EeCCCcEEEEEEccch--hhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 763 EKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQ--LLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~--~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
..+++|.|++|.|+.+ +......++.|.+... ....+......+..|+.+-..++|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4567999999988888 3344454555544311 111122222336778888889999999998888877766666699
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
|+++ +|..++... ..++..++..+++|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+..+..+.
T Consensus 402 ~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9999 999999875 2477789999999999999999999 99999999999999999999999999998765433
Q ss_pred C----CceeeccccCccccccccccCCCc-cccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 920 S----NWTAFAGTFGYAAPEIAHMMRATE-KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 920 ~----~~~~~~gt~~y~aPE~~~~~~~~~-~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
. .....+|+..|+|||++.+.+|.+ ..||||.|+++..|.+|+.||.........+..... ........++.
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~---~~~~~~~~~~~ 551 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY---SDQRNIFEGPN 551 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc---ccccccccChH
Confidence 2 245678999999999999988865 689999999999999999998866655443311110 00111111122
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.-..........++.+|++.||.+|.|+++|++
T Consensus 552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred HHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 223333446678899999999999999999986
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=209.10 Aligned_cols=255 Identities=22% Similarity=0.260 Sum_probs=184.7
Q ss_pred ccCccceeecCCCccEEEEEeCC--CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC----CCceeeeeeeE-ecCC
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPS--GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR----HRNIIKFHGFC-SNAQ 832 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~----h~niv~l~~~~-~~~~ 832 (1031)
+|.+.+.||+|+||.||.|.... ...+|+|......... .. .+..|+.++..+. .+++.++++.. ..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---Cc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 79999999999999999996544 3578888865532111 11 5667788877775 36899999999 5788
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-----CceEEe
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-----HEAHVS 907 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~ 907 (1031)
..++||+.. |.+|.++.+... .+.++..++.+|+.|++.+|+++|+. |++||||||.|+.+... ..+.+.
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEE
Confidence 889999977 779999886655 56799999999999999999999999 99999999999999865 359999
Q ss_pred cccccc--ccCCCCC--------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhh
Q 043316 908 DFGIAK--FLNPHSS--------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 908 Dfg~a~--~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~ 977 (1031)
|||+++ .+-.... ......||.+|+++.+..+.+.+.+.|+||++.++.|+..|..||......... ..
T Consensus 170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~-~~ 248 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK-SK 248 (322)
T ss_pred ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH-HH
Confidence 999998 3211111 123456999999999999999999999999999999999999998655532111 11
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
............... .... .+.++...+-..+..++|....+...++
T Consensus 249 ~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l~ 295 (322)
T KOG1164|consen 249 FEKDPRKLLTDRFGD---LKPE---EFAKILEYIDSLDYEDKPDYEKLAELLK 295 (322)
T ss_pred HHHHhhhhccccccC---CChH---HHHHHHHHhhccCCcCCCCHHHHHHHHH
Confidence 111111111110111 1112 2223333334468888998888776653
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-20 Score=208.68 Aligned_cols=259 Identities=27% Similarity=0.384 Sum_probs=198.0
Q ss_pred cCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCC-ceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR-NIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~-niv~l~~~~~~~~~~~lv~e 839 (1031)
|...+.+|.|+||.||++... ..+++|.+........ .....+.+|+.+++.+.|+ +++++++++......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS-KEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccch-hHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 567788999999999999765 8899999877653221 2477899999999999988 79999999988888899999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEeccccccccCCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 918 (1031)
++.++++.+++........+.......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.+......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 999999997776543112477889999999999999999999 999999999999999988 7999999999865443
Q ss_pred CC------CceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCcc--chhhhhhHHHhhhh-c
Q 043316 919 SS------NWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTN--FSSFSNMITEINQN-L 986 (1031)
Q Consensus 919 ~~------~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~--~~~~~~~~~~~~~~-~ 986 (1031)
.. ......++..|+|||.+.+ ..+...+|+||+|++++++++|..||...... .............. .
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence 32 2356789999999999987 57889999999999999999999996655431 11111111111110 0
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... ......+.+++..|+..+|..|.+..+...
T Consensus 236 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 236 ASPLSPSNP--ELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred ccccCcccc--chhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 111111000 122246778889999999999999887654
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.9e-20 Score=187.12 Aligned_cols=200 Identities=18% Similarity=0.270 Sum_probs=171.1
Q ss_pred hccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~l 836 (1031)
-.|.++++||+|+||.+|.| ..-+++.||||.-.... +.-+...|....+.+. .++|...|.+..++.+-.+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS------~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS------EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC------CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence 35899999999999999999 56789999999865433 3445667888877775 7899999999999988899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-----ceEEecccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-----EAHVSDFGI 911 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~Dfg~ 911 (1031)
|+|.. |-||+|+..-.+ .+++.+++..+|.|++.-++|+|++ ..|.|||||+|+||...+ .+.++|||+
T Consensus 102 VidLL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred hhhhh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 99988 679999987654 4699999999999999999999999 999999999999998544 389999999
Q ss_pred ccccCCCCCC-------ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCc
Q 043316 912 AKFLNPHSSN-------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVST 970 (1031)
Q Consensus 912 a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~ 970 (1031)
|+.+.++... .....||.+||+=-...|.+-+.+.|.=|+|-++.+++-|..||+....
T Consensus 176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred hhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 9987554332 2346799999999999999999999999999999999999999987654
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.4e-22 Score=184.85 Aligned_cols=167 Identities=34% Similarity=0.557 Sum_probs=104.8
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+.++++++.|-||+|.++ .+|+.|+.|.+|++|++++|+++ .+|.+|+.+++|+.|++.-|++. .+|..||.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 344555666666666665 55556666666666666666665 55555555555555555555554 4455555555555
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
.|||++|+++. ..+|..|..|+.|+.|+|+.|.+. .+|..+++|++|+.|.++.|.
T Consensus 106 vldltynnl~e-----------------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 106 VLDLTYNNLNE-----------------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred hhhcccccccc-----------------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCc
Confidence 55554444431 245666777777777777777777 677777777777777777777
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccC
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNL 292 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 292 (1031)
+-. +|..++.+..|++|++.+|+++ .+|..++++
T Consensus 162 ll~-lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 162 LLS-LPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred hhh-CcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 653 5777777777777777777777 556555543
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.4e-21 Score=220.65 Aligned_cols=247 Identities=19% Similarity=0.236 Sum_probs=180.8
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
+|...+.+|.+.|=.|.+|++.+|. |+||++-++...-......+-.+|++ ...++|||++.+.-+-..+...|+|.+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5667788999999999999988887 89999876543222223333344444 556689999999999888888999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC-C-
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-P- 917 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-~- 917 (1031)
|... +|.|.+...+ -+...+.+.|+.|++.|+..+|+. ||+|||||.+|||++.-..+.|+||..-+..- +
T Consensus 102 yvkh-nLyDRlSTRP---FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP---FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccch---HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9965 8999987654 356678889999999999999999 99999999999999999999999998765321 1
Q ss_pred -CCCCcee----eccccCcccccccccc----------C-CCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHH
Q 043316 918 -HSSNWTA----FAGTFGYAAPEIAHMM----------R-ATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 918 -~~~~~~~----~~gt~~y~aPE~~~~~----------~-~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 980 (1031)
....++. ...-.+|.|||.+... . .+++.||||+||+++|+++ |++||+... ...
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ--------L~a 246 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ--------LLA 246 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH--------HHh
Confidence 1122222 2334579999986431 1 4678999999999999999 677765221 110
Q ss_pred HhhhhcCCCCCCCChhHHHHH--HHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 981 EINQNLDHRLPTPSRDVMDKL--MSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~--~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
++.. . ...+....+++ ..+..++..|++.||++|-++++.++.
T Consensus 247 -Yr~~---~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 247 -YRSG---N-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred -Hhcc---C-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0000 0 00111111111 257788999999999999999999876
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=177.66 Aligned_cols=202 Identities=19% Similarity=0.283 Sum_probs=168.8
Q ss_pred HhccCccceeecCCCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~ 835 (1031)
..+|..+++||.|+||.+|.| ...+|..||+|.-.... ...+...|..+.+.++ ...|..+..+..+...-.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a------~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA------KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC------CCcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 467999999999999999999 56789999999865432 2345667888888886 467888888888999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceEEeccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIA 912 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a 912 (1031)
+||+.. |.+|++...-.. ..++.+++.-.+-|++.-++|+|.+ +++||||||+|+++.-+ ..+.++|||+|
T Consensus 88 lVMdLL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred eeeecc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccch
Confidence 999988 679999987543 4689999999999999999999999 99999999999999743 45899999999
Q ss_pred cccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 913 KFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 913 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
+.+.+... ......||.+|.+--...+.+-+.+.|+=|+|.++.++--|..||++....
T Consensus 162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 97754322 123467999999888877777888999999999999999999999877653
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-21 Score=179.79 Aligned_cols=162 Identities=31% Similarity=0.531 Sum_probs=133.1
Q ss_pred cceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccccccccccccc
Q 043316 150 CLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLS 229 (1031)
Q Consensus 150 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 229 (1031)
+.+.|.|++|+++ .+|+.|..|.+|+.|++++|+++ .+|.+++.|++|++|+++-|++. ..|..||.++.|+.|||+
T Consensus 34 ~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 34 NITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcc
Confidence 3333444444444 45555555556666666666665 77888888888888888888886 789999999999999999
Q ss_pred ccccc-cccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCC
Q 043316 230 QNQLR-GSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGS 308 (1031)
Q Consensus 230 ~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 308 (1031)
.|++. ..+|..|..|+.|+.|+|+.|.+. .+|..++++++|+.|.+..|.+- .+|..++.++.|++|.+.+|+++ .
T Consensus 111 ynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-v 187 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-V 187 (264)
T ss_pred ccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-e
Confidence 99986 578999999999999999999997 68889999999999999999998 89999999999999999999999 7
Q ss_pred CCCCCCChh
Q 043316 309 IPPTQGNLE 317 (1031)
Q Consensus 309 ~p~~~~~l~ 317 (1031)
+|+.++++.
T Consensus 188 lppel~~l~ 196 (264)
T KOG0617|consen 188 LPPELANLD 196 (264)
T ss_pred cChhhhhhh
Confidence 787776653
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.5e-20 Score=187.36 Aligned_cols=181 Identities=14% Similarity=0.171 Sum_probs=137.8
Q ss_pred cHHHHHHH--HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHH------HHHHHHHHhcCCCCce
Q 043316 750 LYEEIIKA--IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDE------FLNEVLALTEIRHRNI 821 (1031)
Q Consensus 750 ~~~~~~~~--~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~------~~~Ei~~l~~l~h~ni 821 (1031)
.|.++... ..+|...+++|.|+||.||.+.. +++.+|||.+....... +...+. +.+|++.+.+++||+|
T Consensus 20 ~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~-~~~~~~f~~g~~~e~Ea~~l~rL~~~GI 97 (232)
T PRK10359 20 KYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT-ERFLKSFVKGDYYENLIVQTDRVRSEGL 97 (232)
T ss_pred cHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCch-HHHHHhhhhhHHHHHHHHHHHHHHHCCC
Confidence 34555433 47899999999999999999866 67789999997654222 122222 6899999999999999
Q ss_pred eeeeeeEecC--------CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCC
Q 043316 822 IKFHGFCSNA--------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISS 893 (1031)
Q Consensus 822 v~l~~~~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 893 (1031)
..+.+++... +..++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||
T Consensus 98 ~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp 163 (232)
T PRK10359 98 ASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHK 163 (232)
T ss_pred CcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCCh
Confidence 9999886533 35799999999999988732 222 2456999999999999 999999999
Q ss_pred CCeeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHH
Q 043316 894 KNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959 (1031)
Q Consensus 894 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell 959 (1031)
+||+++.+| ++++|||........... ..+.....+..++|+|++|+.+....
T Consensus 164 ~Nili~~~g-i~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 164 GNFIVSKNG-LRIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred HHEEEeCCC-EEEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999988 999999988755321110 11333445667999999999987664
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-19 Score=183.17 Aligned_cols=144 Identities=17% Similarity=0.211 Sum_probs=109.4
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhh--------c--------------HHHHHHHHHHHhcCCCCce
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMA--------D--------------QDEFLNEVLALTEIRHRNI 821 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~--------~--------------~~~~~~Ei~~l~~l~h~ni 821 (1031)
...||+|++|.||+|...+|+.||||+++......... . .....+|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999999987799999999997643211100 0 1123459999999988776
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHh-hhCCCCCeeeCCCCCCCeeeCC
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
.....+... ..++||||++++++....... ..++..++..++.|++.+|+|+ |+. ||+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 444333222 238999999988776543222 3478899999999999999999 688 999999999999998
Q ss_pred CCceEEeccccccccC
Q 043316 901 EHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 901 ~~~~kl~Dfg~a~~~~ 916 (1031)
++.++|+|||+|...+
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 5789999999998653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-20 Score=207.77 Aligned_cols=226 Identities=25% Similarity=0.308 Sum_probs=177.1
Q ss_pred eecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEEEec
Q 043316 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
+|+|+||.|+.++. ..+..||+|+.++......... ....|..++...+ ||.+|++..+++.+...+++++|.
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~--~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT--HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc--ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 78999999998733 3578899999877655433222 5567778888887 999999999999999999999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 921 (1031)
.+|.+...+.... .+++.....+...++-+++++|+. +|+|||+|++||+++.+|++++.|||.++..-....
T Consensus 80 rgg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~- 152 (612)
T KOG0603|consen 80 RGGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI- 152 (612)
T ss_pred ccchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh-
Confidence 9999999887764 366777888899999999999999 999999999999999999999999999987543322
Q ss_pred ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHH
Q 043316 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL 1001 (1031)
Q Consensus 922 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1031)
.+||..|||||++. ....++|.||||++++||+||..||.. +....+.+. ... .+. ...
T Consensus 153 ---~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------~~~~~Il~~------~~~-~p~---~l~ 211 (612)
T KOG0603|consen 153 ---ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------DTMKRILKA------ELE-MPR---ELS 211 (612)
T ss_pred ---cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------HHHHHHhhh------ccC-Cch---hhh
Confidence 28899999999988 578899999999999999999999764 111111111 111 111 122
Q ss_pred HHHHHHHHhhccCCCCCCCCH
Q 043316 1002 MSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 1002 ~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
....+++..+...+|..|--.
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhcc
Confidence 345566677788888887643
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=190.88 Aligned_cols=236 Identities=19% Similarity=0.237 Sum_probs=153.2
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC----------CceeeeeeeE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH----------RNIIKFHGFC 828 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h----------~niv~l~~~~ 828 (1031)
.+..++.||.|+++.||.+.+ .+++.+|||++.... .....+.+++.+|.-....+.+ -.++-.++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 456778999999999999955 569999999986655 3344557778887766555422 2233333332
Q ss_pred ec---------C---C-----eeEEEEEeccCCCchhhccc---CC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCee
Q 043316 829 SN---------A---Q-----HSFIVSEYLDRGSLTTILKD---DA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIV 887 (1031)
Q Consensus 829 ~~---------~---~-----~~~lv~e~~~~gsL~~~l~~---~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 887 (1031)
.. . . ..+++|+-+ .++|.+++.. .. .........+..+..|+++.+++||+. |+|
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlV 167 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLV 167 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred EEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceE
Confidence 11 1 1 236678877 4688877642 11 112344556677889999999999999 999
Q ss_pred eCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccc--------cCCCccccchhhhHHHHHHH
Q 043316 888 HGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM--------MRATEKYDVHSFGVLALEVI 959 (1031)
Q Consensus 888 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~il~ell 959 (1031)
|+||+|+|++++.+|.++|+||+.....+.. ......+..|.+||.... -.++.+.|.|++|+++|.|+
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 9999999999999999999999988765431 121345678999997643 24688999999999999999
Q ss_pred hCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCC
Q 043316 960 KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR 1019 (1031)
Q Consensus 960 tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1019 (1031)
+|..||+.......... .+..+. +....+.++|..+++++|.+|
T Consensus 245 C~~lPf~~~~~~~~~~~------------~f~~C~----~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW------------DFSRCR----DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG------------GGTTSS-------HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc------------cchhcC----CcCHHHHHHHHHHccCCcccC
Confidence 99999875544211111 222232 222356778999999999988
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=173.96 Aligned_cols=185 Identities=13% Similarity=0.087 Sum_probs=139.2
Q ss_pred CccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEEEe
Q 043316 762 GEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
.+...|+.|+||+||.+.. .+++++.+.+..............+.+|++++++++ |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3456899999999998866 778888777765443222222336889999999995 5889999886 346999999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCC-CCCCeeeCCCCceEEeccccccccCCCC
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDI-SSKNVLLDSEHEAHVSDFGIAKFLNPHS 919 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~Dfg~a~~~~~~~ 919 (1031)
++|.+|...... ....++.|++++++++|+. ||+|||| ||+||+++.++.++|+|||+|....+..
T Consensus 80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999888654321 1134778999999999999 9999999 7999999999999999999998655433
Q ss_pred CC-------------ceeeccccCcccccccccc-CCC-ccccchhhhHHHHHHHhCCCC
Q 043316 920 SN-------------WTAFAGTFGYAAPEIAHMM-RAT-EKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 920 ~~-------------~~~~~gt~~y~aPE~~~~~-~~~-~~sDvwslG~il~elltG~~P 964 (1031)
.. ......++.|++|+...-- ..+ .+.+.++-|+-+|.++||..|
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~ 206 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVL 206 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCC
Confidence 21 0012257788888864321 233 456778999999999999988
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-18 Score=176.59 Aligned_cols=144 Identities=21% Similarity=0.245 Sum_probs=111.8
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhh----------------------hcHHHHHHHHHHHhcCCCCce
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEM----------------------ADQDEFLNEVLALTEIRHRNI 821 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----------------------~~~~~~~~Ei~~l~~l~h~ni 821 (1031)
...||+|++|.||+|...+|+.||||+++........ .....+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999997778999999998764211000 002234678999999999987
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhh-cccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeC
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTI-LKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~ 899 (1031)
.....+.... .++||||++++++... +.. .+++..++..++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 5555444332 4899999998855433 332 246778899999999999999999 8 999999999999998
Q ss_pred CCCceEEeccccccccCC
Q 043316 900 SEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~ 917 (1031)
++.++|+|||++.....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 89999999999987643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-18 Score=181.81 Aligned_cols=194 Identities=21% Similarity=0.279 Sum_probs=134.0
Q ss_pred CCCceeeeeeeEec---------------------------CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHH
Q 043316 817 RHRNIIKFHGFCSN---------------------------AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869 (1031)
Q Consensus 817 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 869 (1031)
+|||||++.++|.+ +...|+||...+. +|..|+.... .+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence 69999999987743 2357899988864 8988887543 45567778999
Q ss_pred HHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC--CC--ceEEeccccccccCCC------CCCceeeccccCccccccccc
Q 043316 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDS--EH--EAHVSDFGIAKFLNPH------SSNWTAFAGTFGYAAPEIAHM 939 (1031)
Q Consensus 870 ~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~--~~kl~Dfg~a~~~~~~------~~~~~~~~gt~~y~aPE~~~~ 939 (1031)
|+++|+.|||.+ ||.|||+|.+||++.- |+ ...|+|||++-.-+.. .+......|...-||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 9999999999999953 33 4889999988643221 111233457788999998764
Q ss_pred cCC------CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhcc
Q 043316 940 MRA------TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLV 1013 (1031)
Q Consensus 940 ~~~------~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 1013 (1031)
.+- -.|+|.|+.|.+.||+++...||=......-+.....+. .-+..+.. ....+.+++...++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~----qLPalp~~------vpp~~rqlV~~lL~ 495 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES----QLPALPSR------VPPVARQLVFDLLK 495 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh----hCCCCccc------CChHHHHHHHHHhc
Confidence 321 348999999999999999999964322211111111111 11111111 11245667778899
Q ss_pred CCCCCCCCHHHHHHH
Q 043316 1014 ESPEARPTMKKVCNL 1028 (1031)
Q Consensus 1014 ~dP~~Rps~~evl~~ 1028 (1031)
.||.+|++..-....
T Consensus 496 r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANV 510 (598)
T ss_pred CCccccCCccHHHhH
Confidence 999999987654443
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-18 Score=193.34 Aligned_cols=212 Identities=25% Similarity=0.436 Sum_probs=160.2
Q ss_pred HhcCCCCceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCe-eeCCC
Q 043316 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI-VHGDI 891 (1031)
Q Consensus 813 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i-vH~Dl 891 (1031)
++.+.|.|+.+++|.+.++...+.|.+|+..|+|+|.+.... ..+++.....+.++|+.||+|+|+. .| +|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 356789999999999999999999999999999999998743 4578889999999999999999998 55 89999
Q ss_pred CCCCeeeCCCCceEEeccccccccCCC--CCCceeeccccCcccccccccc-------CCCccccchhhhHHHHHHHhCC
Q 043316 892 SSKNVLLDSEHEAHVSDFGIAKFLNPH--SSNWTAFAGTFGYAAPEIAHMM-------RATEKYDVHSFGVLALEVIKGN 962 (1031)
Q Consensus 892 kp~NIll~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwslG~il~elltG~ 962 (1031)
+++|.++|....+|++|||+....... ........-..-|.|||.+.+. ..+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999999876421 1111222345679999998763 1467899999999999999999
Q ss_pred CCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 963 HPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 963 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.||+........ ...+..+.......+.+......+....+..++..||..+|.+||++++|-..++
T Consensus 156 ~~~~~~~~~~~~-~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 156 GPFDLRNLVEDP-DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred CccccccccCCh-HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 999865544332 2222222221111111111111122235888999999999999999999987764
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.2e-21 Score=213.84 Aligned_cols=271 Identities=23% Similarity=0.227 Sum_probs=127.1
Q ss_pred EecCCCcCc-CCCccccccCCcCcEeeCCCCcccCC----CCccccccccceEEEeeccccCC------CCCccccCccc
Q 043316 106 LNLSCNVLY-GNIPPQISNLSKLRALDLGNNQLSGV----IPQEIGHLTCLRMLYFDVNHLHG------SIPLEIGKLSL 174 (1031)
Q Consensus 106 L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~n~l~~------~~p~~~~~l~~ 174 (1031)
|+|.++.++ +..+..+..+..|++|+++++.++.. ++..+...++|++|+++.+.+.+ .++..++.+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 344444443 23333344444455555555554321 33334444445555555544431 12233444555
Q ss_pred CceeeccCcccCCCCCCccccccc---ccEEEeccccccc----ccCcccccc-cccccccccccccccc----cCcccc
Q 043316 175 INVLTLCHNNFSGRIPPSLGNLSN---LAYLYLNNNSLFG----SIPNVMGNL-NSLSILDLSQNQLRGS----IPFSLA 242 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~~~~~l~~---L~~L~l~~n~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~~l~ 242 (1031)
|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 162 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR 162 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHH
Confidence 555555555555444444444443 5555555555542 122233344 4555555555555421 222344
Q ss_pred ccCcccEEEeecCcCCCC----CCcccccccccccccccccccccc----CCcccccCCCCCeeeeccCccCCCCCCCCC
Q 043316 243 NLSNLGILYLYKNSLFGF----IPSVIGNLKSLFELDLSENQLFGS----IPLSFSNLSSLTLMSLFNNSLSGSIPPTQG 314 (1031)
Q Consensus 243 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 314 (1031)
.+++|++|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~------- 235 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD------- 235 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch-------
Confidence 444555555555555421 112223334555555555555422 12233444555555555555442
Q ss_pred ChhhhhhhhccccccCCCCccccc-----ccccCceEEcccCCCcC----ccCCccCcccccceEEccccccCCC----c
Q 043316 315 NLEALSELGLYINQLDGVIPPSIG-----NLSSLRTLYLYDNGFYG----LVPNEIGYLKSLSKLELCRNHLSGV----I 381 (1031)
Q Consensus 315 ~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~ 381 (1031)
.....+. ..+.|++|++++|.++. .+...+..+++|+++++++|.++.. .
T Consensus 236 -----------------~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~ 298 (319)
T cd00116 236 -----------------AGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLL 298 (319)
T ss_pred -----------------HHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHH
Confidence 1111111 13567777777776651 2223344556677777777777643 2
Q ss_pred cccccCC-CCCceEeccCcc
Q 043316 382 PHSIGNL-TKLVLVNMCENH 400 (1031)
Q Consensus 382 p~~~~~l-~~L~~L~l~~N~ 400 (1031)
...+... +.|+++++.+|.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 299 AESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHhhcCCchhhcccCCCC
Confidence 3333334 567777766664
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.3e-21 Score=212.39 Aligned_cols=276 Identities=22% Similarity=0.256 Sum_probs=182.4
Q ss_pred EeeCCCCccc-CCCCccccccccceEEEeeccccCC----CCCccccCcccCceeeccCcccCC------CCCCcccccc
Q 043316 129 ALDLGNNQLS-GVIPQEIGHLTCLRMLYFDVNHLHG----SIPLEIGKLSLINVLTLCHNNFSG------RIPPSLGNLS 197 (1031)
Q Consensus 129 ~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~------~ip~~~~~l~ 197 (1031)
.|+|+.+.++ +..+..+..+.+|++|+++++.++. .++..+...+.|++|+++++.+.+ .++..+.+++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5788888887 3456667778889999999988853 256666777788888888887762 2334566677
Q ss_pred cccEEEecccccccccCcccccccc---ccccccccccccc----ccCcccccc-CcccEEEeecCcCCCC----CCccc
Q 043316 198 NLAYLYLNNNSLFGSIPNVMGNLNS---LSILDLSQNQLRG----SIPFSLANL-SNLGILYLYKNSLFGF----IPSVI 265 (1031)
Q Consensus 198 ~L~~L~l~~n~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~l~~l-~~L~~L~L~~N~l~~~----~p~~~ 265 (1031)
+|++|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8888888887776555555555555 7777777777662 223344555 6667777777766632 22234
Q ss_pred ccccccccccccccccccc----CCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccc
Q 043316 266 GNLKSLFELDLSENQLFGS----IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLS 341 (1031)
Q Consensus 266 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 341 (1031)
..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++... +.++..+..++
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~--------------------~~l~~~~~~~~ 221 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA--------------------SALAETLASLK 221 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH--------------------HHHHHHhcccC
Confidence 4455566666666665531 22233344455555555555542100 12334566788
Q ss_pred cCceEEcccCCCcCccCCccC-----cccccceEEccccccCC----CccccccCCCCCceEeccCcccCCc----Cchh
Q 043316 342 SLRTLYLYDNGFYGLVPNEIG-----YLKSLSKLELCRNHLSG----VIPHSIGNLTKLVLVNMCENHLFGL----IPKS 408 (1031)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~~~~ 408 (1031)
+|++|++++|.+++.....+. ..+.|++|++++|.++. .+...+..+++|+++++++|.+... ....
T Consensus 222 ~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~ 301 (319)
T cd00116 222 SLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAES 301 (319)
T ss_pred CCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHH
Confidence 999999999999864333332 23799999999999972 2345667779999999999999965 3444
Q ss_pred ccCC-ccccceeccccc
Q 043316 409 FRNL-TSLERLRFNQNN 424 (1031)
Q Consensus 409 ~~~l-~~L~~L~L~~N~ 424 (1031)
+... ..|+++++.+|.
T Consensus 302 ~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 302 LLEPGNELESLWVKDDS 318 (319)
T ss_pred HhhcCCchhhcccCCCC
Confidence 5555 689999988875
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-17 Score=197.87 Aligned_cols=196 Identities=22% Similarity=0.246 Sum_probs=159.5
Q ss_pred HHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC---CCceeeeeeeEecCC
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~~~~~~~~ 832 (1031)
.....|.+.+.+|+|+||+||.|...+|+.||+|+=+.....+ |.==.+++.+++ -+.|+.+..++.-.+
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE-------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE-------FYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee-------eeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 3456788999999999999999987789999999866544322 111123344444 245666666666677
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-------CCceE
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-------EHEAH 905 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------~~~~k 905 (1031)
..++|+||.+.|+|.+++... +-+++.-++.+..|+++.+++||+. +||||||||+|+++.. ...++
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~---~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTN---KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred cceeeeeccccccHHHhhccC---CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceE
Confidence 789999999999999999843 4588999999999999999999999 9999999999999952 23599
Q ss_pred EeccccccccC--CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCC
Q 043316 906 VSDFGIAKFLN--PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 906 l~Dfg~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P 964 (1031)
|+|||.+..+. ++.......++|-.+--+|+..|..++.++|-|.++.+++-|++|++-
T Consensus 842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99999998664 334456778899999999999999999999999999999999999854
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.7e-17 Score=166.89 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=105.6
Q ss_pred cCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-----CCCceeeeeeeEecCC---
Q 043316 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-----RHRNIIKFHGFCSNAQ--- 832 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~niv~l~~~~~~~~--- 832 (1031)
+...+.||+|+||.||. .-.++.. +||++.... ....+.+.+|+.+++.+ +||||++++|+++++.
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~----~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRG----DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccc----cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 44567899999999996 3334444 799886532 12456789999999999 5799999999998863
Q ss_pred eeE-EEEEe--ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHH-HHhhhCCCCCeeeCCCCCCCeeeCCC----Cce
Q 043316 833 HSF-IVSEY--LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL-SYLHHDCLPPIVHGDISSKNVLLDSE----HEA 904 (1031)
Q Consensus 833 ~~~-lv~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~ 904 (1031)
..+ +|+|| +.+++|.+++++. .+++. ..++.+++.++ +|||++ +|+||||||+||+++.. +.+
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcE
Confidence 434 78999 5579999999763 24444 35678888777 999999 99999999999999743 379
Q ss_pred EEeccccc
Q 043316 905 HVSDFGIA 912 (1031)
Q Consensus 905 kl~Dfg~a 912 (1031)
+|+||+-+
T Consensus 149 ~LiDg~G~ 156 (210)
T PRK10345 149 VVCDNIGE 156 (210)
T ss_pred EEEECCCC
Confidence 99995433
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-18 Score=185.70 Aligned_cols=174 Identities=20% Similarity=0.357 Sum_probs=134.7
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
.+.|+.|+++...+|++|+.+.....+.++.....++.|++.|++| + +.+|||+||.||+...+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 4578999999999999999877767778899999999999999999 6 899999999999999999999999999
Q ss_pred ccccCCCC------CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhh
Q 043316 912 AKFLNPHS------SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984 (1031)
Q Consensus 912 a~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 984 (1031)
........ ...+..+||..||+||.+.+..|+.|+||||+|++++|++. =..+++ .......
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-----------r~~t~~d 471 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-----------RIATLTD 471 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-----------HHHhhhh
Confidence 98775443 13456789999999999999999999999999999999997 222211 1111122
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 043316 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025 (1031)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 1025 (1031)
..+..+++ ........-..++.+++.+.|.+||++.++
T Consensus 472 ~r~g~ip~---~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 472 IRDGIIPP---EFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhcCCCCh---HHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 22223331 111111233467788999999999965554
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-16 Score=167.47 Aligned_cols=148 Identities=20% Similarity=0.202 Sum_probs=113.3
Q ss_pred HhccCccceeecCCCccEEEEE--eCCCcEEEEEEccchhhhhh--------------------hhcHHHHHHHHHHHhc
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE--LPSGIIFAVKKFNSQLLFDE--------------------MADQDEFLNEVLALTE 815 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~~~Ei~~l~~ 815 (1031)
..-|.+.+.||+|++|.||+|. ..+|+.||||+++....... ......+.+|+..+.+
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3457889999999999999997 56899999999865321000 0011345789999999
Q ss_pred CCCC--ceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC-eeeCCCC
Q 043316 816 IRHR--NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP-IVHGDIS 892 (1031)
Q Consensus 816 l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk 892 (1031)
+.+. .+.+++++ ...++||||++++++..+..... .....++..++.|++.++++||+. | |+|||||
T Consensus 107 L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dik 176 (237)
T smart00090 107 LYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLS 176 (237)
T ss_pred HHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCC
Confidence 9753 34444443 23489999999988876653222 345566789999999999999999 9 9999999
Q ss_pred CCCeeeCCCCceEEeccccccccC
Q 043316 893 SKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 893 p~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|+||+++ ++.++|+|||.+...+
T Consensus 177 p~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 177 EYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhhEEEE-CCCEEEEEChhhhccC
Confidence 9999999 8899999999988654
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-16 Score=191.17 Aligned_cols=157 Identities=32% Similarity=0.522 Sum_probs=97.5
Q ss_pred ccCCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCC-----ccceeEeCCCCCEEEEEecCCccccccCCc
Q 043316 21 VSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPC-----TWFGIFCNLVGRVISISLSSLGLNGTFQDF 95 (1031)
Q Consensus 21 ~~~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C-----~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~ 95 (1031)
..++.+.|..||+++|+++. ++. ..+|+ + |+| .|.||+|+.... +
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~--~~~---~~~W~-------g-~~C~p~~~~w~Gv~C~~~~~-~---------------- 415 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLG--LPL---RFGWN-------G-DPCVPQQHPWSGADCQFDST-K---------------- 415 (623)
T ss_pred ccccCchHHHHHHHHHHhcC--Ccc---cCCCC-------C-CCCCCcccccccceeeccCC-C----------------
Confidence 34567889999999999986 331 24896 3 344 799999953210 0
Q ss_pred cccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccC
Q 043316 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLI 175 (1031)
Q Consensus 96 ~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 175 (1031)
....++.|+|++|.+.|.+|++++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++++++|
T Consensus 416 ---~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L 492 (623)
T PLN03150 416 ---GKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSL 492 (623)
T ss_pred ---CceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCC
Confidence 00123444555555555666666666666666666666666666666666666666666666666666666666666
Q ss_pred ceeeccCcccCCCCCCccccc-ccccEEEecccccc
Q 043316 176 NVLTLCHNNFSGRIPPSLGNL-SNLAYLYLNNNSLF 210 (1031)
Q Consensus 176 ~~L~L~~n~l~~~ip~~~~~l-~~L~~L~l~~n~l~ 210 (1031)
++|+|++|.++|.+|..++.+ .++..+++.+|...
T Consensus 493 ~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 493 RILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CEEECcCCcccccCChHHhhccccCceEEecCCccc
Confidence 666666666666666666543 35566666666543
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.4e-16 Score=159.24 Aligned_cols=147 Identities=20% Similarity=0.210 Sum_probs=112.6
Q ss_pred HHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhh-hhh-----------------hcHHHHHHHHHHHhc
Q 043316 754 IIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLF-DEM-----------------ADQDEFLNEVLALTE 815 (1031)
Q Consensus 754 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~-----------------~~~~~~~~Ei~~l~~ 815 (1031)
+.+....|.+.+.||+|+||.||+|...+|+.||||++...... ... .....+.+|+..+..
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 33333447788999999999999998888999999987543210 000 012246788888988
Q ss_pred CCCC--ceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCC
Q 043316 816 IRHR--NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISS 893 (1031)
Q Consensus 816 l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 893 (1031)
+.|+ .+++.++. ...++||||+++++|.+.... .....++.+++.++.++|+. ||+||||||
T Consensus 90 l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p 153 (198)
T cd05144 90 LYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDLSE 153 (198)
T ss_pred HHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCc
Confidence 8777 44444442 445899999999998765431 23567889999999999998 999999999
Q ss_pred CCeeeCCCCceEEeccccccccC
Q 043316 894 KNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 894 ~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
+||+++.++.++|+|||++....
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999997654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.5e-16 Score=161.31 Aligned_cols=138 Identities=20% Similarity=0.384 Sum_probs=115.7
Q ss_pred ceeecCCCccEEEEEeCCCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEe
Q 043316 765 YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
+.||+|++|.||+|.. .+..+++|+....... +.......+.+|+.++..++|+++.....++.+....++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4689999999999987 7788999986543221 1112235688999999999999988888887777888999999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++|++|.+++.... . ++..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986432 1 7889999999999999999 999999999999999 88999999999875
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-16 Score=186.89 Aligned_cols=207 Identities=25% Similarity=0.280 Sum_probs=140.4
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+|..++.+..|+||.||.++++ +.+.+|+| ++++.. +.|- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l---------ilRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL---------ILRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccch---------hhhc--cccccCCccee---------------
Confidence 67889999999999999999665 56788884 444321 1111 33333444444
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|+-.+.++..+ .++. +++.+++|+|+. ||||||+||+|.+|+.-|++|++|||+++..-.
T Consensus 136 ------gDc~tllk~~g---~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 ------GDCATLLKNIG---PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred ------chhhhhcccCC---CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 44444454432 1222 227899999999 999999999999999999999999999974321
Q ss_pred CCC---------------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh
Q 043316 918 HSS---------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 918 ~~~---------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
... .....+||+.|+|||++....|+..+|.|++|+|+||++.|+.||..... +..+...+...
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp-eelfg~visd~ 274 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-EELFGQVISDD 274 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH-HHHHhhhhhhh
Confidence 100 01235799999999999999999999999999999999999999764432 12222222221
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCC
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 1021 (1031)
.. ++....+ ...+..+++.+.++.+|..|--
T Consensus 275 i~-wpE~dea-------~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 275 IE-WPEEDEA-------LPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred cc-ccccCcC-------CCHHHHHHHHHHHHhChHhhcc
Confidence 11 1111111 1225567777889999999853
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.4e-16 Score=158.91 Aligned_cols=134 Identities=22% Similarity=0.420 Sum_probs=109.0
Q ss_pred eecCCCccEEEEEeCCCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEecc
Q 043316 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
||+|++|.||+|.. +++.+++|+....... +.......+.+|++++..++|+++.....++......++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 79999999999985 6789999986543211 112234667899999999998876665556666677799999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
|++|.+++..... .++.+++.+++++|+. |++|||++|+||+++ ++.++++|||.+...
T Consensus 81 g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 81 GKPLKDVIEEGND----------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CccHHHHHhhcHH----------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999988754311 7899999999999999 999999999999999 899999999998763
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.3e-15 Score=178.04 Aligned_cols=141 Identities=23% Similarity=0.324 Sum_probs=113.0
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEc-cchhhh---hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKF-NSQLLF---DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~~~~---~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
..|...+.||+|+||+||+|.+... .+++|+. .+.... +.....+.+.+|++++++++|++++..+.++.+....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 3456678999999999999977443 3444432 221111 1122346788999999999999999888888777788
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++. ....++.+++++++|||+. +++|||+||+||++ .++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999988875 3467899999999999999 99999999999999 678999999999986
Q ss_pred c
Q 043316 915 L 915 (1031)
Q Consensus 915 ~ 915 (1031)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 4
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-15 Score=180.22 Aligned_cols=254 Identities=20% Similarity=0.254 Sum_probs=189.6
Q ss_pred hccCccceeecCCCccEEEEEe--CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL--PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~ 835 (1031)
..|...+.||+|+|+.|-.+.. .....+|+|.+.... ......+....|..+-+.+. |+|++.+++........+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 3466777799999999998854 345567777765543 22233445556788877776 999999999999999999
Q ss_pred EEEEeccCCCchhhc-ccCCccccCCHHHHHHHHHHHHHHHHHhh-hCCCCCeeeCCCCCCCeeeCCCC-ceEEeccccc
Q 043316 836 IVSEYLDRGSLTTIL-KDDAAAKEFGWNQRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIA 912 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a 912 (1031)
++++|.+++++.+-+ .... ...+......++.|+..++.|+| +. +++|||+||+|.+++..+ ..+++|||+|
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred cccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhh
Confidence 999999999999888 4332 12445667789999999999999 77 999999999999999999 9999999999
Q ss_pred cccCC-CCC--Cceeecc-ccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC
Q 043316 913 KFLNP-HSS--NWTAFAG-TFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987 (1031)
Q Consensus 913 ~~~~~-~~~--~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 987 (1031)
..+.. .+. ......| ++.|+|||...+. ...+..|+||.|+++..+++|..|++........+......-..
T Consensus 173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--- 249 (601)
T KOG0590|consen 173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGR--- 249 (601)
T ss_pred ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccc---
Confidence 87755 222 2344567 9999999998874 45778999999999999999999988776654333332221100
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 043316 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVC 1026 (1031)
Q Consensus 988 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 1026 (1031)
..... +........+++.+++..+|..|.+.+++.
T Consensus 250 ~~~~~----~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 250 FTQLP----WNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred cccCc----cccCChhhhhcccccccCCchhcccccccc
Confidence 00010 111122455667788889999999988764
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-14 Score=146.21 Aligned_cols=140 Identities=21% Similarity=0.219 Sum_probs=98.9
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcH--------------------HHHHHHHHHHhcCCCC--ce
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQ--------------------DEFLNEVLALTEIRHR--NI 821 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~--------------------~~~~~Ei~~l~~l~h~--ni 821 (1031)
.+.||+|+||.||+|...+++.||||++............ .....|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999998778999999998653221110000 0113455555555433 24
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhh-cccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeC
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTI-LKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~ 899 (1031)
.+.+++ ...++||||++++.+... +.... .. .++..++.+++.++.++|. . +|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444443 235899999999654321 11111 01 5678899999999999999 7 999999999999999
Q ss_pred CCCceEEeccccccccC
Q 043316 900 SEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~ 916 (1031)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 9999999999998654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3e-16 Score=171.52 Aligned_cols=174 Identities=30% Similarity=0.509 Sum_probs=89.3
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
++.-...||+.|++. ++|.++..+..|..|.|.+|.+. .||..+++|..|.+|||+.|+++ .+|..++.|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 334444555555554 55555555555555555555554 44555555555555555555554 4555555443 44555
Q ss_pred ccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCC
Q 043316 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 180 L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
+++|+++ .+|+.++.+..|.+||.+.|.+. .+|..++++.+|+.|.++.|++. .+|..+
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El------------------ 208 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEEL------------------ 208 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHH------------------
Confidence 5555544 44444554445555555555444 44444444445554444444444 344444
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
+.| .|..||+|.|+++ .+|..|.+|+.|++|-|.+|.+.
T Consensus 209 ------~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 209 ------CSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred ------hCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 332 2555555555555 55555666666666666666555
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.3e-14 Score=137.67 Aligned_cols=136 Identities=18% Similarity=0.222 Sum_probs=114.2
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC--CceeeeeeeEecCCeeEEEEEe
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH--RNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
+.+.+|+|.++.||++...+ ..+++|....... ...+.+|+..++.++| +.+++++++....+..++++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35679999999999998744 7899999865431 4568899999999976 5899999998888889999999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
++++.+..+ +......++.+++++++++|.....+++|+|++|+||+++..+.++++|||.+...
T Consensus 75 ~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 75 IEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 998877654 33566778999999999999864447999999999999999899999999998753
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.7e-14 Score=147.04 Aligned_cols=140 Identities=14% Similarity=0.269 Sum_probs=108.3
Q ss_pred cceee-cCCCccEEEEEeCCCcEEEEEEccchhh-----hh----hhhcHHHHHHHHHHHhcCCCCce--eeeeeeEecC
Q 043316 764 KYCIG-KGRQGSVYKAELPSGIIFAVKKFNSQLL-----FD----EMADQDEFLNEVLALTEIRHRNI--IKFHGFCSNA 831 (1031)
Q Consensus 764 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~----~~~~~~~~~~Ei~~l~~l~h~ni--v~l~~~~~~~ 831 (1031)
...|| .|+.|+||.++. .++.++||++..... .+ .......+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45688 899999999987 478899998865322 11 11234678899999999998774 6777765432
Q ss_pred -C---eeEEEEEeccC-CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 832 -Q---HSFIVSEYLDR-GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 832 -~---~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
+ ..++|+|++++ .+|.+++... +++.. .+.+++.++.+||+. ||+||||||.||+++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 6898887643 23333 367899999999999 9999999999999999999999
Q ss_pred ecccccccc
Q 043316 907 SDFGIAKFL 915 (1031)
Q Consensus 907 ~Dfg~a~~~ 915 (1031)
+|||.+...
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999988753
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.2e-16 Score=168.54 Aligned_cols=190 Identities=28% Similarity=0.397 Sum_probs=124.6
Q ss_pred EEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccc
Q 043316 153 MLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQ 232 (1031)
Q Consensus 153 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 232 (1031)
..||+.|++. ++|.+++.+-.|+.|.|.+|.+. .||..+.+|..|++|||+.|+++ .+|..+..|+ |+.|-+++|+
T Consensus 79 ~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNk 154 (722)
T KOG0532|consen 79 FADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNK 154 (722)
T ss_pred hhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCc
Confidence 3344444444 44444444444444555555444 55555555555555555555554 4454444443 5555566666
Q ss_pred cccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCC
Q 043316 233 LRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPT 312 (1031)
Q Consensus 233 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 312 (1031)
++ .+|..++.+..|..||.+.|.+.. +|..++++.+|+.|.+..|++. .+|..+..| .|..||+++|+++ .+|..
T Consensus 155 l~-~lp~~ig~~~tl~~ld~s~nei~s-lpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~ 229 (722)
T KOG0532|consen 155 LT-SLPEEIGLLPTLAHLDVSKNEIQS-LPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVD 229 (722)
T ss_pred cc-cCCcccccchhHHHhhhhhhhhhh-chHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchh
Confidence 55 556566655666666666666653 5667788888888888888887 677777754 5899999999999 89999
Q ss_pred CCChhhhhhhhccccccCCCCccccccccc---CceEEcccCC
Q 043316 313 QGNLEALSELGLYINQLDGVIPPSIGNLSS---LRTLYLYDNG 352 (1031)
Q Consensus 313 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~ 352 (1031)
|.+|+.|++|.|.+|.++ ..|..++..-. .++|+..-++
T Consensus 230 fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 230 FRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred hhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 999999999999999999 45766654333 3455555553
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-14 Score=165.94 Aligned_cols=261 Identities=36% Similarity=0.423 Sum_probs=191.6
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccc-cceEEEeeccccCCCCCccccCcccCceeeccCc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLT-CLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1031)
.|+++.|.+...+ ..+..++.++.|++.+|.++ .+|...+.+. +|+.|++++|++. .+|..++.++.|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5778888775333 34666788999999999998 7888888885 9999999999998 78888899999999999999
Q ss_pred ccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCc
Q 043316 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPS 263 (1031)
Q Consensus 184 ~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 263 (1031)
+++ .+|...+.+++|+.|++++|+++ .+|..++.+..|++|++++|++. ..+..+.+++++..|.+.+|++.. ++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccc
Confidence 998 88888878999999999999998 78887777788999999999655 577788889999999999998874 367
Q ss_pred cccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccC
Q 043316 264 VIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSL 343 (1031)
Q Consensus 264 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 343 (1031)
.++.+++|+.|++++|+++ .++. ++.+.+|+.|++++|.++..+|...........+. . +.+. ..+........+
T Consensus 250 ~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~ 324 (394)
T COG4886 250 SIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIALLLLLLELLL-N-LLLT-LKALELKLNSIL 324 (394)
T ss_pred hhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhhhccchhHHhhh-h-hhhh-cccccccccccc
Confidence 8888999999999999998 4444 88999999999999999876665544332222222 2 2222 122223333334
Q ss_pred ceEEcccCCCcCccCCccCcccccceEEccccccC
Q 043316 344 RTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378 (1031)
Q Consensus 344 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 378 (1031)
....+..+... ..+..+.....+..++...+...
T Consensus 325 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 358 (394)
T COG4886 325 LNNNILSNGET-SSPEALSILESLNNLWTLDNALD 358 (394)
T ss_pred ccccccccccc-ccchhhcccccccCceecccccc
Confidence 44444444443 23444455555566666555544
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-14 Score=164.22 Aligned_cols=262 Identities=34% Similarity=0.381 Sum_probs=199.3
Q ss_pred cEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcc-cCceeeccCcccCCCCCCcccccccccEEEecc
Q 043316 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLS-LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNN 206 (1031)
Q Consensus 128 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~ 206 (1031)
..|+++.|.+. ..+..+..++.++.|++.+|.++ .+|...+.++ +|+.|++++|++. .+|..++.+++|+.|++++
T Consensus 96 ~~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 46899988885 33456677789999999999999 8999999995 9999999999998 8888899999999999999
Q ss_pred cccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCC
Q 043316 207 NSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIP 286 (1031)
Q Consensus 207 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 286 (1031)
|+++ .+|...+.+++|+.|++++|+++ .+|..+..+..|++|.+++|.+. ..+..+.+++++..|.+++|++. .++
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 9998 78887778999999999999999 78887777788999999999643 35677899999999999999987 447
Q ss_pred cccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccc
Q 043316 287 LSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS 366 (1031)
Q Consensus 287 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 366 (1031)
..++.+++++.|++++|+++ .++. ++.+.+|+.|++++|.+....|....... ....... +.++. .+........
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~ 323 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIALLLL-LLELLLN-LLLTL-KALELKLNSI 323 (394)
T ss_pred chhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhhhccch-hHHhhhh-hhhhc-cccccccccc
Confidence 78899999999999999998 4444 89999999999999999977666544322 2222222 22221 1222333333
Q ss_pred cceEEccccccCCCccccccCCCCCceEeccCcccC
Q 043316 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLF 402 (1031)
Q Consensus 367 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 402 (1031)
+....+..+... ..+..+.....+..++...+...
T Consensus 324 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 358 (394)
T COG4886 324 LLNNNILSNGET-SSPEALSILESLNNLWTLDNALD 358 (394)
T ss_pred cccccccccccc-ccchhhcccccccCceecccccc
Confidence 444444554443 34555555555555555555443
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.9e-13 Score=162.89 Aligned_cols=106 Identities=29% Similarity=0.438 Sum_probs=63.4
Q ss_pred cceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCC
Q 043316 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSH 614 (1031)
Q Consensus 535 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 614 (1031)
++.|+|++|.+++.+|..+..+++|++|+|++|++++.+|..+..+++|+.|||++|++++.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 55566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CccCCCCccccccC-CcceEEeccccc
Q 043316 615 NNLFDLIPGCFEEM-RSLSRIDIAYNE 640 (1031)
Q Consensus 615 N~l~~~~~~~~~~l-~~L~~L~l~~N~ 640 (1031)
|++++.+|..+..+ .++..+++.+|+
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCc
Confidence 66666666555432 233444444443
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.2e-13 Score=148.13 Aligned_cols=248 Identities=27% Similarity=0.282 Sum_probs=179.4
Q ss_pred ccCccceeec--CCCccEEEEEe---CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCe
Q 043316 760 DFGEKYCIGK--GRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 760 ~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~ 833 (1031)
.|.+.+.+|. |.+|.||.+.. .+++.+|+|+=+... ........-.+|+...++++ |++.++.+..+...+.
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~--s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF--SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCC--CCccccccccchhhcccccCccccccccCcccccCCc
Confidence 3566778999 99999999954 578899999833221 12223334457777777776 9999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHH----HHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEec
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN----ALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSD 908 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~D 908 (1031)
.++-+|++. .++..+-.... .-+....++.++.+..+ |+.++|.. +++|-|+||.||+...+ ...+++|
T Consensus 193 lfiqtE~~~-~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 193 LFIQTELCG-ESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred ceeeecccc-chhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCC
Confidence 999999985 57777765432 22455678888888888 99999999 99999999999999999 8899999
Q ss_pred cccccccCCCCCCcee-----eccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 909 FGIAKFLNPHSSNWTA-----FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||+...+....-.... ..+...|++||..++ .++.++|+|++|.++.+-.+|..++... ....|.......
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g--~~~~W~~~r~~~- 342 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVG--KNSSWSQLRQGY- 342 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCC--CCCCcccccccc-
Confidence 9999988654422221 257788999998776 7889999999999999999987663322 111111111110
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+..++-. ....++...+..|+..+|..|++.+++..
T Consensus 343 --ip~e~~~------~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 343 --IPLEFCE------GGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --Cchhhhc------CcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1111111 11123444778899999999999988764
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.2e-12 Score=145.30 Aligned_cols=145 Identities=19% Similarity=0.238 Sum_probs=101.7
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhh------------------------------------cHHHHH
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMA------------------------------------DQDEFL 807 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~------------------------------------~~~~~~ 807 (1031)
.+.||.|++|.||+|+..+|+.||||+.+......-.. ..-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999999999999986532110000 001355
Q ss_pred HHHHHHhcCC-----CCceeeeeeeE-ecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHH-HHHHhhh
Q 043316 808 NEVLALTEIR-----HRNIIKFHGFC-SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN-ALSYLHH 880 (1031)
Q Consensus 808 ~Ei~~l~~l~-----h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-~L~~LH~ 880 (1031)
+|...+.+++ ++++ .+-.++ ......++||||++|+++.++...... .. ....++.+++. .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHh
Confidence 5666655552 3333 222222 223456999999999999887653211 11 23456666666 4678898
Q ss_pred CCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 881 ~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
. |++|+|+||.||+++.++.++++|||++..+++
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 8 999999999999999999999999999987753
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.3e-13 Score=135.32 Aligned_cols=198 Identities=22% Similarity=0.338 Sum_probs=135.5
Q ss_pred HhcCCCCceeeeeeeEecC-----CeeEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 043316 813 LTEIRHRNIIKFHGFCSNA-----QHSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886 (1031)
Q Consensus 813 l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 886 (1031)
+-++.|-|||+++.|+.+. ....+++|||..|++..++++.. ....+......+++.||..||.|||+. .|.|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 4455799999999998654 35789999999999999998653 234566777889999999999999985 7799
Q ss_pred eeCCCCCCCeeeCCCCceEEeccccccccCCC-----CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhC
Q 043316 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH-----SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG 961 (1031)
Q Consensus 887 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG 961 (1031)
+|+++..+-|++..+|-+|++--.-.. ..+. ......-.+-++|.|||.-.....+.++|||+||+...||.-|
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 999999999999999988885321111 1110 0011223456899999986666677899999999999999887
Q ss_pred CCC-CCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 962 NHP-RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 962 ~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..- -....... ....+.......-.+ .=.+.+..|++..|..||+|++++.
T Consensus 279 Eiq~tnseS~~~-----~ee~ia~~i~~len~----------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 279 EIQSTNSESKVE-----VEENIANVIIGLENG----------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred eeccCCCcceee-----hhhhhhhheeeccCc----------cccCcCcccccCCCCCCcchhhhhc
Confidence 543 11111100 000111110000000 0124567899999999999998764
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.2e-11 Score=134.34 Aligned_cols=168 Identities=20% Similarity=0.272 Sum_probs=130.0
Q ss_pred EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCcccc
Q 043316 779 ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858 (1031)
Q Consensus 779 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~ 858 (1031)
+..++.+|.|..++...- ...+...+-++.++.++||||+++++.++.++..|+|+|.+. .|..+++..
T Consensus 33 ~k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l----- 101 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL----- 101 (690)
T ss_pred eeccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh-----
Confidence 455788888888765431 234556788899999999999999999999999999999884 566666643
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeeccccCcccccccc
Q 043316 859 FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH 938 (1031)
Q Consensus 859 l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~ 938 (1031)
+...+.-.+.||+.||.|||+.| +++|++|.-+.|+|+..|+.||++|.++.............+--..|..|+.+.
T Consensus 102 -~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 102 -GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEID 178 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcC
Confidence 34567778999999999999776 899999999999999999999999999876543322122223334567777543
Q ss_pred ccCCCccccchhhhHHHHHHHhCC
Q 043316 939 MMRATEKYDVHSFGVLALEVIKGN 962 (1031)
Q Consensus 939 ~~~~~~~sDvwslG~il~elltG~ 962 (1031)
... ...|.|.|||+++|++.|.
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCcc
Confidence 221 4569999999999999983
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.4e-12 Score=130.34 Aligned_cols=136 Identities=31% Similarity=0.339 Sum_probs=93.9
Q ss_pred CCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCc
Q 043316 479 PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSK 558 (1031)
Q Consensus 479 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 558 (1031)
..+...+.|++||||+|.|+ .+.....-++.++.|+++.|+|+.. . .+..+++|+.||||+|.++ .+..+-..+-+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v-~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV-Q-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee-h-hhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 33444566888888888887 4556666677888888888887732 2 2677788888888888877 44445556677
Q ss_pred cceecccCcccCCCCchhhccccccCceeccCcccCCcC-CccccCcccchhhhcCCCccCCC
Q 043316 559 LHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEI-PPQICNMESLEELNLSHNNLFDL 620 (1031)
Q Consensus 559 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ 620 (1031)
.++|.|++|.|.. -..+.++-+|..||+++|+|.... ...+++++.|+.|.|.+|++.++
T Consensus 354 IKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 354 IKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred EeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 7888888887753 245666777777788888776321 34567777777777777777665
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.8e-11 Score=140.31 Aligned_cols=149 Identities=17% Similarity=0.213 Sum_probs=96.3
Q ss_pred HhccCccceeecCCCccEEEEEeCC-CcEEEEEEccchhhhh---h----------------------h-----hcH---
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFD---E----------------------M-----ADQ--- 803 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~---~----------------------~-----~~~--- 803 (1031)
...|+. +.+|.|++|.||+|+.++ |+.||||+.+...... + . +..
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999998877 9999999997542100 0 0 001
Q ss_pred ---HHHHHHHHHHhcCC----CCceeeeeeeEec-CCeeEEEEEeccCCCchhhc--ccCC-ccccCCHHHHHHHHHHHH
Q 043316 804 ---DEFLNEVLALTEIR----HRNIIKFHGFCSN-AQHSFIVSEYLDRGSLTTIL--KDDA-AAKEFGWNQRMNVIKGVA 872 (1031)
Q Consensus 804 ---~~~~~Ei~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l--~~~~-~~~~l~~~~~~~i~~~i~ 872 (1031)
-++.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++. ...+ ....+....+..++.|+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 12444554444442 3333333333322 34568999999999997753 2211 111233333334444443
Q ss_pred HHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEeccccccccCC
Q 043316 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNP 917 (1031)
Q Consensus 873 ~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a~~~~~ 917 (1031)
.. |++|+|+||.||+++.++ .++++|||++..+++
T Consensus 278 -------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 -------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 45 999999999999999988 999999999987754
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2e-12 Score=130.87 Aligned_cols=133 Identities=29% Similarity=0.298 Sum_probs=66.5
Q ss_pred cccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcc
Q 043316 168 EIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL 247 (1031)
Q Consensus 168 ~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 247 (1031)
.+.....|++||||+|.++ .|.+++.-++.++.|++++|.+. .+.. +..|.+|+.||||+|.++ .+-..-.+|-+.
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNI 354 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCE
Confidence 3334445555666666555 55555555555666666666554 2222 555555555666655555 333333445555
Q ss_pred cEEEeecCcCCCCCCccccccccccccccccccccccC-CcccccCCCCCeeeeccCccC
Q 043316 248 GILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI-PLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 248 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
+.|.|+.|.+... +.++++-+|..||+++|+|...- -..+++++.|+++.|.+|.+.
T Consensus 355 KtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 355 KTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred eeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 5555555555432 23445555555555555554211 113444444444444444443
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.17 E-value=1e-10 Score=117.70 Aligned_cols=130 Identities=19% Similarity=0.183 Sum_probs=95.3
Q ss_pred ceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCce-eeeeeeEecCCeeEEEEEeccC
Q 043316 765 YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI-IKFHGFCSNAQHSFIVSEYLDR 843 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 843 (1031)
+.++.|.++.||+++. .++.|++|+...... ....+.+|+.+++.+.+.++ .+++++.. ...++||||+++
T Consensus 4 ~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G 75 (170)
T cd05151 4 SPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG 75 (170)
T ss_pred eecCCcccCceEEEEE-CCeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence 5689999999999987 478899998754321 12345688888888865443 45555443 335799999999
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC--CCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC--LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
.++.+.. . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 76 ~~l~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred Ccccccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 8876430 0 11245778999999999982 11259999999999998 67899999998874
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.8e-11 Score=146.41 Aligned_cols=275 Identities=24% Similarity=0.280 Sum_probs=166.0
Q ss_pred cCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCc--ccCCCCc-cccccccceEEEeeccccCCCCCccccCccc
Q 043316 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQ--LSGVIPQ-EIGHLTCLRMLYFDVNHLHGSIPLEIGKLSL 174 (1031)
Q Consensus 98 ~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~--l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 174 (1031)
.+....+...+-+|.+. .++... ..++|+.|-+..|. +. .++. .|..++.|++|||++|.--+.+|.+|++|-+
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~ 596 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH 596 (889)
T ss_pred cchhheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh
Confidence 33455677777777765 444433 23378888888875 44 3443 3667888888888887777788888888888
Q ss_pred CceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccc--cccCccccccCcccEEEe
Q 043316 175 INVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLR--GSIPFSLANLSNLGILYL 252 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L 252 (1031)
|++|+|++..++ .+|..+++|+.|.+|++..+.-...+|..+..|++|++|.+..-... ...-..+.+|.+|+.+..
T Consensus 597 LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 597 LRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred hhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 888888888888 88888888888888888887765566777777888888887665422 222233445555555554
Q ss_pred ecCcCCCCCCcccccccccc----ccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCC------hhhhhhh
Q 043316 253 YKNSLFGFIPSVIGNLKSLF----ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN------LEALSEL 322 (1031)
Q Consensus 253 ~~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~L~~L 322 (1031)
..... .+-..+..+..|. .+.+.++... ..+..+..+.+|+.|.+.++.+.......... ++++..+
T Consensus 676 ~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~ 752 (889)
T KOG4658|consen 676 TISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKV 752 (889)
T ss_pred ecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHH
Confidence 33322 1111223333333 3333333332 45567788888999999888886433333222 2223333
Q ss_pred hccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCC
Q 043316 323 GLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV 380 (1031)
Q Consensus 323 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 380 (1031)
...++... ..+.+.--.++|+.|++..+.....+.+....+..+..+.+..+.+.+.
T Consensus 753 ~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 753 SILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred Hhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 33222221 1223333456777777777766655555555555555555555555443
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.5e-11 Score=136.64 Aligned_cols=245 Identities=20% Similarity=0.221 Sum_probs=173.7
Q ss_pred HhccCccceeecCCCccEEEEEe--CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL--PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
..+|..+..||.|.|+.|+.... .++..|++|........ ..+...-..|+.+...+. |.++++++..+......
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~--~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT--FASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccc--hHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 46788899999999999999843 46789999988665421 122333456776666664 88999988888887788
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEecccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGIAK 913 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~ 913 (1031)
|+-.||+++++......- ...+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..+++|||.+.
T Consensus 342 ~ip~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred cCchhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccc
Confidence 899999999988777632 23466778899999999999999998 99999999999999886 789999999997
Q ss_pred ccCCCCCCceeeccccCcc--ccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYA--APEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
.+.- ........-+++ +|+......+..+.|++|||.-++|..+|..- ..... .+. .+....-+..+
T Consensus 416 ~~~~---~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l-s~~~~---~~~----~i~~~~~p~~~ 484 (524)
T KOG0601|consen 416 RLAF---SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL-SESGV---QSL----TIRSGDTPNLP 484 (524)
T ss_pred ccce---ecccccccccccccchhhccccccccccccccccccccccccCccc-Ccccc---cce----eeecccccCCC
Confidence 5321 112222334444 55555566788899999999999999998643 11110 011 11111111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 1028 (1031)
. .. ..+..+.+.+..+|+..||.+.++...
T Consensus 485 ~---~~----~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 485 G---LK----LQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred c---hH----HhhhhhhhhhcCCccccchhhhhhccc
Confidence 1 11 245566677899999999999887654
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.7e-11 Score=141.59 Aligned_cols=199 Identities=31% Similarity=0.327 Sum_probs=96.0
Q ss_pred ccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCccc
Q 043316 169 IGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG 248 (1031)
Q Consensus 169 ~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 248 (1031)
++.+++|+.|++.+|++. .+...+..+++|++|++++|.|+... .+..++.|+.|++++|.++ .+ ..+..+.+|+
T Consensus 91 l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~-~~-~~~~~l~~L~ 165 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLIS-DI-SGLESLKSLK 165 (414)
T ss_pred cccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhheeccCcch-hc-cCCccchhhh
Confidence 344444444444444444 33332444555555555555554221 1334444555555555554 12 1233355555
Q ss_pred EEEeecCcCCCCCC-ccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhcccc
Q 043316 249 ILYLYKNSLFGFIP-SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYIN 327 (1031)
Q Consensus 249 ~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 327 (1031)
.+++++|+++..-+ . ...+.+|+.+++.+|.+.. ...+..+..+..+++..|.++..-+.....+..|+.+++++|
T Consensus 166 ~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n 242 (414)
T KOG0531|consen 166 LLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGN 242 (414)
T ss_pred cccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccceeccCcccchhHHHHHHhcccC
Confidence 55555555554322 1 3455566666666666542 122333344444455555555222211111113666667766
Q ss_pred ccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccC
Q 043316 328 QLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378 (1031)
Q Consensus 328 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 378 (1031)
++.. ++..+..+..+..|++.+|++... ..+.....+..+....|.+.
T Consensus 243 ~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 243 RISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred cccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 6662 334455566666666666666533 22444455555556666554
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2e-11 Score=130.54 Aligned_cols=137 Identities=29% Similarity=0.205 Sum_probs=62.8
Q ss_pred cCCCCCCCeeccccccccCccc--ccccCCCccccccCcccccCCCCCCCc-cCCCCCcEEEeeCCcccCCC-hhhhhcc
Q 043316 433 FGDHPNLTFLDLSQNNLYGEIS--FNWRNFPKLGTFNASMNNIYGSIPPEI-GDSSKLQVLDLSSNHIVGKI-PVQFEKL 508 (1031)
Q Consensus 433 ~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~~~L~~L~l~~N~i~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~-p~~~~~l 508 (1031)
...+++++.||||+|-++.... .....+|+|+.|+++.|++........ ..+++|+.|.|++|.++-.. -.....+
T Consensus 142 ~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~f 221 (505)
T KOG3207|consen 142 SKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTF 221 (505)
T ss_pred hhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhC
Confidence 3445555555555555443111 112334444444444444432221111 13456777777777765221 1223345
Q ss_pred ccCceeecccccccCCCcccccccCccceeecCcCcCCCCCc--ccccCCCccceecccCcccC
Q 043316 509 FSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP--KSMGNLSKLHYLNLSNNQFN 570 (1031)
Q Consensus 509 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~ 570 (1031)
++|+.|+|..|...........-+..|+.|||++|.+-+ .+ .....++.|..|+++.+.|.
T Consensus 222 Psl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 222 PSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred CcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhccccCcc
Confidence 566666666663222222333344556666666655542 12 23344555555555555554
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.7e-10 Score=112.30 Aligned_cols=140 Identities=19% Similarity=0.253 Sum_probs=99.8
Q ss_pred ceeecCCCccEEEEEeCC-------CcEEEEEEccchhh-hh--------h---------hhcHHHHH----HHHHHHhc
Q 043316 765 YCIGKGRQGSVYKAELPS-------GIIFAVKKFNSQLL-FD--------E---------MADQDEFL----NEVLALTE 815 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~--------~---------~~~~~~~~----~Ei~~l~~ 815 (1031)
..||.|--+.||.|...+ +..+|||+++.... ++ + ....+.+. +|+..+++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999996543 57999998753221 00 0 01122233 89999988
Q ss_pred CC--CCceeeeeeeEecCCeeEEEEEeccCCCchh-hcccCCccccCCHHHHHHHHHHHHHHHHHh-hhCCCCCeeeCCC
Q 043316 816 IR--HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTT-ILKDDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLPPIVHGDI 891 (1031)
Q Consensus 816 l~--h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dl 891 (1031)
+. .-++.+.+++ ...++||||+.+..+.. .+++. .++..+...+..+++.++..| |+. |+||||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 85 3466677764 45689999997654321 22221 234456677889999999999 788 9999999
Q ss_pred CCCCeeeCCCCceEEeccccccccC
Q 043316 892 SSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 892 kp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
++.||+++ ++.+.++|||.+...+
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999996 5789999999998654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.6e-11 Score=141.84 Aligned_cols=197 Identities=32% Similarity=0.347 Sum_probs=108.7
Q ss_pred cCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccE
Q 043316 170 GKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGI 249 (1031)
Q Consensus 170 ~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 249 (1031)
..+..++.+++..|.+. .+-..+..+++|+.|++.+|+|. .+...+..+.+|++|+|++|+|+... .+..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhh
Confidence 34566666777777776 34344667777777777777776 34444666777777777777776322 2555566777
Q ss_pred EEeecCcCCCCCCccccccccccccccccccccccCC-cccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccc
Q 043316 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIP-LSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ 328 (1031)
Q Consensus 250 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 328 (1031)
|++++|.++.. ..+..+++|+.+++++|++...-+ . ...+.+++.+++.+|.+. ....+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhhccccc
Confidence 77777777643 345556667777777777663333 1 355556666666666654 22233334444444555555
Q ss_pred cCCCCccccccccc--CceEEcccCCCcCccCCccCcccccceEEccccccC
Q 043316 329 LDGVIPPSIGNLSS--LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378 (1031)
Q Consensus 329 l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 378 (1031)
++..-+ +..+.. |+.+++++|.+... +..+..+..+..|++.+|++.
T Consensus 220 i~~~~~--l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 220 ISKLEG--LNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred ceeccC--cccchhHHHHHHhcccCccccc-cccccccccccccchhhcccc
Confidence 543211 111122 45555555554322 133344444444444444443
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.9e-11 Score=117.54 Aligned_cols=122 Identities=29% Similarity=0.351 Sum_probs=42.9
Q ss_pred cCceeecccccccCCCccccc-ccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceec
Q 043316 510 SLNKLILNLNQLSGGVPLEFG-SLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDL 588 (1031)
Q Consensus 510 ~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 588 (1031)
++++|+|++|+|+ .+. .++ .+.+|+.|||++|.|+.. +.+..++.|++|++++|+|+...+.....+++|++|+|
T Consensus 20 ~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred ccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 4445555555554 222 232 456677777777777632 24666777777777777776543322245777777888
Q ss_pred cCcccCCcC-CccccCcccchhhhcCCCccCCCCc---cccccCCcceEEe
Q 043316 589 SHNFLQGEI-PPQICNMESLEELNLSHNNLFDLIP---GCFEEMRSLSRID 635 (1031)
Q Consensus 589 s~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~ 635 (1031)
++|+|.... -..+..+++|+.|+|.+|+++.... -.+..+|+|+.||
T Consensus 96 ~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 96 SNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred cCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 877776422 2445667788888888888865411 1345678888776
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.3e-11 Score=128.53 Aligned_cols=115 Identities=25% Similarity=0.403 Sum_probs=67.7
Q ss_pred cccccCccceeecCcCcCCC----CCcccccCCCccceecccCcccCCC----CchhhccccccCceeccCcccCCcCCc
Q 043316 528 EFGSLTELQYLDLSANKLSS----SIPKSMGNLSKLHYLNLSNNQFNHK----IPTEFEKLIHLSELDLSHNFLQGEIPP 599 (1031)
Q Consensus 528 ~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 599 (1031)
.|...+.|+.+.+++|.|.. .....|..++.|+.|||.+|-++.. +...++.+++|++|+++++.+...-..
T Consensus 180 ~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~ 259 (382)
T KOG1909|consen 180 AFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAI 259 (382)
T ss_pred HHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHH
Confidence 34444556666666665541 1123455566666666666666532 344566666777777777776643332
Q ss_pred cc-----cCcccchhhhcCCCccCCC----CccccccCCcceEEeccccccc
Q 043316 600 QI-----CNMESLEELNLSHNNLFDL----IPGCFEEMRSLSRIDIAYNELQ 642 (1031)
Q Consensus 600 ~~-----~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~ 642 (1031)
.| ...++|++|.+.+|.|+.- +..+....+.|..|+|++|.+.
T Consensus 260 a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 260 AFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 22 2356777777777777542 2334455777888888888874
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-10 Score=143.27 Aligned_cols=132 Identities=31% Similarity=0.452 Sum_probs=105.7
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccc--cCCCCCcc-ccCcccCceeeccCcccCCCCCCcccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNH--LHGSIPLE-IGKLSLINVLTLCHNNFSGRIPPSLGNLS 197 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~--l~~~~p~~-~~~l~~L~~L~L~~n~l~~~ip~~~~~l~ 197 (1031)
..+....+...+-+|++. .++....+ ++|++|-+..|. +. .++.. |..++.|++|||++|.--+.+|.++++|-
T Consensus 519 ~~~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li 595 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELV 595 (889)
T ss_pred ccchhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhh
Confidence 344477888888888876 55555433 378899998886 44 55554 67799999999999877779999999999
Q ss_pred cccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 198 NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 198 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|++|++++..+. .+|..+++|++|.+|++..+.-...+|.....|++|++|.+..-.
T Consensus 596 ~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 596 HLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 9999999999987 789999999999999999887666677777778999999887654
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.2e-11 Score=138.68 Aligned_cols=251 Identities=21% Similarity=0.192 Sum_probs=172.1
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
..+++.+.+-+..|+++.++.++- ..|...+.|......... ..+.+...++-.+.-..+||.+++...-+......+
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~-~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIR-TNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhc-cccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 346677778899999999998843 345555555443321111 112233333333333345678887777666778889
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+|++|..++++..-++.... .+..-.+.....+.++.+|||.. .+.|||++|.|.+...+++.+++|||.....
T Consensus 881 L~~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhhHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 99999999999999887652 34455666777889999999998 7899999999999999999999999844322
Q ss_pred CC------C---------------C----------CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCC
Q 043316 916 NP------H---------------S----------SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 916 ~~------~---------------~----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P 964 (1031)
.- . . .......+|+.|.|||...+......+|.|+.|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 10 0 0 001235689999999999999999999999999999999999999
Q ss_pred CCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHH
Q 043316 965 RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023 (1031)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 1023 (1031)
|...... .+.+.+.....+.+...........+++...+..+|.+|-.+.
T Consensus 1035 ~na~tpq---------~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQ---------QIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcchh---------hhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 8755442 1111111111222222223333455666777888999987665
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-10 Score=114.60 Aligned_cols=36 Identities=36% Similarity=0.246 Sum_probs=12.9
Q ss_pred ccccCcccEEEeecCcCCCCC---Ccccccccccccccc
Q 043316 241 LANLSNLGILYLYKNSLFGFI---PSVIGNLKSLFELDL 276 (1031)
Q Consensus 241 l~~l~~L~~L~L~~N~l~~~~---p~~~~~l~~L~~L~L 276 (1031)
+..+++|+.|+|.+|.++... ...+..+++|+.||-
T Consensus 109 L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 109 LSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp GGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred HHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 334445555555555444221 113445566666554
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.1e-11 Score=124.93 Aligned_cols=134 Identities=23% Similarity=0.306 Sum_probs=86.4
Q ss_pred CCCcEEEeeCCcccCCC----hhhhhccccCceeecccccccC----CCcccccccCccceeecCcCcCCCC----Cccc
Q 043316 485 SKLQVLDLSSNHIVGKI----PVQFEKLFSLNKLILNLNQLSG----GVPLEFGSLTELQYLDLSANKLSSS----IPKS 552 (1031)
Q Consensus 485 ~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 552 (1031)
++|+++..++|++.... ...|...+.|+.+.++.|.|.. .+...|..+++|+.|||..|-++.. +...
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Laka 236 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKA 236 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHH
Confidence 45666666666664322 2234444566666666665542 1223566778888888888877632 3355
Q ss_pred ccCCCccceecccCcccCCCCchhh-----ccccccCceeccCcccCCc----CCccccCcccchhhhcCCCccC
Q 043316 553 MGNLSKLHYLNLSNNQFNHKIPTEF-----EKLIHLSELDLSHNFLQGE----IPPQICNMESLEELNLSHNNLF 618 (1031)
Q Consensus 553 ~~~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 618 (1031)
++.++.|+.|++++|.+...-..+| ...++|+.|++.+|.|+.. +...+...+.|+.|+|++|.+.
T Consensus 237 L~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 237 LSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred hcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 6777888888888888875543332 3467888899999988732 2334456789999999999994
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.99 E-value=9e-11 Score=125.62 Aligned_cols=187 Identities=24% Similarity=0.170 Sum_probs=90.2
Q ss_pred ccccccCceEEcccCCCcCcc--CCccCcccccceEEccccccCCCcccc-ccCCCCCceEeccCcccCCcCchhccCCc
Q 043316 337 IGNLSSLRTLYLYDNGFYGLV--PNEIGYLKSLSKLELCRNHLSGVIPHS-IGNLTKLVLVNMCENHLFGLIPKSFRNLT 413 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 413 (1031)
...|++++.|+|+.|-++... ......|++|+.|+|+.|++....... -..+++|+.|.++.|.++
T Consensus 142 ~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls----------- 210 (505)
T KOG3207|consen 142 SKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLS----------- 210 (505)
T ss_pred hhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCC-----------
Confidence 334555666666666554321 122345666666666666654221111 112344444444444443
Q ss_pred cccceecccccccccc-ccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCC-CCCccCCCCCcEEE
Q 043316 414 SLERLRFNQNNLFGKV-YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSI-PPEIGDSSKLQVLD 491 (1031)
Q Consensus 414 ~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~-p~~~~~l~~L~~L~ 491 (1031)
... ......+|+|..|+|..|....+.......+..|++|+|++|++.... -...+.++.|+.|+
T Consensus 211 -------------~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 211 -------------WKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred -------------HHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 111 111223344444444444332333333334444444444444443211 12344556666666
Q ss_pred eeCCcccCC-Chhh-----hhccccCceeecccccccCC-CcccccccCccceeecCcCcCCC
Q 043316 492 LSSNHIVGK-IPVQ-----FEKLFSLNKLILNLNQLSGG-VPLEFGSLTELQYLDLSANKLSS 547 (1031)
Q Consensus 492 Ls~N~l~~~-~p~~-----~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~ 547 (1031)
++.+.|..+ .|+. ...+++|+.|+++.|++... .-..+..+.+|+.|.+..|.++.
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 666666533 2222 24466777777777777521 11244556778888888888873
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.99 E-value=4e-09 Score=111.33 Aligned_cols=143 Identities=22% Similarity=0.306 Sum_probs=109.8
Q ss_pred ceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC--CceeeeeeeEecC---CeeEEEEE
Q 043316 765 YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH--RNIIKFHGFCSNA---QHSFIVSE 839 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~~~~~~~---~~~~lv~e 839 (1031)
+.++.|..+.||++...+|+.+++|+....... .....+.+|+++++.+++ ..+.+++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999998767789999997554311 134567899999999875 4467777777654 36689999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC-------------------------------------
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC------------------------------------- 882 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------- 882 (1031)
|++|.++.+.+.. ..++..+...++.++++++++||+..
T Consensus 81 ~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 81 RVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 9999988776542 13566777788888888888888521
Q ss_pred ----------------CCCeeeCCCCCCCeeeCC--CCceEEeccccccc
Q 043316 883 ----------------LPPIVHGDISSKNVLLDS--EHEAHVSDFGIAKF 914 (1031)
Q Consensus 883 ----------------~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~ 914 (1031)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 56789999998874
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.8e-09 Score=101.25 Aligned_cols=134 Identities=24% Similarity=0.418 Sum_probs=100.5
Q ss_pred eeecCCCccEEEEEeCCCcEEEEEEc-cchhh---hhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEec
Q 043316 766 CIGKGRQGSVYKAELPSGIIFAVKKF-NSQLL---FDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 766 ~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~~~---~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
.+++|+-+.+|.+.+. |..+++|.= ++... -++.-..+...+|..++.+++--.|...+=+..+.....++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 4789999999999773 444666642 22111 122233556788999999887656655555666777778999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+|-.|.+++... ...++..+-.-+.-||.. ||||+|+.++||++..++ +.++|||++..
T Consensus 82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999998888764 134667777788889999 999999999999997554 99999999985
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-09 Score=81.11 Aligned_cols=40 Identities=43% Similarity=0.904 Sum_probs=29.7
Q ss_pred hHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCC--CCCCccceeEeC
Q 043316 26 TKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATK--ISPCTWFGIFCN 73 (1031)
Q Consensus 26 ~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~--~~~C~w~gv~c~ 73 (1031)
++|++||++||+++.. ++.+.+.+|+ .+ ++||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~--~~~~~l~~W~------~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNN--DPSGVLSSWN------PSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT---SC-CCCTT--------TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhccc--ccCcccccCC------CcCCCCCeeeccEEeC
Confidence 6799999999999983 3367899998 33 799999999996
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.2e-08 Score=97.81 Aligned_cols=146 Identities=19% Similarity=0.280 Sum_probs=108.1
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEc-cc----hhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKF-NS----QLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~----~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
....+-+|+-+.|+++.+ .|+.++||.= .+ +.. +..-..++..+|++.+.+++--.|.-..=++.+...-.++
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~L-D~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPAL-DQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHH-HHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 456789999999999988 7887777742 22 111 2223456778999999988755555555556666666899
Q ss_pred EEeccC-CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEecccccc
Q 043316 838 SEYLDR-GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAK 913 (1031)
Q Consensus 838 ~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~ 913 (1031)
|||++| .++.+++....... .........+++|-+.+.-||.. +|+|+||..+||++..++. +.++|||++.
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EEeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 999987 47888886654222 22233368899999999999999 9999999999999987663 5899999987
Q ss_pred c
Q 043316 914 F 914 (1031)
Q Consensus 914 ~ 914 (1031)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 4
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.6e-08 Score=102.68 Aligned_cols=255 Identities=15% Similarity=0.161 Sum_probs=156.8
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeee----E--ecC-Cee
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGF----C--SNA-QHS 834 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~----~--~~~-~~~ 834 (1031)
.++.||+|+.+.+|..-. -+..+.|++...... ... +.+..+... .||-+-.-+.+ - -++ ...
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa----~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPA----AQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCch----HHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 456799999999997622 223356777654321 111 122333333 46643321111 1 112 225
Q ss_pred EEEEEeccCC-Cchhhcc---cCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 835 FIVSEYLDRG-SLTTILK---DDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 835 ~lv~e~~~~g-sL~~~l~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
-+.|..+++. -...+.+ +........|....++++.+|.+.+.||+. |.+-+|+.++|+|+.+++.+.+.|-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccc
Confidence 6777777664 2222222 222234578999999999999999999999 99999999999999999999999865
Q ss_pred cccccCCCCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhC-CCCCCCcCcc---chhhhhhHHH
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKG-NHPRDYVSTN---FSSFSNMITE 981 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG-~~P~~~~~~~---~~~~~~~~~~ 981 (1031)
.-... ..+......+|...|.+||.-. +..-+...|-|.+|+++++++.| ++||...... ...+...+..
T Consensus 163 sfqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 163 SFQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred ceeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 44432 2334456678999999999744 33446789999999999999996 9998754321 1111111110
Q ss_pred h----h-hhcCCCCCCCChh-HHHHHHHHHHHHHhhccC--CCCCCCCHHHHHHHhh
Q 043316 982 I----N-QNLDHRLPTPSRD-VMDKLMSIMEVAILCLVE--SPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 982 ~----~-~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~--dP~~Rps~~evl~~L~ 1030 (1031)
. . .......+.+... +.-....+..+..+|+.. .|.-|||++..+..|.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~ 298 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALD 298 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Confidence 0 0 0111111111111 111123456667778776 3668999998887663
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.2e-08 Score=98.58 Aligned_cols=130 Identities=25% Similarity=0.315 Sum_probs=85.0
Q ss_pred cEEEEEeCCCcEEEEEEccchhh-h---------------------hhhhcHHHHHHHHHHHhcCCCC--ceeeeeeeEe
Q 043316 774 SVYKAELPSGIIFAVKKFNSQLL-F---------------------DEMADQDEFLNEVLALTEIRHR--NIIKFHGFCS 829 (1031)
Q Consensus 774 ~Vy~~~~~~~~~vavK~~~~~~~-~---------------------~~~~~~~~~~~Ei~~l~~l~h~--niv~l~~~~~ 829 (1031)
.||.|...+|..+|||+.+.... + ..........+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999888999999998754211 0 0111134577899999999755 566776553
Q ss_pred cCCeeEEEEEecc--CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHH-hhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 830 NAQHSFIVSEYLD--RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY-LHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 830 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
..++||||++ |..+..+.... ++......++.+++..+.. +|.. ||+|+|+.+.||+++++ .+.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 3479999998 54554433221 1124566788888886666 4677 99999999999999877 9999
Q ss_pred eccccccccC
Q 043316 907 SDFGIAKFLN 916 (1031)
Q Consensus 907 ~Dfg~a~~~~ 916 (1031)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999988654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=6e-08 Score=103.61 Aligned_cols=146 Identities=20% Similarity=0.116 Sum_probs=103.6
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhh-------hcHHHHHHHHHHHhcCCCCc--eeeeeeeEec----
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEM-------ADQDEFLNEVLALTEIRHRN--IIKFHGFCSN---- 830 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-------~~~~~~~~Ei~~l~~l~h~n--iv~l~~~~~~---- 830 (1031)
++.+-+.....|+++.. +|+.|.||+........-. .....+.+|...+.++...+ .++.+++.+.
T Consensus 27 ~e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 27 GEVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred CcEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 35566666666888766 7889999987543311100 11124778988888874333 3344555543
Q ss_pred -CCeeEEEEEeccCC-CchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-------C
Q 043316 831 -AQHSFIVSEYLDRG-SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-------E 901 (1031)
Q Consensus 831 -~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------~ 901 (1031)
....++|+|++++. +|.+++.... ..+.+......++.+++..+.-||+. ||+|+|++++||+++. +
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23568999999886 8988885321 12345567789999999999999999 9999999999999975 4
Q ss_pred CceEEeccccccc
Q 043316 902 HEAHVSDFGIAKF 914 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~ 914 (1031)
+.+.++||+.+..
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6799999998864
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.3e-09 Score=85.28 Aligned_cols=59 Identities=46% Similarity=0.598 Sum_probs=26.4
Q ss_pred ccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcc
Q 043316 534 ELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592 (1031)
Q Consensus 534 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 592 (1031)
+|++|++++|+++...+..|.++++|++|++++|+|+.+.|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444444444444444444444444444444444444444443
|
... |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.6e-09 Score=85.10 Aligned_cols=59 Identities=37% Similarity=0.579 Sum_probs=28.4
Q ss_pred ccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEeccccc
Q 043316 582 HLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNE 640 (1031)
Q Consensus 582 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 640 (1031)
+|++|++++|+|+...+..|..+++|++|++++|.|+.+.|+.|..+++|+.|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444444455555555555544444455555555555555554
|
... |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-07 Score=96.01 Aligned_cols=140 Identities=22% Similarity=0.232 Sum_probs=99.3
Q ss_pred cCccceeecCCCccEEEEEeCCCcEEEEEEccchhh------------hh----h--hhcHHHHHHHHHHHhcCCCC--c
Q 043316 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLL------------FD----E--MADQDEFLNEVLALTEIRHR--N 820 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------~~----~--~~~~~~~~~Ei~~l~~l~h~--n 820 (1031)
..++..||-|--+.||.|..++|.++|||.=+.... .+ . ........+|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456788999999999999999999999995321110 00 0 11234567899999998644 6
Q ss_pred eeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC
Q 043316 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 821 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
|.+.+++ +...+||||++|--|...= ++......++..|.+-+...-.. ||||+|+.+-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 6666654 4558999999985553321 12233445555666666555566 9999999999999999
Q ss_pred CCceEEecccccccc
Q 043316 901 EHEAHVSDFGIAKFL 915 (1031)
Q Consensus 901 ~~~~kl~Dfg~a~~~ 915 (1031)
||.+.++||--+...
T Consensus 238 dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 238 DGDIVVIDWPQAVPI 252 (304)
T ss_pred CCCEEEEeCcccccC
Confidence 999999999776644
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.2e-09 Score=123.35 Aligned_cols=129 Identities=33% Similarity=0.350 Sum_probs=102.5
Q ss_pred CCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcc-cccCCCccceec
Q 043316 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPK-SMGNLSKLHYLN 563 (1031)
Q Consensus 485 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ 563 (1031)
..|.+.+.+.|.+. .+..++.-++.|+.|+|++|+++... .+..|+.|++|||++|.++ .+|. ...++. |+.|+
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeee
Confidence 36778888899887 66777888889999999999998544 7788999999999999998 4443 344444 99999
Q ss_pred ccCcccCCCCchhhccccccCceeccCcccCCcC-CccccCcccchhhhcCCCccCCC
Q 043316 564 LSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEI-PPQICNMESLEELNLSHNNLFDL 620 (1031)
Q Consensus 564 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ 620 (1031)
|++|.++.. ..+.+|++|+.||+|+|-|.+.- -..+..|..|+.|+|.||++-..
T Consensus 239 lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 239 LRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred ecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 999999743 56788999999999999997532 12356678999999999999543
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.5e-08 Score=115.94 Aligned_cols=150 Identities=20% Similarity=0.269 Sum_probs=98.9
Q ss_pred HHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC----ce-----eeccccCcccccccc
Q 043316 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN----WT-----AFAGTFGYAAPEIAH 938 (1031)
Q Consensus 868 ~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----~~-----~~~gt~~y~aPE~~~ 938 (1031)
+.+++.|+.|+|... ++||++|.|++|.++..+.+||+.|+++....++... ++ ...-...|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 445569999999873 8999999999999999999999999998765442211 11 112356799999999
Q ss_pred ccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCC
Q 043316 939 MMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPE 1017 (1031)
Q Consensus 939 ~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 1017 (1031)
+...+.++|+||+|+.+|.+.. |+.-+..... ...+..............-... ..++.+=+.+++..++.
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~-~~~~~~~~~~~~~~~~~~s~~~-------p~el~~~l~k~l~~~~~ 254 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGG-LLSYSFSRNLLNAGAFGYSNNL-------PSELRESLKKLLNGDSA 254 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCC-cchhhhhhcccccccccccccC-------cHHHHHHHHHHhcCCcc
Confidence 8888999999999999999995 4444332221 1111111111111100000111 12344455677999999
Q ss_pred CCCCHHHHHH
Q 043316 1018 ARPTMKKVCN 1027 (1031)
Q Consensus 1018 ~Rps~~evl~ 1027 (1031)
.||++.++..
T Consensus 255 ~rp~~~~l~~ 264 (700)
T KOG2137|consen 255 VRPTLDLLLS 264 (700)
T ss_pred cCcchhhhhc
Confidence 9998777653
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.9e-06 Score=95.19 Aligned_cols=169 Identities=17% Similarity=0.249 Sum_probs=125.4
Q ss_pred CCccEEEE-EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----CCeeEEEEEeccCC-
Q 043316 771 RQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----AQHSFIVSEYLDRG- 844 (1031)
Q Consensus 771 ~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~g- 844 (1031)
-..+.|++ ...||..|++|++...... ..-.-..-+++.+++.|+|+|++.+++.. +..+++||+|.++.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~----~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQ----STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeecccccc----CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 44678999 4568999999999443211 11122355778899999999999999863 45789999999864
Q ss_pred CchhhcccCC------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 845 SLTTILKDDA------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 845 sL~~~l~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
+|.++--... .....++..+|.++.|+..||.++|+. |..-+-+.|++|+++.+.+++|...|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccce
Confidence 5544432111 112356789999999999999999999 9999999999999999989999888877
Q ss_pred cccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCC
Q 043316 913 KFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNH 963 (1031)
Q Consensus 913 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~ 963 (1031)
.....+.. |-+. --.+-|.=.+|.+++.|.||..
T Consensus 441 Dvl~~d~~--------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 441 DVLQEDPT--------------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred eeecCCCC--------------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 76644321 1111 2346788899999999999954
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1e-06 Score=88.75 Aligned_cols=143 Identities=17% Similarity=0.169 Sum_probs=103.9
Q ss_pred eecCCCccEEEEEeCCCcEEEEEEccchhh--hhhhhcHHHHHHHHHHHhcCCC--CceeeeeeeEec--C--CeeEEEE
Q 043316 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLL--FDEMADQDEFLNEVLALTEIRH--RNIIKFHGFCSN--A--QHSFIVS 838 (1031)
Q Consensus 767 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~~~~~~--~--~~~~lv~ 838 (1031)
-|.||-+.|++... +|..+-+|+-..... ...+-....|.+|+..+.++.. -.+.+.+.+... + ...++|+
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 36789999999876 455788887542111 0113356789999999988852 225555522211 1 2457999
Q ss_pred EeccC-CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc--eEEeccccccc
Q 043316 839 EYLDR-GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE--AHVSDFGIAKF 914 (1031)
Q Consensus 839 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 914 (1031)
|-+++ .+|.+++.... ..+.+......++.+++..++-||+. |+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98764 48988886543 23567778889999999999999999 9999999999999987676 99999976653
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.5e-09 Score=117.56 Aligned_cols=101 Identities=36% Similarity=0.400 Sum_probs=43.9
Q ss_pred CceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCc-cccccCcccEEEee
Q 043316 175 INVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLY 253 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~ 253 (1031)
|..-+.+.|.+. .+..++.-++.|++|+|++|+++.. . .+..+++|++|||+.|+++ .+|. ....+. |+.|.++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v-~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV-D-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh-H-HHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 344444444444 3444444445555555555554421 1 3444445555555555544 2332 111222 4444444
Q ss_pred cCcCCCCCCcccccccccccccccccccc
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQLF 282 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 282 (1031)
+|.++.. ..+.+|++|+.||++.|-|.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~ 267 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLS 267 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhh
Confidence 4444432 23344444444444444443
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.5e-08 Score=90.32 Aligned_cols=129 Identities=29% Similarity=0.384 Sum_probs=70.2
Q ss_pred CCcEEEeeCCcccCCChhhhhcc---ccCceeecccccccCCCccccc-ccCccceeecCcCcCCCCCcccccCCCccce
Q 043316 486 KLQVLDLSSNHIVGKIPVQFEKL---FSLNKLILNLNQLSGGVPLEFG-SLTELQYLDLSANKLSSSIPKSMGNLSKLHY 561 (1031)
Q Consensus 486 ~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 561 (1031)
.+..++|+++++- .+++....+ ..|...+|++|.+. ..|..|. ..+.++.|+|++|+|+ .+|..+..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 3556777777764 345444333 34445566666666 3343333 2345666666666666 45555666666666
Q ss_pred ecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCC
Q 043316 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFD 619 (1031)
Q Consensus 562 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 619 (1031)
|+++.|.+. ..|+.+..+.+|..||..+|.+. .+|..+.--...-..++.++++.+
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccc
Confidence 666666664 45555555666666666666665 444333222233333344444444
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=1e-08 Score=92.85 Aligned_cols=110 Identities=29% Similarity=0.419 Sum_probs=56.2
Q ss_pred cccEEecCCCcCcCCCccccccCC---cCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLS---KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~---~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
.+..+|||++.+- .|++.+..+. .|+..+|++|.+. .+|+.|.. ..+.++.|
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~-----------------------kf~t~t~l 82 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTI-----------------------KFPTATTL 82 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhh-----------------------ccchhhhh
Confidence 4556666666663 4555443333 3333466666665 34443322 22344455
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCc
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF 239 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 239 (1031)
+|++|.++ .+|..+..++.|+.|+++.|.+. ..|..+..|.+|-.||..+|.+. .+|.
T Consensus 83 Nl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 83 NLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred hcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 55555554 55555555555555555555554 44555555555555555555554 3443
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.6e-06 Score=88.23 Aligned_cols=108 Identities=20% Similarity=0.322 Sum_probs=84.6
Q ss_pred cHHHHHHHHHHHhcCC--CCceeeeeeeEecC----CeeEEEEEeccCC-CchhhcccCCccccCCHHHHHHHHHHHHHH
Q 043316 802 DQDEFLNEVLALTEIR--HRNIIKFHGFCSNA----QHSFIVSEYLDRG-SLTTILKDDAAAKEFGWNQRMNVIKGVANA 874 (1031)
Q Consensus 802 ~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 874 (1031)
....+.+|...+.++. .-.+.+.+++.+.. ...++|+|++++. +|.+++..... .+......++.+++..
T Consensus 54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARL 130 (206)
T ss_pred cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHH
Confidence 3456778888877774 33355666666542 2458999999884 89999876432 4456778899999999
Q ss_pred HHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEEecccccccc
Q 043316 875 LSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGIAKFL 915 (1031)
Q Consensus 875 L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~ 915 (1031)
++-||+. ||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 131 i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 131 IAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999 999999999999999887 8999999987753
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1031 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-48 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-38 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-48 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 3e-38 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 1e-35 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 1e-34 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 6e-26 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 1e-25 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 8e-24 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-23 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-21 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-21 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 4e-21 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 4e-21 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 4e-21 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 5e-21 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 5e-21 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 6e-21 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 6e-21 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 7e-21 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 7e-21 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 7e-21 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 7e-21 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 7e-21 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 9e-21 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 1e-20 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 1e-20 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 1e-20 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-20 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 1e-20 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-20 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 2e-20 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-20 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-20 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 2e-20 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 2e-20 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 3e-20 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 3e-20 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 3e-20 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-20 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 5e-20 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 5e-20 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 7e-20 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-19 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 3e-19 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 4e-19 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 4e-19 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 4e-19 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 6e-19 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-18 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 2e-18 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-18 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-18 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 4e-18 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 5e-18 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 5e-18 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 5e-18 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 6e-18 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 6e-18 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-18 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 7e-18 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 7e-18 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 8e-18 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 9e-18 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 9e-18 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 9e-18 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-17 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 1e-17 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 1e-17 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-17 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-17 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-16 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 7e-16 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 5e-14 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 3e-17 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 6e-17 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 8e-17 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 9e-17 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 1e-16 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-16 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-16 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 3e-16 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 6e-16 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 7e-16 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 1e-15 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 1e-15 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-15 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 1e-15 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-15 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-15 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-15 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-15 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-15 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-15 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-15 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-15 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 2e-15 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-15 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-15 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 3e-15 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 3e-15 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-15 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 3e-15 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-15 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 3e-15 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-15 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 4e-15 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-15 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 4e-15 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 4e-15 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 5e-15 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-15 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-15 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 5e-15 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 5e-15 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 5e-15 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 5e-15 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 6e-15 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 6e-15 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 6e-15 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 8e-15 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 8e-15 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 9e-15 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 9e-15 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 9e-15 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 1e-14 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 1e-14 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 1e-14 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 1e-14 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 1e-14 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-14 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 2e-14 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-14 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 2e-14 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 2e-14 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-14 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 3e-14 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-14 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-14 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 3e-14 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 4e-14 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 5e-14 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 5e-14 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 5e-14 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 5e-14 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 5e-14 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 5e-14 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 5e-14 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 5e-14 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 5e-14 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 6e-14 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 7e-14 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 7e-14 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 7e-14 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 8e-14 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 8e-14 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 9e-14 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-13 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 1e-13 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 1e-13 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-13 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 2e-13 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-13 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-13 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 2e-13 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 2e-13 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-13 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 2e-13 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-13 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 2e-13 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-13 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 3e-13 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 3e-13 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 3e-13 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-13 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 3e-13 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 3e-13 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 3e-13 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 4e-13 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 4e-13 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 4e-13 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 6e-13 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 6e-13 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 6e-13 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 6e-13 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 6e-13 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 6e-13 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 8e-13 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 8e-13 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 9e-13 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 1e-12 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 1e-12 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 1e-12 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-12 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 2e-12 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 2e-12 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 2e-12 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-12 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-12 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-12 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 2e-12 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-12 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 4e-12 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 4e-12 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-12 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 4e-12 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 4e-12 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-12 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 4e-12 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 5e-12 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 5e-12 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 6e-12 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 6e-12 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 6e-12 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 6e-12 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 6e-12 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 7e-12 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 7e-12 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 7e-12 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 7e-12 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 7e-12 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 7e-12 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 8e-12 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 8e-12 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 8e-12 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-12 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 9e-12 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 9e-12 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 9e-12 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 9e-12 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 9e-12 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 1e-11 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-11 | ||
| 3kj4_A | 286 | Structure Of Rat Nogo Receptor Bound To 1d9 Antagon | 1e-11 | ||
| 3kj4_A | 286 | Structure Of Rat Nogo Receptor Bound To 1d9 Antagon | 2e-07 | ||
| 3kj4_A | 286 | Structure Of Rat Nogo Receptor Bound To 1d9 Antagon | 5e-04 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 1e-11 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 1e-11 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 4e-09 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-11 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 1e-11 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 1e-11 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 1e-11 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 2e-11 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-11 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 2e-11 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 3e-11 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 3e-11 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 3e-11 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 3e-11 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 4e-11 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 4e-11 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 4e-11 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 4e-11 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 4e-11 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 4e-11 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 4e-11 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 4e-11 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 5e-11 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 7e-11 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 5e-09 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 7e-11 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 1e-09 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 1e-10 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 9e-09 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 1e-10 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 1e-10 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 1e-10 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 1e-10 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-10 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-10 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-10 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 1e-10 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-10 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 1e-10 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 1e-10 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 2e-10 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 2e-10 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 2e-10 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 3e-08 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 2e-10 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 2e-10 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 2e-10 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 2e-10 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 2e-10 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 2e-10 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 2e-10 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 2e-10 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-10 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 2e-10 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-10 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-10 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 3e-10 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 3e-10 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 3e-10 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 3e-10 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 3e-10 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 3e-10 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 3e-10 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 4e-10 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 4e-10 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 4e-10 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 6e-10 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 3e-08 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 4e-10 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 6e-10 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 1e-08 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 4e-10 | ||
| 1p8t_A | 285 | Crystal Structure Of Nogo-66 Receptor Length = 285 | 4e-10 | ||
| 1p8t_A | 285 | Crystal Structure Of Nogo-66 Receptor Length = 285 | 3e-06 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 4e-10 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 4e-10 | ||
| 1ozn_A | 285 | 1.5a Crystal Structure Of The Nogo Receptor Ligand | 4e-10 | ||
| 1ozn_A | 285 | 1.5a Crystal Structure Of The Nogo Receptor Ligand | 3e-06 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 4e-10 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 4e-10 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 5e-10 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 5e-10 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 5e-10 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 5e-10 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 5e-10 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 5e-10 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 6e-10 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 6e-10 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 6e-10 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 6e-10 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 7e-10 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 7e-10 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 7e-10 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 7e-10 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 8e-10 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 8e-10 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 1e-09 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 1e-09 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 1e-09 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 1e-09 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 1e-09 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 1e-09 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-09 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 2e-09 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-09 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-09 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-09 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 2e-09 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 2e-09 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-09 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 2e-09 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 2e-09 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 2e-09 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-09 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 2e-09 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 2e-09 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-09 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 2e-09 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 2e-09 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 2e-09 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 2e-09 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 2e-09 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 2e-09 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-09 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-09 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-09 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-09 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 2e-09 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-09 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-09 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 3e-09 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-09 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 3e-09 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 3e-09 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 3e-09 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-09 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-09 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 3e-09 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 3e-09 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 3e-09 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 3e-09 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 3e-09 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 3e-09 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 3e-09 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 3e-09 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 3e-09 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 3e-09 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-09 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 4e-09 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 4e-09 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 4e-09 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 4e-09 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 5e-09 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 5e-09 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 5e-09 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 5e-09 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 5e-09 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 5e-09 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 5e-09 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 5e-09 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 5e-09 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 5e-09 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 6e-09 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 6e-09 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 6e-09 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 6e-09 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 6e-09 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 6e-09 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 6e-09 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 6e-09 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 6e-09 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 6e-09 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 6e-09 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 6e-09 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 6e-09 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 7e-09 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 7e-09 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 9e-09 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 1e-08 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-08 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 1e-08 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-08 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 1e-08 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-08 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-08 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 1e-08 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-08 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 1e-08 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 1e-08 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 1e-08 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 1e-08 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 1e-08 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-08 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 1e-08 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-08 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 1e-08 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 1e-08 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 1e-08 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-08 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 1e-08 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-08 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 2e-08 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-08 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 2e-08 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-08 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-08 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 2e-08 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-08 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-08 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 2e-08 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 2e-08 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-08 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 2e-08 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-08 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 2e-08 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 2e-08 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 2e-08 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 2e-08 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 2e-08 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 2e-08 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 5e-08 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 2e-06 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-08 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 2e-08 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 2e-08 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 2e-08 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 2e-08 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-08 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-08 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 2e-08 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-08 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 3e-08 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-08 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-08 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-08 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 3e-08 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 3e-08 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 3e-08 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 3e-08 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 3e-08 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 3e-08 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 3e-08 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 3e-08 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 3e-08 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 3e-08 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 3e-08 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 3e-08 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 3e-08 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 3e-08 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 3e-08 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 3e-08 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 4e-08 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 4e-08 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 4e-08 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-08 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-08 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-08 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-08 | ||
| 4fmz_A | 347 | Crystal Structure Of An Internalin (Inlf) From List | 4e-08 | ||
| 4fmz_A | 347 | Crystal Structure Of An Internalin (Inlf) From List | 7e-04 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 5e-08 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 5e-08 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 5e-08 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-08 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-08 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 5e-08 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-08 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 5e-08 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 5e-08 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 5e-08 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 5e-08 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 5e-08 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 5e-08 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 5e-08 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 5e-08 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 5e-08 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 5e-08 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 5e-08 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 5e-08 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 5e-08 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 5e-08 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 5e-08 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 5e-08 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 5e-08 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-08 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-08 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 5e-08 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 5e-08 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 5e-08 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 5e-08 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 6e-08 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-08 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 6e-08 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 6e-08 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 7e-08 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 7e-08 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 8e-08 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 8e-08 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 8e-08 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 8e-08 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 8e-08 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 8e-08 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 8e-08 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 8e-08 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 9e-08 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 9e-08 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 9e-08 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 9e-08 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-08 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 9e-08 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 9e-08 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 9e-08 | ||
| 1ziw_A | 680 | Human Toll-Like Receptor 3 Extracellular Domain Str | 1e-07 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 1e-07 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 1e-07 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 1e-07 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 1e-07 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 1e-07 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 1e-07 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 1e-07 | ||
| 3ulu_A | 694 | Structure Of Quaternary Complex Of Human Tlr3ecd Wi | 1e-07 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 1e-07 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 1e-07 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 1e-07 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 1e-07 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-07 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 1e-07 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 1e-07 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 1e-07 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 1e-07 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 1e-07 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 1e-07 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 1e-07 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 1e-07 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 1e-07 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 1e-07 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 1e-07 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 1e-07 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 1e-07 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 1e-07 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 1e-07 | ||
| 2a0z_A | 705 | The Molecular Structure Of Toll-like Receptor 3 Lig | 1e-07 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 1e-07 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 1e-07 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 1e-07 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 1e-07 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 1e-07 | ||
| 3cig_A | 697 | Crystal Structure Of Mouse Tlr3 Ectodomain Length = | 1e-07 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 1e-07 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-07 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-07 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 2e-07 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 2e-07 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 2e-07 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 2e-07 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-07 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 2e-07 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 2e-07 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-07 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 2e-07 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-07 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 2e-07 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 2e-07 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 2e-07 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-07 | ||
| 3m19_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 3e-07 | ||
| 3m19_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 3e-05 | ||
| 3m18_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 3e-07 | ||
| 3m18_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 3e-05 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 3e-07 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 3e-07 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 3e-07 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 3e-07 | ||
| 3e6j_A | 229 | Crystal Structure Of Variable Lymphocyte Receptor ( | 3e-07 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-07 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-07 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 3e-07 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 3e-07 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 3e-07 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 3e-07 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 3e-07 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 3e-07 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 3e-07 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 3e-07 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 3e-07 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-07 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 4e-07 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 4e-07 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 4e-07 | ||
| 3zyj_A | 440 | Netring1 In Complex With Ngl1 Length = 440 | 4e-07 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 4e-07 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-07 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 4e-07 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 4e-07 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 4e-07 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 4e-07 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 4e-07 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 4e-07 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 4e-07 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 4e-07 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 4e-07 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 4e-07 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 4e-07 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 4e-07 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 4e-07 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-07 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 4e-07 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-07 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 5e-07 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-07 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 5e-07 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 5e-07 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 5e-07 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 5e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 5e-07 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 5e-07 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 5e-07 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 5e-07 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 6e-07 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 6e-07 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 6e-07 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 6e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 6e-07 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 7e-07 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 7e-07 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 7e-07 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 7e-07 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 8e-07 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 8e-07 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 8e-07 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 8e-07 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 8e-07 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 9e-07 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 9e-07 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-06 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-06 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 1e-06 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 1e-06 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 1e-06 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 1e-06 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-06 | ||
| 3j0a_A | 844 | Homology Model Of Human Toll-Like Receptor 5 Fitted | 1e-06 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 1e-06 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 1e-06 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-06 | ||
| 2wfh_A | 193 | The Human Slit 2 Dimerization Domain D4 Length = 19 | 1e-06 | ||
| 3zyn_A | 321 | Crystal Structure Of The N-Terminal Leucine Rich Re | 1e-06 | ||
| 3zyn_A | 321 | Crystal Structure Of The N-Terminal Leucine Rich Re | 3e-05 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 1e-06 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 1e-06 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 1e-06 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 1e-06 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 2e-06 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 2e-06 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 2e-06 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-06 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 2e-06 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 2e-06 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 2e-06 | ||
| 3rfs_A | 272 | Design Of A Binding Scaffold Based On Variable Lymp | 2e-06 | ||
| 3rfs_A | 272 | Design Of A Binding Scaffold Based On Variable Lymp | 5e-06 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 2e-06 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 2e-06 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 2e-06 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 2e-06 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 2e-06 | ||
| 3zyo_A | 411 | Crystal Structure Of The N-Terminal Leucine Rich Re | 2e-06 | ||
| 3zyo_A | 411 | Crystal Structure Of The N-Terminal Leucine Rich Re | 6e-05 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 2e-06 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-06 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 3e-06 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 3e-06 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-06 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 3e-06 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 3e-06 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-06 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-06 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 4e-06 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 4e-06 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 4e-06 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-06 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 4e-06 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 4e-06 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 4e-06 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 5e-06 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 5e-06 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 5e-06 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 5e-06 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 5e-06 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 5e-06 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 5e-06 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 5e-06 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 5e-06 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 5e-06 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 6e-06 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 6e-06 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 6e-06 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-06 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 6e-06 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 6e-06 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 7e-06 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 7e-06 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 8e-06 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 8e-06 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 9e-06 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 9e-06 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 9e-06 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 9e-06 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 1e-05 | ||
| 2z7x_B | 520 | Crystal Structure Of The Tlr1-Tlr2 Heterodimer Indu | 1e-05 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-05 | ||
| 3b2d_A | 603 | Crystal Structure Of Human Rp105MD-1 Complex Length | 1e-05 | ||
| 3b2d_A | 603 | Crystal Structure Of Human Rp105MD-1 Complex Length | 5e-04 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-05 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-05 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 1e-05 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 1e-05 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 1e-05 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 1e-05 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 1e-05 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 1e-05 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 1e-05 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 1e-05 | ||
| 2o6s_A | 208 | Structural Diversity Of The Hagfish Variable Lympho | 1e-05 | ||
| 2o6s_A | 208 | Structural Diversity Of The Hagfish Variable Lympho | 7e-05 | ||
| 3t6q_A | 606 | Crystal Structure Of Mouse Rp105MD-1 Complex Length | 1e-05 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 1e-05 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 1e-05 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 1e-05 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 1e-05 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 1e-05 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 1e-05 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 1e-05 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 1e-05 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 1e-05 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 1e-05 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-05 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 2e-05 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-05 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 2e-05 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 2e-05 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 2e-05 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 2e-05 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-05 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-05 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 2e-05 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 2e-05 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 2e-05 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 2e-05 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 2e-05 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-05 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 2e-05 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-05 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 2e-05 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-05 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-05 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 2e-05 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 2e-05 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 2e-05 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 2e-05 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 2e-05 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 2e-05 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 2e-05 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 2e-05 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 2e-05 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 2e-05 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-05 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-05 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-05 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 2e-05 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 2e-05 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 2e-05 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 2e-05 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 2e-05 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 2e-05 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 2e-05 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 2e-05 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 2e-05 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 2e-05 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 2e-05 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-05 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 2e-05 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 2e-05 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 2e-05 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 2e-05 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 2e-05 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 2e-05 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-05 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 3e-05 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 3e-05 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 3e-05 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 3e-05 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 3e-05 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 3e-05 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 3e-05 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 3e-05 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 3e-05 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 3e-05 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 3e-05 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 3e-05 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 3e-05 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-05 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 3e-05 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 3e-05 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 3e-05 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-05 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 3e-05 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 3e-05 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 3e-05 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 3e-05 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 3e-05 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 3e-05 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-05 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 3e-05 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-05 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 3e-05 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 4e-05 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 4e-05 | ||
| 2id5_A | 477 | Crystal Structure Of The Lingo-1 Ectodomain Length | 4e-05 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 4e-05 | ||
| 2z66_A | 306 | Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 A | 4e-05 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 4e-05 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 4e-05 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 4e-05 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 5e-05 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 5e-05 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 5e-05 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 5e-05 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 6e-05 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 6e-05 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 6e-05 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 6e-05 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 6e-05 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 7e-05 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 7e-05 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 7e-05 | ||
| 1w8a_A | 192 | Third Lrr Domain Of Drosophila Slit Length = 192 | 7e-05 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 7e-05 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 7e-05 | ||
| 2z64_A | 599 | Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Comp | 7e-05 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 8e-05 | ||
| 3vq1_A | 606 | Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLE | 8e-05 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 9e-05 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 9e-05 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 9e-05 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 1e-04 | ||
| 3v47_A | 455 | Crystal Structure Of The N-Tetminal Fragment Of Zeb | 1e-04 | ||
| 3fxi_A | 605 | Crystal Structure Of The Human Tlr4-Human Md-2-E.Co | 1e-04 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 1e-04 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 1e-04 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 1e-04 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 1e-04 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-04 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 1e-04 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 1e-04 | ||
| 3a79_B | 562 | Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex Len | 1e-04 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 1e-04 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 2e-04 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 2e-04 | ||
| 4g8a_A | 635 | Crystal Structure Of Human Tlr4 Polymorphic Variant | 2e-04 | ||
| 4g8a_A | 635 | Crystal Structure Of Human Tlr4 Polymorphic Variant | 5e-04 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 2e-04 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 2e-04 | ||
| 3rfj_A | 279 | Design Of A Binding Scaffold Based On Variable Lymp | 2e-04 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 2e-04 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 2e-04 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 3e-04 | ||
| 2z63_A | 570 | Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 A | 3e-04 | ||
| 2z63_A | 570 | Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 A | 4e-04 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 3e-04 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 3e-04 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 3e-04 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 3e-04 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 3e-04 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 3e-04 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 3e-04 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 3e-04 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 4e-04 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 4e-04 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 4e-04 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 4e-04 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 4e-04 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 4e-04 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 4e-04 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 4e-04 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 5e-04 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 5e-04 | ||
| 2r9u_A | 174 | Crystal Structure Of Lamprey Variable Lymphocyte Re | 5e-04 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 5e-04 | ||
| 4fho_A | 231 | Crystal Structure Of An Internalin C2 (Inlc2) From | 5e-04 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 6e-04 | ||
| 3zyi_A | 452 | Netring2 In Complex With Ngl2 Length = 452 | 6e-04 | ||
| 2o6r_A | 177 | Structural Diversity Of The Hagfish Variable Lympho | 6e-04 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 6e-04 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 7e-04 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 7e-04 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 8e-04 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 9e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist Antibody Length = 286 | Back alignment and structure |
|
| >pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist Antibody Length = 286 | Back alignment and structure |
|
| >pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist Antibody Length = 286 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor Length = 285 | Back alignment and structure |
|
| >pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor Length = 285 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding Domain Reveals A Convergent Recognition Scaffold Mediating Inhibition Of Myelination Length = 285 | Back alignment and structure |
|
| >pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding Domain Reveals A Convergent Recognition Scaffold Mediating Inhibition Of Myelination Length = 285 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria Monocytogenes Str. 4b F2365 At 1.91 A Resolution Length = 347 | Back alignment and structure |
|
| >pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria Monocytogenes Str. 4b F2365 At 1.91 A Resolution Length = 347 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure Length = 680 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With Three Fabs (Form1) Length = 694 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand Binding Domain Length = 705 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain Length = 697 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R5.1 Length = 251 | Back alignment and structure |
|
| >pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R5.1 Length = 251 | Back alignment and structure |
|
| >pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R2.1 In Complex With Hen Egg Lysozyme Length = 251 | Back alignment and structure |
|
| >pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R2.1 In Complex With Hen Egg Lysozyme Length = 251 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr) Rbc36 In Complex With H-Trisaccharide Length = 229 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1 Length = 440 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into An Electron Microscopy Single Particle Reconstruction Length = 844 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4 Length = 193 | Back alignment and structure |
|
| >pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats Of Netrin-G Ligand-3 Length = 321 | Back alignment and structure |
|
| >pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats Of Netrin-G Ligand-3 Length = 321 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 272 | Back alignment and structure |
|
| >pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 272 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats And Immunoglobulin Domain Of Netrin-G Ligand-3 Length = 411 | Back alignment and structure |
|
| >pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats And Immunoglobulin Domain Of Netrin-G Ligand-3 Length = 411 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide Length = 520 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex Length = 603 | Back alignment and structure |
|
| >pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex Length = 603 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors B59 Length = 208 | Back alignment and structure |
|
| >pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors B59 Length = 208 | Back alignment and structure |
|
| >pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex Length = 606 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain Length = 477 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 306 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit Length = 192 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex Length = 599 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX Length = 606 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish Tlr5 In Complex With Salmonella Flagellin Length = 455 | Back alignment and structure |
|
| >pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps Ra Complex Length = 605 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex Length = 562 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g And T399i In Complex With Md-2 And Lps Length = 635 | Back alignment and structure |
|
| >pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g And T399i In Complex With Md-2 And Lps Length = 635 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 279 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 570 | Back alignment and structure |
|
| >pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 570 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor 2913 Ectodomain Length = 174 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From Listeria Monocytogenes Str. 4b F2365 At 1.90 A Resolution Length = 231 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2 Length = 452 | Back alignment and structure |
|
| >pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors B61 Length = 177 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1031 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-177 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-165 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-102 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-07 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-119 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-112 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-101 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-36 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-30 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 6e-17 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-113 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-85 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-102 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-101 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 4e-81 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-43 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 3e-94 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 1e-80 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-52 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 9e-14 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-93 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-89 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-81 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-55 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 6e-36 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 6e-31 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 5e-29 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-19 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 7e-87 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 9e-72 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 4e-69 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 8e-86 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 4e-75 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-70 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-33 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 1e-73 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 7e-68 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-67 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-64 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-60 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 6e-39 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-35 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-30 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 8e-65 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-61 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-59 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 4e-56 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 5e-09 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-64 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-63 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 1e-47 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 1e-42 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-61 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 4e-57 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 8e-39 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 5e-37 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 1e-59 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 4e-57 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 5e-55 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 5e-54 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 8e-54 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 1e-52 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 6e-51 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 6e-16 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 1e-53 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 1e-52 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 5e-50 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 6e-48 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 7e-40 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 7e-52 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 3e-51 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 4e-46 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-43 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-41 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-30 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-28 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-22 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 3e-51 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-50 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 4e-48 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-21 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 4e-51 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-50 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-49 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 7e-49 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-44 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-43 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 6e-50 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 5e-45 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 2e-42 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 4e-41 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 5e-41 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 4e-34 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 7e-22 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-47 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 5e-41 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-40 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 5e-40 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-39 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-33 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-17 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-08 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 3e-46 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 4e-46 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 1e-45 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 2e-45 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 3e-45 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 4e-45 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-42 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 8e-39 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-31 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 1e-19 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 2e-44 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 2e-44 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 2e-44 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 5e-44 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-43 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 6e-41 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 4e-35 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 3e-33 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 3e-30 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 2e-14 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 2e-43 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 6e-43 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 7e-43 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 8e-43 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-40 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-38 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 4e-30 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 7e-29 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-21 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 5e-42 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 5e-38 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 1e-37 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 5e-14 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 9e-42 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-41 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-40 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 6e-39 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-14 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 8e-08 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-39 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 6e-35 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-34 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 8e-34 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-29 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 7e-18 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 4e-39 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-38 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 5e-37 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 2e-35 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 4e-35 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 5e-35 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 3e-32 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-29 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-29 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-25 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 5e-36 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 8e-36 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-33 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-30 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 6e-30 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-10 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-05 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 5e-05 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 9e-36 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 2e-35 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-30 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 4e-30 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 6e-29 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 9e-29 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-28 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 2e-16 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-35 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-33 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-32 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-31 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-30 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 6e-35 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-33 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-32 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-30 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 5e-30 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 5e-10 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 3e-33 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 4e-33 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 8e-32 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 8e-30 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 6e-29 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 8e-26 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 5e-33 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-32 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 4e-32 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-31 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 6e-31 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 6e-30 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-29 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 1e-25 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 8e-19 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 4e-10 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 5e-32 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 2e-31 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 3e-15 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 9e-32 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 1e-31 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 4e-31 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 5e-31 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 6e-31 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 3e-30 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 3e-30 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 6e-30 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 1e-29 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 2e-29 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 2e-29 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 5e-29 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 1e-28 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 5e-28 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 3e-27 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 4e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 6e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-04 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 8e-29 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 8e-29 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 1e-28 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 1e-28 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 1e-28 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 2e-28 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 3e-28 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 3e-28 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 3e-28 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 3e-28 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 4e-28 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 5e-28 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 6e-28 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 8e-28 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 1e-27 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 1e-27 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 1e-27 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 1e-27 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 1e-27 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 2e-27 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 3e-27 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 3e-27 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 4e-27 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 5e-27 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 5e-27 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 6e-27 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 6e-27 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 7e-27 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 7e-27 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 7e-27 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 1e-26 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 1e-26 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 1e-26 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 2e-26 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 9e-26 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 5e-25 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 7e-24 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-23 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-23 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 5e-19 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-15 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-11 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 9e-26 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-24 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-23 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-23 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-21 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 7e-21 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-20 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 6e-17 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 1e-25 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 1e-25 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 2e-25 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 2e-25 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-25 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 1e-24 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 7e-24 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 8e-24 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-19 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 2e-25 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 3e-25 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 3e-25 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 3e-25 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 4e-25 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 5e-25 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 6e-25 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 7e-25 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 8e-25 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 9e-25 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 9e-25 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 1e-24 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 1e-24 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 1e-24 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 1e-24 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-23 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-22 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-22 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-21 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-21 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-20 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 5e-15 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 2e-24 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 2e-24 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 4e-24 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 5e-24 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 8e-24 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 3e-19 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 6e-18 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 4e-17 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 1e-15 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-14 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-13 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 3e-12 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 5e-09 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-07 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 9e-24 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 1e-23 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 1e-23 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 1e-23 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 2e-23 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 2e-23 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 2e-23 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 3e-23 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 3e-23 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 3e-23 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 3e-23 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 4e-23 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 6e-23 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 6e-23 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 8e-23 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 1e-22 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 8e-20 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-19 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-19 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 5e-10 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 1e-22 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 2e-22 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 2e-22 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 3e-22 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 3e-22 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-22 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-21 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 4e-21 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-19 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 5e-19 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 4e-16 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-15 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-12 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 6e-08 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 4e-22 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 5e-22 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 5e-22 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 7e-22 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 8e-22 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 9e-22 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 3e-21 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 3e-21 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 1e-19 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 4e-13 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 9e-22 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 9e-22 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 1e-21 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 6e-21 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 3e-20 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 3e-14 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 1e-21 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 1e-21 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-21 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 1e-21 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-21 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 1e-21 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 1e-21 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 1e-21 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 2e-21 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 4e-21 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 4e-21 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 7e-21 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-20 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 3e-20 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 7e-20 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 9e-18 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 4e-17 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 4e-21 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 5e-21 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 5e-21 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 7e-21 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 7e-21 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 9e-21 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 1e-20 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 1e-20 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 2e-20 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 7e-20 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 2e-19 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 3e-19 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 3e-19 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 5e-19 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 5e-19 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 1e-18 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 1e-18 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 2e-18 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 2e-18 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 2e-18 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 3e-18 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 5e-18 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 5e-18 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 1e-16 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-15 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 4e-15 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-10 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 6e-18 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 8e-18 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-17 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 3e-16 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 1e-15 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 1e-13 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 7e-13 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 1e-05 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 1e-17 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-14 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 5e-14 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 8e-13 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 8e-13 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 8e-13 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 1e-12 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-09 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 9e-09 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-08 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 1e-17 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 1e-17 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-17 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-16 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 6e-16 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 6e-15 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-12 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 2e-17 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-17 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 6e-17 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-16 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 4e-16 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 5e-14 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-13 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 4e-12 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 3e-17 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 2e-16 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-15 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 3e-14 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-13 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 2e-11 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 3e-11 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 5e-10 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 8e-08 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-16 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-15 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-12 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-12 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 6e-16 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-15 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 5e-15 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 3e-11 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 6e-11 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-08 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 8e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 4e-06 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 2e-15 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 9e-12 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 6e-10 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-08 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 6e-08 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-07 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 7e-06 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 2e-15 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 2e-14 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 3e-12 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 2e-10 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-09 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 8e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 6e-06 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-05 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 3e-15 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 4e-15 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 4e-15 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-13 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 4e-12 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 8e-12 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 1e-11 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 3e-09 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 4e-15 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 4e-15 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 2e-13 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 3e-13 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 4e-13 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 7e-13 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 9e-13 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 9e-13 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 1e-12 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 1e-12 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-12 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-12 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 4e-12 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-11 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 8e-10 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 9e-08 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 8e-06 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 3e-05 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 2e-12 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 2e-12 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 3e-12 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 3e-12 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 1e-10 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 1e-09 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 4e-08 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 6e-07 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 5e-06 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 3e-12 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 4e-11 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 6e-11 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 4e-10 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 9e-10 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 3e-06 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 4e-06 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 8e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-12 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 4e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 4e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 5e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 9e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 5e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-04 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 5e-12 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 7e-12 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 2e-11 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 2e-11 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 2e-11 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 2e-11 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 3e-11 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 5e-11 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 6e-11 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 9e-11 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 4e-10 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 4e-10 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 6e-10 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 2e-05 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 7e-10 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-09 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 3e-09 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-07 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 3e-05 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 4e-04 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 8e-10 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 9e-10 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 1e-09 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 1e-09 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 2e-09 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 4e-09 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 5e-09 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 3e-08 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 5e-08 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 5e-04 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 4e-09 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 4e-09 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 4e-09 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 4e-09 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 5e-09 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 5e-09 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 1e-06 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 4e-05 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 3e-04 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 6e-09 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-09 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-08 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 8e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-05 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 9e-04 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 8e-09 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 1e-08 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 2e-08 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 3e-07 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 4e-07 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 2e-06 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 1e-05 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 2e-08 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 3e-08 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 3e-08 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 3e-08 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 3e-08 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 3e-08 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 3e-08 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 3e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 9e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 9e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-07 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-07 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-05 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-05 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-04 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 4e-08 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 2e-07 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 1e-06 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 3e-06 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 9e-08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 4e-07 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 4e-07 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 4e-06 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 1e-04 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 1e-07 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 1e-07 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 2e-07 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 2e-07 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 2e-07 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 4e-07 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 5e-07 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 2e-06 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 3e-05 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 6e-07 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 6e-07 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 1e-06 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 1e-06 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 1e-06 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 1e-06 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 2e-06 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 2e-06 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 3e-06 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 5e-06 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 7e-06 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 7e-06 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 6e-05 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 8e-06 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 9e-06 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 2e-05 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 2e-05 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 3e-05 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 5e-05 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 8e-05 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 1e-04 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 4e-04 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 535 bits (1380), Expect = e-177
Identities = 180/618 (29%), Positives = 277/618 (44%), Gaps = 23/618 (3%)
Query: 80 SISLSSLGLNGTF--QDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQL 137
+ LS+ ++G L +L +S N + G++ +S L LD+ +N
Sbjct: 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNF 212
Query: 138 SGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLS 197
S IP +G + L+ L N L G I + + +L + N F G IPP L
Sbjct: 213 STGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLK 269
Query: 198 NLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256
+L YL L N G IP + G ++L+ LDLS N G++P + S L L L N+
Sbjct: 270 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 329
Query: 257 LFGFIP-SVIGNLKSLFELDLSENQLFGSIPLSFSNLS-SLTLMSLFNNSLSGSIPPTQG 314
G +P + ++ L LDLS N+ G +P S +NLS SL + L +N+ SG I P
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 315 N--LEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLEL 372
L EL L N G IPP++ N S L +L+L N G +P+ +G L L L+L
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449
Query: 373 CRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEA 432
N L G IP + + L + + N L G IP N T+L + + N L G++ +
Sbjct: 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 509
Query: 433 FGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDL 492
G NL L LS N+ G I + L + + N G+IP + S +
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS----GKI 565
Query: 493 SSNHIVGKIPVQFEKLFSLNKLIL--NLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550
++N I GK V + + NL + G + L+ ++++
Sbjct: 566 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625
Query: 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEEL 610
+ N + +L++S N + IP E + +L L+L HN + G IP ++ ++ L L
Sbjct: 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 685
Query: 611 NLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFK---DGLMEGNKGLCGNFK 667
+LS N L IP + L+ ID++ N L GPIP F+ N GLCG
Sbjct: 686 DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY-- 743
Query: 668 ALPSCDAFMSHEQTSRKK 685
LP CD + ++
Sbjct: 744 PLPRCDPSNADGYAHHQR 761
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 503 bits (1297), Expect = e-165
Identities = 186/646 (28%), Positives = 278/646 (43%), Gaps = 56/646 (8%)
Query: 16 TFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLV 75
+F + S +E + L+++K L ++N LL W+ + +PCT+ G+ C
Sbjct: 1 SFQASPSQSLYREIHQLISFKDVLPDKN----LLPDWS------SNKNPCTFDGVTCRD- 49
Query: 76 GRVISISLSSLGLNGTFQDF--SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLG 133
+V SI LSS LN F S S L L LS + + G++ + L +LDL
Sbjct: 50 DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSG-FKCSASLTSLDLS 108
Query: 134 NNQLSGVIP--QEIGHLTCLRMLYFDVNHLHGSIPLEIG-KLSLINVLTLCHNNFSGRIP 190
N LSG + +G + L+ L N L + G KL+ + VL L N+ SG
Sbjct: 109 RNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANV 168
Query: 191 PSL---GNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL 247
L +L ++ N + G + + +L LD+S N IP L + S L
Sbjct: 169 VGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSAL 225
Query: 248 GILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307
L + N L G I L L++S NQ G IP L SL +SL N +G
Sbjct: 226 QHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTG 283
Query: 308 SIPPT-QGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE-IGYLK 365
IP G + L+ L L N G +PP G+ S L +L L N F G +P + + ++
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMR 343
Query: 366 SLSKLELCRNHLSGVIPHSIGNLT-KLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNN 424
L L+L N SG +P S+ NL+ L+ +++ N+ G I +
Sbjct: 344 GLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK---------- 393
Query: 425 LFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS 484
L L L N G+I N +L + + S N + G+IP +G
Sbjct: 394 ------------NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Query: 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANK 544
SKL+ L L N + G+IP + + +L LIL+ N L+G +P + T L ++ LS N+
Sbjct: 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501
Query: 545 LSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNM 604
L+ IPK +G L L L LSNN F+ IP E L LDL+ N G IP +
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561
Query: 605 ESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN--ELQGPIPNS 648
++ N + + A N E QG
Sbjct: 562 SGK----IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 603
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 337 bits (866), Expect = e-102
Identities = 119/394 (30%), Positives = 177/394 (44%), Gaps = 12/394 (3%)
Query: 64 PCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISN 123
P L + LS +G + + L+ L+LS N G I P +
Sbjct: 335 PMDTLLKMRGLK----VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ 390
Query: 124 --LSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181
+ L+ L L NN +G IP + + + L L+ N+L G+IP +G LS + L L
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSL 241
N G IP L + L L L+ N L G IP+ + N +L+ + LS N+L G IP +
Sbjct: 451 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510
Query: 242 ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301
L NL IL L NS G IP+ +G+ +SL LDL+ N G+IP + S +
Sbjct: 511 GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK----IA 566
Query: 302 NNSLSGSIPPTQGNLEALSELGLYIN--QLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPN 359
N ++G N E N + G+ + LS+ + + G
Sbjct: 567 ANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP 626
Query: 360 EIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLR 419
S+ L++ N LSG IP IG++ L ++N+ N + G IP +L L L
Sbjct: 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 686
Query: 420 FNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEI 453
+ N L G++ +A LT +DLS NNL G I
Sbjct: 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 1e-07
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 582 HLSELDLSHNFLQ---GEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAY 638
++ +DLS L + + ++ LE L LS++++ + G F+ SL+ +D++
Sbjct: 51 KVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSG-FKCSASLTSLDLSR 109
Query: 639 NELQGPIPNSTAF 651
N L GP+ T+
Sbjct: 110 NSLSGPVTTLTSL 122
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 380 bits (978), Expect = e-119
Identities = 138/601 (22%), Positives = 229/601 (38%), Gaps = 32/601 (5%)
Query: 91 TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTC 150
+F+ + L L++ N + P L L+ L+L +N+LS + + T
Sbjct: 39 RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTN 98
Query: 151 LRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLF 210
L L+ N + K + L L HN S + L NL L L+NN +
Sbjct: 99 LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQ 158
Query: 211 GSIPNVMGNLN--SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIG-- 266
+ SL L+LS NQ++ P + L L+L L + +
Sbjct: 159 ALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLE 218
Query: 267 -NLKSLFELDLSENQLFGSIPLSFSNL--SSLTLMSLFNNSLSGSIPPTQGNLEALSELG 323
S+ L LS +QL + +F L ++LT++ L N+L+ + L L
Sbjct: 219 LANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFF 278
Query: 324 LYINQLDGVIPPSIGNLSSLRTLYLYDNGFY---------GLVPNEIGYLKSLSKLELCR 374
L N + + S+ L ++R L L + + +LK L L +
Sbjct: 279 LEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMED 338
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHL--FGLIPKSFRNL--TSLERLRFNQNNLFGKVY 430
N + G+ + L L +++ + L ++F +L + L L +N +
Sbjct: 339 NDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIES 398
Query: 431 EAFGDHPNLTFLDLSQNNLYGEISFN-WRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQV 489
+AF +L LDL N + E++ WR + S N LQ
Sbjct: 399 DAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQR 458
Query: 490 LDLSSNHI--VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS 547
L L + V P F+ L +L L L+ N ++ L +L+ LDL N L+
Sbjct: 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLAR 518
Query: 548 --------SIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPP 599
+ LS LH LNL +N F+ F+ L L +DL N L
Sbjct: 519 LWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPAS 578
Query: 600 QICNMESLEELNLSHNNLFDLIPGCFEE-MRSLSRIDIAYNELQGPIPNSTAFKDGLMEG 658
N SL+ LNL N + + F R+L+ +D+ +N + F + + E
Sbjct: 579 VFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINET 638
Query: 659 N 659
+
Sbjct: 639 H 639
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 361 bits (928), Expect = e-112
Identities = 138/577 (23%), Positives = 214/577 (37%), Gaps = 34/577 (5%)
Query: 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLH 162
+ S L +P + + + L+L +NQL + + L L N +
Sbjct: 6 HEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS 62
Query: 163 GSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNS 222
P KL ++ VL L HN S + +NL L+L +NS+ N +
Sbjct: 63 KLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKN 122
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLK--SLFELDLSENQ 280
L LDLS N L + + L NL L L N + + SL +L+LS NQ
Sbjct: 123 LITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQLDGVIPPSI 337
+ P F + L + L N L S+ ++ L L +QL +
Sbjct: 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242
Query: 338 GNL--SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
L ++L L L N + + +L L L N++ + HS+ L + +N
Sbjct: 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN 302
Query: 396 MCEN---------HLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
+ + L + SF+ L LE L N++ G F NL +L LS
Sbjct: 303 LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSN 362
Query: 447 NNLYGEI----SFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502
+ +F L N + N I L+VLDL N I ++
Sbjct: 363 SFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422
Query: 503 VQ-FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS--SIPKSMGNLSKL 559
Q + L ++ ++ L+ N+ F + LQ L L L + S P L L
Sbjct: 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482
Query: 560 HYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ--------GEIPPQICNMESLEELN 611
L+LSNN + E L L LDL HN L G + + L LN
Sbjct: 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILN 542
Query: 612 LSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS 648
L N ++ F+++ L ID+ N L +
Sbjct: 543 LESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV 579
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 331 bits (851), Expect = e-101
Identities = 119/576 (20%), Positives = 194/576 (33%), Gaps = 36/576 (6%)
Query: 82 SLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQL 137
L L L D +F+ +L L+L N + L LDL +N L
Sbjct: 74 MLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL 133
Query: 138 SGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN--VLTLCHNNFSGRIPPSLGN 195
S L L+ L N + E+ + + L L N P
Sbjct: 134 SSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHA 193
Query: 196 LSNLAYLYLNNNSLFGSIPNVMG---NLNSLSILDLSQNQLRGSIPFSLANL--SNLGIL 250
+ L L+LNN L S+ + S+ L LS +QL + + L +NL +L
Sbjct: 194 IGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTML 253
Query: 251 YLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIP 310
L N+L L L L N + S L ++ ++L + SI
Sbjct: 254 DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSIS 313
Query: 311 PTQ---------GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEI 361
L+ L L + N + G+ L +L+ L L ++
Sbjct: 314 LASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNE 373
Query: 362 G----YLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKS-FRNLTSLE 416
L L L +N +S + + L L ++++ N + + +R L ++
Sbjct: 374 TFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIF 433
Query: 417 RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG--EISFNWRNFPKLGTFNASMNNIY 474
+ + N +F P+L L L + L ++ L + S NNI
Sbjct: 434 EIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA 493
Query: 475 GSIPPEIGDSSKLQVLDLSSNHI--------VGKIPVQFEKLFSLNKLILNLNQLSGGVP 526
+ KL++LDL N++ G + L L+ L L N
Sbjct: 494 NINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPV 553
Query: 527 LEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEK-LIHLSE 585
F L EL+ +DL N L++ N L LNL N F +L+E
Sbjct: 554 EVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTE 613
Query: 586 LDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLI 621
LD+ N + + E + + L
Sbjct: 614 LDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHY 649
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 2e-36
Identities = 57/262 (21%), Positives = 92/262 (35%), Gaps = 17/262 (6%)
Query: 69 GIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLR 128
F L G + + L + + ++ + LS N + + L+
Sbjct: 399 DAFSWL-GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQ 457
Query: 129 ALDLGNNQLSGV--IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFS 186
L L L V P L L +L N++ + L + +L L HNN +
Sbjct: 458 RLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA 517
Query: 187 --------GRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP 238
G L LS+L L L +N V +L L I+DL N L
Sbjct: 518 RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577
Query: 239 FSLANLSNLGILYLYKNSLFGFIPSVIG-NLKSLFELDLSENQLFGSIP-----LSFSNL 292
N +L L L KN + V G ++L ELD+ N + +++ N
Sbjct: 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE 637
Query: 293 SSLTLMSLFNNSLSGSIPPTQG 314
+ + L ++ L + P G
Sbjct: 638 THTNIPELSSHYLCNTPPHYHG 659
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 3e-30
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 3/165 (1%)
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
+V D S + ++P ++ L L NQL F ++L LD+ N +S
Sbjct: 6 HEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS 62
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMES 606
P+ L L LNL +N+ + F +L+EL L N +Q ++
Sbjct: 63 KLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKN 122
Query: 607 LEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAF 651
L L+LSHN L G ++ +L + ++ N++Q
Sbjct: 123 LITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDI 167
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 6e-17
Identities = 35/195 (17%), Positives = 60/195 (30%), Gaps = 25/195 (12%)
Query: 69 GIFCNLVGRVISISLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVL--------YGN 116
F L +L+ L L+ D L L+L N L G
Sbjct: 474 SPFQPLR------NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG 527
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
+ LS L L+L +N + + L L+++ +N+L+ +
Sbjct: 528 PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLK 587
Query: 177 VLTLCHNNFSGRIPPSLG-NLSNLAYLYLNNNSLFGSIPNVMG-----NLNSLSILDLSQ 230
L L N + G NL L + N + ++ N +I +LS
Sbjct: 588 SLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELS- 646
Query: 231 NQLRGSIPFSLANLS 245
+ + P
Sbjct: 647 SHYLCNTPPHYHGFP 661
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 363 bits (934), Expect = e-113
Identities = 98/649 (15%), Positives = 199/649 (30%), Gaps = 76/649 (11%)
Query: 15 LTFSYNVSSDSTKESYALLNWKTSLQNQN-----PNSSLLSSWTLYPANATKISPCTW-- 67
+ + +++ K+ AL +L +N + ++W W
Sbjct: 18 VPIKLSRTAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWN------FNKELDMWGA 71
Query: 68 -FGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGN----IPPQIS 122
G+ N GRV +SL G +G D + L L L + N P IS
Sbjct: 72 QPGVSLNSNGRVTGLSLEGFGASGRVPD-AIGQLTELEVLALGSHGEKVNERLFGPKGIS 130
Query: 123 NLSKLRALDLGNNQLSGVIPQEIGHLTC--LRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180
L + + SI +
Sbjct: 131 ANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQ 190
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
NN + + ++ L+ L Y+ N+ + +
Sbjct: 191 LSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY-----KTEDLK 244
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL--------FGSIPLSFSNL 292
NL +L + +Y +P+ + L + ++++ N+
Sbjct: 245 WDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVG 304
Query: 293 SSLTLMSLFNNSL-SGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
+ ++ + N+L + + + ++ L L NQL+G P+ G+ L +L L N
Sbjct: 305 EKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEG-KLPAFGSEIKLASLNLAYN 363
Query: 352 GFYGLVPNEIGYLKSLSKLELCRNHLSGV-IPHSIGNLTKLVLVNMCENHL-------FG 403
+ N G+ + + L N L + +++ + ++ N + F
Sbjct: 364 QITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKL 463
+ + ++ + + N + E F L+ ++L N L PK
Sbjct: 424 PLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNML--------TEIPK- 474
Query: 464 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP--VQFEKLFSLNKLILNLNQL 521
N ++ L +DL N + + + L L + L+ N
Sbjct: 475 --------NSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSF 525
Query: 522 SGGVPLEFGSLTELQYL------DLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
S P + + + L+ D N+ P+ + L L + +N +
Sbjct: 526 S-KFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNE 583
Query: 576 EFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGC 624
+ ++S LD+ N +C L ++ D I GC
Sbjct: 584 KI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQD-IRGC 629
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 288 bits (738), Expect = 2e-85
Identities = 79/492 (16%), Positives = 152/492 (30%), Gaps = 51/492 (10%)
Query: 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRG----SI 237
+ + + SL + + L L G +P+ +G L L +L L + +
Sbjct: 66 LDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFG 125
Query: 238 PFSLANLSNLGILYLYKNSLFGFIPSVIGNLK--SLFELDLSENQLFGSIPLSFSNLSSL 295
P ++ + + L + ++ + SI S
Sbjct: 126 PKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185
Query: 296 TLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYG 355
T + +N+++ + L L + + + + Y
Sbjct: 186 TQIGQLSNNIT-FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQ-----YK 239
Query: 356 LVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL--IPKSFRNLT 413
+ LK L+ +E+ +P + L ++ L+N+ N + ++ L
Sbjct: 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALA 299
Query: 414 SLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL-YGEISFNWRNFPKLGTFNASMNN 472
+ + + NNL + + + KLG N
Sbjct: 300 DAPVGE------------------KIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQ 341
Query: 473 IYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVP-LEFGS 531
+ G P G KL L+L+ N I + L N+L + S
Sbjct: 342 LEG-KLPAFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKS 400
Query: 532 LTELQYLDLSANKLSS-------SIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS 584
++ + +D S N++ S + + + +NLSNNQ + F LS
Sbjct: 401 VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLS 460
Query: 585 ELDLSHNFLQG-------EIPPQICNMESLEELNLSHNNLFDLIPG-CFEEMRSLSRIDI 636
++L N L + N L ++L N L L + L ID+
Sbjct: 461 SINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDL 520
Query: 637 AYNELQGPIPNS 648
+YN P
Sbjct: 521 SYNSFSK-FPTQ 531
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 331 bits (851), Expect = e-102
Identities = 116/538 (21%), Positives = 187/538 (34%), Gaps = 29/538 (5%)
Query: 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVN 159
L+LS N L + +L+ LDL ++ + L+ L L N
Sbjct: 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86
Query: 160 HLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSL-FGSIPNVMG 218
+ LS + L N + +G+L L L + +N + +P
Sbjct: 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS 146
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGI----LYLYKNSLFGFIPSVIGNLKSLFEL 274
NL +L LDLS N+++ L L + + L L N + P + L +L
Sbjct: 147 NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKL 205
Query: 275 DLSENQLFGSIP-LSFSNLSSLTLMSLFNNSLSGS------IPPTQGNLEALSELGLYIN 327
L N ++ L+ L + L L L+ +
Sbjct: 206 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265
Query: 328 QLD---GVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS 384
LD I L+++ + L + Y LEL
Sbjct: 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLK 323
Query: 385 IGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE--RLRFNQNNLFGKVYEAFGDHPNLTFL 442
+ +L +L G S +L SLE L N + G ++ +L +L
Sbjct: 324 LKSLKRLTF-----TSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYL 378
Query: 443 DLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI-GDSSKLQVLDLSSNHIVGKI 501
DLS N + +S N+ +L + +N+ + L LD+S H
Sbjct: 379 DLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 437
Query: 502 PVQFEKLFSLNKLILNLNQLSGGVPLE-FGSLTELQYLDLSANKLSSSIPKSMGNLSKLH 560
F L SL L + N + F L L +LDLS +L P + +LS L
Sbjct: 438 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497
Query: 561 YLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNME-SLEELNLSHNNL 617
LN+S+N F ++ L L LD S N + ++ + SL LNL+ N+
Sbjct: 498 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 555
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 330 bits (848), Expect = e-101
Identities = 115/568 (20%), Positives = 201/568 (35%), Gaps = 33/568 (5%)
Query: 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNH 160
P++ Y + N IP + + LDL N L + L++L
Sbjct: 8 PNITYQCMELNFY--KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 63
Query: 161 LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220
+ LS ++ L L N + LS+L L +L +G+L
Sbjct: 64 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 123
Query: 221 NSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL----FELD 275
+L L+++ N ++ +P +NL+NL L L N + + + L + LD
Sbjct: 124 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLD 183
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPT-QGNLEALSELGLYINQLDGVI- 333
LS N + P +F + L ++L NN S ++ T L L L + +
Sbjct: 184 LSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 242
Query: 334 --PPSIGNLSSLRTLYLYDN------GFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI 385
L L L + + + + + L ++S L + V S
Sbjct: 243 LEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFS- 301
Query: 386 GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLS 445
+ + ++L L N F + D P+L FLDLS
Sbjct: 302 -YNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF-----SEVDLPSLEFLDLS 355
Query: 446 QNNLY--GEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV 503
+N L G S + L + S N + + +L+ LD +++
Sbjct: 356 RNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEF 414
Query: 504 Q-FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSI-PKSMGNLSKLHY 561
F L +L L ++ F L+ L+ L ++ N + P L L +
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLI 621
L+LS Q PT F L L L++SHN + SL+ L+ S N++
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 534
Query: 622 PGCFEEM-RSLSRIDIAYNELQGPIPNS 648
+ SL+ +++ N+ +
Sbjct: 535 KQELQHFPSSLAFLNLTQNDFACTCEHQ 562
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 275 bits (705), Expect = 4e-81
Identities = 106/495 (21%), Positives = 182/495 (36%), Gaps = 30/495 (6%)
Query: 173 SLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQ 232
+ N+ C +IP +L + L L+ N L + L +LDLS+ +
Sbjct: 6 VVPNITYQCMELNFYKIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 63
Query: 233 LRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNL 292
++ + +LS+L L L N + L SL +L E L +L
Sbjct: 64 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 123
Query: 293 SSLTLMSLFNNSL-SGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLR----TLY 347
+L +++ +N + S +P NL L L L N++ + + L + +L
Sbjct: 124 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLD 183
Query: 348 LYDNGFYGLVPNEIGYLKSLSKLELCRNHLSG-VIPHSIGNLTKLVLVNMCENHLFG--- 403
L N + P + L KL L N S V+ I L L + +
Sbjct: 184 LSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 242
Query: 404 ---LIPKSFRNLTSL--ERLRFNQNNLF-GKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
+ L +L E R + + + + F N++ L + F+
Sbjct: 243 LEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFS- 301
Query: 458 RNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILN 517
G P L+ L +SN L SL L L+
Sbjct: 302 -YNFGWQHLELVNCKF-GQFPTLK--LKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLS 355
Query: 518 LNQLS--GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
N LS G T L+YLDLS N + ++ + L +L +L+ ++
Sbjct: 356 RNGLSFKGCCSQSDFGTTSLKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEF 414
Query: 576 E-FEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLI-PGCFEEMRSLSR 633
F L +L LD+SH + + SLE L ++ N+ + P F E+R+L+
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 634 IDIAYNELQGPIPNS 648
+D++ +L+ P +
Sbjct: 475 LDLSQCQLEQLSPTA 489
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 1e-43
Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 11/269 (4%)
Query: 80 SISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLY--GNIPPQISNLSKLRALDLGNNQL 137
++ +S F S P L +L+LS N L G + L+ LDL N +
Sbjct: 329 RLTFTSNKGGNAF---SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 385
Query: 138 SGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPSLGNL 196
+ L L L F ++L + L + L + H + L
Sbjct: 386 IT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 444
Query: 197 SNLAYLYLNNNSLFGSI-PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN 255
S+L L + NS + P++ L +L+ LDLSQ QL P + +LS+L +L + N
Sbjct: 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Query: 256 SLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNL-SSLTLMSLFNNSLSGSIPPT-- 312
+ F L SL LD S N + S + SSL ++L N + +
Sbjct: 505 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSF 564
Query: 313 QGNLEALSELGLYINQLDGVIPPSIGNLS 341
++ +L + + +++ P +
Sbjct: 565 LQWIKDQRQLLVEVERMECATPSDKQGMP 593
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 318 bits (817), Expect = 3e-94
Identities = 95/575 (16%), Positives = 187/575 (32%), Gaps = 52/575 (9%)
Query: 106 LNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSI 165
N ++ + N ++ L L G +P IG LT L++L F + S
Sbjct: 304 FNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSG 363
Query: 166 PLEIGK-------LSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMG 218
L + + + + + L L N + +
Sbjct: 364 RLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRI 423
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
+L I +L+ N++ I ++ L+ L I+Y + +V + +
Sbjct: 424 SLKDTQIGNLT-NRI-TFISKAIQRLTKLQIIYFANSPFTYDNIAV-----DWEDANSDY 476
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV------ 332
+ + + LS+SNL LT + L+N +P +L L L + N+
Sbjct: 477 AKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD 536
Query: 333 ---IPPSIGNLSSLRTLYLYDNGFYGL-VPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL 388
+ ++ Y+ N + + L L+ N + + G
Sbjct: 537 WTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR--HLEAFGTN 594
Query: 389 TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFG-KVYEAFGDHPNLTFLDLSQN 447
KL + + N + + +E L F+ N L + +D S N
Sbjct: 595 VKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYN 654
Query: 448 NLYGE-----ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI----- 497
+ E S + T S N I S + + LS+N +
Sbjct: 655 KIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPE 714
Query: 498 --VGKIPVQFEKLFSLNKLILNLNQLSGGVP--LEFGSLTELQYLDLSANKLSSSIPKSM 553
+ ++ + L + L N+L+ + +L L +D+S N SS P
Sbjct: 715 NSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCF-SSFPTQP 772
Query: 554 GNLSKLHYLNL------SNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESL 607
N S+L + N+ + PT L +L + N ++ ++ ++ L
Sbjct: 773 LNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKL--TPQL 829
Query: 608 EELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
L+++ N + + Y++ Q
Sbjct: 830 YILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 280 bits (719), Expect = 1e-80
Identities = 74/538 (13%), Positives = 161/538 (29%), Gaps = 73/538 (13%)
Query: 81 ISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV 140
+ ++ L +L + + N P++ + K + L + Q+ +
Sbjct: 376 SEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN--PEMKPIKKDSRISLKDTQIGNL 433
Query: 141 ------IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLG 194
I + I LT L+++YF + + + + S
Sbjct: 434 TNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDAN-----SDYAKQYENEELSWS 488
Query: 195 NLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYK 254
NL +L + L N +P+ + +L L L+++ N+ A+ +
Sbjct: 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGIS-AAQLKADWTR-------- 539
Query: 255 NSLFGFIPSVIGNLKSLFELDLSENQLFG-SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ 313
+ + + N L S + L L+ +N +
Sbjct: 540 ------LADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKV--RHLEAF 591
Query: 314 GNLEALSELGLYINQLDGVIPPSIG-NLSSLRTLYLYDNGFYGLVPN-EIGYLKSLSKLE 371
G L++L L NQ++ IP + L N + + + ++
Sbjct: 592 GTNVKLTDLKLDYNQIEE-IPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVD 650
Query: 372 LCRNHLSGVIPH-----SIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL- 425
N + + V + N + + F + + + + N +
Sbjct: 651 FSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT 710
Query: 426 ------FGKVYEAFGDHPNLTFLDLSQNNLYG---EISFNWRNFPKLGTFNASMNNIYGS 476
+ + LT +DL N L + P L + S N S
Sbjct: 711 SIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRAT--TLPYLSNMDVSYNCF-SS 767
Query: 477 IPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQ 536
P + +SS+L+ + N++ P + L
Sbjct: 768 FPTQPLNSSQLKAFGIRHQ------------------RDAEGNRILRQWPTGITTCPSLI 809
Query: 537 YLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
L + +N + + + + +L+ L++++N T I L ++ Q
Sbjct: 810 QLQIGSNDI-RKVDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 198 bits (504), Expect = 2e-52
Identities = 66/409 (16%), Positives = 137/409 (33%), Gaps = 25/409 (6%)
Query: 268 LKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYIN 327
LK+++E +N + S ++ + S + + N ++ L L
Sbjct: 274 LKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGF 333
Query: 328 QLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG- 386
G +P +IG L+ L+ L + + E ++ +
Sbjct: 334 GAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLD 393
Query: 387 ---NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF-NQNNLFGKVYEAFGDHPNLTFL 442
L L+ N + P + SL+ + N N + +A L +
Sbjct: 394 YDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQII 453
Query: 443 DLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502
+ + + N+ Y + + L ++L + + ++P
Sbjct: 454 YFANSPFTYDN-----IAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLP 508
Query: 503 VQFEKLFSLNKLILNLNQLSG---------GVPLEFGSLTELQYLDLSANKLSS-SIPKS 552
L L L + N+ + + + ++Q + N L S
Sbjct: 509 DFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASAS 568
Query: 553 MGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQIC-NMESLEELN 611
+ + KL L+ +N+ H F + L++L L +N ++ EIP C + +E L
Sbjct: 569 LQKMVKLGLLDCVHNKVRH--LEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLG 625
Query: 612 LSHNNLFDLIPGC-FEEMRSLSRIDIAYNELQGPIPNSTAFKDGLMEGN 659
SHN L + + + + +D +YN++ N + D N
Sbjct: 626 FSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 9e-14
Identities = 18/207 (8%), Positives = 51/207 (24%), Gaps = 30/207 (14%)
Query: 469 SMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE 528
+ I + + LD + + N L+ ++
Sbjct: 260 QLKETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWN-FNKELDMWGDQPGVD 318
Query: 529 FGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDL 588
+ + L L+ +P ++G L++L L+ + ++ + +
Sbjct: 319 LDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEE 378
Query: 589 SHNFLQGEIPP-QICNMESLEELNLSHNNLFDL--------------------------- 620
+ ++ + + L +L + +
Sbjct: 379 RKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRIT 438
Query: 621 -IPGCFEEMRSLSRIDIAYNELQGPIP 646
I + + L I A +
Sbjct: 439 FISKAIQRLTKLQIIYFANSPFTYDNI 465
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 308 bits (790), Expect = 4e-93
Identities = 111/558 (19%), Positives = 188/558 (33%), Gaps = 18/558 (3%)
Query: 72 CNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALD 131
C + + +LGLN + + L S NVL S L L LD
Sbjct: 8 CIEKEVNKTYNCENLGLN----EIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLD 63
Query: 132 LGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPP 191
L Q+ + L L N L + + L S
Sbjct: 64 LTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFI 123
Query: 192 SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILY 251
L N L LYL +N + L +LD N + +++L L
Sbjct: 124 PLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS 183
Query: 252 LYKNSLF-GFIPSVIGNLKSLFELDLSENQLFGSIP--LSFSNLSSLTLMSLFNNSLSGS 308
L N I + L+ Q I L S + SL L + +
Sbjct: 184 LNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDI 243
Query: 309 IPPTQGNLEALS--ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS 366
P L +S + L + + + S L+ L L L P+ + L +
Sbjct: 244 SPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSEL-PSGLVGLST 302
Query: 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI-PKSFRNLTSLERLRFNQNNL 425
L KL L N + S N L +++ N + NL +L L + +++
Sbjct: 303 LKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDI 362
Query: 426 --FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI-G 482
+ +L L+LS N + ++ P+L + + +
Sbjct: 363 ETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ 422
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE---FGSLTELQYLD 539
+ L+VL+LS + + F+ L +L L L N G + +L L+ L
Sbjct: 423 NLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILV 482
Query: 540 LSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPP 599
LS LSS + +L +++++LS+N+ L + L+L+ N + +P
Sbjct: 483 LSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPS 541
Query: 600 QICNMESLEELNLSHNNL 617
+ + +NL N L
Sbjct: 542 LLPILSQQRTINLRQNPL 559
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 298 bits (765), Expect = 1e-89
Identities = 97/502 (19%), Positives = 181/502 (36%), Gaps = 16/502 (3%)
Query: 159 NHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMG 218
L+ IP + + L N + L NL +L L ++ +
Sbjct: 22 LGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQ 78
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
+ + L L L+ N L +L+ L L+ + + + N K+L L L
Sbjct: 79 SQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGS 138
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD-GVIPPSI 337
N + L ++ NN++ +L+ + L L +N D I P
Sbjct: 139 NHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGA 198
Query: 338 GNLSSLRTLYLYDNGFYGLVPNEIGY--LKSLSKLELCRNHLSGVIPHSIGNLTKLVLV- 394
+ + ++L ++ + ++SL + P L ++ +
Sbjct: 199 FDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVES 258
Query: 395 -NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEI 453
N+ +++ F + +F + L+ L +L ++ L L LS N
Sbjct: 259 INLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLVGLSTLKKLVLSANKFENLC 317
Query: 454 SFNWRNFPKLGTFNASMNNIYGSIPPE-IGDSSKLQVLDLSSNHI--VGKIPVQFEKLFS 510
+ NFP L + N + + + L+ LDLS + I +Q L
Sbjct: 318 QISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSH 377
Query: 511 LNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKS-MGNLSKLHYLNLSNNQF 569
L L L+ N+ F +L+ LDL+ +L +S NL L LNLS++
Sbjct: 378 LQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLL 437
Query: 570 NHKIPTEFEKLIHLSELDLSHNFLQGEI---PPQICNMESLEELNLSHNNLFDLIPGCFE 626
+ F+ L L L+L N + + LE L LS +L + F
Sbjct: 438 DISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFT 497
Query: 627 EMRSLSRIDIAYNELQGPIPNS 648
++ ++ +D+++N L +
Sbjct: 498 SLKMMNHVDLSHNRLTSSSIEA 519
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 276 bits (708), Expect = 1e-81
Identities = 96/480 (20%), Positives = 170/480 (35%), Gaps = 15/480 (3%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
C N IP +L ++ L + N L L +L+ LDL++ Q+ +
Sbjct: 19 CENLGLNEIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDT 76
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSL 300
+ L L L N L + + K+L L + + + N +L + L
Sbjct: 77 FQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136
Query: 301 FNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNG-FYGLVPN 359
+N +S P E L L N + + + +L L L NG +
Sbjct: 137 GSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEP 196
Query: 360 EIGYLKSLSKLELCRNHLSGVIPHSIGN--LTKLVLVNMCENHLFGLIPKSFRNL--TSL 415
L VI + N + L L + + P F L S+
Sbjct: 197 GAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSV 256
Query: 416 ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYG 475
E + ++ F F L LDL+ +L E+ L S N
Sbjct: 257 ESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLVGLSTLKKLVLSANKFEN 315
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQL--SGGVPLEFGSL 532
+ L L + N ++ E L +L +L L+ + + S L+ +L
Sbjct: 316 LCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNL 375
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP-TEFEKLIHLSELDLSHN 591
+ LQ L+LS N+ S ++ +L L+L+ + K + F+ L L L+LSH+
Sbjct: 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHS 435
Query: 592 FLQGEIPPQICNMESLEELNLSHNNLFDLI---PGCFEEMRSLSRIDIAYNELQGPIPNS 648
L + +L+ LNL N+ + + L + +++ +L ++
Sbjct: 436 LLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHA 495
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 4e-55
Identities = 80/401 (19%), Positives = 130/401 (32%), Gaps = 16/401 (3%)
Query: 69 GIFCNLVG-RVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISN--LS 125
+L +S++L+ + G + LN I + N +
Sbjct: 171 EDMSSLQQATNLSLNLNGNDIAGI--EPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQ 228
Query: 126 KLRALDLGNNQLSGVIPQEIGHLTC--LRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183
L + + P L + + ++ S + L L
Sbjct: 229 SLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTAT 288
Query: 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSI-PFSLA 242
+ S +P L LS L L L+ N N SL+ L + N R + L
Sbjct: 289 HLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLE 347
Query: 243 NLSNLGILYLYKNSL--FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSL 300
NL NL L L + + + NL L L+LS N+ +F L L+ L
Sbjct: 348 NLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407
Query: 301 FNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN---GFYGL 356
L + NL L L L + LD L +L+ L L N
Sbjct: 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQ 467
Query: 357 VPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416
N + L L L L LS + H+ +L + V++ N L ++ +L +
Sbjct: 468 KTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI- 526
Query: 417 RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
L N++ + ++L QN L S +
Sbjct: 527 YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIY 567
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 6e-36
Identities = 58/278 (20%), Positives = 97/278 (34%), Gaps = 11/278 (3%)
Query: 80 SISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLY--GNIPPQISNLSKLRALDLGNNQL 137
+S+ + +L L+LS + + Q+ NLS L++L+L N+
Sbjct: 329 HLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEP 388
Query: 138 SGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPSLGNL 196
+ + L +L L L L+ VL L H+ L
Sbjct: 389 LSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGL 448
Query: 197 SNLAYLYLNNNSLFGSI---PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253
L +L L N N + L L IL LS L + +L + + L
Sbjct: 449 PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLS 508
Query: 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ 313
N L + +LK ++ L+L+ N + +P LS ++L N L +
Sbjct: 509 HNRLTSSSIEALSHLKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC---- 563
Query: 314 GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
N+ L + +L+ N LR + L D
Sbjct: 564 SNIYFLEWYKENMQKLEDTEDTLCENPPLLRGVRLSDV 601
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 6e-31
Identities = 53/239 (22%), Positives = 85/239 (35%), Gaps = 25/239 (10%)
Query: 92 FQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEI-GHLTC 150
+ + HL LNLS N +L LDL +L Q +L
Sbjct: 367 CCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHL 426
Query: 151 LRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRI---PPSLGNLSNLAYLYLNNN 207
L++L + L S L + L L N+F SL L L L L+
Sbjct: 427 LKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFC 486
Query: 208 SLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGN 267
L + +L ++ +DLS N+L S +L++L + L L N + +PS++
Sbjct: 487 DLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPI 545
Query: 268 LKSLFELDLSENQLFGSIPLS--------------------FSNLSSLTLMSLFNNSLS 306
L ++L +N L + N L + L + +LS
Sbjct: 546 LSQQRTINLRQNPLDCTCSNIYFLEWYKENMQKLEDTEDTLCENPPLLRGVRLSDVTLS 604
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 5e-29
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 5/189 (2%)
Query: 465 TFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGG 524
T+N + IP + + + L+ S N + F +L +L L L Q+
Sbjct: 16 TYNCENLGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWI 72
Query: 525 VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS 584
F S L L L+AN L ++ L +L + L
Sbjct: 73 HEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLE 132
Query: 585 ELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRI--DIAYNELQ 642
L L N + P+ E L+ L+ +N + L ++ + + ++ N++
Sbjct: 133 SLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192
Query: 643 GPIPNSTAF 651
G P +
Sbjct: 193 GIEPGAFDS 201
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 1e-19
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 9/204 (4%)
Query: 80 SISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSG 139
+ L+ L F + L LNLS ++L + L L+ L+L N
Sbjct: 404 LLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPK 463
Query: 140 VIPQEIG---HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNL 196
Q+ L L +L L L ++N + L HN + +L +L
Sbjct: 464 GNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL 523
Query: 197 SNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS---IPFSLANLSNLGILYLY 253
+ YL L +N + +P+++ L+ ++L QN L + I F N+ L
Sbjct: 524 KGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEWYKENMQKLEDT 582
Query: 254 KNSLFGFIPSVIGNLKSLFELDLS 277
+++L P + G L ++ LS
Sbjct: 583 EDTLCENPPLLRG--VRLSDVTLS 604
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 280 bits (720), Expect = 7e-87
Identities = 99/306 (32%), Positives = 147/306 (48%), Gaps = 17/306 (5%)
Query: 28 ESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVG---RVISISLS 84
+ ALL K L N + LSSW T TW G+ C+ RV ++ LS
Sbjct: 7 DKQALLQIKKDLGNP----TTLSSWL----PTTDCCNRTWLGVLCDTDTQTYRVNNLDLS 58
Query: 85 SLGLNGTFQ-DFSFSSFPHLMYLNLS-CNVLYGNIPPQISNLSKLRALDLGNNQLSGVIP 142
L L + S ++ P+L +L + N L G IPP I+ L++L L + + +SG IP
Sbjct: 59 GLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 118
Query: 143 QEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA-Y 201
+ + L L F N L G++P I L + +T N SG IP S G+ S L
Sbjct: 119 DFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTS 178
Query: 202 LYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261
+ ++ N L G IP NLN L+ +DLS+N L G + N ++L KNSL +
Sbjct: 179 MTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSE 321
+G K+L LDL N+++G++P + L L +++ N+L G I P GNL+
Sbjct: 238 GK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI-PQGGNLQRFDV 295
Query: 322 LGLYIN 327
N
Sbjct: 296 SAYANN 301
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 240 bits (614), Expect = 9e-72
Identities = 87/349 (24%), Positives = 136/349 (38%), Gaps = 57/349 (16%)
Query: 261 IPSVIGNLKSL----FELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGS--IPPTQG 314
I +GN +L D G + + + + + L +L IP +
Sbjct: 14 IKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73
Query: 315 NLEALSELGLY-INQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELC 373
NL L+ L + IN L G IPP+I L+ L LY+ G +P+ + +K+L L+
Sbjct: 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFS 133
Query: 374 RNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAF 433
N LSG +P SI +L LV + N + G IP S+ + + L
Sbjct: 134 YNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL------------------ 175
Query: 434 GDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLS 493
T + +S+N L G IPP + + L +DLS
Sbjct: 176 -----FTSMTISRNRL------------------------TGKIPPTFANLN-LAFVDLS 205
Query: 494 SNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM 553
N + G V F + K+ L N L+ + + G L LDL N++ ++P+ +
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGL 264
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQIC 602
L LH LN+S N +IP L ++N P C
Sbjct: 265 TQLKFLHSLNVSFNNLCGEIPQGG-NLQRFDVSAYANNKCLCGSPLPAC 312
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 232 bits (594), Expect = 4e-69
Identities = 86/399 (21%), Positives = 133/399 (33%), Gaps = 109/399 (27%)
Query: 284 SIPLSFSNLSSL----TLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV--IPPSI 337
I N ++L N + G + T ++ L L L IP S+
Sbjct: 13 QIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSL 72
Query: 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMC 397
NL L LY+ N+L G IP +I LT+L + +
Sbjct: 73 ANLPYLNFLYIGGI-----------------------NNLVGPIPPAIAKLTQLHYLYIT 109
Query: 398 ENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
++ G IP + L LD S N L G
Sbjct: 110 HTNVSGAIPDFLSQIK------------------------TLVTLDFSYNALSG------ 139
Query: 458 RNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL-NKLIL 516
++PP I L + N I G IP + L + +
Sbjct: 140 ------------------TLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 517 NLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE 576
+ N+L+G +P F +L L ++DLS N L G+ ++L+ N + +
Sbjct: 182 SRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-K 239
Query: 577 FEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDI 636
+L+ LDL +N + G +P + ++ L LN+S NN
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN-------------------- 279
Query: 637 AYNELQGPIPNSTAFKD---GLMEGNKGLCGNFKALPSC 672
L G IP + NK LCG+ LP+C
Sbjct: 280 ----LCGEIPQGGNLQRFDVSAYANNKCLCGS--PLPAC 312
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 288 bits (738), Expect = 8e-86
Identities = 108/554 (19%), Positives = 183/554 (33%), Gaps = 39/554 (7%)
Query: 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVN 159
++LS N L SN S+L+ LDL ++ + + L L L N
Sbjct: 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90
Query: 160 HLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMG 218
+ P L+ + L + +G L L L + +N + +P
Sbjct: 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS 150
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGI----LYLYKNSLFGFIPSVIGNLKSLFEL 274
NL +L +DLS N ++ L L L + N + FI L EL
Sbjct: 151 NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPI-DFIQDQAFQGIKLHEL 209
Query: 275 DLSENQLFGSIP-LSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L N +I NL+ L + L L+
Sbjct: 210 TLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD------------------ERNLEIFE 251
Query: 334 PPSIGNLSSLRTLYLYDNG--FYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKL 391
P + L + + + L ++S + L + + + K
Sbjct: 252 PSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYL--EDVPKHFKW 309
Query: 392 VLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY- 450
+++ L +L L+ L N + P+L++LDLS+N L
Sbjct: 310 QSLSIIRCQLKQF---PTLDLPFLKSLTLTMNKG--SISFKKVALPSLSYLDLSRNALSF 364
Query: 451 -GEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-FEKL 508
G S++ L + S N + +LQ LD + + F L
Sbjct: 365 SGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL 423
Query: 509 FSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNN 567
L L ++ F LT L L ++ N + ++ N + L +L+LS
Sbjct: 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC 483
Query: 568 QFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEE 627
Q F+ L L L++SHN L + SL L+ S N +
Sbjct: 484 QLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHF 543
Query: 628 MRSLSRIDIAYNEL 641
+SL+ ++ N +
Sbjct: 544 PKSLAFFNLTNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 258 bits (662), Expect = 4e-75
Identities = 113/496 (22%), Positives = 183/496 (36%), Gaps = 27/496 (5%)
Query: 93 QDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLR 152
+D ++ HL L L+ N + P S L+ L L +L+ + IG L L+
Sbjct: 72 EDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLK 131
Query: 153 MLYFDVNHLHG-SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA----YLYLNNN 207
L N +H +P L+ + + L +N L L L ++ N
Sbjct: 132 KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191
Query: 208 SLFGSIPNVMGNLNSLSILDLSQNQLRGSIP-FSLANLSNLGILYLYKNSLFG------F 260
+ I + L L L N +I L NL+ L + L F
Sbjct: 192 PI-DFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250
Query: 261 IPSVIGNLKSLF--ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA 318
PS++ L + E L+ F + F L++++ MSL S+
Sbjct: 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY--LEDVPKHFK 308
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L + QL +L L++L L N G + + L SLS L+L RN LS
Sbjct: 309 WQSLSIIRCQLKQF---PTLDLPFLKSLTLTMN--KGSISFKKVALPSLSYLDLSRNALS 363
Query: 379 GVIPHSIGNL--TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVY-EAFGD 435
S +L L +++ N ++ +F L L+ L F + L AF
Sbjct: 364 FSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLS 422
Query: 436 HPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI-GDSSKLQVLDLSS 494
L +LD+S N + + L T + N+ + + +++ L LDLS
Sbjct: 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMG 554
+ F+ L L L ++ N L + L L LD S N++ +S
Sbjct: 483 CQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQH 542
Query: 555 NLSKLHYLNLSNNQFN 570
L + NL+NN
Sbjct: 543 FPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 245 bits (628), Expect = 2e-70
Identities = 99/504 (19%), Positives = 178/504 (35%), Gaps = 31/504 (6%)
Query: 163 GSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNS 222
GS+ I + I C + ++P + S+ + L+ N L N +
Sbjct: 2 GSLNPCIEVVPNITYQ--CMDQKLSKVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSE 57
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
L LDLS+ ++ + L +L L L N + F P L SL L E +L
Sbjct: 58 LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA 117
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSG-SIPPTQGNLEALSELGLYINQLDGVIPPSIGNLS 341
L +L +++ +N + +P NL L + L N + + + L
Sbjct: 118 SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLR 177
Query: 342 SLR----TLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIP-HSIGNLTKLVLVNM 396
+L + N + ++ L +L L N S I + NL L + +
Sbjct: 178 ENPQVNLSLDMSLNPIDFI-QDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRL 236
Query: 397 CENHLFG------LIPKSFRNLTSL--ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNN 448
P L + + R N F F N++ + L+ +
Sbjct: 237 ILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVS 296
Query: 449 LYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKL 508
+ + + K + + + P D L+ L L+ N I + L
Sbjct: 297 I--KYLEDVPKHFKWQSLSIIRCQL-KQFPT--LDLPFLKSLTLTMNKG--SISFKKVAL 349
Query: 509 FSLNKLILNLNQLS--GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566
SL+ L L+ N LS G L++LDLS N + + L +L +L+ +
Sbjct: 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGA-IIMSANFMGLEELQHLDFQH 408
Query: 567 NQFNHKIPTE-FEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIP-GC 624
+ F L L LD+S+ + + + SL L ++ N+ D
Sbjct: 409 STLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV 468
Query: 625 FEEMRSLSRIDIAYNELQGPIPNS 648
F +L+ +D++ +L+
Sbjct: 469 FANTTNLTFLDLSKCQLEQISWGV 492
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-33
Identities = 65/253 (25%), Positives = 100/253 (39%), Gaps = 6/253 (2%)
Query: 85 SLGLNGTFQDFSFSSFPHLMYLNLSCNVLY--GNIPPQISNLSKLRALDLGNNQLSGVIP 142
+L +N F + P L YL+LS N L G + LR LDL N ++
Sbjct: 334 TLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMS 392
Query: 143 QEIGHLTCLRMLYFDVNHLHGSIPLE-IGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAY 201
L L+ L F + L L + L + + N L++L
Sbjct: 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT 452
Query: 202 LYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260
L + NS + NV N +L+ LDLS+ QL L L +L + N+L
Sbjct: 453 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALS 320
S L SL LD S N++ S + SL +L NNS++ I Q L+ +
Sbjct: 513 DSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA-CICEHQKFLQWVK 571
Query: 321 ELGLYINQLDGVI 333
E ++ ++ +
Sbjct: 572 EQKQFLVNVEQMT 584
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 245 bits (628), Expect = 1e-73
Identities = 90/295 (30%), Positives = 145/295 (49%), Gaps = 20/295 (6%)
Query: 748 KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFL 807
+F E+ A D+F K +G+G G VYK L G + AVK+ + + +F
Sbjct: 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEE---RTQGGELQFQ 75
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMN 866
EV ++ HRN+++ GFC +V Y+ GS+ + L++ ++ W +R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWT 923
+ G A L+YLH C P I+H D+ + N+LLD E EA V DFG+AK ++ H + T
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT--T 193
Query: 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT--- 980
A GT G+ APE +++EK DV +GV+ LE+I G D ++
Sbjct: 194 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 981 ------EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ +D L +++ +++VA+LC SP RP M +V +L
Sbjct: 254 GLLKEKKLEALVDVDL--QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 7e-68
Identities = 126/542 (23%), Positives = 204/542 (37%), Gaps = 54/542 (9%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
IP + + LDL N L + L++L + LS ++
Sbjct: 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLR-G 235
L L N + LS+L L +L +G+L +L L+++ N ++
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF 139
Query: 236 SIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL----FELDLSENQLFGSIPLSFSN 291
+P +NL+NL L L N + + + L + LDLS N + P +F
Sbjct: 140 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE 199
Query: 292 LSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYI------NQLDGVIPPSIGNLSSLR 344
+ L ++L NN S ++ T L L L + L+ ++ L +L
Sbjct: 200 IR-LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLT 258
Query: 345 TLYL---YDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCENH 400
Y + + + + L ++S L + V S L LVN
Sbjct: 259 IEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQ 318
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
L SL+RL F N + D P+L FLDLS+N L
Sbjct: 319 F------PTLKLKSLKRLTFTSNKG--GNAFSEVDLPSLEFLDLSRNGL----------- 359
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
+ G ++ L+ LDLS N ++ + F L L L +
Sbjct: 360 -----------SFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSN 407
Query: 521 LSGGVPLE-FGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FE 578
L F SL L YLD+S + LS L L ++ N F + F
Sbjct: 408 LKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 467
Query: 579 KLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIA 637
+L +L+ LDLS L+ ++ P ++ SL+ LN++ N L + G F+ + SL +I +
Sbjct: 468 ELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLH 526
Query: 638 YN 639
N
Sbjct: 527 TN 528
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 236 bits (605), Expect = 1e-67
Identities = 110/498 (22%), Positives = 187/498 (37%), Gaps = 30/498 (6%)
Query: 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL 223
IP + L L N S + L L L+ + +L+ L
Sbjct: 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78
Query: 224 SILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL-F 282
S L L+ N ++ + + LS+L L + +L IG+LK+L EL+++ N +
Sbjct: 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALS----ELGLYINQLDGVIPPSIG 338
+P FSNL++L + L +N + L + L L +N ++ I P
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAF 197
Query: 339 NLSSLRTLYLYDNGF-YGLVPNEIGYLKSLSKLELCR------NHLSGVIPHSIGNLTKL 391
L L L +N ++ I L L L +L ++ L L
Sbjct: 198 KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257
Query: 392 VLVNMCENHL---FGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNN 448
+ +L I F LT++ + ++ + L+L
Sbjct: 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSY--NFGWQHLELVNCK 315
Query: 449 LYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI--VGKIPVQFE 506
+ ++ +L + N G+ E+ S L+ LDLS N + G
Sbjct: 316 FGQFPTLKLKSLKRL---TFTSNKG-GNAFSEVDLPS-LEFLDLSRNGLSFKGCCSQSDF 370
Query: 507 KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLS 565
SL L L+ N + + F L +L++LD + L S+ +L L YL++S
Sbjct: 371 GTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 429
Query: 566 NNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNLFDLIPGC 624
+ F L L L ++ N Q P I + +L L+LS L L P
Sbjct: 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Query: 625 FEEMRSLSRIDIAYNELQ 642
F + SL +++A N+L+
Sbjct: 490 FNSLSSLQVLNMASNQLK 507
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 226 bits (579), Expect = 3e-64
Identities = 109/512 (21%), Positives = 179/512 (34%), Gaps = 30/512 (5%)
Query: 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVN 159
L+LS N L + +L+ LDL ++ + L+ L L N
Sbjct: 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86
Query: 160 HLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSL-FGSIPNVMG 218
+ LS + L N + +G+L L L + +N + +P
Sbjct: 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS 146
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGI----LYLYKNSLFGFIPSVIGNLKSLFEL 274
NL +L LDLS N+++ L L + + L L N + P + L +L
Sbjct: 147 NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKL 205
Query: 275 DLSENQLFGSIP-LSFSNLSSLTLMSLF------NNSLSGSIPPTQGNLEALSELGLYIN 327
L N ++ L+ L + L +L L L+ +
Sbjct: 206 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265
Query: 328 QLDGV---IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS 384
LD I L+++ + L + Y LEL
Sbjct: 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFS--YNFGWQHLELVNCKFGQFPTLK 323
Query: 385 IGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL--RFNQNNLFGKVYEAFGDHPNLTFL 442
+ +L +L + N S +L SLE L N + G ++ +L +L
Sbjct: 324 LKSLKRLTFTS---NKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYL 378
Query: 443 DLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI--GDSSKLQVLDLSSNHIVGK 500
DLS N + +S N+ +L + +N+ + L LD+S H
Sbjct: 379 DLSFNGVI-TMSSNFLGLEQLEHLDFQHSNL-KQMSEFSVFLSLRNLIYLDISHTHTRVA 436
Query: 501 IPVQFEKLFSLNKLILNLNQLSGGVPLE-FGSLTELQYLDLSANKLSSSIPKSMGNLSKL 559
F L SL L + N + F L L +LDLS +L P + +LS L
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496
Query: 560 HYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
LN+++NQ F++L L ++ L N
Sbjct: 497 QVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 216 bits (551), Expect = 2e-60
Identities = 118/516 (22%), Positives = 189/516 (36%), Gaps = 34/516 (6%)
Query: 79 ISISLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGN 134
+ S +L L+ +SF SFP L L+LS + +LS L L L
Sbjct: 26 LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85
Query: 135 NQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNF-SGRIPPSL 193
N + + L+ L+ L +L IG L + L + HN S ++P
Sbjct: 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 145
Query: 194 GNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSI----LDLSQNQLRGSIPFSLANLSNLGI 249
NL+NL +L L++N + + L+ + + LDLS N + P + + L
Sbjct: 146 SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHK 204
Query: 250 LYLYKNSLFGFIPS-VIGNLKSLFELDLSENQLFGSIPLS------FSNLSSLTLMSLFN 302
L L N + I L L L + L L +LT+
Sbjct: 205 LTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264
Query: 303 NSLSGS---IPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPN 359
L I L +S L ++ V + L L + F
Sbjct: 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL 322
Query: 360 EIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL--FGLIPKSFRNLTSLER 417
+ LKSL +L N +L L +++ N L G +S TSL+
Sbjct: 323 K---LKSLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKY 377
Query: 418 LRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN-WRNFPKLGTFNASMNNIYGS 476
L + N + + F L LD +NL F+ + + L + S +
Sbjct: 378 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-V 435
Query: 477 IPPEIGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFGSLTE 534
I + S L+VL ++ N F +L +L L L+ QL P F SL+
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
LQ L++++N+L S L+ L + L N ++
Sbjct: 496 LQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 6e-39
Identities = 81/376 (21%), Positives = 135/376 (35%), Gaps = 24/376 (6%)
Query: 64 PCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQ-IS 122
CT + + +S+ LS +N Q +F L L L N N+ I
Sbjct: 165 YCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQ 222
Query: 123 NLSKLRALDL------GNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIG---KLS 173
L+ L L L + L L + F + +L + I L+
Sbjct: 223 GLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT 282
Query: 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQL 233
++ +L +L L N P + L SL L + N+
Sbjct: 283 NVSSFSLVSVTIER--VKDFSYNFGWQHLELVNCKFG-QFPTL--KLKSLKRLTFTSNKG 337
Query: 234 RGSIPFSLANLSNLGILYLYKNSL--FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSN 291
+ +L +L L L +N L G SL LDLS N + ++ +F
Sbjct: 338 GNAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLG 394
Query: 292 LSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYD 350
L L + +++L + +L L L + LSSL L +
Sbjct: 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 454
Query: 351 NGFYGLVPNEI-GYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409
N F +I L++L+ L+L + L + P + +L+ L ++NM N L + F
Sbjct: 455 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIF 514
Query: 410 RNLTSLERLRFNQNNL 425
LTSL+++ + N
Sbjct: 515 DRLTSLQKIWLHTNPW 530
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-35
Identities = 75/404 (18%), Positives = 126/404 (31%), Gaps = 67/404 (16%)
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALS 320
IP + S LDLS N L SF + L ++ L + +L LS
Sbjct: 22 IPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79
Query: 321 ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV 380
L L N + + + LSSL+ L + L IG+LK+L +L + N +
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF 139
Query: 381 -IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439
+P NLT L +++ N + + R L + L +
Sbjct: 140 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS------------------ 181
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499
LDLS N + I P +L L L +N
Sbjct: 182 --LDLSLNPM-------------------------NFIQPGAFKEIRLHKLTLRNNFDSL 214
Query: 500 KIP-VQFEKLFSLNKLILNLNQLSGGVPLE------FGSLTELQYLDLSANKLSSSIPKS 552
+ + L L L L + LE L L + L +
Sbjct: 215 NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDI 274
Query: 553 MG---NLSKLHYLNLSNNQFNHKIPTEFE-KLIHLSELDLSHNFLQGEIPPQICNMESLE 608
+ L+ + +L + + HL ++ ++SL+
Sbjct: 275 IDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPT------LKLKSLK 328
Query: 609 ELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFK 652
L + N + ++ SL +D++ N L S +
Sbjct: 329 RLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSFKGCCSQSDF 370
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 4e-30
Identities = 58/227 (25%), Positives = 87/227 (38%), Gaps = 7/227 (3%)
Query: 88 LNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLS--GVIPQEI 145
+N F F L L + N +L L LDL N LS G Q
Sbjct: 312 VNCKFGQFPTLKLKSLKRLTFTSNKG--GNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSD 369
Query: 146 GHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS-LGNLSNLAYLYL 204
T L+ L N + ++ L + L H+N S +L NL YL +
Sbjct: 370 FGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428
Query: 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSI-PFSLANLSNLGILYLYKNSLFGFIPS 263
++ + + L+SL +L ++ N + + P L NL L L + L P+
Sbjct: 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488
Query: 264 VIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIP 310
+L SL L+++ NQL F L+SL + L N S P
Sbjct: 489 AFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 225 bits (576), Expect = 8e-65
Identities = 98/453 (21%), Positives = 171/453 (37%), Gaps = 37/453 (8%)
Query: 169 IGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDL 228
L+ L N + S +L + L + + + + LN+L+ ++
Sbjct: 20 DTALAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINF 75
Query: 229 SQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS 288
S NQL P NL+ L + + N + P + NL +L L L NQ+ PL
Sbjct: 76 SNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLK 131
Query: 289 FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYL 348
NL++L + L +N++S L +L +L D + NL++L L +
Sbjct: 132 --NLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQVTD---LKPLANLTTLERLDI 184
Query: 349 YDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKS 408
N + + + L +L L N +S + P +G LT L +++ N L + +
Sbjct: 185 SSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GT 238
Query: 409 FRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNA 468
+LT+L L N + LT L L N + L
Sbjct: 239 LASLTNLTDLDLANNQI--SNLAPLSGLTKLTELKLGANQISNISPLA--GLTALTNLEL 294
Query: 469 SMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE 528
+ N + P I + L L L N+I P L L +L N++S
Sbjct: 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD--VSS 348
Query: 529 FGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDL 588
+LT + +L N++S P + NL+++ L L++ + + + S +
Sbjct: 349 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANV---SIPNT 403
Query: 589 SHNFLQGEIPP-QICNMESLEELNLSHNNLFDL 620
N I P I + S E +++ N
Sbjct: 404 VKNVTGALIAPATISDGGSYTEPDITWNLPSYT 436
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 216 bits (552), Expect = 2e-61
Identities = 104/511 (20%), Positives = 185/511 (36%), Gaps = 61/511 (11%)
Query: 106 LNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSI 165
++ + I + L++ LG ++ + Q L + L D +
Sbjct: 6 ATITQDTPINQIFT-DTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGI--KS 60
Query: 166 PLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSI 225
+ L+ + + +N + P L NL+ L + +NNN + P + NL +L+
Sbjct: 61 IDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116
Query: 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285
L L NQ+ P NL+NL L L N++ + L SL +L NQ+
Sbjct: 117 LTLFNNQITDIDPLK--NLTNLNRLELSSNTISDISA--LSGLTSLQQLSFG-NQVTDLK 171
Query: 286 PLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRT 345
PL+ NL++L + + +N +S L L L NQ+ + P +G L++L
Sbjct: 172 PLA--NLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDE 225
Query: 346 LYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI 405
L L N + + L +L+ L+L N +S + P + LTKL + + N + +
Sbjct: 226 LSLNGNQLKDIGT--LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS 281
Query: 406 PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGT 465
P LT+L L N+N L + + NLT+L L NN+ + + KL
Sbjct: 282 P--LAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVS--SLTKLQR 335
Query: 466 FNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGV 525
N + S + + + + L N I P
Sbjct: 336 LFFYNNKV--SDVSSLANLTNINWLSAGHNQISDLTP----------------------- 370
Query: 526 PLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSE 585
+LT + L L+ +++ N+S + + P +E
Sbjct: 371 ---LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI--APATISDGGSYTE 425
Query: 586 LDLSHNFLQGEIPPQICNMESLEELNLSHNN 616
D++ N +
Sbjct: 426 PDITWNLPS-YTNEVSYTFSQPVTIGKGTTT 455
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 2e-59
Identities = 104/474 (21%), Positives = 182/474 (38%), Gaps = 58/474 (12%)
Query: 175 INVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLR 234
+ T+ + +I L+ L ++ ++ +L+ ++ L + +
Sbjct: 3 LGSATITQDTPINQIFT-DTALAEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGI- 58
Query: 235 GSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSS 294
+ L+NL + N L P + NL L ++ ++ NQ+ PL+ NL++
Sbjct: 59 -KSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTN 113
Query: 295 LTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFY 354
LT ++LFNN ++ P NL L+ L L N + + ++ L+SL+ L +
Sbjct: 114 LTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFGNQV-- 167
Query: 355 GLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTS 414
+ L +L +L++ N +S + + LT L + N + + P LT+
Sbjct: 168 -TDLKPLANLTTLERLDISSNKVSDISV--LAKLTNLESLIATNNQISDITP--LGILTN 222
Query: 415 LERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIY 474
L+ L N N L K NLT LDL+ N +
Sbjct: 223 LDELSLNGNQL--KDIGTLASLTNLTDLDLANNQI------------------------- 255
Query: 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTE 534
S + +KL L L +N I P L +L L LN NQL +L
Sbjct: 256 -SNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLED--ISPISNLKN 310
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
L YL L N +S P + +L+KL L NN+ + L +++ L HN +
Sbjct: 311 LTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKV--SDVSSLANLTNINWLSAGHNQIS 366
Query: 595 GEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS 648
P + N+ + +L L+ + + + + L P S
Sbjct: 367 DLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATIS 418
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 200 bits (512), Expect = 4e-56
Identities = 113/431 (26%), Positives = 178/431 (41%), Gaps = 32/431 (7%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
+L +N S N L +I P + NL+KL + + NNQ++ + P + +LT L L
Sbjct: 63 GVEYLNNLTQINFSNNQL-TDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN 215
N + PL L+ +N L L N S +L L++L L N +
Sbjct: 119 LFNNQITDIDPL--KNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQVT--DLKP 172
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ NL +L LD+S N++ S LA L+NL L N + P +G L +L EL
Sbjct: 173 L-ANLTTLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELS 227
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
L+ NQL + ++L++LT + L NN +S P L L+EL L NQ+ + P
Sbjct: 228 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP- 282
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
+ L++L L L +N + P I LK+L+ L L N++S + P + +LTKL +
Sbjct: 283 -LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLF 337
Query: 396 MCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISF 455
N + + NLT++ L N + + +T L L+
Sbjct: 338 FYNNKVSDVSS--LANLTNINWLSAGHNQI--SDLTPLANLTRITQLGLNDQAWTNAPVN 393
Query: 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI 515
N T + P I D D++ N V + +
Sbjct: 394 YKANVSIPNTVKNVTGAL--IAPATISDGGSYTEPDITWNLPSYTNEVSYT-FSQPVTIG 450
Query: 516 LNLNQLSGGVP 526
SG V
Sbjct: 451 KGTTTFSGTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 5e-09
Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 10/117 (8%)
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLS 589
G L ++ + L++ L + L ++ L
Sbjct: 1 GPLGSA--TITQDTPINQIFTDT--ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQAD 54
Query: 590 HNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646
+ + + +L ++N S+N L D+ P + + L I + N++ P
Sbjct: 55 RL--GIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP 107
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 2e-64
Identities = 125/561 (22%), Positives = 215/561 (38%), Gaps = 39/561 (6%)
Query: 122 SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTL 180
L+ L L N + V L L++L + +I E L + +L L
Sbjct: 21 QVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDL 80
Query: 181 CHNNFSGRIPPS-LGNLSNLAYLYLNNNSLFGSI--PNVMGNLNSLSILDLSQNQLRG-S 236
+ + P L +L L L L ++ NL +L+ LDLS+NQ+R
Sbjct: 81 GSSKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY 139
Query: 237 IPFSLANLSNLGILYLYKNSLFGFIPSVIGNL--KSLFELDLSENQLFGSIPLSFSN-LS 293
+ S L++L + N +F + L K+L L+ N L+ + + + ++
Sbjct: 140 LHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMN 199
Query: 294 SLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGF 353
M L +SG N + G + N + S+ + +
Sbjct: 200 PFRNMVLEILDVSG-------NGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252
Query: 354 YGLVPNEIGYLK--SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRN 411
N L S+ L+L + + L L ++N+ N + + ++F
Sbjct: 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYG 312
Query: 412 LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMN 471
L +L+ L + N L F P + ++DL +N++ ++ KL T + N
Sbjct: 313 LDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDN 372
Query: 472 NIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEF-G 530
+ I + + LS N +V +P + N + L+ N+L L F
Sbjct: 373 AL-----TTIHFIPSIPDIFLSGNKLV-TLPKIN---LTANLIHLSENRLENLDILYFLL 423
Query: 531 SLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTE-----FEKLIHLS 584
+ LQ L L+ N+ SS L L L N TE FE L HL
Sbjct: 424 RVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ 483
Query: 585 ELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643
L L+HN+L +PP + ++ +L L+L+ N L L +L +DI+ N+L
Sbjct: 484 VLYLNHNYLN-SLPPGVFSHLTALRGLSLNSNRLTVLSHNDL--PANLEILDISRNQLLA 540
Query: 644 PIPNS-TAFKDGLMEGNKGLC 663
P P+ + + NK +C
Sbjct: 541 PNPDVFVSLSVLDITHNKFIC 561
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 230 bits (589), Expect = 2e-63
Identities = 142/643 (22%), Positives = 228/643 (35%), Gaps = 51/643 (7%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEI-GHLTCLRMLY 155
L LS N + L +L+ L+LG+ I +E +L LR+L
Sbjct: 20 PQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILD 79
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS--LGNLSNLAYLYLNNNSLFG-S 212
+ ++ P L + L L S + NL L L L+ N +
Sbjct: 80 LGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY 139
Query: 213 IPNVMGNLNSLSILDLSQNQLRGSIPFSLANLS--NLGILYLYKNSLFGFIPSVIGNLKS 270
+ G LNSL +D S NQ+ L L L L NSL+ + G +
Sbjct: 140 LHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMN 199
Query: 271 LFE-LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329
F + L + G N ++ + F+N++S S + + G + +
Sbjct: 200 PFRNMVLEILDVSG-------NGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252
Query: 330 DGVIPPSIGNL--SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGN 387
+ L SS+R L L + L LK L L L N ++ + +
Sbjct: 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYG 312
Query: 388 LTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQN 447
L L ++N+ N L L +F L + + +N++ + F L LDL N
Sbjct: 313 LDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDN 372
Query: 448 NLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG-KIPVQFE 506
L P + S N + ++P + ++ LS N + I
Sbjct: 373 AL-----TTIHFIPSIPDIFLSGNKL-VTLPK---INLTANLIHLSENRLENLDILYFLL 423
Query: 507 KLFSLNKLILNLNQLSGGVPLE-FGSLTELQYLDLSANKLS----SSIPKSM-GNLSKLH 560
++ L LILN N+ S + L+ L L N L + + + LS L
Sbjct: 424 RVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ 483
Query: 561 YLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDL 620
L L++N N P F L L L L+ N L + +LE L++S N L
Sbjct: 484 VLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHND-LPANLEILDISRNQLLAP 541
Query: 621 IPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLMEGNKGLCGNF-------------K 667
P F SLS +DI +N+ ST F + L N + G
Sbjct: 542 NPDVFV---SLSVLDITHNKFICECELST-FINWLNHTNVTIAGPPADIYCVYPDSFSGV 597
Query: 668 ALPSCDAFMSHEQTSRKKWVVIVFPILGMVVLLIGLFGFFLFF 710
+L S E+ K +F + + + L + +
Sbjct: 598 SLFSLSTEGCDEEEVLKSLKFSLFIVCTVTLTLFLMTILTVTK 640
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 1e-47
Identities = 104/455 (22%), Positives = 169/455 (37%), Gaps = 61/455 (13%)
Query: 202 LYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261
+ +L +P LN+ L LS N +R S L L +L L I
Sbjct: 9 AFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTI 64
Query: 262 -PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ--GNLEA 318
NL +L LDL ++++ P +F L L + L+ LS ++ NL+A
Sbjct: 65 DKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124
Query: 319 LSELGLYINQLDGV-IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL--KSLSKLELCRN 375
L+ L L NQ+ + + PS G L+SL+++ N + + +E+ L K+LS L N
Sbjct: 125 LTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAAN 184
Query: 376 HLSGVIPHSIGNLTK------LVLVNMCENHLFGLIPKSFRN-LTSLERLRFNQNNLFGK 428
L + G L ++++ N I +F N ++ +
Sbjct: 185 SLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILA----- 239
Query: 429 VYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQ 488
++ +N+ + F L S ++
Sbjct: 240 --------HHIMGAGFGFHNIK---DPDQNTFAGL-------------------ARSSVR 269
Query: 489 VLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSS 548
LDLS + FE L L L L N+++ F L LQ L+LS N L
Sbjct: 270 HLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL 329
Query: 549 IPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLE 608
+ L K+ Y++L N F+ L L LDL N L I + S+
Sbjct: 330 YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIP 384
Query: 609 ELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643
++ LS N L L + + I ++ N L+
Sbjct: 385 DIFLSGNKLVTLPKINL----TANLIHLSENRLEN 415
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 1e-42
Identities = 117/581 (20%), Positives = 203/581 (34%), Gaps = 86/581 (14%)
Query: 69 GIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLS--K 126
G F NL + + LS + + SF L ++ S N ++ ++ L
Sbjct: 117 GYFRNLK-ALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKT 175
Query: 127 LRALDLGNNQLSGVIPQEIGH-LTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNF 185
L L N L + + G + R + ++ + G+ ++ + N
Sbjct: 176 LSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGN------GWTVD-ITGNFSNAI 228
Query: 186 SGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSI--LDLSQNQLRGSIPFSLAN 243
S SL ++ +++ N L S+ LDLS +
Sbjct: 229 SKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFET 288
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L +L +L L N + L +L L+LS N L +F L + + L N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
++ T LE L L L N L +I + S+ ++L N
Sbjct: 349 HIAIIQDQTFKFLEKLQTLDLRDNAL-----TTIHFIPSIPDIFLSGN-----------K 392
Query: 364 LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL-IPKSFRNLTSLERLRFNQ 422
L +L K+ L N + ++ EN L L I + L+ L NQ
Sbjct: 393 LVTLPKINLTANLI-----------------HLSENRLENLDILYFLLRVPHLQILILNQ 435
Query: 423 NNLFGKVYEA-FGDHPNLTFLDLSQNNL--YGEISFNWRNFPKLGTFNASMNNIYGSIPP 479
N + ++P+L L L +N L E W F L
Sbjct: 436 NRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGL---------------- 479
Query: 480 EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLD 539
S LQVL L+ N++ P F L +L L LN N+L+ + L+ LD
Sbjct: 480 -----SHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL--PANLEILD 532
Query: 540 LSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHNFLQGEIP 598
+S N+L + P L L++++N+F + F ++ + + ++
Sbjct: 533 ISRNQLLAPNPDV---FVSLSVLDITHNKFICECELSTFINWLNHTNVTIAGPP------ 583
Query: 599 PQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639
++ + + S +LF L +E L + +
Sbjct: 584 ---ADIYCVYPDSFSGVSLFSLSTEGCDEEEVLKSLKFSLF 621
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 218 bits (556), Expect = 3e-61
Identities = 102/541 (18%), Positives = 196/541 (36%), Gaps = 44/541 (8%)
Query: 106 LNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSI 165
+ +IP ++ + +++LDL N+++ + ++ L++L + ++
Sbjct: 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIE 66
Query: 166 PLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLS 224
L + L L N+ S G LS+L YL L N + ++ NL +L
Sbjct: 67 GDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126
Query: 225 ILDLSQNQLRGSIP-FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFG 283
L + + I A L++L L + SL + + +++ + L L ++
Sbjct: 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186
Query: 284 SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSL 343
+ + LSS+ + L + +L+ E S + + + S L L
Sbjct: 187 LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKL 246
Query: 344 RTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403
L L E + + V + +++ + +LF
Sbjct: 247 LRYIL------ELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFY 300
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKL 463
+ + L ++R+ + +F +L FLDLS+N + E N
Sbjct: 301 DLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACK--- 357
Query: 464 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI--VGKIPVQFEKLFSLNKLILNLNQL 521
G LQ L LS NH+ + K L +L L ++ N
Sbjct: 358 ------------------GAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF 399
Query: 522 SGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLI 581
+P ++++L+LS+ + + L L++SNN + L
Sbjct: 400 HP-MPDSCQWPEKMRFLNLSSTGIRV-VKT--CIPQTLEVLDVSNNNLDS-FSLF---LP 451
Query: 582 HLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNEL 641
L EL +S N L+ +P L + +S N L + G F+ + SL +I + N
Sbjct: 452 RLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
Query: 642 Q 642
Sbjct: 510 D 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 206 bits (525), Expect = 4e-57
Identities = 96/504 (19%), Positives = 175/504 (34%), Gaps = 49/504 (9%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRML 154
+ +L L L + + I +L L LDL +N LS + G L+ L+ L
Sbjct: 45 DLRACANLQVLILKSSRI-NTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYL 103
Query: 155 YFDVNHLHG-SIPLEIGKLSLINVLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGS 212
N + L+ + L + + I L++L L + SL
Sbjct: 104 NLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163
Query: 213 IPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLF 272
+ ++ + L L ++ + LS++ L L +L F S + +
Sbjct: 164 QSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSS 223
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332
+ + SF+ L L L + + + ++ D V
Sbjct: 224 PMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFD------DCTLNGLGDFNPSESDVV 277
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
++R L++ + + L+ + ++ + + + V +L L
Sbjct: 278 SELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLE 337
Query: 393 LVNMCENHLFGLIPKS---FRNLTSLERLRFNQNNL--FGKVYEAFGDHPNLTFLDLSQN 447
+++ EN + K+ SL+ L +QN+L K E NLT LD+S+N
Sbjct: 338 FLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRN 397
Query: 448 NLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEK 507
+P K++ L+LSS I V+
Sbjct: 398 TF-------------------------HPMPDSCQWPEKMRFLNLSSTGIRV---VKTCI 429
Query: 508 LFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNN 567
+L L ++ N L L L LQ L +S NKL + +P + L + +S N
Sbjct: 430 PQTLEVLDVSNNNLDS-FSL---FLPRLQELYISRNKLKT-LPDA-SLFPVLLVMKISRN 483
Query: 568 QFNHKIPTEFEKLIHLSELDLSHN 591
Q F++L L ++ L N
Sbjct: 484 QLKSVPDGIFDRLTSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 8e-39
Identities = 70/511 (13%), Positives = 154/511 (30%), Gaps = 111/511 (21%)
Query: 60 TKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPP 119
+ + F NL ++ + ++ + F+ L L + L
Sbjct: 111 QTLGVTSLFPNLTNLQ----TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166
Query: 120 QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179
+ ++ + L L ++ + ++ L+ +R L +L + + + +
Sbjct: 167 SLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226
Query: 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF 239
S S L L L + + + + D + ++
Sbjct: 227 KLAFRGSVLTDESFNELLKLLRYILELSEV------EFDDCTLNGLGDFNPSESDVVSEL 280
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMS 299
+ L++ + LF + +V L+ + + + +++F +L SL +
Sbjct: 281 GKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLD 340
Query: 300 LFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPN 359
L N + G SL+TL L N
Sbjct: 341 LSENLMVEEYLKNSA---------------------CKGAWPSLQTLVLSQN-------- 371
Query: 360 EIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLR 419
+L+S+ K + L +L L
Sbjct: 372 ---HLRSMQK-----------------------------------TGEILLTLKNLTSLD 393
Query: 420 FNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPP 479
++N + ++ + FL+LS + +
Sbjct: 394 ISRNTF-HPMPDSCQWPEKMRFLNLSSTGI-------------------------RVVKT 427
Query: 480 EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLD 539
I + L+VLD+S+N++ + L L +L ++ N+L +P + L +
Sbjct: 428 CIPQT--LEVLDVSNNNL-DSFSLF---LPRLQELYISRNKLK-TLP-DASLFPVLLVMK 479
Query: 540 LSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
+S N+L S L+ L + L N ++
Sbjct: 480 ISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 5e-37
Identities = 59/368 (16%), Positives = 140/368 (38%), Gaps = 13/368 (3%)
Query: 291 NLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYD 350
+ + + + S + SIP G A+ L L N++ + + ++L+ L L
Sbjct: 3 SCDASGVCDGRSRSFT-SIPS--GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKS 59
Query: 351 NGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL-IPKSF 409
+ + + L SL L+L NHLS + G L+ L +N+ N L + F
Sbjct: 60 SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF 119
Query: 410 RNLTSLERLRFNQNNLFGKVYE-AFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNA 468
NLT+L+ LR F ++ F +L L++ +L S + ++ +
Sbjct: 120 PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179
Query: 469 SMNNIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL 527
++ + D S ++ L+L ++ + + + S
Sbjct: 180 HLSES-AFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDE 238
Query: 528 EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELD 587
F L +L L +++ + + + + ++ + + + + L
Sbjct: 239 SFNELLKLLRYILELSEVE------FDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLH 292
Query: 588 LSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPN 647
+ +L ++ +E ++ + + ++ +F + + ++SL +D++ N +
Sbjct: 293 IPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLK 352
Query: 648 STAFKDGL 655
++A K
Sbjct: 353 NSACKGAW 360
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 1e-59
Identities = 92/316 (29%), Positives = 138/316 (43%), Gaps = 34/316 (10%)
Query: 728 KATDDFGDPFGFSSVLNFNG-KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIF 786
KAT+ D S ++ F + ++ +A ++F K+ IG G G VYK L G
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 787 AVKKFNSQLLFDEMADQ--DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRG 844
A+K+ + Q +EF E+ L+ RH +++ GFC ++ +Y++ G
Sbjct: 67 ALKRRTPESS------QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120
Query: 845 SLTTIL-KDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE 903
+L L D W QR+ + G A L YLH I+H D+ S N+LLD
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFV 177
Query: 904 AHVSDFGIAKFLNP-----HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
++DFGI+K H S T GT GY PE R TEK DV+SFGV+ EV
Sbjct: 178 PKITDFGISK-KGTELDQTHLS--TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 959 IKGNHPRDYVSTNFSSFSNMIT---------EINQNLDHRLPTPSRDVMDKLMSIMEVAI 1009
+ + N+ ++ Q +D L + + L + A+
Sbjct: 235 LCARSAIVQ--SLPREMVNLAEWAVESHNNGQLEQIVDPNL--ADKIRPESLRKFGDTAV 290
Query: 1010 LCLVESPEARPTMKKV 1025
CL S E RP+M V
Sbjct: 291 KCLALSSEDRPSMGDV 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 198 bits (507), Expect = 4e-57
Identities = 85/307 (27%), Positives = 133/307 (43%), Gaps = 46/307 (14%)
Query: 749 FLYEEIIKAIDDFGEKYC------IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMAD 802
F + E+ ++F E+ +G+G G VYK + + + AVKK + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEEL 73
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+ +F E+ + + +H N+++ GF S+ +V Y+ GSL L W+
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL----NPH 918
R + +G AN +++LH + +H DI S N+LLD A +SDFG+A+
Sbjct: 134 MRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 919 SSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN 977
+ + GT Y APE + T K D++SFGV+ LE+I G D
Sbjct: 191 MT--SRIVGTTAYMAPE--ALRGEITPKSDIYSFGVVLLEIITGLPAVDE---------- 236
Query: 978 MITEINQNL-DHRLPTPS-----RDVMDKLMS---------IMEVAILCLVESPEARPTM 1022
Q L D + D +DK M+ + VA CL E RP +
Sbjct: 237 --HREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 1023 KKVCNLL 1029
KKV LL
Sbjct: 295 KKVQQLL 301
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 193 bits (492), Expect = 5e-55
Identities = 75/311 (24%), Positives = 120/311 (38%), Gaps = 49/311 (15%)
Query: 749 FLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLN 808
E + +GR G V+KA+L AVK F Q D+ + N
Sbjct: 14 LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-------DKQSWQN 65
Query: 809 E--VLALTEIRHRNIIKFHGFCSNAQHS----FIVSEYLDRGSLTTILKDDAAAKEFGWN 862
E V +L ++H NI++F G ++++ + ++GSL+ LK + WN
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV----VSWN 121
Query: 863 QRMNVIKGVANALSYLHHDCL-------PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915
+ ++ + +A L+YLH D P I H DI SKNVLL + A ++DFG+A
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
Query: 916 NPHSSNW--TAFAGTFGYAAPEIA-----HMMRATEKYDVHSFGVLALEVIKGNHPRDYV 968
S GT Y APE+ A + D+++ G++ E+ D
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
Query: 969 STNFS-----------SFSNMITEI-NQNLDHRLP--TPSRDVMDKLMSIMEVAILCLVE 1014
+ S +M + ++ L M L +E C
Sbjct: 242 VDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIE---ECWDH 298
Query: 1015 SPEARPTMKKV 1025
EAR + V
Sbjct: 299 DAEARLSAGCV 309
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 5e-54
Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 21/279 (7%)
Query: 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEV 810
+ ++ + EK IG G G+V++AE G AVK Q E + EFL EV
Sbjct: 36 WCDL-----NIKEK--IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN--EFLREV 85
Query: 811 LALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG 870
+ +RH NI+ F G + + IV+EYL RGSL +L A ++ +R+++
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
VA ++YLH+ PPIVH ++ S N+L+D ++ V DFG+++ + + AGT
Sbjct: 146 VAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE 204
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
+ APE+ + EK DV+SFGV+ E+ P + + N + + + RL
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP--WGNLNPAQVVAAV--GFKCK--RL 258
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P ++ ++ +I+E C P RP+ + +LL
Sbjct: 259 EIPR-NLNPQVAAIIE---GCWTNEPWKRPSFATIMDLL 293
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 8e-54
Identities = 86/423 (20%), Positives = 162/423 (38%), Gaps = 78/423 (18%)
Query: 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279
+L+ L NQ+ F A+L+ L K S+ + L+S+ +L ++
Sbjct: 2 AATLATLPAPINQI-----FPDADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGE 54
Query: 280 QLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339
++ SI L++L ++L N ++ P NL L+ L + N++ ++ N
Sbjct: 55 KV-ASIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKI--TDISALQN 108
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN 399
L++LR LYL ++ + P + L + L L NH
Sbjct: 109 LTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLS-------------------- 146
Query: 400 HLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRN 459
N+T L L ++ + K + +L L L+ N +
Sbjct: 147 -----DLSPLSNMTGLNYLTVTESKV--KDVTPIANLTDLYSLSLNYNQI---------- 189
Query: 460 FPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLN 519
+ + L N I P + LN L + N
Sbjct: 190 ----------------EDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN 231
Query: 520 QLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEK 579
+++ PL +L++L +L++ N++S ++ +L+KL LN+ +NQ + +
Sbjct: 232 KITDLSPL--ANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISD--ISVLNN 285
Query: 580 LIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639
L L+ L L++N L E I + +L L LS N++ D+ P + + D A
Sbjct: 286 LSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQ 343
Query: 640 ELQ 642
++
Sbjct: 344 VIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 186 bits (476), Expect = 1e-52
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 23/330 (6%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
+ + L ++ + +I I L+ L L+L NQ++ + P + +L L LY
Sbjct: 39 TQEELESITKLVVAGEKV-ASIQG-IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLY 94
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN 215
N + + + L+ + L L +N S L NL+ + L L N +
Sbjct: 95 IGTNKI--TDISALQNLTNLRELYLNEDNISD--ISPLANLTKMYSLNLGANHNLSDLSP 150
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ N+ L+ L +++++++ P + NL++L L L N + P + +L SL
Sbjct: 151 L-SNMTGLNYLTVTESKVKDVTPIA--NLTDLYSLSLNYNQIEDISP--LASLTSLHYFT 205
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
NQ+ P+ +N++ L + + NN ++ P NL L+ L + NQ+ +
Sbjct: 206 AYVNQITDITPV--ANMTRLNSLKIGNNKITDLSPL--ANLSQLTWLEIGTNQISDI--N 259
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
++ +L+ L+ L + N + + L L+ L L N L IG LT L +
Sbjct: 260 AVKDLTKLKMLNVGSNQISDISV--LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317
Query: 396 MCENHLFGLIPKSFRNLTSLERLRFNQNNL 425
+ +NH+ + P +L+ ++ F +
Sbjct: 318 LSQNHITDIRP--LASLSKMDSADFANQVI 345
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 6e-51
Identities = 73/355 (20%), Positives = 140/355 (39%), Gaps = 28/355 (7%)
Query: 292 LSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
++L + N + +L L + V+ L S+ L +
Sbjct: 2 AATLATLPAPINQIF-----PDADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGE 54
Query: 352 GFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRN 411
+ I YL +L L L N ++ + P + NL KL + + N + + +N
Sbjct: 55 KVASI--QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT--DISALQN 108
Query: 412 LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMN 471
LT+L L N++N+ + + L+L N+ ++S N L + +
Sbjct: 109 LTNLRELYLNEDNI--SDISPLANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTES 165
Query: 472 NIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS 531
+ I + + L L L+ N I P L SL+ +NQ++ P+ +
Sbjct: 166 KV--KDVTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPV--AN 219
Query: 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
+T L L + NK++ P + NLS+L +L + NQ + + L L L++ N
Sbjct: 220 MTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSN 275
Query: 592 FLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646
+ + N+ L L L++N L + + +L+ + ++ N + P
Sbjct: 276 QISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 6e-16
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
++ L L + N + ++ P ++NLS+L L++G NQ+S + + LT L+ML
Sbjct: 216 PVANMTRLNSLKIGNNKI-TDLSP-LANLSQLTWLEIGTNQISDINA--VKDLTKLKMLN 271
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN 215
N + + LS +N L L +N +G L+NL L+L+ N + P
Sbjct: 272 VGSNQISDISV--LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP- 328
Query: 216 VMGNLNSLSILDLSQNQLR 234
+ +L+ + D + ++
Sbjct: 329 -LASLSKMDSADFANQVIK 346
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 1e-53
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 29/280 (10%)
Query: 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEV 810
Y+EI + E +G+G G V KA+ A+K+ S+ +++ F+ E+
Sbjct: 7 YKEI-----EVEEV--VGRGAFGVVCKAKW-RAKDVAIKQIESE------SERKAFIVEL 52
Query: 811 LALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG 870
L+ + H NI+K +G C +V EY + GSL +L + M+
Sbjct: 53 RQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 110
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-AHVSDFGIAKFLNPHSSNWTAFAGTF 929
+ ++YLH ++H D+ N+LL + + DFG A + H T G+
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM---TNNKGSA 167
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
+ APE+ +EK DV S+G++ EVI P D + + R
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN-----GTR 222
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P ++ + S+M C + P RP+M+++ ++
Sbjct: 223 PPLIK-NLPKPIESLMT---RCWSKDPSQRPSMEEIVKIM 258
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 1e-52
Identities = 99/505 (19%), Positives = 173/505 (34%), Gaps = 83/505 (16%)
Query: 141 IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLS--- 197
I T L+ ++L +P+E + + + PP G
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 198 ----------NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL 247
L LNN L S+P + +L S L S N L +P +L +L
Sbjct: 62 VSRLRDCLDRQAHELELNNLGL-SSLPELPPHLES---LVASCNSLT-ELPELPQSLKSL 116
Query: 248 GILYLYKNSLFGFIPS---------------VIGNLKSLFELDLSENQLFGSIPLSFSNL 292
+ +L P + N L +D+ N L +P
Sbjct: 117 LVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSL-KKLP---DLP 172
Query: 293 SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNG 352
SL ++ NN L P NL L+ + N L +P + L ++ +N
Sbjct: 173 PSLEFIAAGNNQL--EELPELQNLPFLTAIYADNNSLK-KLPDLPLS---LESIVAGNNI 226
Query: 353 FYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNL 412
L E+ L L+ + N L +P +L L + + L P+ ++L
Sbjct: 227 LEEL--PELQNLPFLTTIYADNNLLK-TLPDLPPSLEALNVRDNYLTDL----PELPQSL 279
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN 472
T L+ + L PNL +L+ S N + + + L N S N
Sbjct: 280 TFLDVSENIFSGLSELP-------PNLYYLNASSNEI-RSLCDLPPS---LEELNVSNNK 328
Query: 473 IYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSL 532
+ +P +L+ L S NH+ ++P E +L +L + N L P S+
Sbjct: 329 LI-ELPALPP---RLERLIASFNHLA-EVP---ELPQNLKQLHVEYNPLR-EFPDIPESV 379
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592
+L+ N + +P+ NL + L++ N P E + +L ++
Sbjct: 380 EDLR-----MNSHLAEVPELPQNLKQ---LHVETNPLRE-FPDIPES---VEDLRMNSER 427
Query: 593 LQGEIPPQICNMESLEELNLSHNNL 617
+ + LE+ H++
Sbjct: 428 VVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 5e-50
Identities = 96/500 (19%), Positives = 174/500 (34%), Gaps = 93/500 (18%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
I P+ + + L+ ++ L+ +P E ++ Y + + P G+ +
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 177 V-------------LTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL 223
V L L + S +P +L +L + NSL +P + +L SL
Sbjct: 62 VSRLRDCLDRQAHELELNNLGLS-SLPELPPHLESL---VASCNSL-TELPELPQSLKSL 116
Query: 224 SILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFG 283
+ + + L P L L + N L +P + N L +D+ N L
Sbjct: 117 LVDNNNLKALSDLPP-------LLEYLGVSNNQL-EKLPE-LQNSSFLKIIDVDNNSL-K 166
Query: 284 SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSL 343
+P SL ++ NN L P NL L+ + N L +P +L
Sbjct: 167 KLP---DLPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLK-KLPDLPLSL--- 217
Query: 344 RTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403
++ +N L E+ L L+ + N L +P +L L + + L
Sbjct: 218 ESIVAGNNILEEL--PELQNLPFLTTIYADNNLLK-TLPDLPPSLEALNVRDNYLTDL-- 272
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKL 463
P+ ++LT L+ + L PNL +L+ S N + + + L
Sbjct: 273 --PELPQSLTFLDVSENIFSGLSELP-------PNLYYLNASSNEI-RSLCDLPPS---L 319
Query: 464 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL----NKLI---- 515
N S N + +P +L+ L S NH+ ++P + L L N L
Sbjct: 320 EELNVSNNKLI-ELPALPP---RLERLIASFNHLA-EVPELPQNLKQLHVEYNPLREFPD 374
Query: 516 -------LNLNQLSGGVPLEFGSLTEL-----------------QYLDLSANKLSSSIPK 551
L +N VP +L +L + L +++ ++
Sbjct: 375 IPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPESVEDLRMNSERVVDPYEF 434
Query: 552 SMGNLSKLHYLNLSNNQFNH 571
+ KL ++ +H
Sbjct: 435 AHETTDKLEDDVFEHHHHHH 454
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 6e-48
Identities = 99/509 (19%), Positives = 171/509 (33%), Gaps = 83/509 (16%)
Query: 165 IPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLS 224
I + + +N + +P N+ + Y + + P G ++
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 225 ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284
+ L R L L L +P + +L+ L S N L
Sbjct: 62 VSRLRDCLDR-----------QAHELELNNLGL-SSLPELPPHLE---SLVASCNSL-TE 105
Query: 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLR 344
+P +L SL + + +LS P L LG+ NQL+ + P + N S L+
Sbjct: 106 LPELPQSLKSLLVDNNNLKALSDLPP-------LLEYLGVSNNQLEKL--PELQNSSFLK 156
Query: 345 TLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL 404
+ + +N L P+ SL + N L + + NL L + N L L
Sbjct: 157 IIDVDNNSLKKL-PDLPP---SLEFIAAGNNQLEEL--PELQNLPFLTAIYADNNSLKKL 210
Query: 405 IPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLG 464
SLE + N L + + P LT + N L + P L
Sbjct: 211 PD----LPLSLESIVAGNNIL--EELPELQNLPFLTTIYADNNLL-KTLP---DLPPSLE 260
Query: 465 TFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGG 524
N N + +P L LD+S N + L+ LN + L
Sbjct: 261 ALNVRDNYL-TDLPELPQ---SLTFLDVSENIF-SGLSELPPNLYYLNASSNEIRSLC-- 313
Query: 525 VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS 584
L+ L++S NKL +P L + L S N ++P +L
Sbjct: 314 -----DLPPSLEELNVSNNKL-IELPALPPRLER---LIASFNHLA-EVPEL---PQNLK 360
Query: 585 ELDLSHNFLQGEIPPQICNME----------------SLEELNLSHNNLFDLIPGCFEEM 628
+L + +N L+ E P ++E +L++L++ N L + +
Sbjct: 361 QLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREF----PDIP 415
Query: 629 RSLSRIDIAYNELQGPIPNSTAFKDGLME 657
S+ + + + P + D L +
Sbjct: 416 ESVEDLRMNSERVVDPYEFAHETTDKLED 444
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 7e-40
Identities = 78/383 (20%), Positives = 130/383 (33%), Gaps = 54/383 (14%)
Query: 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEAL 319
FI + L E + L +P+ N+ S T + + PP G +
Sbjct: 2 FINPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREM 60
Query: 320 SELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSG 379
+ L L L + G L P +L+SL N L+
Sbjct: 61 AVSRLRDC-----------LDRQAHELELNNLGLSSL-PELPPHLESLV---ASCNSLT- 104
Query: 380 VIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439
+P +L L++ N L L P LE L + N L + + L
Sbjct: 105 ELPELPQSLKSLLVDNNNLKALSDLPP-------LLEYLGVSNNQL--EKLPELQNSSFL 155
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499
+D+ N+L P L A N + PE+ + L + +N +
Sbjct: 156 KIIDVDNNSLKKLPDL----PPSLEFIAAGNNQL--EELPELQNLPFLTAIYADNNSLK- 208
Query: 500 KIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKL 559
K+P + SL ++ N L E +L L + N L ++P +L
Sbjct: 209 KLP---DLPLSLESIVAGNNILE--ELPELQNLPFLTTIYADNNLL-KTLPDLPPSLEA- 261
Query: 560 HYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFD 619
LN+ +N +P + L L + + L P +L LN S N +
Sbjct: 262 --LNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPP-------NLYYLNASSNEIRS 311
Query: 620 LIPGCFEEMRSLSRIDIAYNELQ 642
L + SL ++++ N+L
Sbjct: 312 LC----DLPPSLEELNVSNNKLI 330
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 7e-52
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 27/278 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
E IG G G VY+A G AVK D + E ++H
Sbjct: 10 TLEEI--IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
NII G C + +V E+ G L +L K + +N +A ++YLH
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLH 122
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAH--------VSDFGIAKFLNPHSSNWTAFAGTFGY 931
+ + PI+H D+ S N+L+ + E ++DFG+A+ H + + AG + +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW--HRTTKMSAAGAYAW 180
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991
APE+ ++ DV S+GVL E++ G P + + L LP
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP--F--RGIDGLAVAYGVAMNKL--ALP 234
Query: 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
PS + +ME C P +RP+ + + L
Sbjct: 235 IPS-TCPEPFAKLME---DCWNPDPHSRPSFTNILDQL 268
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 3e-51
Identities = 101/485 (20%), Positives = 178/485 (36%), Gaps = 29/485 (5%)
Query: 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL 223
+P ++ +L + N S + +LS L L +++N + +V L
Sbjct: 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQEL 71
Query: 224 SILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF-IPSVIGNLKSLFELDLSENQLF 282
LDLS N+L I NL L L N+ I GN+ L L LS L
Sbjct: 72 EYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342
S L ++L+ ++ + + P L+ + L+I I ++S
Sbjct: 129 KSSVLPIAHLNISKVLLVLGETYGEKEDP--EGLQDFNTESLHIVFPTNKEFHFILDVSV 186
Query: 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLF 402
L + I + +K + L+ + + + L + N
Sbjct: 187 KTVAN--------LELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFI 238
Query: 403 GLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPN-----LTFLDLSQNNLYGEISFNW 457
++ T++ + L G++ D+ L+ + + S+ +
Sbjct: 239 RIL--QLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIY 296
Query: 458 RNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILN 517
F + N +++ S LD S+N + + L L LIL
Sbjct: 297 EIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQ 356
Query: 518 LNQLS--GGVPLEFGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIP 574
+NQL + + LQ LD+S N +S K L LN+S+N I
Sbjct: 357 MNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF 416
Query: 575 TEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRI 634
+ LDL N ++ IP Q+ +E+L+ELN++ N L + G F+ + SL +I
Sbjct: 417 RCL--PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKI 473
Query: 635 DIAYN 639
+ N
Sbjct: 474 WLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 173 bits (439), Expect = 4e-46
Identities = 85/431 (19%), Positives = 167/431 (38%), Gaps = 28/431 (6%)
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
+IL++SQN + + +LS L IL + N + SV + L LDLS N+L
Sbjct: 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL 81
Query: 282 FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ--GNLEALSELGLYINQLDGVIPPSIGN 339
+S +L + L N+ ++P + GN+ L LGL L+ I +
Sbjct: 82 VK---ISCHPTVNLKHLDLSFNAFD-ALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAH 137
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN 399
L+ + L + + + L+ + L + N ++++
Sbjct: 138 LNISKVLLVLGETY--GEKEDPEGLQDFNTESLHIVFPT--------NKEFHFILDVSVK 187
Query: 400 HLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRN 459
+ L + + + + + + L + L ++ + N+ + W
Sbjct: 188 TVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHT 247
Query: 460 FPKLGTFNASMNNIYGSIPPEIGDSS-----KLQVLDLSSNHIVGKIPVQFEKLFSLNKL 514
+ F+ S + G + D S L + + S+ +E ++N
Sbjct: 248 T--VWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIK 305
Query: 515 ILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH--K 572
++ L ++ +LD S N L+ ++ ++ G+L++L L L NQ K
Sbjct: 306 NFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSK 365
Query: 573 IPTEFEKLIHLSELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSL 631
I ++ L +LD+S N + + C +SL LN+S N L D I C +
Sbjct: 366 IAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRI 423
Query: 632 SRIDIAYNELQ 642
+D+ N+++
Sbjct: 424 KVLDLHSNKIK 434
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 165 bits (418), Expect = 2e-43
Identities = 92/499 (18%), Positives = 168/499 (33%), Gaps = 57/499 (11%)
Query: 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGS 164
LN+S N + I +LSKLR L + +N++ + L L N L
Sbjct: 25 ILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-K 83
Query: 165 IPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP--NVMGNLNS 222
I NL +L L+ N+ ++P GN++
Sbjct: 84 IS--------------------------CHPTVNLKHLDLSFNAF-DALPICKEFGNMSQ 116
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
L L LS L S +A+L+ +L + + L+ L
Sbjct: 117 LKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED--PEGLQDFNTESLHIVFPT 174
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342
++S T+ +L +++ + + + L N + +
Sbjct: 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNP--------KLSNLT 226
Query: 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG-----NLTKLVLVNMC 397
L + N F ++ + ++ + L G + +L L + +
Sbjct: 227 LNNIETTWNSFIRILQLV--WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVV 284
Query: 398 ENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
+ + +++ F + LD S N L + N
Sbjct: 285 SDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENC 344
Query: 458 RNFPKLGTFNASMNNIYGSIPPEIGDS---SKLQVLDLSSNHI-VGKIPVQFEKLFSLNK 513
+ +L T MN + + + LQ LD+S N + + SL
Sbjct: 345 GHLTELETLILQMNQL-KELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403
Query: 514 LILNLNQLSGGVPLEFGSLTE-LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
L ++ N L+ + F L ++ LDL +NK+ SIPK + L L LN+++NQ
Sbjct: 404 LNMSSNILTDTI---FRCLPPRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKSV 459
Query: 573 IPTEFEKLIHLSELDLSHN 591
F++L L ++ L N
Sbjct: 460 PDGIFDRLTSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 2e-41
Identities = 86/479 (17%), Positives = 168/479 (35%), Gaps = 37/479 (7%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
+P +S K L++ N +S + +I L+ LR+L N + +
Sbjct: 15 VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELE 72
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP--NVMGNLNSLSILDLSQNQLR 234
L L HN S NL +L L+ N+ ++P GN++ L L LS L
Sbjct: 73 YLDLSHNKLVK---ISCHPTVNLKHLDLSFNAF-DALPICKEFGNMSQLKFLGLSTTHLE 128
Query: 235 GSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSS 294
S +A+L+ +L + + L+ L ++S
Sbjct: 129 KSSVLPIAHLNISKVLLVLGETYGEKED--PEGLQDFNTESLHIVFPTNKEFHFILDVSV 186
Query: 295 LTLMSLFNNSLSG--------------SIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
T+ +L +++ + T L L+ + + +
Sbjct: 187 KTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWH 246
Query: 341 SSLRTLYLYDNGFYGLVPNEIGY-----LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
+++ + + G + LK+LS ++ + + + + + N
Sbjct: 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKN 306
Query: 396 MCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL--YGEI 453
+ + ++ L F+ N L V+E G L L L N L +I
Sbjct: 307 FTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKI 366
Query: 454 SFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQFEKLFSLN 512
+ L + S N++ L L++SSN + I +
Sbjct: 367 AEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPP--RIK 424
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFN 570
L L+ N++ +P + L LQ L++++N+L S +P + L+ L + L N ++
Sbjct: 425 VLDLHSNKIKS-IPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 481
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-30
Identities = 88/498 (17%), Positives = 157/498 (31%), Gaps = 105/498 (21%)
Query: 69 GIFCNLVGRVISISLSSLGLNGT-FQDFSFSSFPHLMYLNLSCNVLYGNIPPQ--ISNLS 125
+F L L L+ S +L +L+LS N + +P N+S
Sbjct: 63 SVFKFNQ------ELEYLDLSHNKLVKISCHPTVNLKHLDLSFN-AFDALPICKEFGNMS 115
Query: 126 KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIP---LEIGKLSLINVLTLCH 182
+L+ L L L I HL ++L L+ ++++ +
Sbjct: 116 QLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTN 175
Query: 183 NNFSGRIPPSLGNLSNLAYLYLNNN-----------SLFGSIPNVMGNLNSLSILDLSQN 231
F + S+ ++NL + L N + +L+ ++ + N
Sbjct: 176 KEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWN 235
Query: 232 QLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIG-----NLKSLFELDLSENQLFGSIP 286
L + + + L G + +LK+L + +
Sbjct: 236 SFIR--ILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQS 293
Query: 287 LSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTL 346
+ S++ + + + + L N L + + G+L+ L TL
Sbjct: 294 YIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETL 353
Query: 347 YLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIP 406
L N LK LSK+
Sbjct: 354 ILQMNQ-----------LKELSKI-----------------------------------A 367
Query: 407 KSFRNLTSLERLRFNQNNL-FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGT 465
+ + SL++L +QN++ + + +L L++S N L +R P
Sbjct: 368 EMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNIL---TDTIFRCLP---- 420
Query: 466 FNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGV 525
+++VLDL SN I IP Q KL +L +L + NQL
Sbjct: 421 -------------------PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVP 460
Query: 526 PLEFGSLTELQYLDLSAN 543
F LT LQ + L N
Sbjct: 461 DGIFDRLTSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 1e-28
Identities = 67/382 (17%), Positives = 128/382 (33%), Gaps = 35/382 (9%)
Query: 69 GIFCNLVGRVISISLSSLGLNGT-FQDFSFSSFPHL----MYLNLSCNVLYGNIPPQISN 123
F N+ L LGL+ T + S HL + L L P + +
Sbjct: 109 KEFGNMS------QLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQD 162
Query: 124 L--SKLRALDLGNNQLSGVIPQEIGHLTCLRM------LYFDVNHLHGSIPLEIGKLSLI 175
L + N + ++ + + L + L + SI ++ +
Sbjct: 163 FNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKL 222
Query: 176 NVLTLCHNNFSGRIPPSLGNL---SNLAYLYLNNNSL-----FGSIPNVMGNLNSLSILD 227
+ LTL + + + L + + Y ++N L F +L +LSI
Sbjct: 223 SNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQ 282
Query: 228 LSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL 287
+ + + SN+ I + + LD S N L ++
Sbjct: 283 VVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFE 342
Query: 288 SFSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQLDGVIPPSI-GNLSSL 343
+ +L+ L + L N L + +++L +L + N + SL
Sbjct: 343 NCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401
Query: 344 RTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403
+L + N + + + L+L N + IP + L L +N+ N L
Sbjct: 402 LSLNMSSNILTDTIFRCL--PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS 458
Query: 404 LIPKSFRNLTSLERLRFNQNNL 425
+ F LTSL+++ + N
Sbjct: 459 VPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-22
Identities = 57/288 (19%), Positives = 98/288 (34%), Gaps = 15/288 (5%)
Query: 5 ILNILILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISP 64
I +L F ++ T + L N +L IS
Sbjct: 197 IKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISN 256
Query: 65 CTWFGIFCNLVGRVISISLSSLGLN-------GTFQDFSFSSFPHLMYLNLSCNVLYGNI 117
G SL +L ++ G Q + + F ++ N + +
Sbjct: 257 VKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVH 316
Query: 118 PPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIG---KLSL 174
S +S LD NN L+ + + GHLT L L +N L + ++
Sbjct: 317 MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKS 375
Query: 175 INVLTLCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQL 233
+ L + N+ S +L L +++N L +I + + +LDL N++
Sbjct: 376 LQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--PPRIKVLDLHSNKI 433
Query: 234 RGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
+ SIP + L L L + N L + L SL ++ L N
Sbjct: 434 K-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 3e-51
Identities = 69/450 (15%), Positives = 132/450 (29%), Gaps = 49/450 (10%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL 271
+I + N N I ++ + L+ ++ + N+ L L N L + + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 272 FELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDG 331
L+LS N L L +LS+L + L NN + + ++ L N +
Sbjct: 61 ELLNLSSNVL--YETLDLESLSTLRTLDLNNNYVQ-ELLV----GPSIETLHAANNNISR 113
Query: 332 VIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV-IPHSIGNLTK 390
V S + +YL +N L + G + L+L N + V +
Sbjct: 114 V---SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 391 LVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY 450
L +N+ N ++ + + L+ L + N L + F +T++ L N L
Sbjct: 171 LEHLNLQYNFIYDVKGQVV--FAKLKTLDLSSNKL-AFMGPEFQSAAGVTWISLRNNKL- 226
Query: 451 GEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFS 510
I + S L+ DL N ++ +
Sbjct: 227 ------------------------VLIEKALRFSQNLEHFDLRGNGFHC-GTLRDFFSKN 261
Query: 511 LNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
+ + T A L L +
Sbjct: 262 QRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQ 321
Query: 571 H----KIPTEFEKLIHLSELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCF 625
++ E E E+D + + Q+ ++ L L + +
Sbjct: 322 GSETERLECERENQARQREIDALKEQYR-TVIDQVTLRKQAKITLEQKKKALDEQVSNGR 380
Query: 626 EEMRSLS---RIDIAYNELQGPIPNSTAFK 652
L + + ELQ + +
Sbjct: 381 RAHAELDGTLQQAVGQIELQHATEEQSPLQ 410
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 183 bits (465), Expect = 8e-50
Identities = 67/515 (13%), Positives = 155/515 (30%), Gaps = 63/515 (12%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156
+ ++ + L + + ++ LDL N LS + ++ T L +L
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV 216
N L+ ++ + LS + L L +N L ++ L+ NN++ +
Sbjct: 66 SSNVLYETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNI-SRVS-- 115
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF-IPSVIGNLKSLFELD 275
+ L+ N++ S + L L N + + + +L L+
Sbjct: 116 CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
L N ++ + + L + L +N L+ + P + ++ + L N+L +I
Sbjct: 176 LQYNFIY-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEK 231
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
++ +L L NGF+ + K+ + + + + + T L +
Sbjct: 232 ALRFSQNLEHFDLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGH 290
Query: 396 MCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISF 455
L L +L+R L +
Sbjct: 291 YGAYCCEDLPAPFADRLIALKRKE-------------------HALLSGQGSET------ 325
Query: 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI 515
+ E + ++ + +D I + + L
Sbjct: 326 -------------------ERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLE 366
Query: 516 LNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK-IP 574
L V + EL A + + S L L ++ +
Sbjct: 367 QKKKALDEQVSNGRRAHAELDGTLQQAVGQ-IELQHATEEQSPLQLLRAIVKRYEEMYVE 425
Query: 575 TEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEE 609
+ + + + D+ + ++ + ++ L
Sbjct: 426 QQSVQNNAIRDWDMYQHKET-QLAEENARLKKLNG 459
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 178 bits (452), Expect = 4e-48
Identities = 68/489 (13%), Positives = 150/489 (30%), Gaps = 22/489 (4%)
Query: 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL 223
+I + + + ++ + + N+ L L+ N L + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 224 SILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFG 283
+L+LS N L ++ +LS L L L N + + S+ L + N +
Sbjct: 61 ELLNLSSNVLYETLDLE--SLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNISR 113
Query: 284 SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS-IGNLSS 342
++ L NN ++ +G + L L +N++D V + +
Sbjct: 114 VSCSRGQGKKNI---YLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLF 402
L L L N Y + ++ L L+L N L+ + + + +++ N L
Sbjct: 171 LEHLNLQYNFIYDV-KGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKL- 226
Query: 403 GLIPKSFRNLTSLERLRFNQNNL-FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFP 461
LI K+ R +LE N G + + F + + + + P
Sbjct: 227 VLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286
Query: 462 KLGTFNASMNNIYGSIPPE---IGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNL 518
LG + A + + + +L + ++ + E ++
Sbjct: 287 TLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSET-ERLECERENQARQREIDALK 345
Query: 519 NQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578
Q + L+ L + ++L ++ E
Sbjct: 346 EQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVG-QIELQHATE 404
Query: 579 KLIHLSELDLSHN-FLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIA 637
+ L L + + + Q ++ + ++ + L + D+A
Sbjct: 405 EQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLA 464
Query: 638 YNELQGPIP 646
+
Sbjct: 465 LASANATLQ 473
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 96.1 bits (239), Expect = 8e-21
Identities = 36/295 (12%), Positives = 78/295 (26%), Gaps = 7/295 (2%)
Query: 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNH 160
L L+LS N L + P+ + + + + L NN+L +I + + L N
Sbjct: 191 AKLKTLDLSSNKL-AFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNG 248
Query: 161 LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220
H L V T+ + + + L
Sbjct: 249 FH-CGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRL 307
Query: 221 NSLSILDLSQNQLRGS----IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276
+L + + +GS + N + + K I V ++ L+
Sbjct: 308 IALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQ 367
Query: 277 SENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336
+ L + + L T+ + + +
Sbjct: 368 KKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQ 427
Query: 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKL 391
+++R +Y + L K + +L + + + L
Sbjct: 428 SVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVREQNL 482
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 4e-51
Identities = 75/290 (25%), Positives = 124/290 (42%), Gaps = 34/290 (11%)
Query: 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQD---EF 806
EI ++ ++ IGKG G V+K L + A+K E + EF
Sbjct: 18 DNEI-----EYEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEF 70
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
EV ++ + H NI+K +G N +V E++ G L L D A W+ ++
Sbjct: 71 QREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLR 126
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-----AHVSDFGIAKFLNPHSSN 921
++ +A + Y+ + PPIVH D+ S N+ L S E A V+DFG+++
Sbjct: 127 LMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV-- 183
Query: 922 WTAFAGTFGYAAPEI--AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979
+ G F + APE A TEK D +SF ++ ++ G P + ++ +
Sbjct: 184 -SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP--FDEYSYGKIKFIN 240
Query: 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ L R P D +L +++E LC P+ RP + L
Sbjct: 241 MIREEGL--RPTIPE-DCPPRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 1e-50
Identities = 59/390 (15%), Positives = 112/390 (28%), Gaps = 75/390 (19%)
Query: 235 GSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSS 294
GS + S LY ++ V+ + + D + N ++
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQA----NSNN 57
Query: 295 LTLMSLFNNSLSGSIPPTQGNL--EALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNG 352
+ + +L + + L L L P LS L+ + + G
Sbjct: 58 PQIETRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAG 115
Query: 353 FYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNL 412
L P+ + L L L RN L +P SI +L +L +++ +P+ +
Sbjct: 116 LMEL-PDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST 173
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN 472
+ NL L L +
Sbjct: 174 DASGEH---------------QGLVNLQSLRLEWTGIR---------------------- 196
Query: 473 IYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSL 532
S+P I + L+ L + ++ + + L
Sbjct: 197 ---SLPASIANLQNLKSLKIRNSPLSA-------------------------LGPAIHHL 228
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592
+L+ LDL + P G + L L L + +P + +L L +LDL
Sbjct: 229 PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCV 288
Query: 593 LQGEIPPQICNMESLEELNLSHNNLFDLIP 622
+P I + + + + + L
Sbjct: 289 NLSRLPSLIAQLPANCIILVPPHLQAQLDQ 318
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 2e-49
Identities = 54/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%)
Query: 82 SLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLS--KLRALDLGNNQLSG 139
+ N + ++ + + L + + + AL+L + L
Sbjct: 37 RHYNADRNRWHSAWRQANSNNPQIETRTGRALK-ATADLLEDATQPGRVALELRSVPLP- 94
Query: 140 VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNL 199
P + L+ L+ + D L +P + + + + LTL N +P S+ +L+ L
Sbjct: 95 QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRL 152
Query: 200 AYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259
L + +P + + L NL L L +
Sbjct: 153 RELSIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGI-R 196
Query: 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEAL 319
+P+ I NL++L L + + L ++ + +L L + L + + PP G L
Sbjct: 197 SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPL 255
Query: 320 SELGLY-INQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L L + L +P I L+ L L L +P+ I L + + + + +
Sbjct: 256 KRLILKDCSNL-LTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
Query: 379 GVIPH 383
+ H
Sbjct: 315 QLDQH 319
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 175 bits (447), Expect = 7e-49
Identities = 65/382 (17%), Positives = 115/382 (30%), Gaps = 77/382 (20%)
Query: 190 PPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGI 249
+ S LY ++ +V+ D ++ + AN +N I
Sbjct: 5 HHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQI 60
Query: 250 LYLYKNSLFGFIPSVIGNLKS--LFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307
+L ++ + L+L L P LS L M++ L
Sbjct: 61 ETRTGRAL-KATADLLEDATQPGRVALELRSVPL-PQFPDQAFRLSHLQHMTIDAAGLM- 117
Query: 308 SIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSL 367
+P ++ + L TL L N L P I L L
Sbjct: 118 ------------------------ELPDTMQQFAGLETLTLARNPLRAL-PASIASLNRL 152
Query: 368 SKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFG 427
+L + +P + + + L +L+ LR +
Sbjct: 153 RELSIRACPELTELPEPLASTD---------------ASGEHQGLVNLQSLRLEWTGI-R 196
Query: 428 KVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKL 487
+ + + NL L + + L ++ P I KL
Sbjct: 197 SLPASIANLQNLKSLKIRNSPL-------------------------SALGPAIHHLPKL 231
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLIL-NLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
+ LDL + P F L +LIL + + L +PL+ LT+L+ LDL
Sbjct: 232 EELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLDIHRLTQLEKLDLRGCVNL 290
Query: 547 SSIPKSMGNLSKLHYLNLSNNQ 568
S +P + L + + +
Sbjct: 291 SRLPSLIAQLPANCIILVPPHL 312
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 1e-44
Identities = 56/331 (16%), Positives = 101/331 (30%), Gaps = 47/331 (14%)
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS 236
L + L N N N+ I + L+ +
Sbjct: 16 NLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQA----NSNNPQIETRTGRALK-A 70
Query: 237 IPFSLANLS--NLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSS 294
L + + L L L P L L + + L +P + +
Sbjct: 71 TADLLEDATQPGRVALELRSVPL-PQFPDQAFRLSHLQHMTIDAAGL-MELPDTMQQFAG 128
Query: 295 LTLMSLFNNSLSGSIPPTQGNLEALSELGL-YINQLDGVIPPSIGN---------LSSLR 344
L ++L N L ++P + +L L EL + +L +P + + L +L+
Sbjct: 129 LETLTLARNPLR-ALPASIASLNRLRELSIRACPEL-TELPEPLASTDASGEHQGLVNLQ 186
Query: 345 TLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL 404
+L L G L P I L++L L++ + LS + +I +L KL +++
Sbjct: 187 SLRLEWTGIRSL-PASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRN 244
Query: 405 IPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLG 464
P F L+RL + + L LDL L
Sbjct: 245 YPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGC-------------VNL- 290
Query: 465 TFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495
+P I ++ + +
Sbjct: 291 ----------SRLPSLIAQLPANCIILVPPH 311
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 1e-43
Identities = 50/385 (12%), Positives = 97/385 (25%), Gaps = 75/385 (19%)
Query: 265 IGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGL 324
+ L + S + N
Sbjct: 8 HHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQA----NSNNPQIETR 63
Query: 325 YINQLDGVIPPSIGNLSS--LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIP 382
L + + + L L P++ L L + + L +P
Sbjct: 64 TGRAL-KATADLLEDATQPGRVALELRSVPLPQF-PDQAFRLSHLQHMTIDAAGLM-ELP 120
Query: 383 HSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFL 442
++ L + + N L L P S +L L L
Sbjct: 121 DTMQQFAGLETLTLARNPLRAL-PASIASLN------------------------RLREL 155
Query: 443 DLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502
+ +L +P + +
Sbjct: 156 SIRACP-------------ELT-----------ELPEPLASTD---------------AS 176
Query: 503 VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYL 562
+ + L +L L L + +P +L L+ L + + LS+ + ++ +L KL L
Sbjct: 177 GEHQGLVNLQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234
Query: 563 NLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIP 622
+L P F L L L +P I + LE+L+L +P
Sbjct: 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294
Query: 623 GCFEEMRSLSRIDIAYNELQGPIPN 647
++ + I + + +
Sbjct: 295 SLIAQLPANCIILVPPHLQAQLDQH 319
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 181 bits (460), Expect = 6e-50
Identities = 74/361 (20%), Positives = 127/361 (35%), Gaps = 18/361 (4%)
Query: 282 FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLS 341
+ I + + + + L + + + + + +
Sbjct: 10 YKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFR 69
Query: 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL 401
+ L L D + Y ++ KL + N + + PH N+ L ++ + N L
Sbjct: 70 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 129
Query: 402 FGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFP 461
L F N L L + NNL + F +L L LS N L + P
Sbjct: 130 SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL---THVDLSLIP 186
Query: 462 KLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQL 521
L N S N + + ++ LD S N I V+ L L L N L
Sbjct: 187 SLFHANVSYNLL-----STLAIPIAVEELDASHNSINV---VRGPVNVELTILKLQHNNL 238
Query: 522 SGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLI 581
+ + L +DLS N+L + + +L L +SNN+ + + +
Sbjct: 239 TD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIP 295
Query: 582 HLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNEL 641
L LDLSHN L + + LE L L HN++ L +L + +++N+
Sbjct: 296 TLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTH---HTLKNLTLSHNDW 351
Query: 642 Q 642
Sbjct: 352 D 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 5e-45
Identities = 71/430 (16%), Positives = 144/430 (33%), Gaps = 51/430 (11%)
Query: 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI 265
+ I + + + + F L+N I+ +++ +++
Sbjct: 6 RQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALL 65
Query: 266 GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLY 325
+ + + L+L++ Q+ +F+ ++ + + N++
Sbjct: 66 DSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR------------------- 106
Query: 326 INQLDGVIPPSI-GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS 384
+PP + N+ L L L N L L+ L + N+L + +
Sbjct: 107 ------YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDT 160
Query: 385 IGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDL 444
T L + + N L + + SL + N L + LD
Sbjct: 161 FQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL-----STLAIPIAVEELDA 212
Query: 445 SQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ 504
S N++ + +L NN+ + + + L +DLS N + +
Sbjct: 213 SHNSI-NVVRGP--VNVELTILKLQHNNL--TDTAWLLNYPGLVEVDLSYNELEKIMYHP 267
Query: 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNL 564
F K+ L +L ++ N+L + L + L+ LDLS N L + ++ +L L L
Sbjct: 268 FVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHL-LHVERNQPQFDRLENLYL 325
Query: 565 SNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGC 624
+N + L L LSHN CN N++ + D C
Sbjct: 326 DHNSIVT-LK--LSTHHTLKNLTLSHNDWD-------CNSLRALFRNVARPAVDDADQHC 375
Query: 625 FEEMRSLSRI 634
+ + +
Sbjct: 376 KIDYQLEHGL 385
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 2e-42
Identities = 78/418 (18%), Positives = 146/418 (34%), Gaps = 46/418 (11%)
Query: 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLN 221
+ I + + + + L+N + N+++ ++ +
Sbjct: 10 YKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFR 69
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
+ +L+L+ Q+ ++ A + LY+ N++ P V N+ L L L N L
Sbjct: 70 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 129
Query: 282 FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGNL 340
F N LT +S+ NN+L I +L L L N+L V + +
Sbjct: 130 SSLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTHV---DLSLI 185
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
SL + N + + ++ +L+ N ++ V LT L L + N+
Sbjct: 186 PSLFHANVSYNLL-----STLAIPIAVEELDASHNSINVVRGPVNVELTILKLQH---NN 237
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
L N L + + N L +Y F L L +S N L
Sbjct: 238 LTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL----------- 284
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
++ L+VLDLS NH++ + + L L L+ N
Sbjct: 285 --------------VALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNS 329
Query: 521 LSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578
+ L+ + L+ L LS N + +++ + + + + KI + E
Sbjct: 330 IV---TLKLSTHHTLKNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQHCKIDYQLE 382
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 4e-41
Identities = 74/416 (17%), Positives = 139/416 (33%), Gaps = 46/416 (11%)
Query: 141 IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS-LGNLSNL 199
I + + ++ D+ E L+ ++T ++ ++P + L + +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQV 71
Query: 200 AYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259
L LN+ + +++ L + N +R P N+ L +L L +N L
Sbjct: 72 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS 131
Query: 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEAL 319
+ N L L +S N L +F +SL + L +N L+ + + +L
Sbjct: 132 LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDL--SLIPSL 188
Query: 320 SELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSG 379
+ N L ++ ++ L N + L+ L+L N+L+
Sbjct: 189 FHANVSYNLLS-----TLAIPIAVEELDASHNSINVV---RGPVNVELTILKLQHNNLTD 240
Query: 380 VIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439
+ N LV V++ N L ++ F + LERL + N L + P L
Sbjct: 241 T--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL-VALNLYGQPIPTL 297
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499
LDLS N+L + +L+ L L N IV
Sbjct: 298 KVLDLSHNHLL-------------------------HVERNQPQFDRLENLYLDHNSIV- 331
Query: 500 KIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGN 555
++ +L L L+ N + + I + +
Sbjct: 332 --TLKLSTHHTLKNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQHCKIDYQLEH 383
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 5e-41
Identities = 63/361 (17%), Positives = 125/361 (34%), Gaps = 22/361 (6%)
Query: 91 TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTC 150
D + +++ + L+ + + N+ + + +
Sbjct: 11 KCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQ 70
Query: 151 LRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPS-LGNLSNLAYLYLNNNS 208
+ +L + + I I L + N +PP N+ L L L N
Sbjct: 71 VELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERND 128
Query: 209 LFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNL 268
L + N L+ L +S N L + ++L L L N L + + +
Sbjct: 129 LSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL-THVD--LSLI 185
Query: 269 KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ 328
SLF ++S N L + + ++ + +NS++ + L+ L L N
Sbjct: 186 PSLFHANVSYNLL-----STLAIPIAVEELDASHNSIN-VVRG--PVNVELTILKLQHNN 237
Query: 329 LDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL 388
L + N L + L N ++ + ++ L +L + N L + +
Sbjct: 238 LTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPI 294
Query: 389 TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNN 448
L ++++ NHL + ++ LE L + N++ V H L L LS N+
Sbjct: 295 PTLKVLDLSHNHL-LHVERNQPQFDRLENLYLDHNSI---VTLKLSTHHTLKNLTLSHND 350
Query: 449 L 449
Sbjct: 351 W 351
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 4e-34
Identities = 68/346 (19%), Positives = 122/346 (35%), Gaps = 46/346 (13%)
Query: 82 SLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQ 136
+ + SF + LNL+ + I + ++ L +G N
Sbjct: 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI-EEIDTYAFAYAHTIQKLYMGFNA 104
Query: 137 LSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNL 196
+ + P ++ L +L + N L S+P N
Sbjct: 105 IRYLPPHVFQNVPLLTVLVLERNDLS-SLP-----------------------RGIFHNT 140
Query: 197 SNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256
L L ++NN+L + SL L LS N+L + S + +L + N
Sbjct: 141 PKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLS--LIPSLFHANVSYNL 197
Query: 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNL 316
L S + ++ ELD S N + + LT++ L +N+L+ N
Sbjct: 198 L-----STLAIPIAVEELDASHNSI---NVVRGPVNVELTILKLQHNNLTD--TAWLLNY 247
Query: 317 EALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNH 376
L E+ L N+L+ ++ + L LY+ +N L + +L L+L NH
Sbjct: 248 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNH 306
Query: 377 LSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQ 422
L + + +L + + N + L + L +L L N
Sbjct: 307 LL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNL-TLSHND 350
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 7e-22
Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 17/218 (7%)
Query: 82 SLSSLGLNGT-FQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV 140
SL +L L+ S P L + N+S N+L ++ + LD +N ++ V
Sbjct: 166 SLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSINVV 220
Query: 141 IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200
L +L N+L + + + L +N + + L
Sbjct: 221 ---RGPVNVELTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 275
Query: 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260
LY++NN L ++ + +L +LDLS N L + + L LYL NS+
Sbjct: 276 RLYISNNRL-VALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI-VT 332
Query: 261 IPSVIGNLKSLFELDLSENQL-FGSIPLSFSNLSSLTL 297
+ + +L L LS N S+ F N++ +
Sbjct: 333 LK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAV 368
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 2e-47
Identities = 74/367 (20%), Positives = 128/367 (34%), Gaps = 18/367 (4%)
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
+ I + + + + L + + + +
Sbjct: 10 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAA 69
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
+ + + L L D + Y ++ KL + N + + PH N+ L ++
Sbjct: 70 LLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129
Query: 396 MCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISF 455
+ N L L F N L L + NNL + F +L L LS N L +
Sbjct: 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL-THVDL 188
Query: 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI 515
+ P L N S N + + ++ LD S N I V+ L L
Sbjct: 189 S--LIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSINV---VRGPVNVELTILK 238
Query: 516 LNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
L N L+ + L +DLS N+L + + +L L +SNN+ +
Sbjct: 239 LQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNL 295
Query: 576 EFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRID 635
+ + L LDLSHN L + + LE L L HN++ L +L +
Sbjct: 296 YGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTH---HTLKNLT 351
Query: 636 IAYNELQ 642
+++N+
Sbjct: 352 LSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 5e-41
Identities = 81/447 (18%), Positives = 148/447 (33%), Gaps = 75/447 (16%)
Query: 189 IPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG 248
I +L ++++ + LN+ I+ + +R L + +
Sbjct: 19 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78
Query: 249 ILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGS 308
+L L + ++ +L + N + P F N+ LT++ L N LS S
Sbjct: 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-S 137
Query: 309 IPP-TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSL 367
+P N L+ L + N L+ + + +SL+ L L N + ++ + SL
Sbjct: 138 LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSL 194
Query: 368 SKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFG 427
+ N LS + ++E L + N++
Sbjct: 195 FHANVSYNLLS-----------------------------TLAIPIAVEELDASHNSINV 225
Query: 428 KVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKL 487
LT L L NNL + + + L
Sbjct: 226 VRGPVN---VELTILKLQHNNL--------------------------TDTAWLLNYPGL 256
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS 547
+DLS N + + F K+ L +L ++ N+L + L + L+ LDLS N L
Sbjct: 257 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHL-L 314
Query: 548 SIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESL 607
+ ++ +L L L +N + L L LSHN CN
Sbjct: 315 HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWD-------CNSLRA 364
Query: 608 EELNLSHNNLFDLIPGCFEEMRSLSRI 634
N++ + D C + + +
Sbjct: 365 LFRNVARPAVDDADQHCKIDYQLEHGL 391
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 2e-40
Identities = 82/451 (18%), Positives = 156/451 (34%), Gaps = 46/451 (10%)
Query: 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLN 221
+ I + + + + L+N + N+++ ++ +
Sbjct: 16 YKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFR 75
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
+ +L+L+ Q+ ++ A + LY+ N++ P V N+ L L L N L
Sbjct: 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 135
Query: 282 FGSIPLSFSNLSSLTLMSLFNNSLSGSIPP-TQGNLEALSELGLYINQLDGVIPPSIGNL 340
F N LT +S+ NN+L I T +L L L N+L V + +
Sbjct: 136 SSLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTHV---DLSLI 191
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
SL + N + + ++ +L+ N ++ V LT L L + N+
Sbjct: 192 PSLFHANVSYNLL-----STLAIPIAVEELDASHNSINVVRGPVNVELTILKLQH---NN 243
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
L N L + + N L +Y F L L +S N L
Sbjct: 244 LTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL----------- 290
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
++ L+VLDLS NH++ + + L L L+ N
Sbjct: 291 --------------VALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNS 335
Query: 521 LSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580
+ L+ + L+ L LS N + +++ + + + + KI + E
Sbjct: 336 IV---TLKLSTHHTLKNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQHCKIDYQLEHG 390
Query: 581 IHLSELDLSHNFLQGEIPPQICNMESLEELN 611
+ E D + + +E ++
Sbjct: 391 LCCKESDKPYLDRLLQYIALTSVVEKVQRAQ 421
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 5e-40
Identities = 83/560 (14%), Positives = 180/560 (32%), Gaps = 55/560 (9%)
Query: 103 LMYLNLSCNVLYGNIP--PQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNH 160
++ ++ ++ ++ + L+ + + N+ + + + + +L +
Sbjct: 27 CVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ 86
Query: 161 LHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPS-LGNLSNLAYLYLNNNSLFGSIPNVMG 218
+ I I L + N +PP N+ L L L N L +
Sbjct: 87 IE-EIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFH 144
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
N L+ L +S N L + ++L L L N L + + + SLF ++S
Sbjct: 145 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL-THVD--LSLIPSLFHANVSY 201
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
N L + + ++ + +NS++ + L+ L L N L +
Sbjct: 202 NLL-----STLAIPIAVEELDASHNSIN-VVRG--PVNVELTILKLQHNNLTDT--AWLL 251
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398
N L + L N ++ + ++ L +L + N L + + L ++++
Sbjct: 252 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSH 310
Query: 399 NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWR 458
NHL + ++ LE L + N++ V H L L LS N+
Sbjct: 311 NHLLH-VERNQPQFDRLENLYLDHNSI---VTLKLSTHHTLKNLTLSHNDWDCNSLRAL- 365
Query: 459 NFPKLGTFNASMNNIYGSIPPEIGDS----------SKLQVLDLSSNHIVGKIPVQFEKL 508
F + + + I ++ + ++ +V K+ +
Sbjct: 366 -FRNVARPAVDDADQHCKIDYQLEHGLCCKESDKPYLDRLLQYIALTSVVEKVQRAQGRC 424
Query: 509 FSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPK-------SMGNLSKLHY 561
+ + + + L + L+ N+L + + + L LH
Sbjct: 425 SATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNELRAEVQQLTNEQIQQEQLLQGLHA 484
Query: 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSH------------NFLQGEIPPQICNMESLEE 609
+N + + +H + E + E LE+
Sbjct: 485 EIDTNLRRYRLPKDGLARSSDNLNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQ 544
Query: 610 LNLSHNNLFDLIPGCFEEMR 629
N++ D E+R
Sbjct: 545 ENIALEKQLDNKRAKQAELR 564
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-39
Identities = 94/538 (17%), Positives = 182/538 (33%), Gaps = 35/538 (6%)
Query: 141 IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS-LGNLSNL 199
I + + ++ D+ E L+ ++T ++ ++P + L + +
Sbjct: 19 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQV 77
Query: 200 AYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259
L LN+ + +++ L + N +R P N+ L +L L +N L
Sbjct: 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS 137
Query: 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEAL 319
+ N L L +S N L +F +SL + L +N L+ + + +L
Sbjct: 138 LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDL--SLIPSL 194
Query: 320 SELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSG 379
+ N L ++ ++ L N + L+ L+L N+L+
Sbjct: 195 FHANVSYNLLS-----TLAIPIAVEELDASHNSINVV---RGPVNVELTILKLQHNNLTD 246
Query: 380 VIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439
+ N LV V++ N L ++ F + LERL + N L + P L
Sbjct: 247 T--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL-VALNLYGQPIPTL 303
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499
LDLS N+L + N F +L N+I ++ L+ L LS N
Sbjct: 304 KVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI-VTLKL--STHHTLKNLTLSHNDWDC 359
Query: 500 KIPVQFEKLFSLNKLILNLNQLSGGVPLEFG--------SLTELQYLDLSANKLSSSIPK 551
+ + + LE G + ++ + + +
Sbjct: 360 NSLRALFRNVARPAVDDADQHCKIDYQLEHGLCCKESDKPYLDRLLQYIALTSVVEKVQR 419
Query: 552 SMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEI----PPQICNMESL 607
+ G S +N + ++ L +L+ N L+ E+ QI + L
Sbjct: 420 AQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNELRAEVQQLTNEQIQQEQLL 479
Query: 608 EELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLMEGNKGLCGN 665
+ L+ + L+R N++ + AFK + +
Sbjct: 480 QGLHAEIDTNLRRYR---LPKDGLARSSDNLNKVFTHLKERQAFKLRETQARRTEADA 534
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-33
Identities = 90/556 (16%), Positives = 179/556 (32%), Gaps = 47/556 (8%)
Query: 82 SLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQ 136
+ + SF + LNL+ + I + ++ L +G N
Sbjct: 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI-EEIDTYAFAYAHTIQKLYMGFNA 110
Query: 137 LSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPS-LG 194
+ + P ++ L +L + N L S+P I + L++ +NN RI
Sbjct: 111 IRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQ 168
Query: 195 NLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYK 254
++L L L++N L + + + SL ++S N L +LA + L
Sbjct: 169 ATTSLQNLQLSSNRL-THVD--LSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASH 220
Query: 255 NSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ- 313
NS+ + L L L N L N L + L N L I
Sbjct: 221 NSI-NVVRG--PVNVELTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELE-KIMYHPF 274
Query: 314 GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELC 373
++ L L + N+L + + +L+ L L N + L L L
Sbjct: 275 VKMQRLERLYISNNRL-VALNLYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLENLYLD 332
Query: 374 RNHLSGVIPHSIGNLTKLVLVNMCENHL-FGLIPKSFRNLTSLERLRFNQN-----NLFG 427
N + + + L + + N + FRN+ +Q+ L
Sbjct: 333 HNSIVTL---KLSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKIDYQLEH 389
Query: 428 KVYEAFGDHPNLTFL--DLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSS 485
+ D P L L ++ ++ ++ T N+ + +
Sbjct: 390 GLCCKESDKPYLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQ 449
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545
+ L+ N + ++ + +L+ L+ +L + +
Sbjct: 450 GNEQLEAEVNELRAEVQQLTNEQIQQEQLLQGLHA------EIDTNLRRYRLPKDGLARS 503
Query: 546 SSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ-ICNM 604
S ++ K +L + L Q + K +L+ + L+ ++ +
Sbjct: 504 SDNLNKVFTHLKERQAFKLRETQA--RRTEADAKQKETEDLEQENIALEKQLDNKRAKQA 561
Query: 605 ESLEELNLSHNNLFDL 620
E +E +L + L
Sbjct: 562 ELRQETSLKRQKVKQL 577
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 2e-17
Identities = 53/288 (18%), Positives = 103/288 (35%), Gaps = 24/288 (8%)
Query: 79 ISISLSSLGLNGT-FQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQL 137
I I++ L + L L L N L + N L +DL N+L
Sbjct: 209 IPIAVEELDASHNSINVVRGPVNVELTILKLQHNNL--TDTAWLLNYPGLVEVDLSYNEL 266
Query: 138 SGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLS 197
++ + L LY N L ++ L + + VL L HN+ + +
Sbjct: 267 EKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFD 324
Query: 198 NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNS 256
L LYL++NS+ ++ + ++L L LS N S+ N++ + ++
Sbjct: 325 RLENLYLDHNSI-VTLK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHC 381
Query: 257 LFGFI------------PSVIGNLKSLFELDLSEN-QLFGSIPLSFSNLSSLTLMSLFNN 303
+ P + L+ + + E Q + ++S+ +S +
Sbjct: 382 KIDYQLEHGLCCKESDKPYLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYIT 441
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
G P QGN + +E+ ++ + I L+ L+ +
Sbjct: 442 QQGGV--PLQGNEQLEAEVNELRAEVQQLTNEQIQQEQLLQGLHAEID 487
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 2e-08
Identities = 11/109 (10%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Query: 534 ELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
+ +Y I ++ + +++ + E L + + ++ +
Sbjct: 4 QQRYNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTM 63
Query: 594 QGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNEL 641
+ ++P + + +E LNL+ + ++ F ++ ++ + +N +
Sbjct: 64 R-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAI 111
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 3e-46
Identities = 72/284 (25%), Positives = 116/284 (40%), Gaps = 35/284 (12%)
Query: 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
GE +GKG G K +G + +K+ FDE Q FL EV + + H
Sbjct: 14 HGEV--LGKGCFGQAIKVTHRETGEVMVMKELIR---FDEE-TQRTFLKEVKVMRCLEHP 67
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
N++KF G + ++EY+ G+L I+K ++ W+QR++ K +A+ ++YLH
Sbjct: 68 NVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--------------NPHSSNWTAF 925
I+H D++S N L+ V+DFG+A+ + P
Sbjct: 126 S---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985
G + APE+ + EK DV SFG++ E+I + M +N
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY-----LPRTMDFGLNVR 237
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P + I C PE RP+ K+ + L
Sbjct: 238 GFLDRYCPP-NCPPSFFPITV---RCCDLDPEKRPSFVKLEHWL 277
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 168 bits (426), Expect = 4e-46
Identities = 72/320 (22%), Positives = 119/320 (37%), Gaps = 56/320 (17%)
Query: 749 FLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLN 808
E +D+ IG+GR G+VYK L AVK F+ ++ F+N
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-------NRQNFIN 54
Query: 809 E--VLALTEIRHRNIIKFHGFC-----SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGW 861
E + + + H NI +F +V EY GSL L W
Sbjct: 55 EKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL----HTSDW 110
Query: 862 NQRMNVIKGVANALSYLHHD------CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915
+ V L+YLH + P I H D++S+NVL+ ++ +SDFG++ L
Sbjct: 111 VSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170
Query: 916 NPHSSNW--------TAFAGTFGYAAPEIA-------HMMRATEKYDVHSFGVLALEVI- 959
+ + GT Y APE+ A ++ D+++ G++ E+
Sbjct: 171 TGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
Query: 960 ------KGNHPRDY------VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK--LMSIM 1005
G +Y N +F +M +++ R P + + S+
Sbjct: 231 RCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSRE-KQRPKFPEAWKENSLAVRSLK 289
Query: 1006 EVAILCLVESPEARPTMKKV 1025
E C + EAR T +
Sbjct: 290 ETIEDCWDQDAEARLTAQXA 309
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 1e-45
Identities = 63/295 (21%), Positives = 116/295 (39%), Gaps = 45/295 (15%)
Query: 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEV 810
+E++ + GE IGKGR G VY G + A++ + + ++ F EV
Sbjct: 32 FEQL-----EIGEL--IGKGRFGQVYHGRW-HGEV-AIRLIDIERDNEDQLK--AFKREV 80
Query: 811 LALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG 870
+A + RH N++ F G C + H I++ +L ++++D A N+ + +
Sbjct: 81 MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQE 138
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-----FLNPHSSNWTAF 925
+ + YLH I+H D+ SKNV D + ++DFG+
Sbjct: 139 IVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 926 AGTFGYAAPEIAHMMRA---------TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS 976
G + APEI + ++ DV + G + E+ P F +
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP-------FKTQP 247
Query: 977 NM--ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
I ++ + + + ++ I+ C E RPT K+ ++L
Sbjct: 248 AEAIIWQMGTGM--KPNLSQIGMGKEISDILL---FCWAFEQEERPTFTKLMDML 297
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 2e-45
Identities = 51/275 (18%), Positives = 100/275 (36%), Gaps = 27/275 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+F K + + G ++K G VK + + +F E L H
Sbjct: 13 NFLTK--LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSR--DFNEECPRLRIFSHP 67
Query: 820 NIIKFHGFCSN--AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
N++ G C + A H +++ ++ GSL +L + +Q + +A +++
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAF 126
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI- 936
LH P I ++S++V++D + A +S + + APE
Sbjct: 127 LHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-----PGRMYAPAWVAPEAL 180
Query: 937 --AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
D+ SF VL E++ P + + + + L R P
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVP--FADLSNMEIGMKV--ALEGL--RPTIPP 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ + +M+ +C+ E P RP + +L
Sbjct: 235 -GISPHVSKLMK---ICMNEDPAKRPKFDMIVPIL 265
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 3e-45
Identities = 69/299 (23%), Positives = 125/299 (41%), Gaps = 51/299 (17%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALTEIRHRNIIK 823
C+GKGR G V++ G AVK F+S+ D+ + E + +RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILG 66
Query: 824 FHGFCSNAQHS----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
F ++HS ++++ Y + GSL L+ + ++ +A+ L++LH
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLH 122
Query: 880 HDCL-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS----NWTAFAGTFG 930
+ P I H D+ SKN+L+ + ++D G+A + ++ GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 931 YAAPEI------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVST----------NFSS 974
Y APE+ + ++ D+ +FG++ EV + V N S
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS 242
Query: 975 FSNMITEINQNLDHRLPTPSR----DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
F +M + + R P+R + L +M+ C ++P AR T ++ L
Sbjct: 243 FEDMRKVVCVD-QQRPNIPNRWFSDPTLTSLAKLMK---ECWYQNPSARLTALRIKKTL 297
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 4e-45
Identities = 94/415 (22%), Positives = 155/415 (37%), Gaps = 40/415 (9%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPS-VIGNLKS 270
+P + ++ +DLS N + S + L +L L + + + I + L S
Sbjct: 24 QVPEL---PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS 80
Query: 271 LFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSL-SGSIPPTQ-GNLEALSELGLYIN 327
L L L NQ + F+ L++L +++L +L + L +L L L N
Sbjct: 81 LIILKLDYNQF-LQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDN 139
Query: 328 QLDGVIPPSI-GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG 386
+ + P S N+ L L N + ++ + L
Sbjct: 140 NIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLL-------------- 185
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFL-DLS 445
L+ + L +M E L + TS+ L + N + + F D T + L
Sbjct: 186 RLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLI 245
Query: 446 QNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ- 504
+N Y S F N + + S ++ DLS + I +
Sbjct: 246 LSNSYNMGSSFGHT-----NFKDPDNFTFKGLEA-----SGVKTCDLSKSKI-FALLKSV 294
Query: 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNL 564
F L +L L N+++ F LT L L+LS N L S + NL KL L+L
Sbjct: 295 FSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354
Query: 565 SNNQFNHKIPTE-FEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNL 617
S N + + F L +L EL L N L+ +P I + SL+++ L N
Sbjct: 355 SYNHIRA-LGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 3e-42
Identities = 85/417 (20%), Positives = 150/417 (35%), Gaps = 61/417 (14%)
Query: 175 INVLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQ 232
+N + L N+ + + S L +L +L + + I N L+SL IL L NQ
Sbjct: 32 VNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90
Query: 233 LRGSIPFS-LANLSNLGILYLYKNSLFGFI--PSVIGNLKSLFELDLSENQLFGSIPLS- 288
+ L+NL +L L + +L G + + L SL L L +N + P S
Sbjct: 91 FL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF 149
Query: 289 FSNLSSLTLMSLFNNSLSGSIPP-----------TQGNLEALSELGLYINQLDGVIPPSI 337
F N+ ++ L N + SI T L +++ + L +
Sbjct: 150 FLNMRRFHVLDLTFNKVK-SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208
Query: 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMC 397
+S+ TL L NGF + + +K++ + + + +
Sbjct: 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL-----------SNSYNMGSSFG 257
Query: 398 ENHLFGLIPKSFRNL--TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISF 455
+ +F+ L + ++ +++ +F + F +L L L+QN +
Sbjct: 258 HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEI------ 311
Query: 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNK 513
I + L L+LS N + G I + FE L L
Sbjct: 312 -------------------NKIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEV 351
Query: 514 LILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L L+ N + F L L+ L L N+L S L+ L + L N ++
Sbjct: 352 LDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 408
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 8e-39
Identities = 84/403 (20%), Positives = 148/403 (36%), Gaps = 64/403 (15%)
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPP-TQGNLEAL 319
+P + ++ + DLS N + SFS L L + + + I T L +L
Sbjct: 25 VPELPAHVNYV---DLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81
Query: 320 SELGLYINQLDGVIPPSI-GNLSSLRTLYLYDNGF--YGLVPNEIGYLKSLSKLELCRNH 376
L L NQ + L++L L L L N L SL L L N+
Sbjct: 82 IILKLDYNQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNN 140
Query: 377 LSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGD 435
+ + P S N+ + ++++ N + + + N
Sbjct: 141 IKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGK-------------------- 180
Query: 436 HPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495
+ T L LS L +++ W + K G + + + LDLS N
Sbjct: 181 --HFTLLRLSSITLQ-DMNEYWLGWEKCGNPFKNTS---------------ITTLDLSGN 222
Query: 496 HIVGKIPVQFEKLFSLNKLI-------------LNLNQLSGGVPLEFGSL--TELQYLDL 540
+ +F + K+ F L + ++ DL
Sbjct: 223 GFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDL 282
Query: 541 SANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ 600
S +K+ + + + + L L L+ N+ N F L HL +L+LS NFL I +
Sbjct: 283 SKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLG-SIDSR 341
Query: 601 IC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
+ N++ LE L+LS+N++ L F + +L + + N+L+
Sbjct: 342 MFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK 384
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-31
Identities = 67/362 (18%), Positives = 122/362 (33%), Gaps = 35/362 (9%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRML 154
SFS L +L + I LS L L L NQ + L L +L
Sbjct: 49 SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108
Query: 155 YFDVNHLHGSIPLEIG---KLSLINVLTLCHNNFSGRIPPS--LGNLSNLAYLYLNNNSL 209
+L L L+ + +L L NN +I P+ N+ L L N +
Sbjct: 109 TLTQCNLD-GAVLSGNFFKPLTSLEMLVLRDNNIK-KIQPASFFLNMRRFHVLDLTFNKV 166
Query: 210 ----------FGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259
F + L+S+++ D+++ L + +++ L L N
Sbjct: 167 KSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKE 226
Query: 260 FIPSVIGNLKSLFEL-------------DLSENQLFGSIPLSFSNL--SSLTLMSLFNNS 304
+ + + ++ +F L S + L +
Sbjct: 227 SMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSK 286
Query: 305 LSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
+ ++ + + L +L L N+++ + + L+ L L L N +
Sbjct: 287 IF-ALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345
Query: 364 LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
L L L+L NH+ + S L L + + N L + F LTSL+++ + N
Sbjct: 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405
Query: 424 NL 425
Sbjct: 406 PW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 1e-19
Identities = 50/236 (21%), Positives = 71/236 (30%), Gaps = 25/236 (10%)
Query: 94 DFSFSSFPHLMYLNLSCNVLYGNIPPQIS--------NLSKLRALDLGNNQLSGVIPQEI 145
D H L LS L + + + LDL N + +
Sbjct: 173 DLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRF 232
Query: 146 GHLTCLRMLY-------------FDVNHLHGSIPLEIGKLSLINVLTL-CHNNFSGRIPP 191
+ F + L V T + +
Sbjct: 233 FDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLK 292
Query: 192 SL-GNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGIL 250
S+ + ++L L L N + N L L L+LSQN L NL L +L
Sbjct: 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVL 352
Query: 251 YLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSL 305
L N + L +L EL L NQL S+P F L+SL + L N
Sbjct: 353 DLSYNHIRALGDQSFLGLPNLKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPW 407
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 2e-44
Identities = 68/314 (21%), Positives = 120/314 (38%), Gaps = 54/314 (17%)
Query: 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNE- 809
I + I E IGKGR G V++ + G AVK F+S+ ++ + E
Sbjct: 37 QRTIARTIV-LQES--IGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREA 85
Query: 810 -VLALTEIRHRNIIKFHGFCSNAQHS----FIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
+ +RH NI+ F + + ++VS+Y + GSL L
Sbjct: 86 EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGM 141
Query: 865 MNVIKGVANALSYLHHD-----CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ + A+ L++LH + P I H D+ SKN+L+ ++D G+A + +
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 201
Query: 920 S----NWTAFAGTFGYAAPEI------AHMMRATEKYDVHSFGV----LALEVIKGNHPR 965
GT Y APE+ + ++ D+++ G+ +A G
Sbjct: 202 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261
Query: 966 DY------VSTNFSSFSNMITEINQNLDHRLPTPSR----DVMDKLMSIMEVAILCLVES 1015
DY + + S M + + R P+R + + + IM C +
Sbjct: 262 DYQLPYYDLVPSDPSVEEMRKVVCEQ-KLRPNIPNRWQSCEALRVMAKIMR---ECWYAN 317
Query: 1016 PEARPTMKKVCNLL 1029
AR T ++ L
Sbjct: 318 GAARLTALRIKKTL 331
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 2e-44
Identities = 73/352 (20%), Positives = 143/352 (40%), Gaps = 31/352 (8%)
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+ + + ++P + + +L L KN + + L EL+L+EN
Sbjct: 11 AQDRAVLCHRKRFV-AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENI 67
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGN 339
+ P +F+NL +L + L +N L IP L L++L + N++ ++ +
Sbjct: 68 VSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQD 126
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN 399
L +L++L + DN + L SL +L L + +L+ + ++ +L L+++ +
Sbjct: 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186
Query: 400 HLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRN 459
++ + SF+ L L+ L + + NLT L ++ NL
Sbjct: 187 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL---------- 236
Query: 460 FPKLGTFNASMNNIYGSIPPE-IGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNL 518
++P + L+ L+LS N I +L L ++ L
Sbjct: 237 ---------------TAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281
Query: 519 NQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
QL+ P F L L+ L++S N+L++ ++ L L L +N
Sbjct: 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 166 bits (421), Expect = 5e-44
Identities = 72/323 (22%), Positives = 128/323 (39%), Gaps = 5/323 (1%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDG 331
+ + ++P + L+ L N + ++ + + L EL L N +
Sbjct: 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSA 70
Query: 332 VIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKL 391
V P + NL +LRTL L N + L +L+KL++ N + ++ + +L L
Sbjct: 71 VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNL 130
Query: 392 VLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451
+ + +N L + ++F L SLE+L + NL EA L L L N+
Sbjct: 131 KSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190
Query: 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL 511
++++ +L S ++ P L L ++ ++ + L L
Sbjct: 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH 571
L L+ N +S L LQ + L +L+ P + L+ L LN+S NQ
Sbjct: 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310
Query: 572 KIPTEFEKLIHLSELDLSHNFLQ 594
+ F + +L L L N L
Sbjct: 311 LEESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 1e-43
Identities = 73/327 (22%), Positives = 121/327 (37%), Gaps = 30/327 (9%)
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L L N++ + + L L L +N + P L +L L L N L
Sbjct: 34 TRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 93
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPN 438
+ L+ L +++ EN + L+ F++L +L+ L N+L + AF +
Sbjct: 94 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 153
Query: 439 LTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI-GDSSKLQVLDLSSNHI 497
L L L + NL SIP E L VL L +I
Sbjct: 154 LEQLTLEKCNL-------------------------TSIPTEALSHLHGLIVLRLRHLNI 188
Query: 498 VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM-GNL 556
F++L+ L L ++ + L L ++ L++ +P +L
Sbjct: 189 NAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VPYLAVRHL 247
Query: 557 SKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHN 615
L +LNLS N + + +L+ L E+ L L + P + L LN+S N
Sbjct: 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGN 306
Query: 616 NLFDLIPGCFEEMRSLSRIDIAYNELQ 642
L L F + +L + + N L
Sbjct: 307 QLTTLEESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 6e-41
Identities = 73/312 (23%), Positives = 128/312 (41%), Gaps = 8/312 (2%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLI 175
+P I ++ R LDLG N++ + E L L + N + ++ L +
Sbjct: 26 VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS-AVEPGAFNNLFNL 82
Query: 176 NVLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLR 234
L L N IP LSNL L ++ N + + + +L +L L++ N L
Sbjct: 83 RTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV 141
Query: 235 GSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLS 293
I + + L++L L L K +L + +L L L L + SF L
Sbjct: 142 -YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 200
Query: 294 SLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGF 353
L ++ + + ++ P L+ L + L V ++ +L LR L L N
Sbjct: 201 RLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI 260
Query: 354 YGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLT 413
+ + + L L +++L L+ V P++ L L ++N+ N L L F ++
Sbjct: 261 STIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG 320
Query: 414 SLERLRFNQNNL 425
+LE L + N L
Sbjct: 321 NLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 4e-35
Identities = 66/282 (23%), Positives = 103/282 (36%), Gaps = 33/282 (11%)
Query: 374 RNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEA 432
R +P I L L N + L F + LE L N+N + A
Sbjct: 20 RKRFV-AVPEGIPTETRLLDLGK---NRIKTLNQDEFASFPHLEELELNENIVSAVEPGA 75
Query: 433 FGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI-GDSSKLQVLD 491
F + NL L L N L IP + S L LD
Sbjct: 76 FNNLFNLRTLGLRSNRL-------------------------KLIPLGVFTGLSNLTKLD 110
Query: 492 LSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPK 551
+S N IV + F+ L++L L + N L F L L+ L L L+S +
Sbjct: 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170
Query: 552 SMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELN 611
++ +L L L L + N F++L L L++SH + P +L L+
Sbjct: 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLS 230
Query: 612 LSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKD 653
++H NL + + L ++++YN + I S +
Sbjct: 231 ITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST-IEGS-MLHE 270
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 3e-33
Identities = 66/278 (23%), Positives = 107/278 (38%), Gaps = 12/278 (4%)
Query: 82 SLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQ 136
L L LN + +F++ +L L L N L IP + + LS L LD+ N+
Sbjct: 57 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL-KLIPLGVFTGLSNLTKLDISENK 115
Query: 137 LSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPP-SLG 194
+ ++ L L+ L N L I L+ + LTL N + IP +L
Sbjct: 116 IVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLT-SIPTEALS 173
Query: 195 NLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYK 254
+L L L L + ++ L L +L++S ++ + NL L +
Sbjct: 174 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH 233
Query: 255 NSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPP-TQ 313
+L + +L L L+LS N + L L + L L+ + P
Sbjct: 234 CNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLA-VVEPYAF 292
Query: 314 GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
L L L + NQL + ++ +L TL L N
Sbjct: 293 RGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 3e-30
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 10/232 (4%)
Query: 82 SLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQ 136
+L+ L ++ D+ F +L L + N L I + S L+ L L L
Sbjct: 105 NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL-VYISHRAFSGLNSLEQLTLEKCN 163
Query: 137 LSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNL 196
L+ + + + HL L +L +++ +L + VL + H + + P+
Sbjct: 164 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG 223
Query: 197 SNLAYLYLNNNSLFGSIPNVM-GNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN 255
NL L + + +L ++P + +L L L+LS N + L L L + L
Sbjct: 224 LNLTSLSITHCNL-TAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGG 282
Query: 256 SLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSLS 306
L P L L L++S NQL ++ S F ++ +L + L +N L+
Sbjct: 283 QLAVVEPYAFRGLNYLRVLNVSGNQL-TTLEESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 2e-14
Identities = 45/195 (23%), Positives = 65/195 (33%), Gaps = 38/195 (19%)
Query: 69 GIFCNLVGRVISISLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNL 124
+L L L L +D+SF L L +S + P
Sbjct: 170 EALSHL------HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG 223
Query: 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184
L +L + + L+ V + HL LR L L +N
Sbjct: 224 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLN------------------------LSYNP 259
Query: 185 FSGRIPP-SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSL-A 242
S I L L L + L L P LN L +L++S NQL ++ S+
Sbjct: 260 IS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFH 317
Query: 243 NLSNLGILYLYKNSL 257
++ NL L L N L
Sbjct: 318 SVGNLETLILDSNPL 332
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 2e-43
Identities = 65/316 (20%), Positives = 119/316 (37%), Gaps = 53/316 (16%)
Query: 749 FLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLN 808
L + I ++ IGKGR G V+ + G AVK F + ++ +
Sbjct: 29 LLVQRTIAKQIQMVKQ--IGKGRYGEVWMGKW-RGEKVAVKVFFTT-------EEASWFR 78
Query: 809 E--VLALTEIRHRNIIKFHGFCSNAQHS----FIVSEYLDRGSLTTILKDDAAAKEFGWN 862
E + +RH NI+ F S +++++Y + GSL LK
Sbjct: 79 ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS----TTLDAK 134
Query: 863 QRMNVIKGVANALSYLH-----HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + + L +LH P I H D+ SKN+L+ ++D G+A
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194
Query: 918 HSSNW----TAFAGTFGYAAPEI------AHMMRATEKYDVHSFGV----LALEVIKGNH 963
++ GT Y PE+ + ++ D++SFG+ +A + G
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGI 254
Query: 964 PRDY------VSTNFSSFSNMITEINQNLDHRLPTPSR----DVMDKLMSIMEVAILCLV 1013
+Y + + S+ +M + R P+R + + ++ +M C
Sbjct: 255 VEEYQLPYHDLVPSDPSYEDMREIVCIK-KLRPSFPNRWSSDECLRQMGKLMTE---CWA 310
Query: 1014 ESPEARPTMKKVCNLL 1029
+P +R T +V L
Sbjct: 311 HNPASRLTALRVKKTL 326
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 7e-43
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 23/274 (8%)
Query: 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
G++ IG G G+VYK + + AVK N + F NEV L + RH N
Sbjct: 28 VGQR--IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVN 81
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
I+ F G+ + Q + IV+++ + SL L +F + +++ + A + YLH
Sbjct: 82 ILLFMGYSTAPQLA-IVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHA 138
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSNWTAFAGTFGYAAPEIAH 938
I+H D+ S N+ L ++ + DFG+A + S + +G+ + APE+
Sbjct: 139 ---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 939 M---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
M + + DV++FG++ E++ G P + N M+ +L L
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI-NNRDQIIEMVG--RGSLSPDLSKVRS 252
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ ++ +M CL + + RP+ ++ +
Sbjct: 253 NCPKRMKRLMA---ECLKKKRDERPSFPRILAEI 283
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 164 bits (416), Expect = 8e-43
Identities = 97/482 (20%), Positives = 170/482 (35%), Gaps = 35/482 (7%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
N +P L L+ NS+ + L+ L +L LS N++R S+ F
Sbjct: 38 YSNRNLTHVPK--DLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFH 94
Query: 241 L-ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS--FSNLSSLTL 297
+ +L L + N L I + SL LDLS N +P+ F NL+ LT
Sbjct: 95 VFLFNQDLEYLDVSHNRL-QNISC--CPMASLRHLDLSFNDF-DVLPVCKEFGNLTKLTF 150
Query: 298 MSLFNNSL-SGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGL 356
+ L + P + L L + G S+ + L+L +
Sbjct: 151 LGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN-TTVLHLVFHPNSLF 209
Query: 357 VPNEIGYLKSLSKLELCRNHLSGVIPHSIGN----------LTKLVLVNMCENHLFGLIP 406
+ +L L+L L+ + L + L ++ +
Sbjct: 210 SVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKL 269
Query: 407 KSFRNLTSLERLRFNQNNLFGKVYEAFGDH-----PNLTFLDLSQNNLYGEISFNWRNFP 461
F +E L + ++ + +L + + F
Sbjct: 270 FQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFA 329
Query: 462 KLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQL 521
++ S+++ S L+ + N + L L LIL N L
Sbjct: 330 EMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGL 389
Query: 522 S--GGVPLEFGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTEFE 578
V L +++ L+ LD+S N L+S + LNLS+N + F
Sbjct: 390 KNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV---FR 446
Query: 579 KL-IHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIA 637
L + LDL +N + IP + ++++L+ELN++ N L + G F+ + SL I +
Sbjct: 447 CLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLH 505
Query: 638 YN 639
N
Sbjct: 506 DN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 1e-40
Identities = 86/492 (17%), Positives = 171/492 (34%), Gaps = 47/492 (9%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLI 175
+P + + +AL L N +S + +I L+ LR+L N + S+ + +
Sbjct: 46 VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDL 102
Query: 176 NVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP--NVMGNLNSLSILDLSQNQL 233
L + HN I +++L +L L+ N +P GNL L+ L LS +
Sbjct: 103 EYLDVSHNRLQN-ISC--CPMASLRHLDLSFNDF-DVLPVCKEFGNLTKLTFLGLSAAKF 158
Query: 234 RGSIPFSLANLSNLGI--LYLYKNSLFGFIPSVIGNLKSLF-ELDLSENQLFGSIPLSFS 290
R + +L L L + G + + L N LF
Sbjct: 159 R-QLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQ--VNM 215
Query: 291 NLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYD 350
++++L + L N L+ + G + + +L+ +
Sbjct: 216 SVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNV------------TLQHIETTW 263
Query: 351 NGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLV-----NMCENHLFGLI 405
L + + + + L + ++ I ++ L ++
Sbjct: 264 KCSVKLF--QFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSK 321
Query: 406 PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGT 465
+ + + ++ + TFL+ +QN + +L T
Sbjct: 322 EALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQT 381
Query: 466 FNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLF----SLNKLILNLNQL 521
N + + + + L+ + +++ S+ L L+ N L
Sbjct: 382 LILQRNGL-KNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNML 440
Query: 522 SGGVPLEFGSLTE-LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEK 579
+G V F L ++ LDL N++ SIPK + +L L LN+++NQ +P F++
Sbjct: 441 TGSV---FRCLPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKS-VPDGVFDR 495
Query: 580 LIHLSELDLSHN 591
L L + L N
Sbjct: 496 LTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 151 bits (382), Expect = 2e-38
Identities = 93/442 (21%), Positives = 153/442 (34%), Gaps = 29/442 (6%)
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
S++D S L +P L L L +NS+ I L L L LS N+
Sbjct: 31 ELESMVDYSNRNLT-HVPKDL--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNR 87
Query: 281 LFGSIPLS-FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI-G 338
+ S+ F L + + +N L +I + +L L L N D + G
Sbjct: 88 I-RSLDFHVFLFNQDLEYLDVSHNRLQ-NISC--CPMASLRHLDLSFNDFDVLPVCKEFG 143
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLK-SLSKLELCRNHLSGVIPHSI--GNLTKLVLVN 395
NL+ L L L F L + +L S L+L H+ G S+ N T L LV
Sbjct: 144 NLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVF 203
Query: 396 MCENHLFGLIPKSFRNLTSLE----RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451
+ + S L L+ +L P L + L
Sbjct: 204 HPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263
Query: 452 EISFNWRNF---PKLGTFNASMNNIYGSIPPEIGDSSK-----LQVLDLSSNHIVGKIPV 503
+ S F + N I I E S+ L + + + +
Sbjct: 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEA 323
Query: 504 QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLN 563
+ +N +L+++ + S + +L+ + N + S+ + L +L L
Sbjct: 324 LYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLI 383
Query: 564 LSNNQFNH--KIPTEFEKLIHLSELDLSHNFLQGEIPPQICN-MESLEELNLSHNNLFDL 620
L N + K+ + + L LD+S N L + C ES+ LNLS N L
Sbjct: 384 LQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443
Query: 621 IPGCFEEMRSLSRIDIAYNELQ 642
+ C + +D+ N +
Sbjct: 444 VFRCLPP--KVKVLDLHNNRIM 463
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 4e-30
Identities = 87/452 (19%), Positives = 151/452 (33%), Gaps = 45/452 (9%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV-IPQEIGHLTCLRMLY 155
F L YL++S N L NI ++ LR LDL N + + +E G+LT L L
Sbjct: 96 FLFNQDLEYLDVSHNRL-QNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLG 152
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN 215
L + L L +L + + N L+L +
Sbjct: 153 LSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQ 212
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
V ++N+L L LS +L + N L + + ++++ ++
Sbjct: 213 VNMSVNALGHLQLSNIKL------NDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCS 266
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
+ Q F P+ + N+ +LT+ + ++ L++L +
Sbjct: 267 VKLFQFFWPRPVEYLNIYNLTITERIDREEFTY---SETALKSLMIEHVKNQVFLFSKEA 323
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
+ + L + + S + L +N + + L +L +
Sbjct: 324 LYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLI 383
Query: 396 MCENHLFGLIPKSFRNLTSLERLRFNQNNL----FGKVYEAFGDHPNLTFLDLSQNNLYG 451
+ N L K ++ L +L ++ L+LS N L G
Sbjct: 384 LQRNGLKNF-FKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTG 442
Query: 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL 511
+ F L K++VLDL +N I IP L +L
Sbjct: 443 SV------FRCL--------------------PPKVKVLDLHNNRI-MSIPKDVTHLQAL 475
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543
+L + NQL F LT LQY+ L N
Sbjct: 476 QELNVASNQLKSVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 7e-29
Identities = 68/366 (18%), Positives = 124/366 (33%), Gaps = 27/366 (7%)
Query: 82 SLSSLGLNGT-FQDFSFSSFPHL----MYLNLSCNVLYGNIPPQIS--NLSKLRALDLGN 134
L+ LGL+ F+ HL + L+L + G + N + L + N
Sbjct: 147 KLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPN 206
Query: 135 NQLSGVIPQEIGHLTCLRMLYFDVNHLHG----SIPLEIGKLSLINVLTLCHNNFSGRIP 190
+ S + + L L++ +N + + E+ + + +TL H + +
Sbjct: 207 SLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCS 266
Query: 191 PSLGNL---SNLAYLYLNNNSLFGSIPNVMGN-----LNSLSILDLSQNQLRGSIPFSLA 242
L + YL + N ++ I L SL I + S +
Sbjct: 267 VKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYS 326
Query: 243 NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFN 302
+ + I L + + S L+ ++N S+ S L L + L
Sbjct: 327 VFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQR 386
Query: 303 NSLSGSIPPTQGNLEALSELGLYINQLD----GVIPPSIGNLSSLRTLYLYDNGFYGLVP 358
N L + + +S L L+ + S+ L L N G V
Sbjct: 387 NGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445
Query: 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418
+ + L+L N + IP + +L L +N+ N L + F LTSL+ +
Sbjct: 446 RCL--PPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYI 502
Query: 419 RFNQNN 424
+ N
Sbjct: 503 WLHDNP 508
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 98.4 bits (245), Expect = 2e-21
Identities = 56/277 (20%), Positives = 97/277 (35%), Gaps = 18/277 (6%)
Query: 91 TFQDFSFSSFPHLMYLNLSCNVLYGNIPP-----QISNLSKLRALDLGNNQLSGVIPQEI 145
F LN++ + Q + L++ N ++ I +E
Sbjct: 237 RLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREE 296
Query: 146 G-----HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200
L L + + S + +N+ L ++ + S+
Sbjct: 297 FTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT 356
Query: 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260
+L N S+ L L L L +N L+ + N+ L SL
Sbjct: 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSL 415
Query: 261 IPSVIGNL----KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNL 316
+S+ L+LS N L GS+ + ++ L NN + SIP +L
Sbjct: 416 NSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHL 472
Query: 317 EALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGF 353
+AL EL + NQL V L+SL+ ++L+DN +
Sbjct: 473 QALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 163 bits (413), Expect = 5e-42
Identities = 73/373 (19%), Positives = 120/373 (32%), Gaps = 51/373 (13%)
Query: 124 LSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183
+ L++G + L+ +P + + L N+L S+P +L L + N
Sbjct: 39 NNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPALPPELR---TLEVSGN 91
Query: 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLAN 243
+ +P L L+ L L L + NQL S+P
Sbjct: 92 QLT-SLPVLPPGLLELSIFSNPLTHLPALPSG-------LCKLWIFGNQLT-SLPVLPPG 142
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L L + N L +P++ L L NQL S+P+ S L L+ + +N
Sbjct: 143 LQE---LSVSDNQL-ASLPALPSELCK---LWAYNNQL-TSLPMLPSGLQELS---VSDN 191
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
L+ S+P L L + L P L+ L + N L P
Sbjct: 192 QLA-SLPTLPSELYKLWAYNNRLTSL----PALPSG---LKELIVSGNRLTSL-PVLPS- 241
Query: 364 LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
L +L + N L+ +P L L + N L L P+S +L+S + N
Sbjct: 242 --ELKELMVSGNRLTS-LPMLPSGLLSLSVYR---NQLTRL-PESLIHLSSETTVNLEGN 294
Query: 424 NLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGS-IPPEIG 482
L +T + I F+ A +P G
Sbjct: 295 PL---SERTLQALREITSAPGYSGPI---IRFDMAGASAPRETRALHLAAADWLVPAREG 348
Query: 483 DSSKLQVLDLSSN 495
+ + +
Sbjct: 349 EPAPADRWHMFGQ 361
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 5e-38
Identities = 75/406 (18%), Positives = 138/406 (33%), Gaps = 95/406 (23%)
Query: 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279
N ++L++ ++ L ++P L +++ L + N+L +P++ L++L ++S N
Sbjct: 39 NNGNAVLNVGESGLT-TLPDCL--PAHITTLVIPDNNL-TSLPALPPELRTL---EVSGN 91
Query: 280 QLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339
QL S+P+ L L++ S L L +L ++ NQL +P
Sbjct: 92 QL-TSLPVLPPGLLELSIFSNPLTHLPAL-------PSGLCKLWIFGNQL-TSLPVLPPG 142
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN 399
L + L + DN L P L KL N L+ +P L +L ++ +N
Sbjct: 143 L---QELSVSDNQLASL-PALPS---ELCKLWAYNNQLT-SLPMLPSGLQEL---SVSDN 191
Query: 400 HLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRN 459
L L P L L NN + L L +S N L
Sbjct: 192 QLASL-PTLPSELYKLWAY----NNRLTSLPALPS---GLKELIVSGNRL---------- 233
Query: 460 FPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLN 519
S+P +L+ L +S N + +P+
Sbjct: 234 ---------------TSLPVLPS---ELKELMVSGNRLT-SLPM---------------- 258
Query: 520 QLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEK 579
+ L L + N+L+ +P+S+ +LS +NL N + + +
Sbjct: 259 -----------LPSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSERTLQALRE 306
Query: 580 LIHLSELD---LSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIP 622
+ + + P + + L + P
Sbjct: 307 ITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAP 352
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 149 bits (377), Expect = 1e-37
Identities = 85/353 (24%), Positives = 132/353 (37%), Gaps = 69/353 (19%)
Query: 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFD 157
H+ L + N L ++P LR L++ NQL+ +P L L +
Sbjct: 58 CLPAHITTLVIPDNNL-TSLPALPPE---LRTLEVSGNQLT-SLPVLPPGLLELSIFSNP 112
Query: 158 VNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVM 217
+ HL P+L S L L++ N L S+P +
Sbjct: 113 LTHL-----------------------------PAL--PSGLCKLWIFGNQL-TSLPVLP 140
Query: 218 GNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLS 277
L L +S NQL S+P + L L+ Y N L +P + L+ EL +S
Sbjct: 141 PGLQE---LSVSDNQLA-SLPALPSELCK---LWAYNNQL-TSLPMLPSGLQ---ELSVS 189
Query: 278 ENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI 337
+NQL S+P S L L +NN L+ S+P L+ EL + N+L +P
Sbjct: 190 DNQL-ASLPTLPSELYKLW---AYNNRLT-SLPALPSGLK---ELIVSGNRL-TSLPVLP 240
Query: 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMC 397
L+ L + N L P L L + RN L+ +P S+ +L+ VN+
Sbjct: 241 SE---LKELMVSGNRLTSL-PMLPS---GLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292
Query: 398 ENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY 450
N L ++ R +TS + + A P T +
Sbjct: 293 GNPLSERTLQALREITSAP----GYSGPIIRFDMAGASAPRETRALHLAAADW 341
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 5e-14
Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 32/200 (16%)
Query: 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKL-----------------RALDLGNNQLSGV 140
L L++S N L ++P S L KL + L + N+L+
Sbjct: 178 MLPSGLQELSVSDNQL-ASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS- 235
Query: 141 IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200
+P L L N L S+P+ L L++ N + R+P SL +LS+
Sbjct: 236 LPVLPSELK---ELMVSGNRL-TSLPMLPSGLL---SLSVYRNQLT-RLPESLIHLSSET 287
Query: 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260
+ L N L + + S + + A+ + +
Sbjct: 288 TVNLEGNPLSERTLQALREITS---APGYSGPII-RFDMAGASAPRETRALHLAAADW-L 342
Query: 261 IPSVIGNLKSLFELDLSENQ 280
+P+ G + +
Sbjct: 343 VPAREGEPAPADRWHMFGQE 362
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 9e-42
Identities = 57/361 (15%), Positives = 114/361 (31%), Gaps = 45/361 (12%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL 271
+I + N N I ++ + L+ ++ + N+ L L N L + + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 272 FELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDG 331
L+LS N L L +LS+L + L NN + + ++ L N +
Sbjct: 61 ELLNLSSNVL--YETLDLESLSTLRTLDLNNNYVQ-ELLV----GPSIETLHAANNNI-S 112
Query: 332 VIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV-IPHSIGNLTK 390
+ S + +YL +N L + G + L+L N + V +
Sbjct: 113 RVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 391 LVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY 450
L +N+ N ++ + + L+ L + N L + F +T++ L N L
Sbjct: 171 LEHLNLQYNFIYDVKGQVV--FAKLKTLDLSSNKL-AFMGPEFQSAAGVTWISLRNNKL- 226
Query: 451 GEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFS 510
I + S L+ DL N ++ +
Sbjct: 227 ------------------------VLIEKALRFSQNLEHFDLRGNGFHC-GTLRDFFSKN 261
Query: 511 LNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
+ + + + + L +P + L ++ +
Sbjct: 262 QRVQTVAKQTVK-KLTGQNEEECTVPTLGHYGAYCCEDLPAPFA----DRLIALGHHHHH 316
Query: 571 H 571
H
Sbjct: 317 H 317
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-41
Identities = 51/327 (15%), Positives = 112/327 (34%), Gaps = 16/327 (4%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156
+ ++ + L + + ++ LDL N LS + ++ T L +L
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV 216
N L+ ++ LS + L L +N L ++ L+ NN++ +
Sbjct: 66 SSNVLY-ETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNI-SRVS-- 115
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF-IPSVIGNLKSLFELD 275
+ L+ N++ S + L L N + + + +L L+
Sbjct: 116 CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
L N ++ + + L + L +N L+ + P + ++ + L N+L +I
Sbjct: 176 LQYNFIY-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEK 231
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
++ +L L NGF+ + K+ + + + + + T L +
Sbjct: 232 ALRFSQNLEHFDLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGH 290
Query: 396 MCENHLFGLIPKSFRNLTSLERLRFNQ 422
L L +L +
Sbjct: 291 YGAYCCEDLPAPFADRLIALGHHHHHH 317
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 1e-40
Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 15/263 (5%)
Query: 381 IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440
I N + + + ++ L + ++ +++ L + N L L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 441 FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGK 500
L+LS N LY + + L T + + N + E+ ++ L ++N+I +
Sbjct: 62 LLNLSSNVLYETLDL--ESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNI-SR 113
Query: 501 IPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS-SIPKSMGNLSKL 559
+ + + L N+++ L+ G + +QYLDL N++ + + + + L
Sbjct: 114 VS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171
Query: 560 HYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFD 619
+LNL N + + + L LDLS N L + P+ + + ++L +N L
Sbjct: 172 EHLNLQYNFI-YDVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVL 228
Query: 620 LIPGCFEEMRSLSRIDIAYNELQ 642
I ++L D+ N
Sbjct: 229 -IEKALRFSQNLEHFDLRGNGFH 250
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 6e-39
Identities = 57/336 (16%), Positives = 112/336 (33%), Gaps = 23/336 (6%)
Query: 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL 223
+I + + + ++ + + N+ L L+ N L + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 224 SILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFG 283
+L+LS N L ++ +LS L L L N + + S+ L + N +
Sbjct: 61 ELLNLSSNVLYETLDLE--SLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNI-S 112
Query: 284 SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS-IGNLSS 342
+ S + L NN ++ +G + L L +N++D V + +
Sbjct: 113 RVS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLF 402
L L L N Y + ++ L L+L N L+ + + + +++ N L
Sbjct: 171 LEHLNLQYNFIYDV-KGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKL- 226
Query: 403 GLIPKSFRNLTSLERLRFNQNNL-FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFP 461
LI K+ R +LE N G + + F + + + + P
Sbjct: 227 VLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286
Query: 462 KLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI 497
L P +++ L +H
Sbjct: 287 TL----GHYGAYCCEDLPA---PFADRLIALGHHHH 315
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 2e-14
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 548 SIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESL 607
+I + N ++ ++++ + + + ++ ELDLS N L + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 608 EELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
E LNLS N L++ + E + +L +D+ N +Q
Sbjct: 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ 93
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 8e-08
Identities = 11/74 (14%), Positives = 28/74 (37%)
Query: 573 IPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLS 632
I + ++ + L+ + + +++EL+LS N L + L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 633 RIDIAYNELQGPIP 646
++++ N L +
Sbjct: 62 LLNLSSNVLYETLD 75
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 2e-39
Identities = 71/404 (17%), Positives = 136/404 (33%), Gaps = 44/404 (10%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
N S S L+ L L + +S+ I L L +L +
Sbjct: 19 NFASEVAAAFEMQAT---DTISEEQLATLTSLDCHNSSITDMTG--IEKLTGLTKLICTS 73
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
N + L S ++LT ++ +N L+ ++ L L+ L N+L + +
Sbjct: 74 NNITT---LDLSQNTNLTYLACDSNKLT-NLDV--TPLTKLTYLNCDTNKLTKL---DVS 124
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398
L L N + ++ + L++L+ N + + T+L ++
Sbjct: 125 QNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSF 179
Query: 399 NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWR 458
N + L L RL + NN+ + LTFLD S N L +
Sbjct: 180 NKITEL---DVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKL---TEIDVT 230
Query: 459 NFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNL 518
+L F+ S+N + + + SKL L ++ +I + + +
Sbjct: 231 PLTQLTYFDCSVNPL-TELD--VSTLSKLTTLHCIQTDLL-EIDL----THNTQLIYFQA 282
Query: 519 NQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578
L+ T+L LD A ++ + KL YL L+N + ++
Sbjct: 283 EGCRKIKELDVTHNTQLYLLDCQAAGITEL---DLSQNPKLVYLYLNNTELT-ELD--VS 336
Query: 579 KLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIP 622
L L + +Q + + + +L + +
Sbjct: 337 HNTKLKSLSCVNAHIQ-DFSS-VGKIPALNNNFEAEGQTITMPK 378
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 6e-35
Identities = 76/480 (15%), Positives = 150/480 (31%), Gaps = 86/480 (17%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
S L L+ + + ++ I L+ L L +N ++ + ++ T L L
Sbjct: 37 SEEQLATLTSLDCHNSSI-TDMTG-IEKLTGLTKLICTSNNITTL---DLSQNTNLTYLA 91
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN 215
D N L ++ + L+ L YL + N L +
Sbjct: 92 CDSNKLT-NLD--------------------------VTPLTKLTYLNCDTNKL-TKLD- 122
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ L+ L+ ++N L I S + + L L + N + + L LD
Sbjct: 123 -VSQNPLLTYLNCARNTLT-EIDVS--HNTQLTELDCHLNKKITKLD--VTPQTQLTTLD 176
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
S N++ L S L ++ N+++ + L+ L N+L +
Sbjct: 177 CSFNKI---TELDVSQNKLLNRLNCDTNNIT-KLDL--NQNIQLTFLDCSSNKLTEI--- 227
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVN 395
+ L+ L N L ++ L L+ L + L + + + T+L+
Sbjct: 228 DVTPLTQLTYFDCSVNPLTEL---DVSTLSKLTTLHCIQTDLLEI---DLTHNTQLIYFQ 281
Query: 396 MCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISF 455
+ + T L L + +P L +L L+ L
Sbjct: 282 AEGCRK--IKELDVTHNTQLYLLDCQAAGI---TELDLSQNPKLVYLYLNNTEL---TEL 333
Query: 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI 515
+ + KL + + +I +G L + + ++ K
Sbjct: 334 DVSHNTKLKSLSCVNAHI--QDFSSVGKIPALNNNFEAEG-----------QTITMPKET 380
Query: 516 LNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
L N L+ V + LD N + +I G + ++ + P
Sbjct: 381 LTNNSLTIAVSPD--------LLDQFGNPM--NIEPGDGGVYDQATNTITWENLSTDNPA 430
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 1e-34
Identities = 77/501 (15%), Positives = 150/501 (29%), Gaps = 119/501 (23%)
Query: 122 SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181
N + A +
Sbjct: 18 DNFASEVAAAFEMQATDTI----------------------------------------- 36
Query: 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSL 241
S L+ L L +N+S+ + + L L+ L + N + ++ S
Sbjct: 37 ----------SEEQLATLTSLDCHNSSI-TDMTGI-EKLTGLTKLICTSNNIT-TLDLS- 82
Query: 242 ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301
+NL L N L + L L L+ N+L L S LT ++
Sbjct: 83 -QNTNLTYLACDSNKLTNLD---VTPLTKLTYLNCDTNKL---TKLDVSQNPLLTYLNCA 135
Query: 302 NNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEI 361
N+L+ I + L+EL ++N+ + + + L TL N L ++
Sbjct: 136 RNTLT-EIDV--SHNTQLTELDCHLNKK--ITKLDVTPQTQLTTLDCSFNKITEL---DV 187
Query: 362 GYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
K L++L N+++ + + +L ++ N LT ++
Sbjct: 188 SQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSN-----------KLTEID----- 228
Query: 422 QNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI 481
LT+ D S N L + KL T + ++ I +
Sbjct: 229 -----------VTPLTQLTYFDCSVNPL---TELDVSTLSKLTTLHCIQTDLL-EID--L 271
Query: 482 GDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLS 541
+++L + ++ L L ++ L+ +L YL L+
Sbjct: 272 THNTQLIYFQAEGCRKIKELD--VTHNTQLYLLDCQAAGIT---ELDLSQNPKLVYLYLN 326
Query: 542 ANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQI 601
+L + + + + +KL L+ N K+ L+ + +P +
Sbjct: 327 NTEL-TELD--VSHNTKLKSLSCVNAHIQ-DFS-SVGKIPALNNNFEAEGQTI-TMPKET 380
Query: 602 CNMESLEELNLSHNNLFDLIP 622
SL +L D
Sbjct: 381 LTNNSL--TIAVSPDLLDQFG 399
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 8e-34
Identities = 71/376 (18%), Positives = 129/376 (34%), Gaps = 42/376 (11%)
Query: 267 NLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYI 326
N S +S L++LT + N+S++ + L L++L
Sbjct: 19 NFASEVAAAFEMQAT---DTISEEQLATLTSLDCHNSSIT-DMTGI-EKLTGLTKLICTS 73
Query: 327 NQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG 386
N + + + ++L L N L ++ L L+ L N L+ + +
Sbjct: 74 NNITTL---DLSQNTNLTYLACDSNKLTNL---DVTPLTKLTYLNCDTNKLTKL---DVS 124
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
L +N N L + + T L L + N K+ LT LD S
Sbjct: 125 QNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179
Query: 447 NNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE 506
N + E+ + L N NNI + + + +L LD SSN + +
Sbjct: 180 NKIT-ELDVS--QNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSNKLTE---IDVT 230
Query: 507 KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566
L L ++N L+ L+ +L++L L L I + + ++L Y
Sbjct: 231 PLTQLTYFDCSVNPLT---ELDVSTLSKLTTLHCIQTDLLE-IDLT--HNTQLIYFQAEG 284
Query: 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFE 626
+ ++ + L LD + E+ + L L L++ L +L
Sbjct: 285 CRKIKEL--DVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLNNTELTEL---DVS 336
Query: 627 EMRSLSRIDIAYNELQ 642
L + +Q
Sbjct: 337 HNTKLKSLSCVNAHIQ 352
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-29
Identities = 61/345 (17%), Positives = 109/345 (31%), Gaps = 37/345 (10%)
Query: 82 SLSSLGLNGT-FQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV 140
L+ L S +L YL N L N+ ++ L+KL L+ N+L+ +
Sbjct: 65 GLTKLICTSNNITTLDLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLTKL 121
Query: 141 IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200
++ L L N L +++ + + L N + + L
Sbjct: 122 ---DVSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKIT--KLDVTPQTQLT 173
Query: 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260
L + N + + + L+ L+ N + + + L L N L
Sbjct: 174 TLDCSFNKI-TELD--VSQNKLLNRLNCDTNNIT-KLDLN--QNIQLTFLDCSSNKL-TE 226
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALS 320
I + L L D S N L L S LS LT + L I T + L
Sbjct: 227 ID--VTPLTQLTYFDCSVNPL---TELDVSTLSKLTTLHCIQTDLL-EIDLT--HNTQLI 278
Query: 321 ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV 380
+ + + + L L G+ ++ L L L L+ +
Sbjct: 279 Y--FQAEGCRKIKELDVTHNTQLYLLDCQAA---GITELDLSQNPKLVYLYLNNTELTEL 333
Query: 381 IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425
+ + TKL ++ H+ S + +L +
Sbjct: 334 ---DVSHNTKLKSLSCVNAHIQDF--SSVGKIPALNNNFEAEGQT 373
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 7e-18
Identities = 42/265 (15%), Positives = 87/265 (32%), Gaps = 23/265 (8%)
Query: 82 SLSSLGLNGT-FQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV 140
L+ L + + L +L+ S N L I ++ L++L D N L+ +
Sbjct: 192 LLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNPLTEL 248
Query: 141 IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200
++ L+ L L+ L +++ + + + + + + L
Sbjct: 249 ---DVSTLSKLTTLHCIQTDLLE---IDLTHNTQLIYFQAEGCRKIKELD--VTHNTQLY 300
Query: 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260
L + + + L L L+ +L + S + + L L + F
Sbjct: 301 LLDCQAAGI-TELD--LSQNPKLVYLYLNNTELT-ELDVS--HNTKLKSLSCVNAHIQDF 354
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG---SIPPTQGNLE 317
S +G + +L +E Q + +N S +S G +I P G +
Sbjct: 355 --SSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVY 412
Query: 318 ALSELGLYINQLDGVIPPSIGNLSS 342
+ + L P +S
Sbjct: 413 DQATNTITWENLSTDNPAVTYTFTS 437
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 5e-36
Identities = 56/267 (20%), Positives = 112/267 (41%), Gaps = 26/267 (9%)
Query: 761 FGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
F + IG+G +VYK + + + A + + L ++ F E L ++H
Sbjct: 30 FDIE--IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS--ERQRFKEEAEMLKGLQHP 85
Query: 820 NIIKFHG----FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
NI++F+ + +V+E + G+L T LK K + + + L
Sbjct: 86 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGL 142
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
+LH PPI+H D+ N+ + + D G+A +S A GT + AP
Sbjct: 143 QFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK--RASFAKAVIGTPEFMAP 199
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ + E DV++FG+ LE+ +P Y + + + + + + +
Sbjct: 200 EMYE-EKYDESVDVYAFGMCMLEMATSEYP--Y--SECQNAAQIYRRVTS--GVKPASFD 252
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPT 1021
+ + ++ I+E C+ ++ + R +
Sbjct: 253 KVAIPEVKEIIE---GCIRQNKDERYS 276
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 8e-36
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 7/248 (2%)
Query: 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF 239
+C +P + +N L L+ N + N +L L IL LS+N +R
Sbjct: 49 ICVRKNLREVPDGI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIG 106
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLM 298
+ L+NL L L+ N L L L EL L N + SIP +F+ + SL +
Sbjct: 107 AFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI-ESIPSYAFNRIPSLRRL 165
Query: 299 SLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV 357
L I L L L L + L + P++ L L L L N +
Sbjct: 166 DLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIR 223
Query: 358 PNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLER 417
P L L KL + ++ + + ++ NL LV +N+ N+L L F L LER
Sbjct: 224 PGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 283
Query: 418 LRFNQNNL 425
+ + N
Sbjct: 284 IHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-33
Identities = 84/282 (29%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 366 SLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNN 424
SK+ R +L +P I N L L N + + SF++L LE L+ ++N+
Sbjct: 44 QFSKVICVRKNLR-EVPDGISTNTRLLNLHE---NQIQIIKVNSFKHLRHLEILQLSRNH 99
Query: 425 LFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI-GD 483
+ AF NL L+L N L +IP
Sbjct: 100 IRTIEIGAFNGLANLNTLELFDNRL-------------------------TTIPNGAFVY 134
Query: 484 SSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLIL-NLNQLSGGVPLEFGSLTELQYLDLS 541
SKL+ L L +N I IP F ++ SL +L L L +LS F L+ L+YL+L+
Sbjct: 135 LSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 193
Query: 542 ANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ- 600
L IP ++ L KL L+LS N + P F+ L+HL +L + + +Q I
Sbjct: 194 MCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNA 250
Query: 601 ICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
N++SL E+NL+HNNL L F + L RI + +N
Sbjct: 251 FDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-30
Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 13/235 (5%)
Query: 79 ISISLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLG 133
IS + L L+ + SF HL L LS N + I + L+ L L+L
Sbjct: 62 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHI-RTIEIGAFNGLANLNTLELF 120
Query: 134 NNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPP- 191
+N+L+ + +L+ L+ L+ N + SIP ++ + L L I
Sbjct: 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEG 179
Query: 192 SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILY 251
+ LSNL YL L +L IPN + L L LDLS N L P S L +L L+
Sbjct: 180 AFEGLSNLRYLNLAMCNL-REIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 237
Query: 252 LYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSL 305
+ ++ + + NL+SL E++L+ N L +P F+ L L + L +N
Sbjct: 238 MIQSQIQVIERNAFDNLQSLVEINLAHNNL-TLLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 6e-30
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 5/239 (2%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P I ++ R L L++N + N +L+ L L+L RNH+ + + L L
Sbjct: 58 VPDGI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLN 115
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
+ + +N L + +F L+ L+ L N + AF P+L LDL +
Sbjct: 116 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY 175
Query: 453 ISFNW-RNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL 511
IS L N +M N+ P + KL LDLS NH+ P F+ L L
Sbjct: 176 ISEGAFEGLSNLRYLNLAMCNL--REIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHL 233
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
KL + +Q+ F +L L ++L+ N L+ L L ++L +N +N
Sbjct: 234 QKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 3e-10
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Query: 69 GIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLR 128
F + + + L L + +F +L YLNL+ L P ++ L KL
Sbjct: 154 YAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL--REIPNLTPLIKLD 210
Query: 129 ALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLE-IGKLSLINVLTLCHNNFSG 187
LDL N LS + P L L+ L+ + + I L + + L HNN +
Sbjct: 211 ELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAHNNLT- 268
Query: 188 RIPPS-LGNLSNLAYLYLNNNSL 209
+P L +L ++L++N
Sbjct: 269 LLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 582 HLSELDLSHNFLQGEIPP-QICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNE 640
+ L+L N +Q I ++ LE L LS N++ + G F + +L+ +++ N
Sbjct: 65 NTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 641 LQGPIPNST 649
L IPN
Sbjct: 124 LTT-IPNGA 131
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 5e-05
Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 82 SLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQ-ISNLSKLRALDLGNNQ 136
L L L+G + SF HL L + + + I NL L ++L +N
Sbjct: 208 KLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI-QVIERNAFDNLQSLVEINLAHNN 266
Query: 137 LSGVIPQEIGHLTCLRMLYFDVNHLH 162
L+ + L L ++ N +
Sbjct: 267 LTLLPHDLFTPLHHLERIHLHHNPWN 292
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 9e-36
Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 18/277 (6%)
Query: 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLA 812
+ +F + IG+G+ VY+A L G+ A+KK +FD M + + + E+
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQ---IFDLMDAKARADCIKEIDL 85
Query: 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMNVIKGV 871
L ++ H N+IK++ IV E D G L+ ++K K +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
+AL ++H ++H DI NV + + + D G+ +F + ++ + GT Y
Sbjct: 146 CSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY 202
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991
+PE H K D+ S G L E+ P N S I + P
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-----CDYPP 257
Query: 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028
PS ++L ++ +C+ PE RP + V ++
Sbjct: 258 LPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDV 291
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 2e-35
Identities = 62/317 (19%), Positives = 111/317 (35%), Gaps = 44/317 (13%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P I L L +N L ++ L+ L L L N +S + + L KL
Sbjct: 48 VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
+ + +NHL + P +L LR + N + F N+ +++ N L
Sbjct: 106 KLYISKNHLVEIPPNLPSSLV---ELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE-- 160
Query: 453 ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLF-SL 511
P D KL L +S + IP + L +L
Sbjct: 161 ---------------------NSGFEPGAFDGLKLNYLRISEAKLT-GIP---KDLPETL 195
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH 571
N+L L+ N++ + ++L L L N++ S+ L L L+L NN+ +
Sbjct: 196 NELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR 255
Query: 572 KIPTEFEKLIHLSELDLSHNFLQGEIPPQI-------CNMESLEELNLSHNNL--FDLIP 622
+P L L + L N + ++ ++L +N + +++ P
Sbjct: 256 -VPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQP 313
Query: 623 GCFEEMRSLSRIDIAYN 639
F + I
Sbjct: 314 ATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-30
Identities = 58/350 (16%), Positives = 110/350 (31%), Gaps = 55/350 (15%)
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
L ++ S L+ ++P ++ + +L L N + L+ L+ L L N++
Sbjct: 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI 90
Query: 282 FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLS 341
+FS L L + + N L IPP +L EL ++ N++ V L
Sbjct: 91 SKIHEKAFSPLRKLQKLYISKNHLV-EIPP--NLPSSLVELRIHDNRIRKVPKGVFSGLR 147
Query: 342 SLRTLYLYDNGFYGL-VPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
++ + + N L+ L + L+G+ L +L L + N
Sbjct: 148 NMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDH---NK 204
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
+ + + + L RL N + + P L L L N L
Sbjct: 205 IQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS---------- 254
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
+P + D LQV+ L +N+I F +
Sbjct: 255 ---------------RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPV------------ 287
Query: 521 LSGGVPLEFGSLTELQYLDLSANKLS-SSIPKSM-GNLSKLHYLNLSNNQ 568
+ L N + + + ++ + N +
Sbjct: 288 ------GFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 4e-30
Identities = 67/289 (23%), Positives = 110/289 (38%), Gaps = 24/289 (8%)
Query: 100 FPHLMYLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDV 158
P L+L N + + L L AL L NN++S + + L L+ LY
Sbjct: 53 SPDTTLLDLQNNDI-SELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111
Query: 159 NHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGSI--PN 215
NHL IP + S + L + N ++P L N+ + + N L S P
Sbjct: 112 NHLV-EIPPNL--PSSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPG 167
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
L L+ L +S+ +L IP L L L+L N + + L+ L
Sbjct: 168 AFDGLK-LNYLRISEAKLT-GIPKDL--PETLNELHLDHNKIQAIELEDLLRYSKLYRLG 223
Query: 276 LSENQLFGSIP-LSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIP 334
L NQ+ I S S L +L + L NN LS +P +L+ L + L+ N + V
Sbjct: 224 LGHNQI-RMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGV 281
Query: 335 ------PSIGNLSSLRTLYLYDN--GFYGLVPNEIGYLKSLSKLELCRN 375
+ + L++N ++ + P + ++
Sbjct: 282 NDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 6e-29
Identities = 69/283 (24%), Positives = 110/283 (38%), Gaps = 45/283 (15%)
Query: 366 SLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNN 424
L ++ L +P I + T L L N N + L F+ L L L N
Sbjct: 34 HLRVVQCSDLGLK-AVPKEISPDTTLLDLQN---NDISELRKDDFKGLQHLYALVLVNNK 89
Query: 425 LFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS 484
+ +AF L L +S+N+L IPP +
Sbjct: 90 ISKIHEKAFSPLRKLQKLYISKNHLV-------------------------EIPPNL--P 122
Query: 485 SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFGSLT--ELQYLDLS 541
S L L + N I K+P F L ++N + + N L E G+ +L YL +S
Sbjct: 123 SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLEN-SGFEPGAFDGLKLNYLRIS 180
Query: 542 ANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHNFLQGEIPPQ 600
KL+ IPK + L+ L+L +N+ I E + L L L HN ++ I
Sbjct: 181 EAKLTG-IPKDL--PETLNELHLDHNKI-QAIELEDLLRYSKLYRLGLGHNQIR-MIENG 235
Query: 601 IC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
+ +L EL+L +N L +P +++ L + + N +
Sbjct: 236 SLSFLPTLRELHLDNNKL-SRVPAGLPDLKLLQVVYLHTNNIT 277
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 9e-29
Identities = 56/327 (17%), Positives = 112/327 (34%), Gaps = 33/327 (10%)
Query: 198 NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257
+L + ++ L ++P + ++LDL N + L +L L L N +
Sbjct: 34 HLRVVQCSDLGL-KAVPKEISP--DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI 90
Query: 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ-GNL 316
L+ L +L +S+N L P S+L L + +N + +P L
Sbjct: 91 SKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL---RIHDNRIR-KVPKGVFSGL 146
Query: 317 EALSELGLYINQL-DGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN 375
++ + + N L + P + L L + + G+ ++L++L L N
Sbjct: 147 RNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPK---DLPETLNELHLDHN 203
Query: 376 HLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGD 435
+ + + +KL + + N + + S L +L L + N L +V D
Sbjct: 204 KIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL-SRVPAGLPD 262
Query: 436 HPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495
L + L NN+ +F +G + + L +N
Sbjct: 263 LKLLQVVYLHTNNIT---KVGVNDFCPVGFGV---------------KRAYYNGISLFNN 304
Query: 496 HIVGKI--PVQFEKLFSLNKLILNLNQ 520
+ P F + + +
Sbjct: 305 PVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 1e-28
Identities = 60/290 (20%), Positives = 106/290 (36%), Gaps = 28/290 (9%)
Query: 79 ISISLSSLGLNGTF----QDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLG 133
IS + L L + F HL L L N + I + S L KL+ L +
Sbjct: 52 ISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI-SKIHEKAFSPLRKLQKLYIS 110
Query: 134 NNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNF-SGRIPP 191
N L IP + + L L N + +P + L +N + + N + P
Sbjct: 111 KNHLV-EIPPNL--PSSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEP 166
Query: 192 SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP-FSLANLSNLGIL 250
+ L YL ++ L IP +L+ L L N+++ +I L S L L
Sbjct: 167 GAFDGLKLNYLRISEAKL-TGIPK--DLPETLNELHLDHNKIQ-AIELEDLLRYSKLYRL 222
Query: 251 YLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIP 310
L N + + L +L EL L N+L +P +L L ++ L N+++ +
Sbjct: 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKL-SRVPAGLPDLKLLQVVYLHTNNIT-KVG 280
Query: 311 PTQ-------GNLEALSELGLYINQLDGV-IPPSI-GNLSSLRTLYLYDN 351
+ + L+ N + + P+ ++ + +
Sbjct: 281 VNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-16
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592
+ LDL N +S L L+ L L NN+ + F L L +L +S N
Sbjct: 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113
Query: 593 LQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFK 652
L EIPP + SL EL + N + + G F +R+++ I++ N L+ AF
Sbjct: 114 LV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD 170
Query: 653 D 653
Sbjct: 171 G 171
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 4e-35
Identities = 63/310 (20%), Positives = 118/310 (38%), Gaps = 24/310 (7%)
Query: 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL 401
LR + D G VP ++ + L+L N ++ + NL L + + N +
Sbjct: 32 HLRVVQCSDLGL-EKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 88
Query: 402 FGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFP 461
+ P +F L LERL ++N L + L L + +N + +
Sbjct: 89 SKISPGAFAPLVKLERLYLSKNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLN 145
Query: 462 KLGTFNASMNNIYGS-IPPEI-GDSSKLQVLDLSSNHIVGKIPVQFEKLF-SLNKLILNL 518
++ N + S I KL + ++ +I IP + L SL +L L+
Sbjct: 146 QMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIP---QGLPPSLTELHLDG 201
Query: 519 NQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578
N+++ L L L LS N +S+ S+ N L L+L+NN+ K+P
Sbjct: 202 NKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLA 260
Query: 579 KLIHLSELDLSHNFLQGEIPPQ-------ICNMESLEELNLSHNNL--FDLIPGCFEEMR 629
++ + L +N + I S ++L N + +++ P F +
Sbjct: 261 DHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVY 319
Query: 630 SLSRIDIAYN 639
+ + +
Sbjct: 320 VRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 4e-33
Identities = 59/288 (20%), Positives = 110/288 (38%), Gaps = 21/288 (7%)
Query: 100 FPHLMYLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDV 158
P L+L N + I NL L L L NN++S + P L L LY
Sbjct: 51 PPDTALLDLQNNKI-TEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109
Query: 159 NHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGSI--PN 215
N L +P ++ + L + N + ++ L+ + + L N L S
Sbjct: 110 NQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENG 165
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ LS + ++ + +IP L +L L+L N + + + L +L +L
Sbjct: 166 AFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLG 222
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV--- 332
LS N + S +N L + L NN L +P + + + + L+ N + +
Sbjct: 223 LSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSN 281
Query: 333 ---IPPSIGNLSSLRTLYLYDN--GFYGLVPNEIGYLKSLSKLELCRN 375
P +S + L+ N ++ + P+ + + ++L
Sbjct: 282 DFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 4e-32
Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 29/291 (9%)
Query: 79 ISISLSSLGLNGTF----QDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLG 133
+ + L L +D F + +L L L N + I P + L KL L L
Sbjct: 50 LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI-SKISPGAFAPLVKLERLYLS 108
Query: 134 NNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNF-SGRIPP 191
NQL +P+++ L+ L N + + + L+ + V+ L N S I
Sbjct: 109 KNQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIEN 164
Query: 192 -SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGI 249
+ + L+Y+ + + ++ +IP G SL+ L L N++ + SL L+NL
Sbjct: 165 GAFQGMKKLSYIRIADTNI-TTIPQ--GLPPSLTELHLDGNKIT-KVDAASLKGLNNLAK 220
Query: 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSI 309
L L NS+ + N L EL L+ N+L +P ++ + ++ L NN++S +I
Sbjct: 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHNNNIS-AI 278
Query: 310 PPTQ-------GNLEALSELGLYINQLDGV-IPPSI-GNLSSLRTLYLYDN 351
+ S + L+ N + I PS + + L +
Sbjct: 279 GSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 4e-31
Identities = 65/376 (17%), Positives = 119/376 (31%), Gaps = 84/376 (22%)
Query: 198 NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257
+L + ++ L +P ++LDL N++ NL NL L L N +
Sbjct: 32 HLRVVQCSDLGL-EKVPK--DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 88
Query: 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSLSGSIPPTQGNL 316
P L L L LS+NQL +P L L + N ++
Sbjct: 89 SKISPGAFAPLVKLERLYLSKNQL-KELPEKMPKTLQEL---RVHENEIT---------- 134
Query: 317 EALSELGLYINQLDGVIPPSI-GNLSSLRTLYLYDN--GFYGLVPNEIGYLKSLSKLELC 373
+ S+ L+ + + L N G+ +K LS + +
Sbjct: 135 ---------------KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179
Query: 374 RNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAF 433
+++ + +LT+L L N + + S + L +L +L + N++ +
Sbjct: 180 DTNITTIPQGLPPSLTELHLDG---NKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSL 236
Query: 434 GDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLS 493
+ P+L L L+ N L +P + D +QV+ L
Sbjct: 237 ANTPHLRELHLNNNKLV-------------------------KVPGGLADHKYIQVVYLH 271
Query: 494 SNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS-SSIPKS 552
+N+I + P + L +N + I S
Sbjct: 272 NNNIS------------------AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPS 313
Query: 553 M-GNLSKLHYLNLSNN 567
+ + L N
Sbjct: 314 TFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-30
Identities = 62/303 (20%), Positives = 110/303 (36%), Gaps = 45/303 (14%)
Query: 366 SLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNN 424
L ++ L +P + + L L N N + + F+NL +L L N
Sbjct: 32 HLRVVQCSDLGLE-KVPKDLPPDTALLDLQN---NKITEIKDGDFKNLKNLHTLILINNK 87
Query: 425 LFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS 484
+ AF L L LS+N L +P ++
Sbjct: 88 ISKISPGAFAPLVKLERLYLSKNQLK-------------------------ELPEKM--P 120
Query: 485 SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGV--PLEFGSLTELQYLDLS 541
LQ L + N I K+ F L + + L N L F + +L Y+ ++
Sbjct: 121 KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179
Query: 542 ANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHNFLQGEIPPQ 600
+++ IP+ G L L+L N+ K+ + L +L++L LS N + +
Sbjct: 180 DTNITT-IPQ--GLPPSLTELHLDGNKI-TKVDAASLKGLNNLAKLGLSFNSIS-AVDNG 234
Query: 601 IC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLMEGN 659
N L EL+L++N L +PG + + + + + N + I ++ G
Sbjct: 235 SLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHNNNISA-IGSNDFCPPGYNTKK 292
Query: 660 KGL 662
Sbjct: 293 ASY 295
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 6e-35
Identities = 63/248 (25%), Positives = 100/248 (40%), Gaps = 7/248 (2%)
Query: 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF 239
+C +P + SN YL L N++ + +L+ L +L L +N +R
Sbjct: 60 VCTRRGLSEVPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVG 117
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLM 298
+ L++L L L+ N L L L EL L N + SIP +F+ + SL +
Sbjct: 118 AFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPI-ESIPSYAFNRVPSLMRL 176
Query: 299 SLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV 357
L I L L L L + + + P++ L L L + N F +
Sbjct: 177 DLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPEIR 234
Query: 358 PNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLER 417
P L SL KL + + +S + ++ L LV +N+ N+L L F L L
Sbjct: 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVE 294
Query: 418 LRFNQNNL 425
L + N
Sbjct: 295 LHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 3e-33
Identities = 77/282 (27%), Positives = 115/282 (40%), Gaps = 38/282 (13%)
Query: 366 SLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNN 424
SK+ R LS +P I N L L+ N++ + +FR+L LE L+ +N+
Sbjct: 55 QFSKVVCTRRGLS-EVPQGIPSNTRYLNLME---NNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 425 LFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI-GD 483
+ AF +L L+L N L IP
Sbjct: 111 IRQIEVGAFNGLASLNTLELFDNWL-------------------------TVIPSGAFEY 145
Query: 484 SSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLIL-NLNQLSGGVPLEFGSLTELQYLDLS 541
SKL+ L L +N I IP F ++ SL +L L L +L F L L+YL+L
Sbjct: 146 LSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 204
Query: 542 ANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ- 600
+ +P ++ L L L +S N F P F L L +L + ++ + I
Sbjct: 205 MCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS-LIERNA 261
Query: 601 ICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
+ SL ELNL+HNNL L F +R L + + +N
Sbjct: 262 FDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 1e-32
Identities = 68/280 (24%), Positives = 101/280 (36%), Gaps = 34/280 (12%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
+ + G VP I + L L N++ + + +L L ++ + N
Sbjct: 54 NQFSKVVCTRRGLSE-VPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
+ + +F L SL L N L AF L L L N +
Sbjct: 111 IRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPI----------- 159
Query: 461 PKLGTFNASMNNIYGSIPPEI-GDSSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNL 518
SIP L LDL + I FE LF+L L L +
Sbjct: 160 --------------ESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGM 205
Query: 519 NQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578
+ +P L L+ L++S N P S LS L L + N+Q + F+
Sbjct: 206 CNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFD 263
Query: 579 KLIHLSELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNL 617
L L EL+L+HN L +P + + L EL+L HN
Sbjct: 264 GLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 2e-30
Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 13/235 (5%)
Query: 79 ISISLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLG 133
I + L L Q +F HL L L N + I + L+ L L+L
Sbjct: 73 IPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI-RQIEVGAFNGLASLNTLELF 131
Query: 134 NNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPP- 191
+N L+ + +L+ LR L+ N + SIP ++ + L L I
Sbjct: 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEG 190
Query: 192 SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILY 251
+ L NL YL L ++ +PN + L L L++S N P S LS+L L+
Sbjct: 191 AFEGLFNLKYLNLGMCNIK-DMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLW 248
Query: 252 LYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSL 305
+ + + + L SL EL+L+ N L S+P F+ L L + L +N
Sbjct: 249 VMNSQVSLIERNAFDGLASLVELNLAHNNL-SSLPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 5e-30
Identities = 66/239 (27%), Positives = 98/239 (41%), Gaps = 5/239 (2%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P I S+ R L L +N + + +L L L+L RN + + + L L
Sbjct: 69 VPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLN 126
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
+ + +N L + +F L+ L L N + AF P+L LDL +
Sbjct: 127 TLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEY 186
Query: 453 ISFN-WRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL 511
IS + L N M NI P + L+ L++S NH P F L SL
Sbjct: 187 ISEGAFEGLFNLKYLNLGMCNI--KDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSL 244
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
KL + +Q+S F L L L+L+ N LSS L L L+L +N +N
Sbjct: 245 KKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 5e-10
Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Query: 69 GIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLR 128
F + ++ + L L + +F +L YLNL + P ++ L L
Sbjct: 165 YAFNRVP-SLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI--KDMPNLTPLVGLE 221
Query: 129 ALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLE-IGKLSLINVLTLCHNNFSG 187
L++ N + P L+ L+ L+ + + I L+ + L L HNN S
Sbjct: 222 ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLS- 279
Query: 188 RIPPS-LGNLSNLAYLYLNNNSL 209
+P L L L+L++N
Sbjct: 280 SLPHDLFTPLRYLVELHLHHNPW 302
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 3e-33
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 21/278 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D+ Y IG G G K G I K+ + + + ++ ++EV L E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--EKQMLVSEVNLLREL 62
Query: 817 RHRNIIKFHG--FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMNVIKGVAN 873
+H NI++++ +IV EY + G L +++ ++ + V+ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 874 ALSYLH--HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
AL H D ++H D+ NV LD + + DFG+A+ LN +S F GT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991
+PE + M EK D+ S G L E+ P + + + + I E R+P
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP--FTAFSQKELAGKIREGKFR---RIP 237
Query: 992 TP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028
S ++ + + L RP+++++
Sbjct: 238 YRYSDELNEIITR-------MLNLKDYHRPSVEEILEN 268
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 4e-33
Identities = 61/281 (21%), Positives = 101/281 (35%), Gaps = 15/281 (5%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF- 239
+ IP L + L L+NN + + + +L L L+ N + +I
Sbjct: 38 GSSGSLNSIPSGL--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEED 94
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLM 298
S ++L +L L L N L S L SL L+L N S FS+L+ L ++
Sbjct: 95 SFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQIL 154
Query: 299 SLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV 357
+ N I L L EL + + L P S+ ++ ++ L L+ L+
Sbjct: 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLL 214
Query: 358 PNEIGYLKSLSKLELCRNHLSGVIPHSI--------GNLTKLVLVNMCENHLFGLIPKSF 409
+ S+ LEL L + V + + LF + K
Sbjct: 215 EIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQ-VMKLL 273
Query: 410 RNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY 450
++ L L F++N L F +L + L N
Sbjct: 274 NQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 8e-32
Identities = 55/283 (19%), Positives = 104/283 (36%), Gaps = 33/283 (11%)
Query: 366 SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425
++ L+L N ++ + + L + + N + + SF +L SLE L + N L
Sbjct: 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112
Query: 426 FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSS 485
F +LTFL+L N + + F+ +
Sbjct: 113 SNLSSSWFKPLSSLTFLNLLGNPY--------KTLGETSLFS---------------HLT 149
Query: 486 KLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANK 544
KLQ+L + + KI + F L L +L ++ + L P S+ + +L L +
Sbjct: 150 KLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209
Query: 545 LSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE--------FEKLIHLSELDLSHNFLQGE 596
+ + S + L L + + +E K + ++ L +
Sbjct: 210 HILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-Q 268
Query: 597 IPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639
+ + + L EL S N L + G F+ + SL +I + N
Sbjct: 269 VMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 8e-30
Identities = 61/286 (21%), Positives = 105/286 (36%), Gaps = 23/286 (8%)
Query: 80 SISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLS 138
SS LN + L+LS N + I L+AL L +N ++
Sbjct: 35 ICKGSSGSLNSIPSGL----TEAVKSLDLSNNRI-TYISNSDLQRCVNLQALVLTSNGIN 89
Query: 139 GVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPS--LGN 195
+ L L L N+L ++ LS + L L N + + + +
Sbjct: 90 TIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSH 147
Query: 196 LSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYK 254
L+ L L + N F I L L L++ + L+ P SL ++ N+ L L+
Sbjct: 148 LTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHM 207
Query: 255 NSLFGFIPSVIGNLKSLFELDLSENQL----FGSIP----LSFSNLSSLTLMSLFNNSLS 306
+ + S+ L+L + L F + S + + + + SL
Sbjct: 208 KQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF 267
Query: 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSI-GNLSSLRTLYLYDN 351
+ + L EL NQL +P I L+SL+ ++L+ N
Sbjct: 268 -QVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 6e-29
Identities = 51/295 (17%), Positives = 112/295 (37%), Gaps = 37/295 (12%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
IP + ++++L L +N + +++ +L L L N ++ + S +L L
Sbjct: 46 IPSGL--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFG-KVYEAFGDHPNLTFLDLSQNNLYG 451
+++ N+L L F+ L+SL L N F L L + + +
Sbjct: 104 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT 163
Query: 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL 511
+I F L + L+ L++ ++ + P + + ++
Sbjct: 164 KIQRKD--FAGL---------------------TFLEELEIDASDLQSYEPKSLKSIQNV 200
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS----SSIPK----SMGNLSKLHYLN 563
+ LIL++ Q + + + ++ L+L L S + S+ +
Sbjct: 201 SHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVK 260
Query: 564 LSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNL 617
+++ + ++ L EL+ S N L+ +P I + SL+++ L N
Sbjct: 261 ITDESLFQ-VMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 8e-26
Identities = 49/281 (17%), Positives = 96/281 (34%), Gaps = 42/281 (14%)
Query: 381 IPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439
IP + + L L N N + + + +L+ L N + ++F +L
Sbjct: 46 IPSGLTEAVKSLDLSN---NRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL 102
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHIV 498
LDLS N L ++ S L L+L N
Sbjct: 103 EHLDLSYNYL-------------------------SNLSSSWFKPLSSLTFLNLLGNPYK 137
Query: 499 GKIPV-QFEKLFSLNKLILNLNQLSGGVPLE-FGSLTELQYLDLSANKLSSSIPKSMGNL 556
F L L L + + + F LT L+ L++ A+ L S PKS+ ++
Sbjct: 138 TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSI 197
Query: 557 SKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQIC--------NMESLE 608
+ +L L Q + + + L+L L ++ +
Sbjct: 198 QNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFR 257
Query: 609 ELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNST 649
+ ++ +LF + ++ L ++ + N+L+ +P+
Sbjct: 258 NVKITDESLFQ-VMKLLNQISGLLELEFSRNQLKS-VPDGI 296
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 5e-33
Identities = 59/276 (21%), Positives = 110/276 (39%), Gaps = 24/276 (8%)
Query: 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
++++ + IG+G G + G + +K+ N + + +++E EV L
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK--EREESRREVAVLA 78
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
++H NI+++ +IV +Y + G L + F +Q ++ + A
Sbjct: 79 NMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA-QKGVLFQEDQILDWFVQICLA 137
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
L ++H I+H DI S+N+ L + + DFGIA+ LN A GT Y +P
Sbjct: 138 LKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF--SSFSNMITEINQNLDHRLPT 992
EI K D+ + G + E+ H F S N++ +I +
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHA-------FEAGSMKNLVLKIISGSFPPVSL 247
Query: 993 P-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
S D+ + +P RP++ +
Sbjct: 248 HYSYDLRSLVSQ-------LFKRNPRDRPSVNSILE 276
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 3e-32
Identities = 63/249 (25%), Positives = 96/249 (38%), Gaps = 29/249 (11%)
Query: 397 CENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN 456
C + +P +S RL N L + F LT L LS N L
Sbjct: 14 CNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLS-FKGCC 70
Query: 457 WRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLIL 516
++ + L+ LDLS N ++ + F L L L
Sbjct: 71 SQSDFGT---------------------TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDF 108
Query: 517 NLNQLSGGVPLE-FGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
+ L F SL L YLD+S + LS L L ++ N F
Sbjct: 109 QHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 168
Query: 576 E-FEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSLSR 633
+ F +L +L+ LDLS L+ ++ P ++ SL+ LN+SHNN F L ++ + SL
Sbjct: 169 DIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227
Query: 634 IDIAYNELQ 642
+D + N +
Sbjct: 228 LDYSLNHIM 236
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 4e-32
Identities = 57/251 (22%), Positives = 91/251 (36%), Gaps = 10/251 (3%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQL--RGSIP 238
C++ +P + S+ L L +N L V L L+ L LS N L +G
Sbjct: 14 CNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS 71
Query: 239 FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTL 297
S ++L L L N + + S L+ L LD + L S F +L +L
Sbjct: 72 QSDFGTTSLKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 130
Query: 298 MSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSI-GNLSSLRTLYLYDNGFYG 355
+ + + L +L L + N P I L +L L L
Sbjct: 131 LDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 189
Query: 356 LVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNL-TS 414
L P L SL L + N+ + L L +++ NH+ + ++ +S
Sbjct: 190 LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 249
Query: 415 LERLRFNQNNL 425
L L QN+
Sbjct: 250 LAFLNLTQNDF 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-31
Identities = 65/245 (26%), Positives = 95/245 (38%), Gaps = 12/245 (4%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS--GVIPHSIGNLTK 390
+P I SS L L N L L L+KL L N LS G S T
Sbjct: 22 VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTS 79
Query: 391 LVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE-AFGDHPNLTFLDLSQNNL 449
L +++ N + + +F L LE L F +NL F NL +LD+S +
Sbjct: 80 LKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 138
Query: 450 YGEISFNW-RNFPKLGTFNASMNNIYGSIPPEI-GDSSKLQVLDLSSNHIVGKIPVQ-FE 506
L + N+ + P+I + L LDLS + ++ F
Sbjct: 139 -RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFN 196
Query: 507 KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNL-SKLHYLNLS 565
L SL L ++ N + L LQ LD S N + +S + + + S L +LNL+
Sbjct: 197 SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT 256
Query: 566 NNQFN 570
N F
Sbjct: 257 QNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 6e-31
Identities = 71/281 (25%), Positives = 101/281 (35%), Gaps = 33/281 (11%)
Query: 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL 401
S + G VP I S ++LEL N L + LT+L +++ N L
Sbjct: 8 SGTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGL 64
Query: 402 --FGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRN 459
G +S TSL+ L + N + + F L LD +NL +
Sbjct: 65 SFKGCCSQSDFGTTSLKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNL--------KQ 115
Query: 460 FPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLN 519
+ F L LD+S H F L SL L + N
Sbjct: 116 MSEFSVFL---------------SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160
Query: 520 QLSGGVPLE-FGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578
+ F L L +LDLS +L P + +LS L LN+S+N F ++
Sbjct: 161 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK 220
Query: 579 KLIHLSELDLSHNFLQGEIPPQICN--MESLEELNLSHNNL 617
L L LD S N + Q SL LNL+ N+
Sbjct: 221 CLNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDF 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 6e-30
Identities = 64/241 (26%), Positives = 100/241 (41%), Gaps = 8/241 (3%)
Query: 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSL--FGSIPNVMGNLN 221
S+P I S L L N L+ L L L++N L G
Sbjct: 21 SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT 78
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP-SVIGNLKSLFELDLSENQ 280
SL LDLS N + ++ + L L L ++L SV +L++L LD+S
Sbjct: 79 SLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 137
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGN 339
+ F+ LSSL ++ + NS + P L L+ L L QL+ + P + +
Sbjct: 138 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 197
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL-TKLVLVNMCE 398
LSSL+ L + N F+ L L SL L+ NH+ + + + L +N+ +
Sbjct: 198 LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQ 257
Query: 399 N 399
N
Sbjct: 258 N 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-29
Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 10/238 (4%)
Query: 100 FPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLS--GVIPQEIGHLTCLRMLYF 156
L L N L ++P + L++L L L +N LS G Q T L+ L
Sbjct: 27 PSSATRLELESNKL-QSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85
Query: 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGSIPN 215
N + ++ L + L H+N S+ +L NL YL +++ +
Sbjct: 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 144
Query: 216 VMGNLNSLSILDLSQNQLRGSI-PFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
+ L+SL +L ++ N + + P L NL L L + L P+ +L SL L
Sbjct: 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204
Query: 275 DLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPT--QGNLEALSELGLYINQLD 330
++S N F + L+SL ++ N + + Q +L+ L L N
Sbjct: 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 46/194 (23%), Positives = 74/194 (38%), Gaps = 8/194 (4%)
Query: 93 QDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEI-GHLTCL 151
S L YL+LS N + + L +L LD ++ L + + L L
Sbjct: 70 CSQSDFGTTSLKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 128
Query: 152 RMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSL 209
L H I LS + VL + N+F P L NL +L L+ L
Sbjct: 129 IYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187
Query: 210 FGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNL 268
+ +L+SL +L++S N F L++L +L N + + +
Sbjct: 188 -EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246
Query: 269 -KSLFELDLSENQL 281
SL L+L++N
Sbjct: 247 PSSLAFLNLTQNDF 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 8e-19
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 510 SLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS--SSIPKSMGNLSKLHYLNLSNN 567
S +L L N+L F LT+L L LS+N LS +S + L YL+LS N
Sbjct: 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN 88
Query: 568 QFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ--ICNMESLEELNLSHNNLFDLIPGCF 625
+ + F L L LD H+ L+ ++ ++ +L L++SH + G F
Sbjct: 89 GVIT-MSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146
Query: 626 EEMRSLSRIDIAYNELQGPIPNST 649
+ SL + +A N Q
Sbjct: 147 NGLSSLEVLKMAGNSFQENFLPDI 170
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 14/149 (9%)
Query: 68 FGIFCNLVGRVISISLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-S 122
F +F +L +L L ++ + F+ L L ++ N N P I +
Sbjct: 119 FSVFLSLR------NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 172
Query: 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182
L L LDL QL + P L+ L++L N+ L+ + VL
Sbjct: 173 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSL 232
Query: 183 NNFSGRIPPSL--GNLSNLAYLYLNNNSL 209
N+ S+LA+L L N
Sbjct: 233 NHIM-TSKKQELQHFPSSLAFLNLTQNDF 260
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 5e-32
Identities = 69/411 (16%), Positives = 119/411 (28%), Gaps = 63/411 (15%)
Query: 119 PQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178
+ +++ L L LS +P + + +L N L S+P L L
Sbjct: 53 LKECLINQFSELQLNRLNLS-SLPDNLP--PQITVLEITQNALI-SLPELPASLE---YL 105
Query: 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP 238
C N S +P +L + L ++NN L +P + L ++ NQL +P
Sbjct: 106 DACDNRLS-TLPELPASLKH---LDVDNNQL-TMLPELPALLEY---INADNNQLT-MLP 156
Query: 239 FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLM 298
++L +L + N L F+P + +L+ LD+S N L S+P
Sbjct: 157 ---ELPTSLEVLSVRNNQL-TFLPELPESLE---ALDVSTNLL-ESLPAVPVRNHHS--- 205
Query: 299 SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP 358
E N++ IP +I +L T+ L DN +
Sbjct: 206 -----------------EETEIFFRCRENRI-THIPENILSLDPTCTIILEDNPLSSRIR 247
Query: 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418
+ + R + S N L + +
Sbjct: 248 ESLSQQTAQPDYHGPRIYFSMSDGQQ--NTLHRPLADAVTAWFPENKQSDVSQIWHAFEH 305
Query: 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNA---SMNNIYG 475
+ N + D + + + KL +
Sbjct: 306 EEHANTFS-AFLDRLSDTVSARNTSGFREQV-------AAWLEKLSASAELRQQSFAVAA 357
Query: 476 SIPPEIGDSSKLQVLDLSSNHIV-----GKIPVQFEKLFSLNKLILNLNQL 521
D L +L +V G L SL + + L L
Sbjct: 358 DATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEIL 408
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-31
Identities = 57/334 (17%), Positives = 110/334 (32%), Gaps = 59/334 (17%)
Query: 284 SIPLSFSNLSSLTLMSLFNN--SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLS 341
SI L +N SL+ S +N E + G N+ ++ + ++
Sbjct: 2 SIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECL--IN 59
Query: 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL 401
L L L P+ + ++ LE+ +N L +P +L L + C+N L
Sbjct: 60 QFSELQLNRLNLSSL-PDNLP--PQITVLEITQNALI-SLPELPASLEYL---DACDNRL 112
Query: 402 FGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHP-NLTFLDLSQNNLYGEISFNWRNF 460
L P+ +L L + N L + P L +++ N L
Sbjct: 113 STL-PELPASLK---HLDVDNNQL-----TMLPELPALLEYINADNNQL----------- 152
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
+P L+VL + +N + +P E SL L ++ N
Sbjct: 153 --------------TMLPELPT---SLEVLSVRNNQL-TFLP---ELPESLEALDVSTNL 191
Query: 521 LSGGVPLEFGSLTELQ----YLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE 576
L +P + + N+++ IP+++ +L + L +N + +I
Sbjct: 192 LES-LPAVPVRNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRES 249
Query: 577 FEKLIHLSELDLSHNFLQGEIPPQICNMESLEEL 610
+ + + Q L +
Sbjct: 250 LSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADA 283
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 79.2 bits (195), Expect = 3e-15
Identities = 43/272 (15%), Positives = 79/272 (29%), Gaps = 35/272 (12%)
Query: 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCL------ 151
L +L++ N L +P + L ++ NNQL+ ++P+ L L
Sbjct: 117 ELPASLKHLDVDNNQL-TMLPELPALL---EYINADNNQLT-MLPELPTSLEVLSVRNNQ 171
Query: 152 -----------RMLYFDVNHLHGSIPLEIGKL----SLINVLTLCHNNFSGRIPPSLGNL 196
L N L S+P + N + IP ++ +L
Sbjct: 172 LTFLPELPESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSL 229
Query: 197 SNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256
+ L +N L I + + + S N + +
Sbjct: 230 DPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQ--NTLHRPLADAVTAW 287
Query: 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNL 316
S + + FE + N + S+ S S F ++ + L
Sbjct: 288 FPENKQSDVSQIWHAFEHEEHANTFS-AFLDRLSDTVSARNTSGFREQVAAWLE----KL 342
Query: 317 EALSELGLYINQLDGVIPPSIGNLSSLRTLYL 348
A +EL + S + +L L
Sbjct: 343 SASAELRQQSFAVAADATESCEDRVALTWNNL 374
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 9e-32
Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 29/270 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIF-AVKKFNSQLLFDEMADQ-DEFLNEVLALTEIRHRNIIKF 824
IG+G G V+ L + AVK D +FL E L + H NI++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRE----TLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G C+ Q +IV E + G T L+ + + ++ A + YL
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK--- 232
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGY--AAPEIAHMMRA 942
+H D++++N L+ ++ +SDFG+++ + APE + R
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 943 TEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDH--RLPTPSRDVMD 999
+ + DV SFG+L E G P + + SN + + ++ RLP P D
Sbjct: 293 SSESDVWSFGILLWETFSLGASP-------YPNLSN--QQTREFVEKGGRLPCP-ELCPD 342
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ +ME C P RP+ + L
Sbjct: 343 AVFRLME---QCWAYEPGQRPSFSTIYQEL 369
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 1e-31
Identities = 63/274 (22%), Positives = 106/274 (38%), Gaps = 32/274 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
D+ G++ +GKG G VY +L + + A+K ++ + E+ +
Sbjct: 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIK----EIPERDSRYSQPLHEEIALHKHL 76
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
+H+NI+++ G S I E + GSL+ +L+ + K + L
Sbjct: 77 KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLK 136
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
YLH + IVH DI NVL+++ + + SDFG +K L + F GT Y AP
Sbjct: 137 YLHDNQ---IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAP 192
Query: 935 EIAHMMR--ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT---EINQNLDH- 988
EI + D+ S G +E+ G P F ++ H
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPP-------FYELGEPQAAMFKVGMFKVHP 245
Query: 989 RLPTP-SRDVMDKLMSIMEVAILCLVESPEARPT 1021
+P S + ++ C P+ R
Sbjct: 246 EIPESMSAEAKAFIL-------KCFEPDPDKRAC 272
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 4e-31
Identities = 57/276 (20%), Positives = 101/276 (36%), Gaps = 41/276 (14%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+ + +G+G G V++ + +G AVK ++ + + E++A +
Sbjct: 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK----KVRLEVFRVE-----ELVACAGL 107
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
I+ +G I E L+ GSL ++K E ++ + + L
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLE 164
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTA-----FAGTFG 930
YLH I+HGD+ + NVLL S+ A + DFG A L P + GT
Sbjct: 165 YLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 221
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--ITEINQNLDH 988
+ APE+ K D+ S + L ++ G HP ++ + +I
Sbjct: 222 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP-------WTQYFRGPLCLKIASEPPP 274
Query: 989 RLPTP---SRDVMDKLMSIMEVAILCLVESPEARPT 1021
P + + L + P R +
Sbjct: 275 IREIPPSCAPLTAQAIQ-------EGLRKEPVHRAS 303
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 5e-31
Identities = 57/285 (20%), Positives = 103/285 (36%), Gaps = 38/285 (13%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G V E L G +A+K+ E D++E E H NI++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREEAQREADMHRLFNHPNILRLV 92
Query: 826 GFCSNAQHS----FIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMNVIKGVANALSYLHH 880
+C + + +++ + RG+L ++ +Q + ++ G+ L +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN---------WTAFAGTFGY 931
H D+ N+LL E + + D G H W A T Y
Sbjct: 153 ---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 932 AAPEIAHMMR---ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
APE+ + E+ DV S G + ++ G P D V S + +
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV-----QNQL 264
Query: 989 RLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
+P R + +L++ M + P RP + + + L
Sbjct: 265 SIPQSPRHSSALWQLLNSM------MTVDPHQRPHIPLLLSQLEA 303
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 6e-31
Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 36/286 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DD+ + IG G V A P A+K+ N L DE L E+ A+++
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN---LEKCQTSMDELLKEIQAMSQCH 71
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN------VIKGV 871
H NI+ ++ ++V + L GS+ I+K AK + ++ +++ V
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH-IVAKGEHKSGVLDESTIATILREV 130
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA-----FA 926
L YLH + +H D+ + N+LL + ++DFG++ FL F
Sbjct: 131 LEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 927 GTFGYAAPEIAHMMRAT---EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--ITE 981
GT + APE+ M + K D+ SFG+ A+E+ G P + + M +
Sbjct: 188 GTPCWMAPEV--MEQVRGYDFKADIWSFGITAIELATGAAP-------YHKYPPMKVLML 238
Query: 982 INQNLDHRLPTPSRDVMDKLM---SIMEVAILCLVESPEARPTMKK 1024
QN L T +D S ++ LCL + PE RPT +
Sbjct: 239 TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAE 284
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-30
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 34/273 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+ F + IGKG G V+K + + + A+K + L + + ++ E+ L++
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCD 78
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ K++G +I+ EYL GS +L+ Q +++ + L Y
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDY 134
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH + +H DI + NVLL E ++DFG+A L F GT + APE+
Sbjct: 135 LHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 191
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--ITEINQN----LDHRLP 991
K D+ S G+ A+E+ +G P S M + I +N L+
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPP-------HSELHPMKVLFLIPKNNPPTLEGNYS 244
Query: 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
P ++ ++ CL + P RPT K+
Sbjct: 245 KPLKEFVEA----------CLNKEPSFRPTAKE 267
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-30
Identities = 54/293 (18%), Positives = 113/293 (38%), Gaps = 44/293 (15%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+ DF C+G+G G V++A+ +A+K+ L + +++ + EV AL ++
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR---LPNRELAREKVMREVKALAKL 60
Query: 817 RHRNIIKFHGFC------------SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
H I+++ S + +I + + +L + +E +
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-------- 916
+++ +A A+ +LH ++H D+ N+ + V DFG+ ++
Sbjct: 121 LHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 917 ----PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF 972
P + T GT Y +PE H + K D+ S G++ E++ +P F
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YP-------F 227
Query: 973 SSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S+ + + + + P +++ L SP RP +
Sbjct: 228 STQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQ---DMLSPSPMERPEAINI 277
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 6e-30
Identities = 53/287 (18%), Positives = 108/287 (37%), Gaps = 48/287 (16%)
Query: 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DF E IG G G V+KA+ G + +K+ + ++ EV AL ++
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY--------NNEKAEREVKALAKLD 62
Query: 818 HRNIIKFHGF----------------CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGW 861
H NI+ ++G S + FI E+ D+G+L ++ ++
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-RRGEKLDK 121
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
+ + + + + Y+H +++ D+ N+ L + + DFG+ L +
Sbjct: 122 VLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLK-NDGK 177
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981
T GT Y +PE ++ D+++ G++ E++ S T+
Sbjct: 178 RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT-------AFETSKFFTD 230
Query: 982 INQN-LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ + + ++ K L + PE RP ++
Sbjct: 231 LRDGIISDIFDKKEKTLLQK----------LLSKKPEDRPNTSEILR 267
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 1e-29
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 39/276 (14%)
Query: 767 IGKGRQGSVYKAELPSG---IIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G G G+V K AVK K + ++ A +DE L E + ++ + I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA----NDPALKDELLAEANVMQQLDNPYI 80
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL--H 879
++ G C +V E + G L L+ + + + ++ V+ + YL
Sbjct: 81 VRMIGICEAESW-MLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES 136
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEI 936
+ VH D++++NVLL ++H A +SDFG++K L + + A + APE
Sbjct: 137 N-----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 937 AHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDH--RLPTP 993
+ + + K DV SFGVL E G P + +E+ L+ R+ P
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKP-------YRGMKG--SEVTAMLEKGERMGCP 242
Query: 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ +M LC E RP V L
Sbjct: 243 -AGCPREMYDLM---NLCWTYDVENRPGFAAVELRL 274
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-29
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 35/271 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G+ G V+ + A+K + + +++F+ E + ++ H +++ +G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKT-----IREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL--HHDCLP 884
C +V+E+++ G L+ L+ F + + V ++YL
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---- 124
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMR 941
++H D++++N L+ VSDFG+ +F+ +T+ GT +A+PE+ R
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 942 ATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNM--ITEINQNLDHRLPTPSRDVM 998
+ K DV SFGVL EV +G P + + SN + +I+ RL P R
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIP-------YENRSNSEVVEDIST--GFRLYKP-RLAS 231
Query: 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ IM C E PE RP ++ L
Sbjct: 232 THVYQIM---NHCWRERPEDRPAFSRLLRQL 259
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-29
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 35/271 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V + AVK M +DEF E + ++ H ++KF+G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE----GSM-SEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL--HHDCLP 884
CS +IV+EY+ G L L+ K +Q + + V +++L H
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQ---- 124
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMR 941
+H D++++N L+D + VSDFG+ +++ + + GT ++APE+ H +
Sbjct: 125 -FIHRDLAARNCLVDRDLCVKVSDFGMTRYV--LDDQYVSSVGTKFPVKWSAPEVFHYFK 181
Query: 942 ATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNM--ITEINQNLDHRLPTPSRDVM 998
+ K DV +FG+L EV G P + ++N + +++Q HRL P
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMP-------YDLYTNSEVVLKVSQ--GHRLYRP-HLAS 231
Query: 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D + IM C E PE RPT +++ + +
Sbjct: 232 DTIYQIM---YSCWHELPEKRPTFQQLLSSI 259
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 5e-29
Identities = 58/240 (24%), Positives = 84/240 (35%), Gaps = 31/240 (12%)
Query: 381 IPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439
+P I ++ L N + + SFR +L L + N L AF L
Sbjct: 26 VPVGIPAASQRIFLHG---NRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499
LDLS N + TF+ +L L L +
Sbjct: 83 EQLDLSDNAQLRSVD--------PATFH---------------GLGRLHTLHLDRCGLQ- 118
Query: 500 KIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSK 558
++ F L +L L L N L F L L +L L N++SS ++ L
Sbjct: 119 ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178
Query: 559 LHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNL 617
L L L N+ H P F L L L L N L +P + + +L+ L L+ N
Sbjct: 179 LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-28
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 3/206 (1%)
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
+ + L N++ S NL IL+L+ N L + L L +LDLS+N
Sbjct: 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92
Query: 282 FGSIPLS-FSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGN 339
S+ + F L L + L L + P L AL L L N L + + +
Sbjct: 93 LRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN 399
L +L L+L+ N + L SL +L L +N ++ V PH+ +L +L+ + + N
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 400 HLFGLIPKSFRNLTSLERLRFNQNNL 425
+L L ++ L +L+ LR N N
Sbjct: 212 NLSALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 5e-28
Identities = 57/245 (23%), Positives = 84/245 (34%), Gaps = 29/245 (11%)
Query: 397 CENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN 456
C +P + +R+ + N + +F NLT L L N L
Sbjct: 18 CPQQGLQAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL------- 68
Query: 457 WRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLI 515
F + L+ LDLS N + + F L L+ L
Sbjct: 69 -ARIDA-AAFT---------------GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111
Query: 516 LNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
L+ L P F L LQYL L N L + + +L L +L L N+ +
Sbjct: 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171
Query: 576 EFEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRI 634
F L L L L N + + P ++ L L L NNL L +R+L +
Sbjct: 172 AFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 230
Query: 635 DIAYN 639
+ N
Sbjct: 231 RLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 35/240 (14%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
+P I + + + L N++S V L +L+
Sbjct: 26 VPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILW--------------------- 62
Query: 177 VLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLR 234
L N + RI + L+ L L L++N+ S+ L L L L + L+
Sbjct: 63 ---LHSNVLA-RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ 118
Query: 235 GSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIP-LSFSNL 292
+ L+ L LYL N+L +L +L L L N++ S+P +F L
Sbjct: 119 -ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-SSVPERAFRGL 176
Query: 293 SSLTLMSLFNNSLSGSIPP-TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
SL + L N ++ + P +L L L L+ N L + ++ L +L+ L L DN
Sbjct: 177 HSLDRLLLHQNRVA-HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 7/170 (4%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
++P I + Q + L N I F +L L L+ N L+ F L L
Sbjct: 25 AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 536 QYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHNFL 593
+ LDLS N S+ + L +LH L+L + F L L L L N L
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNAL 141
Query: 594 QGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
Q +P ++ +L L L N + + F + SL R+ + N +
Sbjct: 142 Q-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 55/235 (23%), Positives = 89/235 (37%), Gaps = 35/235 (14%)
Query: 79 ISISLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLG 133
I + + L+G SF + +L L L NVL I + L+ L LDL
Sbjct: 30 IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL-ARIDAAAFTGLALLEQLDLS 88
Query: 134 NNQLSGVIPQEI-GHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS 192
+N + L L L+ D L + P
Sbjct: 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELG-----------------------PGL 124
Query: 193 LGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILY 251
L+ L YLYL +N+L ++P + +L +L+ L L N++ + L +L L
Sbjct: 125 FRGLAALQYLYLQDNAL-QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183
Query: 252 LYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSL 305
L++N + P +L L L L N L ++P + L +L + L +N
Sbjct: 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNL-SALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 4e-25
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 11/180 (6%)
Query: 469 SMNNIYGSIPPEI-GDSSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVP 526
N I +P L +L L SN + +I F L L +L L+ N V
Sbjct: 40 HGNRI-SHVPAASFRACRNLTILWLHSNVL-ARIDAAAFTGLALLEQLDLSDNAQLRSVD 97
Query: 527 LE-FGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTE-FEKLIHL 583
F L L L L L + + L+ L YL L +N +P + F L +L
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNL 155
Query: 584 SELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
+ L L N + +P + + SL+ L L N + + P F ++ L + + N L
Sbjct: 156 THLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 6e-25
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 29/240 (12%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P I ++ + ++L+ N + ++L+ L L N L+ + + L L
Sbjct: 26 VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 393 LVNMCEN-HLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451
+++ +N L + P +F L L L ++ L F L +L L N L
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL-- 141
Query: 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEI-GDSSKLQVLDLSSNHIVGKIPVQFEKLFS 510
++P + D L L L N I F L S
Sbjct: 142 -----------------------QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178
Query: 511 LNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L++L+L+ N+++ P F L L L L AN LS+ +++ L L YL L++N +
Sbjct: 179 LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 82 SLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQ 136
+L+ L L+G + + +F L L L N + ++ P +L +L L L N
Sbjct: 154 NLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV-AHVHPHAFRDLGRLMTLYLFANN 212
Query: 137 LSGVIPQEIGHLTCLRMLYFDVNHLH 162
LS + + + L L+ L + N
Sbjct: 213 LSALPTEALAPLRALQYLRLNDNPWV 238
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 8e-29
Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 39/280 (13%)
Query: 763 EKYCIGKGRQGSVYKAELPSG---IIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEIR 817
+G G GSV + I A+K K ++ AD +E + E + ++
Sbjct: 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-----KADTEEMMREAQIMHQLD 68
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ I++ G C +V E G L L +E + ++ V+ + Y
Sbjct: 69 NPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKY 125
Query: 878 L--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYA 932
L + VH D++++NVLL + H A +SDFG++K L S +TA + +
Sbjct: 126 LEEKN-----FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDH--R 989
APE + + + + DV S+GV E + G P + E+ ++ R
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKP-------YKKMKG--PEVMAFIEQGKR 231
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ P + +L ++M C + E RP V +
Sbjct: 232 MECP-PECPPELYALM---SDCWIYKWEDRPDFLTVEQRM 267
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 8e-29
Identities = 62/272 (22%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 766 CIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G+ G VY+ + AVK L ++ + +EFL E + EI+H N+++
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKHPNLVQL 281
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH-HDCL 883
G C+ +I++E++ G+L L++ +E + + +++A+ YL +
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNF- 339
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMM 940
+H +++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 340 ---IHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYN 394
Query: 941 RATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDV 997
+ + K DV +FGVL E+ G P + +++ + L+ +R+ P
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMSP-------YPGIDL--SQVYELLEKDYRMERP-EGC 444
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+K+ +M C +P RP+ ++
Sbjct: 445 PEKVYELM---RACWQWNPSDRPSFAEIHQAF 473
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-28
Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 33/271 (12%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G+ G V+ A AVK M + FL E + ++H ++K H
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKP----GSM-SVEAFLAEANVMKTLQHDKLVKLH 249
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLP 884
+ + +I++E++ +GSL LK D + + ++ +A ++++ +
Sbjct: 250 AVVTK-EPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRNY-- 305
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMR 941
+H D+ + N+L+ + ++DFG+A+ + + +TA G + APE +
Sbjct: 306 --IHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGS 361
Query: 942 ATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVM 998
T K DV SFG+L +E++ G P + SN E+ + L+ +R+P P +
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIP-------YPGMSN--PEVIRALERGYRMPRP-ENCP 411
Query: 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++L +IM + C PE RPT + + ++L
Sbjct: 412 EELYNIM---MRCWKNRPEERPTFEYIQSVL 439
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-28
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 35/271 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V + A+K M +DEF+ E + + H +++ +G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE----GSM-SEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL--HHDCLP 884
C+ + FI++EY+ G L L++ F Q + + K V A+ YL
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQ---- 140
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMR 941
+H D++++N L++ + VSDFG+++++ +T+ G+ ++ PE+ +
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSK 197
Query: 942 ATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNM--ITEINQNLDHRLPTPSRDVM 998
+ K D+ +FGVL E+ G P + F+N I Q RL P
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMP-------YERFTNSETAEHIAQ--GLRLYRP-HLAS 247
Query: 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+K+ +IM C E + RPT K + + +
Sbjct: 248 EKVYTIM---YSCWHEKADERPTFKILLSNI 275
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-28
Identities = 68/274 (24%), Positives = 111/274 (40%), Gaps = 31/274 (11%)
Query: 767 IGKGRQGSVYKAEL--PSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G G V + E PSG + AVK +L + D+F+ EV A+ + HRN+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-SQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ +G +V+E GSL L+ F VA + YL
Sbjct: 85 RLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHM 939
+H D++++N+LL + + DFG+ + L + ++ F + APE
Sbjct: 142 F---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 940 MRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD---HRLPTPSR 995
+ D FGV E+ G P + + ++I +D RLP P
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEP-------WIGLNG--SQILHKIDKEGERLPRP-E 248
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D + ++M + C PE RPT + + L
Sbjct: 249 DCPQDIYNVM---VQCWAHKPEDRPTFVALRDFL 279
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-28
Identities = 68/287 (23%), Positives = 112/287 (39%), Gaps = 47/287 (16%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RH 818
F K +G G +G++ + AVK+ + AD+ EV L E H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE--CFSFADR-----EVQLLRESDEH 77
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR--MNVIKGVANALS 876
N+I++ + Q +I E + L++ K+F + +++ + L+
Sbjct: 78 PNVIRYFCTEKDRQFQYIAIELCA-AT----LQEYVEQKDFAHLGLEPITLLQQTTSGLA 132
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHE-----AHVSDFGIAKFLNPHSS---NWTAFAGT 928
+LH IVH D+ N+L+ + A +SDFG+ K L + GT
Sbjct: 133 HLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
Query: 929 FGYAAPEI---AHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEI-- 982
G+ APE+ T D+ S G + VI +G+HP F I
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP-------FGKSLQRQANILL 242
Query: 983 -NQNLDHRLPTPSRDVMDK-LMSIMEVAILCLVESPEARPTMKKVCN 1027
+LD P DV+ + L+ M + P+ RP+ K V
Sbjct: 243 GACSLDCLHPEKHEDVIARELIEKM------IAMDPQKRPSAKHVLK 283
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 3e-28
Identities = 40/218 (18%), Positives = 78/218 (35%), Gaps = 18/218 (8%)
Query: 759 DDFGEKYCIGKGRQ--GSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
+ IGKG + +V A P+G V++ N L E+
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN--LEACSNEMVTFLQGELHVSKL 82
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
H NI+ + ++V+ ++ GS ++ +++GV AL
Sbjct: 83 FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC-THFMDGMNELAIAYILQGVLKAL 141
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-------WTAFAGT 928
Y+HH VH + + ++L+ + + ++S + H
Sbjct: 142 DYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV 198
Query: 929 FGYAAPEIAHMMRA--TEKYDVHSFGVLALEVIKGNHP 964
+ +PE+ K D++S G+ A E+ G+ P
Sbjct: 199 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 64/291 (21%), Positives = 117/291 (40%), Gaps = 50/291 (17%)
Query: 762 GEKY----CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
G Y IG G V++ I+A+K N + ++ D + NE+ L +++
Sbjct: 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS--YRNEIAYLNKLQ 84
Query: 818 HRN--IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ II+ + + Q+ ++V E + L + LK K +R + K + A+
Sbjct: 85 QHSDKIIRLYDYEITDQYIYMVMECGN-IDLNSWLKKK---KSIDPWERKSYWKNMLEAV 140
Query: 876 SYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYA 932
+H H IVH D+ N L+ + + DFGIA + P +++ + GT Y
Sbjct: 141 HTIHQHG----IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 933 APEI-----------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981
PE + + K DV S G + + G P F N I++
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------FQQIINQISK 248
Query: 982 INQ--NLDHRLPTP---SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
++ + +H + P +D+ D L CL P+ R ++ ++
Sbjct: 249 LHAIIDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELLA 292
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 3e-28
Identities = 64/291 (21%), Positives = 116/291 (39%), Gaps = 50/291 (17%)
Query: 762 GEKY----CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
G Y IG G V++ I+A+K N + ++ D + NE+ L +++
Sbjct: 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS--YRNEIAYLNKLQ 65
Query: 818 H--RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
II+ + + Q+ ++V E + L + LK K +R + K + A+
Sbjct: 66 QHSDKIIRLYDYEITDQYIYMVMECGN-IDLNSWLKKK---KSIDPWERKSYWKNMLEAV 121
Query: 876 SYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYA 932
+H H IVH D+ N L+ + + DFGIA + P +++ + GT Y
Sbjct: 122 HTIHQHG----IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 933 APEI-------AHMMRATEKY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981
PE ++ K DV S G + + G P F N I++
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------FQQIINQISK 229
Query: 982 INQ--NLDHRLPTP---SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
++ + +H + P +D+ D L CL P+ R ++ ++
Sbjct: 230 LHAIIDPNHEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELLA 273
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 41/278 (14%)
Query: 767 IGKGRQGSVYKAELPSG----IIFAVKKFNSQLLFDEMA-DQDEFLNEVLALTEIRHRNI 821
IG G G V L + A+K + + +FL+E + + H NI
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKA----GYTERQRRDFLSEASIMGQFDHPNI 112
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL--H 879
I+ G + + + IV+EY++ GSL T L+ +F Q + +++GV + YL
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-----YAAP 934
VH D++++NVL+DS VSDFG+++ L A+ T G + AP
Sbjct: 171 G-----YVHRDLAARNVLVDSNLVCKVSDFGLSRVL--EDDPDAAYTTTGGKIPIRWTAP 223
Query: 935 EIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNM--ITEINQNLDHRLP 991
E + DV SFGV+ EV+ G P + + +N I+ + + +RLP
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERP-------YWNMTNRDVISSVEE--GYRLP 274
Query: 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P L +M + C + RP ++ ++L
Sbjct: 275 AP-MGCPHALHQLM---LDCWHKDRAQRPRFSQIVSVL 308
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 4e-28
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 35/271 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+ IG+G G+VY A ++ +G A+++ N + ++ +NE+L + E +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENK 75
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ NI+ + ++V EYL GSLT ++ Q V + AL +
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEF 131
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH + ++H DI S N+LL + ++DFG + P S + GT + APE+
Sbjct: 132 LHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM-----ITEINQNLDHRLPT 992
K D+ S G++A+E+I+G P + N + I N T
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP----------YLNENPLRALYLIATN-----GT 233
Query: 993 PSRDVMDKLMSIME--VAILCLVESPEARPT 1021
P +KL +I + CL E R +
Sbjct: 234 PELQNPEKLSAIFRDFLN-RCLEMDVEKRGS 263
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 5e-28
Identities = 61/283 (21%), Positives = 113/283 (39%), Gaps = 46/283 (16%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH--RNIIK 823
IG G V++ I+A+K N + ++ D + NE+ L +++ II+
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ--TLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH-HDC 882
+ + Q+ ++V E + L + LK K +R + K + A+ +H H
Sbjct: 121 LYDYEITDQYIYMVMECGN-IDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG- 175
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPEI---- 936
IVH D+ N L+ + + DFGIA + P +++ + G Y PE
Sbjct: 176 ---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 937 -------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ--NLD 987
+ + K DV S G + + G P F N I++++ + +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-------FQQIINQISKLHAIIDPN 284
Query: 988 HRLPTP---SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
H + P +D+ D L CL P+ R ++ ++
Sbjct: 285 HEIEFPDIPEKDLQDVLKC-------CLKRDPKQRISIPELLA 320
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 6e-28
Identities = 56/290 (19%), Positives = 108/290 (37%), Gaps = 62/290 (21%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G ++K +K + + F ++++ H
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK----AHRNYSESFFEAASMMSKLSH 71
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
++++ +G C + +V E++ GSL T LK + ++ V K +A A+ +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFL 129
Query: 879 --HHDCLPPIVHGDISSKNVLLDSEHEAH--------VSDFGIAKFLNPHSS-----NWT 923
+ ++HG++ +KN+LL E + +SD GI+ + P W
Sbjct: 130 EENT-----LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 924 AFAGTFGYAAPE-IAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITE 981
PE I + D SFG E+ G+ P S+ +
Sbjct: 185 ---------PPECIENPKNLNLATDKWSFGTTLWEICSGGDKP-------LSALDS--QR 226
Query: 982 INQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
Q + H+LP P + L++ C+ P+ RP+ + + L
Sbjct: 227 KLQFYEDRHQLPAPKAAELANLIN------NCMDYEPDHRPSFRAIIRDL 270
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 8e-28
Identities = 56/293 (19%), Positives = 102/293 (34%), Gaps = 48/293 (16%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI- 816
+F E IG G GSV+K + G I+A+K+ S+ D+ L EV A +
Sbjct: 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGSVDEQNALREVYAHAVLG 68
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMNVIKGVANAL 875
+H +++++ + H I +EY + GSL + ++ F + +++ V L
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVS-------------------DFGIAKFLN 916
Y+H +VH DI N+ + + + D G
Sbjct: 129 RYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT--- 182
Query: 917 PHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF 975
S+ G + A E+ K D+ + + +
Sbjct: 183 -RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL--------PRN 233
Query: 976 SNMITEINQNLDHRLPTP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ EI Q R+P S++ + L + PE RP+ +
Sbjct: 234 GDQWHEIRQGRLPRIPQVLSQEFTELLKV-------MIHPDPERRPSAMALVK 279
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-27
Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 31/270 (11%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V+ A+K M + FL E + ++RH +++ +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP----GTM-SPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 246 AVVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRA 942
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 943 TEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMD 999
T K DV SFG+L E+ KG P + N E+ ++ +R+P P + +
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVP-------YPGMVN--REVLDQVERGYRMPCP-PECPE 408
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
L +M C + PE RPT + + L
Sbjct: 409 SLHDLM---CQCWRKEPEERPTFEYLQAFL 435
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 1e-27
Identities = 61/289 (21%), Positives = 114/289 (39%), Gaps = 37/289 (12%)
Query: 753 EIIKAID-DFGEKYCIGKGRQGSVYKAELPSG-----IIFAVKKFNSQLLFDEMADQ-DE 805
I+K + + +G G G+VYK I A+K+ E
Sbjct: 10 RILKETEFKKIKV--LGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKE 63
Query: 806 FLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM 865
L+E + + + ++ + G C ++++ + G L +++ G +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLL 120
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925
N +A ++YL L VH D++++NVL+ + ++DFG+AK L + A
Sbjct: 121 NWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 926 AGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEI 982
G + A E T + DV S+GV E++ G+ P + +EI
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-------YDGIPA--SEI 228
Query: 983 NQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ L+ RLP P + IM C + ++RP +++
Sbjct: 229 SSILEKGERLPQPP-ICTIDVYMIM---RKCWMIDADSRPKFRELIIEF 273
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-27
Identities = 73/301 (24%), Positives = 120/301 (39%), Gaps = 45/301 (14%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
DDF + +G G G V+K PSG++ A K + L + A +++ + E+ L E
Sbjct: 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHEC 88
Query: 817 RHRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E V V L
Sbjct: 89 NSPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGL 144
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L S +F GT Y +PE
Sbjct: 145 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTRSYMSPE 200
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP--------RDYVSTNFSSFSNMITEINQNLD 987
+ + D+ S G+ +E+ G +P + + T
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260
Query: 988 HRLPTPSRDVMDKLMSIMEV--AIL----------------------CLVESPEARPTMK 1023
R M+I E+ I+ CL+++P R +K
Sbjct: 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320
Query: 1024 K 1024
+
Sbjct: 321 Q 321
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-27
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 37/278 (13%)
Query: 767 IGKGRQGSVYKAELPSG----IIFAVKKFNSQLLFDEMADQ-DEFLNEVLALTEIRHRNI 821
+G G G V L I A+K Q +FL E + + H NI
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKV----GYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL--H 879
I+ G + ++ IV+EY++ GSL + L+ +F Q + +++G+A+ + YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEI 936
VH D++++N+L++S VSDFG+ + L G + +PE
Sbjct: 167 G-----YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 937 AHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNM--ITEINQNLDHRLPTP 993
+ T DV S+G++ EV+ G P + SN I +++ +RLP P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP-------YWEMSNQDVIKAVDEG--YRLPPP 272
Query: 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
D L +M + C + RP +++ ++L K
Sbjct: 273 -MDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-27
Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 33/271 (12%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G+ G V+ AVK M D FL E + +++H+ +++ +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ----GSM-SPDAFLAEANLMKQLQHQRLVRLY 74
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLP 884
+ + +I++EY++ GSL LK + + N+ +++ +A ++++ +
Sbjct: 75 AVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY-- 130
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMR 941
+H D+ + N+L+ ++DFG+A+ + + +TA G + APE +
Sbjct: 131 --IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 942 ATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVM 998
T K DV SFG+L E++ G P + +N E+ QNL+ +R+ P +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP-------YPGMTN--PEVIQNLERGYRMVRP-DNCP 236
Query: 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++L +M LC E PE RPT + ++L
Sbjct: 237 EELYQLM---RLCWKERPEDRPTFDYLRSVL 264
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-27
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 31/272 (11%)
Query: 767 IGKGRQGSVYKAELPSG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G G GSV + I A+K E AD +E + E + ++ + I++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVR 400
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
G C +V E G L L +E + ++ V+ + YL
Sbjct: 401 LIGVCQAEAL-MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMM 940
VH +++++NVLL + H A +SDFG++K L S +TA + + APE +
Sbjct: 458 ---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 941 RATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDH--RLPTPSRDV 997
+ + + DV S+GV E + G P + E+ ++ R+ P +
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKP-------YKKMKG--PEVMAFIEQGKRMECP-PEC 564
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+L ++M C + E RP V +
Sbjct: 565 PPELYALM---SDCWIYKWEDRPDFLTVEQRM 593
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 3e-27
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 29/268 (10%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
IG+G G V A E SG AVK + + ++ NEV+ + + +
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMD----LRKQQRRELLFNEVVIMRDYQ 100
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H N+++ + + +++ E+L G+LT I+ Q V + V AL+Y
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS----QVRLNEEQIATVCEAVLQALAY 156
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH ++H DI S ++LL + +SDFG ++ + GT + APE+
Sbjct: 157 LHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVI 213
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--ITEINQNLDHRLPTPSR 995
+ D+ S G++ +E++ G P + S S + + + + P P
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPP-------YFSDSPVQAMKRLRDS-----PPPKL 261
Query: 996 DVMDKLMSIME--VAILCLVESPEARPT 1021
K+ ++ + LV P+ R T
Sbjct: 262 KNSHKVSPVLRDFLE-RMLVRDPQERAT 288
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-27
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 35/271 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+ F +G+G GSVYKA +G I A+K+ + +D E + E+ + +
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE------SDLQEIIKEISIMQQCD 82
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+++K++G +IV EY GS++ I++ K ++ +++ L Y
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATILQSTLKGLEY 140
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH +H DI + N+LL++E A ++DFG+A L + GT + APE+
Sbjct: 141 LHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM-----ITEINQNLDHRLPT 992
+ D+ S G+ A+E+ +G P ++++ I I N P
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGKPP----------YADIHPMRAIFMIPTN-----PP 242
Query: 993 PSRDVMDKLMSIME--VAILCLVESPEARPT 1021
P+ + V CLV+SPE R T
Sbjct: 243 PTFRKPELWSDNFTDFVK-QCLVKSPEQRAT 272
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 4e-27
Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 50/283 (17%)
Query: 767 IGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
IG G G VYK L + A+K + + +FL E + + H NI
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT---EKQRVDFLGEAGIMGQFSHHNI 108
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
I+ G S + I++EY++ G+L L++ EF Q + +++G+A + YL +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN------------WTAFAGTF 929
VH D++++N+L++S VSDFG+++ L WT
Sbjct: 167 NY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT------ 217
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNM--ITEINQNL 986
APE + T DV SFG++ EV+ G P + SN + IN
Sbjct: 218 ---APEAISYRKFTSASDVWSFGIVMWEVMTYGERP-------YWELSNHEVMKAINDG- 266
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RLPTP D + +M + C + RP + ++L
Sbjct: 267 -FRLPTP-MDCPSAIYQLM---MQCWQQERARRPKFADIVSIL 304
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 5e-27
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 38/285 (13%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK +F E+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STEEHLRDFEREIEILKSLQHDNI 73
Query: 822 IKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+K+ G C +A ++ EYL GSL L+ + + + + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 131
Query: 880 -HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N+L+++E+ + DFG+ K L + + APE
Sbjct: 132 TKRY----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI-------TEINQNLD- 987
+ + DV SFGV+ E+ F + + L
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247
Query: 988 -HRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RLP P D + +M+ C + RP+ + + +
Sbjct: 248 NGRLPRPDGCPDEIYMIMT------ECWNNNVNQRPSFRDLALRV 286
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 5e-27
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 33/271 (12%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V+ A+K M + FL E + ++RH +++ +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKP----GTM-SPEAFLQEAQVMKKLRHEKLVQLY 328
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH-HDCLP 884
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+ +
Sbjct: 329 AVVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY-- 384
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMR 941
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R
Sbjct: 385 --VHRDLRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGR 440
Query: 942 ATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVM 998
T K DV SFG+L E+ KG P + N E+ ++ +R+P P +
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVP-------YPGMVN--REVLDQVERGYRMPCP-PECP 490
Query: 999 DKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ L +M C + PE RPT + + L
Sbjct: 491 ESLHDLM---CQCWRKEPEERPTFEYLQAFL 518
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 6e-27
Identities = 66/274 (24%), Positives = 109/274 (39%), Gaps = 45/274 (16%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKG G V + G AVK A FL E +T++RH N+++ G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 827 FCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLP 884
+ +IV+EY+ +GSL L+ G + + V A+ YL ++
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNNF-- 138
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN------WTAFAGTFGYAAPEIAH 938
VH D++++NVL+ ++ A VSDFG+ K + WT APE
Sbjct: 139 --VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------APEALR 187
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNM--ITEINQNLDHRLPTPSR 995
+ + K DV SFG+L E+ G P + + + + +++ P
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRVP-------YPRIPLKDVVPRVEK--GYKMDAP-D 237
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ +M C RP+ ++ L
Sbjct: 238 GCPPAVYEVM---KNCWHLDAAMRPSFLQLREQL 268
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 6e-27
Identities = 53/273 (19%), Positives = 87/273 (31%), Gaps = 27/273 (9%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
F +G G G V+K G ++AVK+ S F D+ L EV + ++
Sbjct: 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR--SMSPFRGPKDRARKLAEVGSHEKV 113
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+H ++ ++ +E SL + Q ++ AL
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTELCG-PSLQQHCEAWG--ASLPEAQVWGYLRDTLLAL 170
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
++LH +VH D+ N+ L + DFG+ L + G Y APE
Sbjct: 171 AHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV-QEGDPRYMAPE 226
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP-S 994
+ DV S G+ LEV L S
Sbjct: 227 L-LQGSYGTAADVFSLGLTILEVACNMEL-------PHGGEGWQQLRQGYLPPEFTAGLS 278
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
++ L+ L P+ R T + +
Sbjct: 279 SELRSVLVM-------MLEPDPKLRATAEALLA 304
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 7e-27
Identities = 67/275 (24%), Positives = 109/275 (39%), Gaps = 45/275 (16%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V + G AVK A FL E +T++RH N+++
Sbjct: 200 TIGKGEFGDVMLGDY-RGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 826 GFCSNAQHSF-IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL-HHDCL 883
G + IV+EY+ +GSL L+ G + + V A+ YL ++
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNNF- 310
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN------WTAFAGTFGYAAPEIA 937
VH D++++NVL+ ++ A VSDFG+ K + WT APE
Sbjct: 311 ---VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------APEAL 358
Query: 938 HMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPS 994
+ + K DV SFG+L E+ G P + ++ ++ +++ P
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVP-------YPRIPL--KDVVPRVEKGYKMDAP- 408
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ +M C RPT ++ L
Sbjct: 409 DGCPPAVYDVM---KNCWHLDAATRPTFLQLREQL 440
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 7e-27
Identities = 67/284 (23%), Positives = 112/284 (39%), Gaps = 37/284 (13%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVK QL Q +F E+ L + I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVK----QLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 822 IKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+K+ G +V EYL G L L+ A ++ + + + YL
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 144
Query: 880 -HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
C VH D++++N+L++SE ++DFG+AK L + + APE
Sbjct: 145 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200
Query: 936 IAHMMRATEKYDVHSFGVLALEVI-KGNHP----RDYVSTNFSSFSNM-ITEINQNLD-- 987
+ + DV SFGV+ E+ + +++ ++ + + L+
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260
Query: 988 HRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RLP P + +LM LC SP+ RP+ + L
Sbjct: 261 QRLPAPPACPAEVHELM------KLCWAPSPQDRPSFSALGPQL 298
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 7e-27
Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 47/278 (16%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G+ G VY+ + AVK ++ + +EFL E + EI+H N+++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLP 884
G C+ +I++E++ G+L L++ +E + + +++A+ YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNF-- 132
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH----SSN------WTAFAGTFGYAAP 934
+H D++++N L+ H V+DFG+++ + + WT AP
Sbjct: 133 --IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------AP 181
Query: 935 EIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLP 991
E + + K DV +FGVL E+ G P + +++ + L+ +R+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP-------YPGIDL--SQVYELLEKDYRME 232
Query: 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P +K+ +M C +P RP+ ++
Sbjct: 233 RP-EGCPEKVYELM---RACWQWNPSDRPSFAEIHQAF 266
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-26
Identities = 59/287 (20%), Positives = 114/287 (39%), Gaps = 41/287 (14%)
Query: 751 YEEIIKAID---DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF 806
YE + + +D + +G G G VYKA +G + A K + +++
Sbjct: 8 YEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE----TKSEEELEDY 63
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
+ E+ L H I+K G + +I+ E+ G++ I+ + Q
Sbjct: 64 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML--ELDRGLTEPQIQV 121
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
V + + AL++LH I+H D+ + NVL+ E + ++DFG++ +F
Sbjct: 122 VCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI 178
Query: 927 GTFGYAAPEIAHMMRATE-----KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM--- 978
GT + APE+ + K D+ S G+ +E+ + P +
Sbjct: 179 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP----------HHELNPM 228
Query: 979 --ITEINQNLDHRLPTPSRDVMDKLMSIME--VAILCLVESPEARPT 1021
+ +I ++ P+ K + + L ++PE RP+
Sbjct: 229 RVLLKIAKS-----DPPTLLTPSKWSVEFRDFLK-IALDKNPETRPS 269
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-26
Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 26/294 (8%)
Query: 740 SSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFD 798
S L + + ++ + + D GE IG+G GSV K PSG I AVK+
Sbjct: 6 SGKLKISPEQHWDFTAEDLKDLGE---IGRGAYGSVNKMVHKPSGQIMAVKRIR---STV 59
Query: 799 EMADQDEFLNEV-LALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
+ +Q + L ++ + + I++F+G +I E + S K +
Sbjct: 60 DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVL 118
Query: 858 EFGWNQRM--NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915
+ + + + AL++L + I+H DI N+LLD + DFGI+ L
Sbjct: 119 DDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176
Query: 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVH----SFGVLALEVIKGNHPRDYVSTN 971
S T AG Y APE + + YDV S G+ E+ G P
Sbjct: 177 V-DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP------- 228
Query: 972 FSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAI-LCLVESPEARPTMKK 1024
+ ++++ ++ Q + P S + + LCL + RP K+
Sbjct: 229 YPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKE 282
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-26
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 38/285 (13%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK +F E+ L ++H NI
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STEEHLRDFEREIEILKSLQHDNI 104
Query: 822 IKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+K+ G C +A ++ EYL GSL L+ + + + + + YL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 162
Query: 880 -HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N+L+++E+ + DFG+ K L + + APE
Sbjct: 163 TKRY----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 218
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI-------TEINQNLD- 987
+ + DV SFGV+ E+ F + + L
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278
Query: 988 -HRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RLP P D + +M+ C + RP+ + + +
Sbjct: 279 NGRLPRPDGCPDEIYMIMT------ECWNNNVNQRPSFRDLALRV 317
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-26
Identities = 59/281 (20%), Positives = 96/281 (34%), Gaps = 38/281 (13%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL-TE 815
I+D +G G G V+K +G + AVK+ + L ++ +
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG---NKEENKRILMDLDVVLKS 80
Query: 816 IRHRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
I++ G F +N I E + + + E + + A
Sbjct: 81 HDCPYIVQCFGTFITNTDVF-IAMELMGTCAEKLKKRMQGPIPE---RILGKMTVAIVKA 136
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
L YL ++H D+ N+LLD + + DFGI+ L AG Y AP
Sbjct: 137 LYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRSAGCAAYMAP 193
Query: 935 E-IAHMMRATEKYDVH----SFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
E I YD+ S G+ +E+ G P T+F ++T++ Q
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE----VLTKVLQEEPPL 249
Query: 990 LPTPS------RDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
LP + + CL + RP K
Sbjct: 250 LPGHMGFSGDFQSFVKD----------CLTKDHRKRPKYNK 280
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 9e-26
Identities = 56/262 (21%), Positives = 102/262 (38%), Gaps = 18/262 (6%)
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
L + + ++++ + +L + L + E NL L+L
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGV--TTIEGVQYLNNLIGLELKD 72
Query: 447 NNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE 506
N + +++ +N K+ S N + I ++ LDL+S I P
Sbjct: 73 NQI-TDLA-PLKNLTKITELELSGNPL--KNVSAIAGLQSIKTLDLTSTQITDVTP--LA 126
Query: 507 KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566
L +L L L+LNQ++ PL LT LQYL + ++S P + NLSKL L +
Sbjct: 127 GLSNLQVLYLDLNQITNISPLA--GLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADD 182
Query: 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFE 626
N+ + I L +L E+ L +N + P + N +L + L++ + +
Sbjct: 183 NKIS-DIS-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNN 238
Query: 627 EMRSLSRIDIAYNELQGPIPNS 648
+ + + P S
Sbjct: 239 NLVVPNVVKGPSGAPIAPATIS 260
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 5e-25
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 18/250 (7%)
Query: 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180
L+ + G + ++ + Q L + L + +I + L+ + L L
Sbjct: 15 DPALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLEL 70
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
N + + P L NL+ + L L+ N L ++ + L S+ LDL+ Q+ P +
Sbjct: 71 KDNQIT-DLAP-LKNLTKITELELSGNPL-KNVSAI-AGLQSIKTLDLTSTQITDVTPLA 126
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSL 300
LSNL +LYL N + P + L +L L + Q+ PL +NLS LT +
Sbjct: 127 --GLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPL--ANLSKLTTLKA 180
Query: 301 FNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360
+N +S I P +L L E+ L NQ+ V P + N S+L + L +
Sbjct: 181 DDNKIS-DISPLA-SLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFY 236
Query: 361 IGYLKSLSKL 370
L + +
Sbjct: 237 NNNLVVPNVV 246
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 7e-24
Identities = 59/310 (19%), Positives = 109/310 (35%), Gaps = 44/310 (14%)
Query: 239 FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLM 298
F L+N + K+++ + +L + L + +I L++L +
Sbjct: 13 FPDPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGV-TTIE-GVQYLNNLIGL 68
Query: 299 SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP 358
L +N ++ + P NL ++EL L N L V I L S++TL L + P
Sbjct: 69 ELKDNQIT-DLAP-LKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDVTP 124
Query: 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418
+ L +L L L N ++ + P + LT L +++ + L P NL+ L L
Sbjct: 125 --LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTL 178
Query: 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIP 478
+ + N + PNL + L N + +
Sbjct: 179 KADDNKI--SDISPLASLPNLIEVHLKNNQI-------------------------SDVS 211
Query: 479 PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYL 538
P + ++S L ++ L++ I + L N + P
Sbjct: 212 P-LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPI--APATISDNGTYASP 268
Query: 539 DLSANKLSSS 548
+L+ N S
Sbjct: 269 NLTWNLTSFI 278
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 51/279 (18%), Positives = 94/279 (33%), Gaps = 20/279 (7%)
Query: 315 NLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCR 374
L ++ + + + +L + TL + G + + YL +L LEL
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKD 72
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFG 434
N ++ + P + NLTK+ + + N L + L S++ L +
Sbjct: 73 NQITDLAP--LKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQI--TDVTPLA 126
Query: 435 DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
NL L L N + L + + + P + + SKL L
Sbjct: 127 GLSNLQVLYLDLNQITNISPLA--GLTNLQYLSIGNAQVS-DLTP-LANLSKLTTLKADD 182
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMG 554
N I I L +L ++ L NQ+S PL + + L + L+ +++
Sbjct: 183 NKIS-DIS-PLASLPNLIEVHLKNNQISDVSPLA--NTSNLFIVTLTNQTITNQPVFYNN 238
Query: 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
NL + P + +L+ N
Sbjct: 239 NLVVP--NVVKGPSGAPIAPATISDNGTYASPNLTWNLT 275
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 22/231 (9%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156
+L+ L L N + ++ P + NL+K+ L+L N L V I L ++ L
Sbjct: 59 VQYLNNLIGLELKDNQI-TDLAP-LKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDL 114
Query: 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV 216
+ PL LS + VL L N + I P L L+NL YL + N + + +
Sbjct: 115 TSTQITDVTPLA--GLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQV-SDLTPL 169
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276
NL+ L+ L N++ I LA+L NL ++L N + P + N +LF + L
Sbjct: 170 -ANLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
Query: 277 SENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYIN 327
+ + +NL ++ + + I P +S+ G Y +
Sbjct: 225 TNQTITNQPVFYNNNLVVPNVVKGPSGAP---IAP-----ATISDNGTYAS 267
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 5e-19
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 15/198 (7%)
Query: 444 LSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV 503
++Q I F A +N+ ++ D + L + I
Sbjct: 3 ITQPTAINVI-FPDPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIEG 58
Query: 504 QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLN 563
+ L +L L L NQ++ PL+ +LT++ L+LS N L + ++ L + L+
Sbjct: 59 -VQYLNNLIGLELKDNQITDLAPLK--NLTKITELELSGNPLKN--VSAIAGLQSIKTLD 113
Query: 564 LSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPG 623
L++ Q P L +L L L N + I P + + +L+ L++ + + DL P
Sbjct: 114 LTSTQITDVTP--LAGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQVSDLTP- 168
Query: 624 CFEEMRSLSRIDIAYNEL 641
+ L+ + N++
Sbjct: 169 -LANLSKLTTLKADDNKI 185
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 12/196 (6%)
Query: 95 FSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRML 154
+ + + L+L+ + ++ P ++ LS L+ L L NQ++ + P + LT L+ L
Sbjct: 101 SAIAGLQSIKTLDLTSTQI-TDVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYL 156
Query: 155 YFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP 214
+ PL LS + L N S I P L +L NL ++L NN + +
Sbjct: 157 SIGNAQVSDLTPLA--NLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQI-SDVS 211
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
+ N ++L I+ L+ + F NL ++ + P+ I + +
Sbjct: 212 PL-ANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAP--IAPATISDNGTYASP 268
Query: 275 DLSENQLFGSIPLSFS 290
+L+ N +S++
Sbjct: 269 NLTWNLTSFINNVSYT 284
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 3e-11
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 19/194 (9%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156
+ +L L L N + NI P ++ L+ L+ L +GN Q+S + P + +L+ L L
Sbjct: 125 LAGLSNLQVLYLDLNQI-TNISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKA 180
Query: 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV 216
D N + PL L + + L +N S L N SNL + L N ++
Sbjct: 181 DDNKISDISPLA--SLPNLIEVHLKNNQISD--VSPLANTSNLFIVTLTNQTITNQPVFY 236
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276
NL +++ P + A +S+ G +L + S I N+ F
Sbjct: 237 NNNLVVPNVVKGPSGA-----PIAPATISDNGT--YASPNLTWNLTSFINNVSYTF---- 285
Query: 277 SENQLFGSIPLSFS 290
+++ F + + FS
Sbjct: 286 NQSVTFKNTTVPFS 299
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 9e-26
Identities = 61/235 (25%), Positives = 92/235 (39%), Gaps = 36/235 (15%)
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN 472
S + L + N L +F P L LDLS+ +
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI----------------------- 64
Query: 473 IYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFG 530
+I S S L L L+ N I + + F L SL KL+ L+ G
Sbjct: 65 --QTIEDGAYQSLSHLSTLILTGNPI-QSLALGAFSGLSSLQKLVAVETNLASLENFPIG 121
Query: 531 SLTELQYLDLSANKLSS-SIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHL----S 584
L L+ L+++ N + S +P+ NL+ L +L+LS+N+ I L +
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI-QSIYCTDLRVLHQMPLLNL 180
Query: 585 ELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639
LDLS N + I P L+EL L N L + G F+ + SL +I + N
Sbjct: 181 SLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 1e-24
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 177 VLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLR 234
L L N + S + L L L+ + +I +L+ LS L L+ N ++
Sbjct: 32 NLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEI-QTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 235 GSIPFSL-ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS--FSN 291
S+ + LS+L L + +L IG+LK+L EL+++ N + S L FSN
Sbjct: 90 -SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI-QSFKLPEYFSN 147
Query: 292 LSSLTLMSLFNNSLSGSIPP----TQGNLEALS-ELGLYINQLDGVIPPSIGNLSSLRTL 346
L++L + L +N + SI + L+ L L +N ++ I P L+ L
Sbjct: 148 LTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKEL 205
Query: 347 YLYDNGFYGLVPNEIGYLKSLSKLELCRN 375
L N + L SL K+ L N
Sbjct: 206 ALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 4e-23
Identities = 59/243 (24%), Positives = 90/243 (37%), Gaps = 38/243 (15%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
IP + + LDL N L + L++L + +I
Sbjct: 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIE---------- 68
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRG 235
+ LS+L+ L L N + S+ L+SL L + L
Sbjct: 69 -----DGAYQS--------LSHLSTLILTGNPI-QSLALGAFSGLSSLQKLVAVETNLA- 113
Query: 236 SIP-FSLANLSNLGILYLYKNSLFGFI-PSVIGNLKSLFELDLSENQLFGSIPL-SFSNL 292
S+ F + +L L L + N + F P NL +L LDLS N++ SI L
Sbjct: 114 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI-QSIYCTDLRVL 172
Query: 293 SSLTLM----SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYL 348
+ L+ L N ++ I P L EL L NQL V L+SL+ ++L
Sbjct: 173 HQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWL 231
Query: 349 YDN 351
+ N
Sbjct: 232 HTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 4e-23
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 10/209 (4%)
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
S LDLS N LR +S + L +L L + + +L L L L+ N +
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88
Query: 282 FGSIPL-SFSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSI-G 338
S+ L +FS LSSL + +L+ S+ G+L+ L EL + N + P
Sbjct: 89 -QSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS 146
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSL----SKLELCRNHLSGVIPHSIGNLTKLVLV 394
NL++L L L N + ++ L + L+L N ++ I +L +
Sbjct: 147 NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKEL 205
Query: 395 NMCENHLFGLIPKSFRNLTSLERLRFNQN 423
+ N L + F LTSL+++ + N
Sbjct: 206 ALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 5e-21
Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 13/175 (7%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS---GGVPLEFGSL 532
IP + + LDLS N + F L L L+ ++ G + SL
Sbjct: 21 KIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGA---YQSL 75
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592
+ L L L+ N + S + LS L L L L EL+++HN
Sbjct: 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135
Query: 593 LQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSL----SRIDIAYNELQ 642
+Q P+ N+ +LE L+LS N + + + + +D++ N +
Sbjct: 136 IQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 7e-21
Identities = 54/243 (22%), Positives = 92/243 (37%), Gaps = 32/243 (13%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
IP ++ S + L L N L L L+L R + + + +L+ L
Sbjct: 22 IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
+ + N + L +F L+SL++L + NL G L L+++ N +
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI--- 136
Query: 453 ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-FEKLFSL 511
++F F+ + + L+ LDLSSN I I L +
Sbjct: 137 -----QSFKLPEYFS---------------NLTNLEHLDLSSNKIQ-SIYCTDLRVLHQM 175
Query: 512 ----NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNN 567
L L+LN ++ P F + L+ L L N+L S L+ L + L N
Sbjct: 176 PLLNLSLDLSLNPMNFIQPGAFKEIR-LKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
Query: 568 QFN 570
++
Sbjct: 235 PWD 237
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 4e-20
Identities = 57/233 (24%), Positives = 83/233 (35%), Gaps = 40/233 (17%)
Query: 321 ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV 380
L L N L + S + L+ L L + L LS L L N + +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 91
Query: 381 ---IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL-FGKVYEAFGDH 436
+ +L KLV V +L L +L +L+ L N + K+ E F +
Sbjct: 92 ALGAFSGLSSLQKLVAVE---TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 148
Query: 437 PNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQV----LD 491
NL LDLS N + SI ++ + LD
Sbjct: 149 TNLEHLDLSSNKI-------------------------QSIYCTDLRVLHQMPLLNLSLD 183
Query: 492 LSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543
LS N + I F+++ L +L L+ NQL F LT LQ + L N
Sbjct: 184 LSLNPM-NFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 6e-17
Identities = 49/189 (25%), Positives = 72/189 (38%), Gaps = 32/189 (16%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
+ S HL L L+ N + ++ S LS L+ L L+ + IGHL L+ L
Sbjct: 72 YQSLSHLSTLILTGNPI-QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP- 214
N + S L FS NL+NL +L L++N + SI
Sbjct: 131 VAHNLIQ-SFKL--------------PEYFS--------NLTNLEHLDLSSNKI-QSIYC 166
Query: 215 NVMGNLNSLSI----LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
+ L+ + + LDLS N + I L L L N L + L S
Sbjct: 167 TDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTS 225
Query: 271 LFELDLSEN 279
L ++ L N
Sbjct: 226 LQKIWLHTN 234
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 64/284 (22%), Positives = 110/284 (38%), Gaps = 36/284 (12%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G+G G V +G AVK + + +AD E+ L + H NI
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD---LKKEIEILRNLYHENI 85
Query: 822 IKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+K+ G C+ + ++ E+L GSL L + + Q++ + + YL
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLG 143
Query: 880 -HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
VH D++++NVL++SEH+ + DFG+ K + +T + APE
Sbjct: 144 SRQY----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPE 199
Query: 936 IAHMMRATEKYDVHSFGVLALEVI-----KGNHPRDYVSTNFSSFSNMI-TEINQNLD-- 987
+ DV SFGV E++ + ++ + M T + L
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259
Query: 988 HRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RLP P D + +LM C P R + + +
Sbjct: 260 KRLPCPPNCPDEVYQLM------RKCWEFQPSNRTSFQNLIEGF 297
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 61/289 (21%), Positives = 115/289 (39%), Gaps = 37/289 (12%)
Query: 753 EIIKAID-DFGEKYCIGKGRQGSVYKAELPSG-----IIFAVKKFNSQLLFDEMADQ-DE 805
I+K + + +G G G+VYK I A+K+ E
Sbjct: 10 RILKETEFKKIKV--LGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKE 63
Query: 806 FLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM 865
L+E + + + ++ + G C ++++ + G L +++ G +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLL 120
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925
N +A ++YL L VH D++++NVL+ + ++DFG+AK L + A
Sbjct: 121 NWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 926 AGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEI 982
G + A E T + DV S+GV E++ G+ P + +EI
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP-------YDGIPA--SEI 228
Query: 983 NQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ L+ RLP P + IM + C + ++RP +++
Sbjct: 229 SSILEKGERLPQPP-ICTIDVYMIM---VKCWMIDADSRPKFRELIIEF 273
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-25
Identities = 64/282 (22%), Positives = 113/282 (40%), Gaps = 34/282 (12%)
Query: 767 IGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G+G G V +G + AVK + + + E+ L + H +I
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD---AGPQHRSGWKQEIDILRTLYHEHI 95
Query: 822 IKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
IK+ G C +A + +V EY+ GSL L G Q + + + ++YLH
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLH 151
Query: 880 -HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++NVLLD++ + DFG+AK + + + APE
Sbjct: 152 AQHY----IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 207
Query: 936 IAHMMRATEKYDVHSFGVLALEVI-----KGNHPRDYVSTNFSSFSNMI-TEINQNLD-- 987
+ DV SFGV E++ + P ++ + M + + L+
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267
Query: 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RLP P ++ +M+ C RPT + + +L
Sbjct: 268 ERLPRP-DKCPAEVYHLMK---NCWETEASFRPTFENLIPIL 305
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-25
Identities = 63/275 (22%), Positives = 109/275 (39%), Gaps = 36/275 (13%)
Query: 767 IGKGRQGSVYKAEL-----PSGIIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G G G+V+K I +K + S + +LA+ + H
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-----RQSFQAVTDHMLAIGSLDHA 75
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+I++ G C +V++YL GSL ++ G +N +A + YL
Sbjct: 76 HIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLE 132
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIA 937
+ VH +++++NVLL S + V+DFG+A L P + A E
Sbjct: 133 EHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 938 HMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPS 994
H + T + DV S+GV E++ G P ++ E+ L+ RL P
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMTFGAEP-------YAGLRL--AEVPDLLEKGERLAQP- 239
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ + +M + C + RPT K++ N
Sbjct: 240 QICTIDVYMVM---VKCWMIDENIRPTFKELANEF 271
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 2e-25
Identities = 63/303 (20%), Positives = 112/303 (36%), Gaps = 17/303 (5%)
Query: 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP 238
T+ + +I P + L S+ LNS+ + + + ++ S+
Sbjct: 4 TITVSTPIKQIFP-DDAFAETIKDNLKKKSV-TDAVTQ-NELNSIDQIIANNSDIK-SVQ 59
Query: 239 FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLM 298
+ L N+ L+L N L + NLK+L L L EN++ + S +L L +
Sbjct: 60 G-IQYLPNVTKLFLNGNKLTDI--KPLTNLKNLGWLFLDENKI-KDLS-SLKDLKKLKSL 114
Query: 299 SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP 358
SL +N +S I +L L L L N++ + + L+ L TL L DN +VP
Sbjct: 115 SLEHNGIS-DINGLV-HLPQLESLYLGNNKITDITV--LSRLTKLDTLSLEDNQISDIVP 170
Query: 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418
+ L L L L +NH+S + + L L ++ + NL +
Sbjct: 171 --LAGLTKLQNLYLSKNHISDLRA--LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 226
Query: 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIP 478
+ +L + + E+SF + +G A +
Sbjct: 227 KNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPL 286
Query: 479 PEI 481
E+
Sbjct: 287 KEV 289
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 109 bits (272), Expect = 1e-24
Identities = 64/390 (16%), Positives = 124/390 (31%), Gaps = 18/390 (4%)
Query: 116 NIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLI 175
I P ++ +L ++ + Q L + + + + + S+ I L +
Sbjct: 13 QIFP-DDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQ-GIQYLPNV 67
Query: 176 NVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRG 235
L L N + I P L NL NL +L+L+ N + + ++ +L L L L N +
Sbjct: 68 TKLFLNGNKLT-DIKP-LTNLKNLGWLFLDENKI-KDLSSL-KDLKKLKSLSLEHNGIS- 122
Query: 236 SIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSL 295
I L +L L LYL N + +V+ L L L L +NQ+ I + L+ L
Sbjct: 123 DIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI-SDIV-PLAGLTKL 177
Query: 296 TLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYG 355
+ L N +S + L+ L L L+ + NL T+ D
Sbjct: 178 QNLYLSKNHIS-DLRALA-GLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT 235
Query: 356 LVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSL 415
++ + + + + K ++
Sbjct: 236 PEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKEVYTVSYD 295
Query: 416 ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWR-NFPKLGTFNASMNNIY 474
+ + P W N + + ++ ++
Sbjct: 296 VDGTVIKTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFNTDYMSGNDFTLYAVF 355
Query: 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ 504
+ E + V + N + K+P +
Sbjct: 356 KAETTEKTVNLTRYVKYIRGNAGIYKLPRE 385
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-24
Identities = 58/293 (19%), Positives = 109/293 (37%), Gaps = 20/293 (6%)
Query: 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLF 426
+ + + + P + + N+ + + + ++ L S++++ N +++
Sbjct: 1 MGETITVSTPIKQIFPDD--AFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDI- 55
Query: 427 GKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK 486
K + PN+T L L+ N L +I N LG N I + + D K
Sbjct: 56 -KSVQGIQYLPNVTKLFLNGNKL-TDIK-PLTNLKNLGWLFLDENKI-KDLSS-LKDLKK 110
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
L+ L L N I I L L L L N+++ L LT+L L L N++S
Sbjct: 111 LKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKITDITVLS--RLTKLDTLSLEDNQIS 166
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMES 606
+P + L+KL L LS N + L +L L+L + N+
Sbjct: 167 DIVPLA--GLTKLQNLYLSKNHISD--LRALAGLKNLDVLELFSQECLNKPINHQSNLVV 222
Query: 607 LEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLMEGN 659
+ + +L P + + ++ ++ + S F + G
Sbjct: 223 PNTVKNTDGSLVT--PEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGK 273
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 8e-24
Identities = 58/268 (21%), Positives = 107/268 (39%), Gaps = 24/268 (8%)
Query: 356 LVPNEI------GYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409
V I K L + ++ + L + + + + + +
Sbjct: 6 TVSTPIKQIFPDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV--QGI 61
Query: 410 RNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNAS 469
+ L ++ +L N N L + + NL +L L +N + ++S + ++ KL + +
Sbjct: 62 QYLPNVTKLFLNGNKL--TDIKPLTNLKNLGWLFLDENKI-KDLS-SLKDLKKLKSLSLE 117
Query: 470 MNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEF 529
N I I + +L+ L L +N I I V +L L+ L L NQ+S VPL
Sbjct: 118 HNGI-SDING-LVHLPQLESLYLGNNKIT-DITV-LSRLTKLDTLSLEDNQISDIVPLA- 172
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLS 589
LT+LQ L LS N +S +++ L L L L + + +K L+ + + +
Sbjct: 173 -GLTKLQNLYLSKNHISD--LRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNT 229
Query: 590 HNFLQGEIPPQICNMESLEELNLSHNNL 617
L P I + E+ N+ +
Sbjct: 230 DGSLV--TPEIISDDGDYEKPNVKWHLP 255
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 92.1 bits (228), Expect = 3e-19
Identities = 57/269 (21%), Positives = 91/269 (33%), Gaps = 40/269 (14%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156
P++ L L+ N L +I P ++NL L L L N++ + + L L+ L
Sbjct: 61 IQYLPNVTKLFLNGNKL-TDIKP-LTNLKNLGWLFLDENKIKDLSSLK--DLKKLKSLSL 116
Query: 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV 216
+ N I ++ L +L L LYL NN + + V
Sbjct: 117 EHN--------GISDIN------------------GLVHLPQLESLYLGNNKI--TDITV 148
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276
+ L L L L NQ+ I LA L+ L LYL KN + + LK+L L+L
Sbjct: 149 LSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHISDLRA--LAGLKNLDVLEL 204
Query: 277 SENQLFGSIPLSFSNLSSLTLMSLFNNSLSG----SIPPTQGNLEALSELGLYINQLDGV 332
+ SNL + + SL S L + N++ +
Sbjct: 205 FSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFI 264
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEI 361
+ + + V
Sbjct: 265 FYQPVTIGKAKARFHGRVTQPLKEVYTVS 293
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 40/276 (14%)
Query: 767 IGKGRQGSVYKAELPSG----IIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
IG+G+ G V++ S + A+K K + + +++FL E L + + H +
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-----DSVREKFLQEALTMRQFDHPH 77
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL-H 879
I+K G + +I+ E G L + L+ + ++ AL+YL
Sbjct: 78 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES 134
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEI 936
VH DI+++NVL+ S + DFG+++++ S + + + APE
Sbjct: 135 KRF----VHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPES 188
Query: 937 AHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTP 993
+ R T DV FGV E++ G P F N ++ ++ RLP P
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKP-------FQGVKN--NDVIGRIENGERLPMP 239
Query: 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ L S+M C P RP ++ L
Sbjct: 240 -PNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 271
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 3e-25
Identities = 65/310 (20%), Positives = 124/310 (40%), Gaps = 56/310 (18%)
Query: 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEV 810
+E+ +K + + +G G G+V G AVK+ D L E+
Sbjct: 9 FEQSLKNLVVSEKI--LGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEI 59
Query: 811 LALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM---- 865
LTE H N+I+++ + + +I E + +L +++ + E Q+
Sbjct: 60 KLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPI 118
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH-------------VSDFGIA 912
++++ +A+ +++LH I+H D+ +N+L+ + +SDFG+
Sbjct: 119 SLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 913 KFLNPHSSNWTA----FAGTFGYAAPEI-------AHMMRATEKYDVHSFGVLALEVI-K 960
K L+ S++ +GT G+ APE+ R T D+ S G + ++ K
Sbjct: 176 KKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 961 GNHPRDYVSTNFSSFSNMITEI---NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPE 1017
G HP F + + I +LD R ++ + ++ + P
Sbjct: 236 GKHP-------FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLIS---QMIDHDPL 285
Query: 1018 ARPTMKKVCN 1027
RPT KV
Sbjct: 286 KRPTAMKVLR 295
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 3e-25
Identities = 61/291 (20%), Positives = 112/291 (38%), Gaps = 47/291 (16%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKF 824
+ +G VY+A+ + SG +A+K+ LL +E + EV + ++ H NI++F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKR----LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 825 HGFCSNAQHS-------FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
S + F++ L +G L LK + + + + A+ +
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN------------WTAF 925
+H PPI+H D+ +N+LL ++ + DFG A ++ +
Sbjct: 152 MHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 926 AGTFGYAAPEIAHMMR---ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI 982
T Y PEI + EK D+ + G + + HP F +
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP----------FEDGAKLR 260
Query: 983 NQNLDHRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
N + +P V L+ M L +PE R ++ +V + L +
Sbjct: 261 IVNGKYSIPPHDTQYTVFHSLIRAM------LQVNPEERLSIAEVVHQLQE 305
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-25
Identities = 59/279 (21%), Positives = 108/279 (38%), Gaps = 35/279 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEV-LALTEI 816
DD +G+G G V K +PSG I AVK+ + + +Q L ++ +++ +
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDLDISMRTV 63
Query: 817 RHRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKD-DAAAKEFGWNQRMNVIKGVANA 874
+ F+G I E +D SL K + + + + A
Sbjct: 64 DCPFTVTFYGALFREGDVW-ICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 121
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
L +LH ++H D+ NVL+++ + + DFGI+ +L AG Y AP
Sbjct: 122 LEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DDVAKDIDAGCKPYMAP 178
Query: 935 EIAHMMRATEKYDVH----SFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
E + + Y V S G+ +E+ P D ++ + + ++ + +L
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD----SWGTPFQQLKQVVEEPSPQL 234
Query: 991 PTPS-----RDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
P D + CL ++ + RPT +
Sbjct: 235 PADKFSAEFVDFTSQ----------CLKKNSKERPTYPE 263
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 4e-25
Identities = 61/298 (20%), Positives = 112/298 (37%), Gaps = 49/298 (16%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DF E +G+G G V KA +A+KK L+EV+ L +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-----TEEKLSTILSEVMLLASLN 60
Query: 818 HRNIIKFHGF-------------CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
H+ +++++ FI EY + G+L ++ + ++ ++
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR--DEY 118
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-------- 916
+ + + ALSY+H I+H D+ N+ +D + DFG+AK ++
Sbjct: 119 WRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 917 ------PHSSNWTAFAGTFGYAAPE-IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS 969
S N T+ GT Y A E + EK D++S G++ E+I +P
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGM 232
Query: 970 TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ + ++ V K++ L + P RP + + N
Sbjct: 233 ERVNILKK-LRSVSIEFPPDFDDNKMKVEKKIIR------LLIDHDPNKRPGARTLLN 283
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 5e-25
Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 52/300 (17%)
Query: 750 LYEEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQD 804
L E + A+ D + +G G G VYK + +G + A+K + +++
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-----TGDEEE 65
Query: 805 EFLNEVLALTEI-RHRNIIKFHG------FCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
E E+ L + HRNI ++G ++V E+ GS+T ++K+
Sbjct: 66 EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGN 124
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + + LS+LH ++H DI +NVLL E + DFG++ L+
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181
Query: 918 HSSNWTAFAGTFGYAAPEIAHMMRATE-----KYDVHSFGVLALEVIKGNHPRDYVSTNF 972
F GT + APE+ + K D+ S G+ A+E+ +G P
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP-------- 233
Query: 973 SSFSNM-----ITEINQNLDHRLPTP---SRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
+M + I +N P P S+ K S +E CLV++ RP ++
Sbjct: 234 --LCDMHPMRALFLIPRN-----PAPRLKSKKWSKKFQSFIE---SCLVKNHSQRPATEQ 283
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 6e-25
Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 34/275 (12%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFN-SQLLFDEMADQDEFLNEVLALTE 815
++DF +GKG+ G+VY A E S I A+K +QL + Q EV +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--LRREVEIQSH 65
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKG 870
+RH NI++ +G+ +A +++ EY G++ L+ D+ + I
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--------ITE 117
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
+ANALSY H ++H DI +N+LL S E ++DFG + P S GT
Sbjct: 118 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTD-LCGTLD 172
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
Y PE+ EK D+ S GVL E + G P + + + I+ + +
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFV 230
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+RD++ +L L +P RP +++V
Sbjct: 231 TEGARDLISRL----------LKHNPSQRPMLREV 255
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 8e-25
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTE 815
F + IG G G+VY A ++ + + A+KK + + +++ + + EV L +
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMS---YSGKQSNEKWQDIIKEVRFLQK 110
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+RH N I++ G +++V EY GS + +L+ K + V G L
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE--VHKKPLQEVEIAAVTHGALQGL 167
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YLH ++H D+ + N+LL + DFG A + P +S F GT + APE
Sbjct: 168 AYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS----FVGTPYWMAPE 220
Query: 936 IAHMMRATE---KYDVHSFGVLALEVIKGNHP 964
+ M + K DV S G+ +E+ + P
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 9e-25
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
F E +G G V+ + +G +FA+K F + NE+ L +I+H
Sbjct: 12 IFMEV--LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRD----SSLENEIAVLKKIKH 65
Query: 819 RNIIKFHGFCSNAQHSFIVSEY----------LDRGSLTTILKDDAAAKEFGWNQRMNVI 868
NI+ + H ++V + L+RG T + DA+ VI
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYT---EKDAS----------LVI 112
Query: 869 KGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPHSSNWTA 924
+ V +A+ YLH + IVH D+ +N+L + E ++DFG++K +
Sbjct: 113 QQVLSAVKYLHENG----IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--MST 166
Query: 925 FAGTFGYAAPEIAHMMRATEKYDVHSFGV 953
GT GY APE+ ++ D S GV
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGV 195
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 9e-25
Identities = 58/266 (21%), Positives = 96/266 (36%), Gaps = 46/266 (17%)
Query: 713 RKRDSQEKRRTFFGPKATDDFGDPFGFSSVLNFNGKFL---YEEIIKAIDDFGEKYCIGK 769
R + + P G P+ F LN G + YE + CI
Sbjct: 46 RSDSETKGASEGWCPYC----GSPYSFLPQLN-PGDIVAGQYE-----VKG-----CIAH 90
Query: 770 GRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMAD-QDEFLNEVLALTEIRHRNIIKFH 825
G G +Y A + +G +K L+ A+ Q + E L E+ H +I++
Sbjct: 91 GGLGWIYLALDRNV-NGRPVVLK----GLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145
Query: 826 GF-----CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
F +IV EY+ SL + + + + + ALSYLH
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHS 200
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
+V+ D+ +N++L E + + D G +N GT G+ APEI
Sbjct: 201 I---GLVYNDLKPENIMLT-EEQLKLIDLGAVSRINSFG----YLYGTPGFQAPEIV-RT 251
Query: 941 RATEKYDVHSFGVLALEVIKGNHPRD 966
T D+++ G + R+
Sbjct: 252 GPTVATDIYTVGRTLAALTLDLPTRN 277
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-24
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 27/255 (10%)
Query: 711 GQRKRDSQEKRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCI--- 767
G + + D F + K++ + + + Y I
Sbjct: 3 GSHHHHHHGSKVRGKYDGPKINDYDKF----YEDIWKKYVPQPVEVKQGSVYDYYDILEE 58
Query: 768 -GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
G G G V++ E +G +F K N+ D+ NE+ + ++ H +I H
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTP----YPLDKYTVKNEISIMNQLHHPKLINLH 114
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR--MNVIKGVANALSYLH-HDC 882
+ ++ E+L G L D AA+++ ++ +N ++ L ++H H
Sbjct: 115 DAFEDKYEMVLILEFLSGGELF----DRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS- 169
Query: 883 LPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
IVH DI +N++ +++ + V DFG+A LNP T +AAPEI
Sbjct: 170 ---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT-ATAEFAAPEIVDRE 225
Query: 941 RATEKYDVHSFGVLA 955
D+ + GVL
Sbjct: 226 PVGFYTDMWAIGVLG 240
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 61/274 (22%), Positives = 109/274 (39%), Gaps = 36/274 (13%)
Query: 767 IGKGRQGSVYKAELPSG----IIFAVKKFNSQLLFDEMADQ-DEFLNEVLALTEIRHRNI 821
+G+G G VY+ + I AVK D D ++F++E + + + H +I
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK----DCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+K G + ++I+ E G L L+ + + + A++YL
Sbjct: 76 VKLIGIIEE-EPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAH 938
VH DI+ +N+L+ S + DFG+++++ ++ + T + +PE +
Sbjct: 133 NC---VHRDIAVRNILVASPECVKLGDFGLSRYIE--DEDYYKASVTRLPIKWMSPESIN 187
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDH--RLPTPSR 995
R T DV F V E++ G P F N ++ L+ RLP P
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQP-------FFWLEN--KDVIGVLEKGDRLPKP-D 237
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
L ++M C P RP ++ L
Sbjct: 238 LCPPVLYTLM---TRCWDYDPSDRPRFTELVCSL 268
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-24
Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
E+ +GKG V + ++ +G +A N++ L D + E ++H
Sbjct: 14 QLFEE--LGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKH 69
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------DDAAAKEFGWNQRMNVIKGV 871
NI++ H S H +++ + + G L I+ DA+ + I+ +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS----------HCIQQI 119
Query: 872 ANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPHSSNWTAFAG 927
A+ + H +VH ++ +N+LL S+ + ++DFG+A + W FAG
Sbjct: 120 LEAVLHCHQMG----VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 175
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGV 953
T GY +PE+ + D+ + GV
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGV 201
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 1e-24
Identities = 54/198 (27%), Positives = 79/198 (39%), Gaps = 12/198 (6%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
C +PP L + L+L+ N L+ + L+ L+L + +L
Sbjct: 17 CDKRNLTALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD- 73
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMS 299
L LG L L N L +P + L +L LD+S N+L S+PL L L +
Sbjct: 74 -GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRL-TSLPLGALRGLGELQELY 130
Query: 300 LFNNSLSGSIPP-TQGNLEALSELGLYINQLDGVIPPSI-GNLSSLRTLYLYDNGFYGLV 357
L N L ++PP L +L L N L +P + L +L TL L +N Y +
Sbjct: 131 LKGNELK-TLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLYT-I 187
Query: 358 PNEIGYLKSLSKLELCRN 375
P L L N
Sbjct: 188 PKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-23
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
++PP++ +L LS N + L +L L+ +L+ + + G+L L
Sbjct: 24 ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV-DGTLPVL 79
Query: 536 QYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQG 595
LDLS N+L S+P L L L++S N+ L L EL L N L+
Sbjct: 80 GTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK- 137
Query: 596 EIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
+PP + LE+L+L++NNL +L G + +L + + N L
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 4e-22
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 471 NNIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEF 529
N+ + ++L L+L + K+ V L L L L+ NQL +PL
Sbjct: 40 ENLLYTFSLATLMPYTRLTQLNLDRAEL-TKLQV-DGTLPVLGTLDLSHNQLQS-LPLLG 96
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLS 589
+L L LD+S N+L+S ++ L +L L L N+ P L +L L+
Sbjct: 97 QTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156
Query: 590 HNFLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639
+N L E+P + +E+L+ L L N+L+ + G F L + N
Sbjct: 157 NNNLT-ELPAGLLNGLENLDTLLLQENSLYTIPKGFF-GSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 4e-22
Identities = 56/237 (23%), Positives = 78/237 (32%), Gaps = 58/237 (24%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
+PP + L L N L +
Sbjct: 25 LPPDL--PKDTTILHLSENLLY-------------------------TFS---------- 47
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS 236
+L + L L L+ L + V G L L LDLS NQL+ S
Sbjct: 48 -------------LATLMPYTRLTQLNLDRAEL-TKLQ-VDGTLPVLGTLDLSHNQLQ-S 91
Query: 237 IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSL 295
+P L L +L + N L + L L EL L N+L ++P + L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL-KTLPPGLLTPTPKL 150
Query: 296 TLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
+SL NN+L+ +P LE L L L N L IP L +L+ N
Sbjct: 151 EKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 2e-21
Identities = 52/208 (25%), Positives = 78/208 (37%), Gaps = 19/208 (9%)
Query: 366 SLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNN 424
S ++ + +L+ +P + + T L L N L+ + T L +L ++
Sbjct: 11 SHLEVNCDKRNLT-ALPPDLPKDTTILHLSE---NLLYTFSLATLMPYTRLTQLNLDRAE 66
Query: 425 LFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS 484
L + G P L LDLS N L + + P L + S N + S+P
Sbjct: 67 L--TKLQVDGTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRL-TSLPLGALRG 122
Query: 485 -SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLS---GGVPLEFGSLTELQYLD 539
+LQ L L N + +P L KL L N L+ G+ L L L
Sbjct: 123 LGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAGL---LNGLENLDTLL 178
Query: 540 LSANKLSSSIPKSMGNLSKLHYLNLSNN 567
L N L +IPK L + L N
Sbjct: 179 LQENSL-YTIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 4e-21
Identities = 57/278 (20%), Positives = 87/278 (31%), Gaps = 81/278 (29%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
+ S ++ + L ++P L + IL+L +N L+ F + + L +L+L
Sbjct: 8 KVASHLEVNCDKRNLT-ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI- 337
+L + + L L + L +N L S+P L AL+ L + N+L +P
Sbjct: 65 AEL-TKLQV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGAL 120
Query: 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMC 397
L L+ LYL N LK+L
Sbjct: 121 RGLGELQELYLKGNE-----------LKTLP----------------------------- 140
Query: 398 ENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
P LE+L NNL NL L L +N+LY
Sbjct: 141 --------PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY------- 185
Query: 458 RNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495
+IP S L L N
Sbjct: 186 ------------------TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 2e-20
Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 12/184 (6%)
Query: 100 FPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDV 158
L+LS N+L ++L L+L +L+ + Q G L L L
Sbjct: 30 PKDTTILHLSENLL-YTFSLATLMPYTRLTQLNLDRAELTKL--QVDGTLPVLGTLDLSH 86
Query: 159 NHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGSIP-NV 216
N L S+PL L + VL + N + +P L L LYL N L ++P +
Sbjct: 87 NQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNEL-KTLPPGL 143
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSL-ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ L L L+ N L +P L L NL L L +NSL+ IP L
Sbjct: 144 LTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAF 201
Query: 276 LSEN 279
L N
Sbjct: 202 LHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 5e-15
Identities = 41/160 (25%), Positives = 62/160 (38%), Gaps = 28/160 (17%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156
+ P L L+LS N L ++P L L LD+ N+L+ + + L L+ LY
Sbjct: 73 DGTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131
Query: 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP-N 215
N L ++P P L L L L NN+L +P
Sbjct: 132 KGNELK-TLP-----------------------PGLLTPTPKLEKLSLANNNL-TELPAG 166
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN 255
++ L +L L L +N L +IP L +L+ N
Sbjct: 167 LLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 2e-24
Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 30/263 (11%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFL----NEVLALTEIRHRNI 821
+G G +VY AE I A+K +F +++E L EV +++ H+NI
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIK-----AIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+ ++V EY++ +L+ ++ + +N + + + + H
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHDM 130
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-GTFGYAAPEIAHMM 940
IVH DI +N+L+DS + DFGIAK L+ S T GT Y +PE A
Sbjct: 131 ---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 941 RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS--NMITEINQNLDHRLPTPSRDVM 998
E D++S G++ E++ G P F+ ++ +++ +P + DV
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPP----------FNGETAVSIAIKHIQDSVPNVTTDVR 237
Query: 999 DKLMSIMEVAIL-CLVESPEARP 1020
+ + IL + R
Sbjct: 238 KDIPQSLSNVILRATEKDKANRY 260
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-24
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFN-SQLLFDEMADQDEFLNEVLALTEIR 817
+ E IGKG V + +G FAVK + ++ ++ E ++
Sbjct: 27 ELCEV--IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H +I++ S+ ++V E++D L I+K A + + ++ + AL
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 877 YLH-HDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPHSSNWTAFAGTFGYA 932
Y H ++ I+H D+ VLL S+ + + FG+A L GT +
Sbjct: 145 YCHDNN----IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 200
Query: 933 APEIAHMMRATEKYDVHSFGVL 954
APE+ + DV GV+
Sbjct: 201 APEVVKREPYGKPVDVWGCGVI 222
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 4e-24
Identities = 49/263 (18%), Positives = 105/263 (39%), Gaps = 32/263 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQDEFL----NEVLALTEIRHR 819
+G+G G VY+AE + A+K L+ + ++ F E ++
Sbjct: 42 VGRGGMGDVYEAEDTVRERIV--ALK-----LMSETLSSDPVFRTRMQREARTAGRLQEP 94
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+++ H F ++ ++ L +L+ + + +++ + +AL H
Sbjct: 95 HVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGP---LAPPRAVAIVRQIGSALDAAH 151
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT-AFAGTFGYAAPEIAH 938
H D+ +N+L+ ++ A++ DFGIA GT Y APE
Sbjct: 152 AA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFS 208
Query: 939 MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
AT + D+++ + E + G+ P + + ++ + +++ +P PS V
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPP-------YQ--GDQLSVMGAHINQAIPRPS-TVR 258
Query: 999 DKLMSIMEVAIL-CLVESPEARP 1020
+ + I + ++PE R
Sbjct: 259 PGIPVAFDAVIARGMAKNPEDRY 281
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 5e-24
Identities = 46/221 (20%), Positives = 93/221 (42%), Gaps = 21/221 (9%)
Query: 744 NFNGKFLYEEIIKAIDDFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFD 798
+ ++ + + D + Y I G G G V++ E +G FA K +
Sbjct: 138 DIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---- 193
Query: 799 EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858
+D++ E+ ++ +RH ++ H + ++ E++ G L + A +
Sbjct: 194 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF----EKVADEH 249
Query: 859 FGWNQR--MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKF 914
++ + ++ V L ++H + VH D+ +N++ ++ + DFG+
Sbjct: 250 NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306
Query: 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955
L+P S GT +AAPE+A D+ S GVL+
Sbjct: 307 LDPKQSVKVTT-GTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 8e-24
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQ--FEKLFSLNKLILNLNQLSGGVPLEFGSLT 533
++P + S +LDLS N++ ++ + +L +L+ L+L+ N L+ F +
Sbjct: 32 NVPQSL--PSYTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP 88
Query: 534 ELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHN 591
L+YLDLS+N L + + + + +L L L L NN + FE + L +L LS N
Sbjct: 89 NLRYLDLSSNHLHT-LDEFLFSDLQALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQN 146
Query: 592 FLQGEIPPQI----CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDI 636
+ P ++ + L L+LS N L L +++ + + +
Sbjct: 147 QIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGL 194
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 89.9 bits (223), Expect = 3e-19
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 16/181 (8%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN--VMGNLNSLSILDLSQNQLRGSIP 238
C +P SL S A L L++N+L + L +L L LS N L I
Sbjct: 25 CSKQQLPNVPQSL--PSYTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLN-FIS 80
Query: 239 -FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLT 296
+ + NL L L N L + +L++L L L N + + +F +++ L
Sbjct: 81 SEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHI-VVVDRNAFEDMAQLQ 139
Query: 297 LMSLFNNSLSGSIPP----TQGNLEALSELGLYINQLDGVIPPSIGNLSSL--RTLYLYD 350
+ L N +S P L L L L N+L + + L + LYL++
Sbjct: 140 KLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198
Query: 351 N 351
N
Sbjct: 199 N 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 6e-18
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 11/156 (7%)
Query: 469 SMNNIYGSIPPEIGDS--SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGV 525
S NN+ + E + + L L LS NH+ I + F + +L L L+ N L
Sbjct: 47 SHNNL-SRLRAEWTPTRLTNLHSLLLSHNHL-NFISSEAFVPVPNLRYLDLSSNHLHTLD 104
Query: 526 PLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE----FEKLI 581
F L L+ L L N + + ++++L L LS NQ + P E KL
Sbjct: 105 EFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI-SRFPVELIKDGNKLP 163
Query: 582 HLSELDLSHNFLQGEIPPQICNMESLEELNLS-HNN 616
L LDLS N L+ + + + + L HNN
Sbjct: 164 KLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 4e-17
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 533 TELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSH 590
+ LDLS N LS + L+ LH L LS+N + I +E F + +L LDLS
Sbjct: 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHL-NFISSEAFVPVPNLRYLDLSS 97
Query: 591 NFLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
N L + + ++++LE L L +N++ + FE+M L ++ ++ N++
Sbjct: 98 NHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 78.7 bits (194), Expect = 1e-15
Identities = 48/198 (24%), Positives = 76/198 (38%), Gaps = 38/198 (19%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEI-GHLTCLRMLYFDVNHLHGSIPLEIGKLSLI 175
+P + S LDL +N LS + + LT L L NHL+
Sbjct: 33 VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN------------- 77
Query: 176 NVLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQL 233
I + + NL YL L++N L ++ + +L +L +L L N +
Sbjct: 78 ------------FISSEAFVPVPNLRYLDLSSNHL-HTLDEFLFSDLQALEVLLLYNNHI 124
Query: 234 RGSIP-FSLANLSNLGILYLYKNSLFGFIPSVIGN---LKSLFELDLSENQLFGSIPLSF 289
+ + +++ L LYL +N + F +I + L L LDLS N+L
Sbjct: 125 V-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDL 183
Query: 290 SNLSSLTLMS--LFNNSL 305
L + L NN L
Sbjct: 184 QKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 2e-14
Identities = 41/180 (22%), Positives = 60/180 (33%), Gaps = 27/180 (15%)
Query: 273 ELDLSENQLFGSIP--LSFSNLSSLTLMSLFNNSLSGSIPP-TQGNLEALSELGLYINQL 329
LDLS N L + + + L++L + L +N L+ I + L L L N L
Sbjct: 43 LLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHL 100
Query: 330 DGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLT 389
+ +L +L L LY+N + N + L KL L +N +S I +
Sbjct: 101 HTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGN 160
Query: 390 KLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLS-QNN 448
KL L L + N L P L NN
Sbjct: 161 KL---------------------PKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 2e-13
Identities = 39/165 (23%), Positives = 58/165 (35%), Gaps = 31/165 (18%)
Query: 94 DFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLR 152
+++ + +L L LS N L I + + LR LDL +N L + L L
Sbjct: 57 EWTPTRLTNLHSLLLSHNHL-NFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALE 115
Query: 153 MLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGS 212
+L NH+ + N F ++ L LYL+ N +
Sbjct: 116 VLLLYNNHIV-VVD---------------RNAFED--------MAQLQKLYLSQNQIS-R 150
Query: 213 IPN----VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253
P L L +LDLS N+L+ L L LY
Sbjct: 151 FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLY 195
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 3e-12
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Query: 321 ELGLYINQLDGVIPPSI--GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L L N L + L++L +L L N + + +L L+L NHL
Sbjct: 43 LLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLH 101
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDH-- 436
+ +L L ++ + NH+ + +F ++ L++L +QN + E D
Sbjct: 102 TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNK 161
Query: 437 -PNLTFLDLSQNNL 449
P L LDLS N L
Sbjct: 162 LPKLMLLDLSSNKL 175
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 5e-09
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 536 QYLDLSANKLSSSIPKSMGNLSK-LHYLNLSNNQFNHKIPTE--FEKLIHLSELDLSHNF 592
L S +L + +P+ +L L+LS+N ++ E +L +L L LSHN
Sbjct: 21 NILSCSKQQLPN-VPQ---SLPSYTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNH 75
Query: 593 LQGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAF 651
L I + + +L L+LS N+L L F ++++L + + N + + + AF
Sbjct: 76 LN-FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVV-VDRN-AF 132
Query: 652 KD 653
+D
Sbjct: 133 ED 134
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 16/125 (12%)
Query: 69 GIFCNLVGRVISISLSSLGLNG----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SN 123
F + +L L L+ T +F FS L L L N + + +
Sbjct: 82 EAFVPVP------NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHI-VVVDRNAFED 134
Query: 124 LSKLRALDLGNNQLSGVIP---QEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180
+++L+ L L NQ+S ++ L L +L N L ++ KL L
Sbjct: 135 MAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGL 194
Query: 181 C-HNN 184
HNN
Sbjct: 195 YLHNN 199
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 9e-24
Identities = 68/286 (23%), Positives = 113/286 (39%), Gaps = 47/286 (16%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G G G VY+ ++ PS + AVK + D FL E L +++ H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD---FLMEALIISKFNHQN 94
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK----DDAAAKEFGWNQRMNVIKGVANALS 876
I++ G + FI+ E + G L + L+ + ++V + +A
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 877 YL--HHDCLPPIVHGDISSKNVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGY 931
YL +H +H DI+++N LL V DFG+A+ + + +++ G
Sbjct: 155 YLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYR-KGGCAM 206
Query: 932 -----AAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQN 985
PE T K D SFGVL E+ G P + S SN E+ +
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQ--EVLEF 257
Query: 986 LD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ R+ P ++ + IM C PE RP + +
Sbjct: 258 VTSGGRMDPP-KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERI 299
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 33/269 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFN-SQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+GKG VY+A + +G+ A+K + + M + NEV +++H +I++
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR--VQNEVKIHCQLKHPSILEL 76
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ + ++ + ++V E G + LK K F N+ + + + + YLH
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYLK--NRVKPFSENEARHFMHQIITGMLYLHSHG-- 132
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
I+H D++ N+LL ++DFG+A L GT Y +PEIA
Sbjct: 133 -ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL 191
Query: 945 KYDVHSFGVLALEVIKGNHPRDYVSTNF--SSFSNMITEINQNLDHRLP----TPSRDVM 998
+ DV S G + ++ G P F + N + ++ D+ +P ++D++
Sbjct: 192 ESDVWSLGCMFYTLLIGRPP-------FDTDTVKNTLNKVVLA-DYEMPSFLSIEAKDLI 243
Query: 999 DKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+L L +P R ++ V +
Sbjct: 244 HQL----------LRRNPADRLSLSSVLD 262
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 68/286 (23%), Positives = 112/286 (39%), Gaps = 47/286 (16%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G G G VY+ ++ PS + AVK + D FL E L +++ H+N
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD---FLMEALIISKFNHQN 135
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK----DDAAAKEFGWNQRMNVIKGVANALS 876
I++ G + FI+ E + G L + L+ + ++V + +A
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 877 YL--HHDCLPPIVHGDISSKNVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGY 931
YL +H +H DI+++N LL V DFG+A+ + + + + G
Sbjct: 196 YLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRAGYYR-KGGCAM 247
Query: 932 -----AAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQN 985
PE T K D SFGVL E+ G P + S SN E+ +
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQ--EVLEF 298
Query: 986 LD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ R+ P ++ + IM C PE RP + +
Sbjct: 299 VTSGGRMDPP-KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERI 340
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 38/278 (13%)
Query: 762 GEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFN-SQLLFDEMADQDEFLNEVLALTE 815
+Y GKG ++ + + +FA K S LL ++ E+
Sbjct: 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK--MSMEISIHRS 71
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------DDAAAKEFGWNQRMNVIK 869
+ H++++ FHGF + F+V E R SL + K + A +
Sbjct: 72 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL---------R 122
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
+ YLH + ++H D+ N+ L+ + E + DFG+A + GT
Sbjct: 123 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP 179
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
Y APE+ + + DV S G + ++ G P + ++ I + ++
Sbjct: 180 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKH 237
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ + ++ K+ L P ARPT+ ++ N
Sbjct: 238 INPVAASLIQKM----------LQTDPTARPTINELLN 265
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-23
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 748 KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF 806
++ + +GKG G V K + + +AVK N ++ D
Sbjct: 13 NLYFQGTFAERYNIVCM--LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTI 68
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------DDAAAKEF 859
L EV L ++ H NI+K ++ +IV E G L I+K DAA
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---- 124
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLN 916
+IK V + ++Y+H IVH D+ +N+LL+S+ + + DFG++
Sbjct: 125 ------RIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGV 953
++ GT Y APE+ EK DV S GV
Sbjct: 176 Q-NTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGV 210
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 2e-23
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+ +G GR G V+K E +G+ A K ++ M D++E NE+ + ++ H
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR----GMKDKEEVKNEISVMNQLDH 145
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR--MNVIKGVANALS 876
N+I+ + + +V EY+D G L D + + + + +K + +
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGELF----DRIIDESYNLTELDTILFMKQICEGIR 201
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
++H I+H D+ +N+L + + DFG+A+ P F GT + AP
Sbjct: 202 HMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAP 257
Query: 935 EIAHMMRATEKYDVHSFGVLA 955
E+ + + D+ S GV+A
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIA 278
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-23
Identities = 60/281 (21%), Positives = 106/281 (37%), Gaps = 44/281 (15%)
Query: 762 GEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFN-SQLLFDEMADQDEFLNEVLALTE 815
+Y GKG ++ + + +FA K S LL ++ E+
Sbjct: 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK--MSMEISIHRS 97
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------DDAAAKEFGWNQRMNVIK 869
+ H++++ FHGF + F+V E R SL + K + A +
Sbjct: 98 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL---------R 148
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
+ YLH + ++H D+ N+ L+ + E + DFG+A + GT
Sbjct: 149 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP 205
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF--SSFSNMITEINQNLD 987
Y APE+ + + DV S G + ++ G P F S I +N +
Sbjct: 206 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP-------FETSCLKETYLRIKKN-E 257
Query: 988 HRLPT-PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ +P + + + L P ARPT+ ++ N
Sbjct: 258 YSIPKHINPVAASLIQKM-------LQTDPTARPTINELLN 291
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G +V++ +G +FA+K FN+ D + E L ++ H+NI+K
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVDVQMREFEVLKKLNHKNIVKLF 73
Query: 826 GF--CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
+ +H ++ E+ GSL T+L++ + A ++ + V++ V +++L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 884 PPIVHGDISSKNVLLDSEHEAH----VSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI--- 936
IVH +I N++ + ++DFG A+ L + + GT Y P++
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED-DEQFVSLYGTEEYLHPDMYER 189
Query: 937 -AHMMRATEKY----DVHSFGVLALEVIKGNHP 964
+KY D+ S GV G+ P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 3e-23
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 39/213 (18%)
Query: 760 DFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
F + Y + GKG V + +G+ FA K N++ L D + E
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLEREARICR 60
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEY----------LDRGSLTTILKDDAAAKEFGWNQR 864
+++H NI++ H ++V + + R + + DA+
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS---EADAS--------- 108
Query: 865 MNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHE-AHV--SDFGIAKFLNPHSS 920
+ I+ + +++Y H + IVH ++ +N+LL S+ + A V +DFG+A +N S
Sbjct: 109 -HCIQQILESIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-SE 162
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGV 953
W FAGT GY +PE+ ++ D+ + GV
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 195
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 102 bits (254), Expect = 3e-23
Identities = 33/295 (11%), Positives = 69/295 (23%), Gaps = 50/295 (16%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+ G + V+ ++ FA+K F ++ + A + + +
Sbjct: 70 LRVGDRSVVFLVRDVERLEDFALKVFTMGAENSR-SELERLHEATFAAARLLGESPEEAR 128
Query: 826 GFC--------------------------SNAQHSFIVSEYL--DRGSLTTILKDDAAAK 857
+ ++ D L + L +
Sbjct: 129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFR 188
Query: 858 E-FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916
G + + + L +VHG + N+ + + + D
Sbjct: 189 GDEGILALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSALW--- 242
Query: 917 PHSSNWTAFAGTFGYAAPEI--AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS 974
+ A + YA E A T + G+ V P F
Sbjct: 243 KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP-------FGL 295
Query: 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVA---IL-CLVESPEARPTMKKV 1025
+ I + R+P + + I L R +
Sbjct: 296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEA 350
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 3e-23
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 752 EEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF 806
E ++ A F + Y +GKG V + +G+ FA K N++ L D +
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKL 75
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------DDAAAKEF 859
E +++H NI++ H ++V + + G L I+ DA+
Sbjct: 76 EREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---- 131
Query: 860 GWNQRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFL 915
+ I+ + +++Y H + IVH ++ +N+LL S+ + ++DFG+A +
Sbjct: 132 ------HCIQQILESIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
Query: 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGV 953
N S W FAGT GY +PE+ ++ D+ + GV
Sbjct: 182 ND-SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 218
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-23
Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 43/214 (20%)
Query: 759 DDFGEKYCIGK----GRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
D + + + G VY+ + + +A+K D+ E+ L
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT------VDKKIVRTEIGVL 102
Query: 814 TEIRHRNIIKFHGFCSNAQHSFIVSEY----------LDRGSLTTILKDDAAAKEFGWNQ 863
+ H NIIK +V E +++G + + DAA
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS---ERDAA-------- 151
Query: 864 RMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHE-AHV--SDFGIAKFLNPHS 919
+ +K + A++YLH + IVH D+ +N+L + A + +DFG++K +
Sbjct: 152 --DAVKQILEAVAYLHENG----IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH-Q 204
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGV 953
GT GY APEI + D+ S G+
Sbjct: 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGI 238
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 6e-23
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 41/279 (14%)
Query: 767 IGKGRQGSVYKAELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL--H 879
G C ++ S +V Y+ G L ++++ + VA + YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA------A 933
VH D++++N +LD + V+DFG+A+ + + + + G A
Sbjct: 148 K-----FVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLPVKWMA 200
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRL 990
E + T K DV SFGVL E++ +G P + + +I L RL
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-------YPDVNT--FDITVYLLQGRRL 251
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P D L +M + C E RP+ ++ + +
Sbjct: 252 LQP-EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRI 286
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 6e-23
Identities = 64/279 (22%), Positives = 106/279 (37%), Gaps = 41/279 (14%)
Query: 767 IGKGRQGSVYKAELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IGKG G VY E I A+K + + + + FL E L + + H N++
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR--ITEMQ-QVEAFLREGLLMRGLNHPNVL 85
Query: 823 KFHGFCSNAQ-HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL--H 879
G + ++ Y+ G L ++ + ++ VA + YL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG------YAA 933
VH D++++N +LD V+DFG+A+ + + + + A
Sbjct: 144 K-----FVHRDLAARNCMLDESFTVKVADFGLARDI--LDREYYSVQQHRHARLPVKWTA 196
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRL 990
E R T K DV SFGVL E++ +G P + ++ L RL
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPP-------YRHIDP--FDLTHFLAQGRRL 247
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P P D L +M+ C P RPT + + +
Sbjct: 248 PQP-EYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEV 282
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 8e-23
Identities = 76/283 (26%), Positives = 122/283 (43%), Gaps = 46/283 (16%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFN-SQLLFDEMADQDEFLNEVLALTE 815
IDDF +GKG+ G+VY A E + I A+K SQL + + Q E+ +
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ--LRREIEIQSH 70
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKG 870
+RH NI++ + + + + +++ E+ RG L L+ D+ + F ++
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--------MEE 122
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
+A+AL Y H ++H DI +N+L+ + E ++DFG + P T GT
Sbjct: 123 LADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSV-HAPSLRRRT-MCGTLD 177
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF--SSFSNMITEINQNLDH 988
Y PE+ EK D+ GVL E + G P F S + I N+D
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP-------FDSPSHTETHRRI-VNVDL 229
Query: 989 RLP----TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ P S+D++ KL L P R +K V
Sbjct: 230 KFPPFLSDGSKDLISKL----------LRYHPPQRLPLKGVME 262
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 98.8 bits (246), Expect = 1e-22
Identities = 46/268 (17%), Positives = 84/268 (31%), Gaps = 35/268 (13%)
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVY--EAFGDHPNLTFLDL 444
+L +L + ++ L+ L + G P+L L+L
Sbjct: 69 SLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNL 128
Query: 445 SQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ 504
+ ++ L L+VL ++ H + Q
Sbjct: 129 RNVSWATRDAWLAELQQWLKP--------------------GLKVLSIAQAHSLNFSCEQ 168
Query: 505 FEKLFSLNKLILNLNQLSGGVPLE----FGSLTELQYLDLSANKLSS---SIPKSMGNLS 557
+L+ L L+ N G L LQ L L + +
Sbjct: 169 VRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228
Query: 558 KLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNN 616
+L L+LS+N + L+ L+LS L+ ++P + L L+LS+N
Sbjct: 229 QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL--PAKLSVLDLSYNR 285
Query: 617 LFDLIPGCFEEMRSLSRIDIAYNELQGP 644
L D P +E+ + + + N
Sbjct: 286 L-DRNPS-PDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 90.7 bits (225), Expect = 8e-20
Identities = 51/319 (15%), Positives = 82/319 (25%), Gaps = 32/319 (10%)
Query: 71 FCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRAL 130
CN S + L + L I L+ L
Sbjct: 14 SCNFSDPKPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRL 73
Query: 131 DLGNNQLSGVIPQEIGHL---TCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFS- 186
+ ++ I + + L+ L + + G+ P + + + ++ L N S
Sbjct: 74 TVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133
Query: 187 ---GRIPPSLGNLS--NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSL 241
L L L + + +LS LDLS N G
Sbjct: 134 ATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193
Query: 242 ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301
A P L+ L + G + L + L
Sbjct: 194 A-----------------LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLS 236
Query: 302 NNSLSGSIPP-TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360
+NSL + + L+ L L L V P + + L L L N
Sbjct: 237 HNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQV-PKGL--PAKLSVLDLSYNRLDRNPS-- 291
Query: 361 IGYLKSLSKLELCRNHLSG 379
L + L L N
Sbjct: 292 PDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 89.2 bits (221), Expect = 3e-19
Identities = 56/297 (18%), Positives = 88/297 (29%), Gaps = 36/297 (12%)
Query: 239 FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIP---LSFSNLSSL 295
S +L + I SL L + ++ I L +S L
Sbjct: 38 LYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGL 97
Query: 296 TLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN------LSSLRTLYLY 349
++L N ++G+ PP L + + + L+ L +
Sbjct: 98 QELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIA 157
Query: 350 DNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409
++ +LS L+L N G L P F
Sbjct: 158 QAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI-----------------SALCPLKF 200
Query: 410 RNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG---EISFNWRNFPKLGTF 466
L L G L LDLS N+L S +W +L +
Sbjct: 201 PTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW--PSQLNSL 258
Query: 467 NASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSG 523
N S + +P + +KL VLDLS N + P ++L + L L N
Sbjct: 259 NLSFTGLK-QVPKGL--PAKLSVLDLSYNRLDR-NP-SPDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 3e-19
Identities = 56/265 (21%), Positives = 83/265 (31%), Gaps = 23/265 (8%)
Query: 60 TKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPP 119
T+ + I +L + +++ + + F L L L + G PP
Sbjct: 54 TEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113
Query: 120 QISNLS--KLRALDLGNNQLSGVIPQEIGHL-----TCLRMLYFDVNHLHGSIPLEIGKL 172
+ + L L+L N + + L L++L H ++
Sbjct: 114 PLLEATGPDLNILNLRNVSWAT-RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172
Query: 173 SLINVLTLCHNNFSGRIPPS----LGNLSNLAYLYLNNN---SLFGSIPNVMGNLNSLSI 225
++ L L N G L L L N + G + L
Sbjct: 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQG 232
Query: 226 LDLSQNQLRGSIPFSL-ANLSNLGILYLYKNSLFGFIPSVIGNL-KSLFELDLSENQLFG 283
LDLS N LR + S L L L L V L L LDLS N+L
Sbjct: 233 LDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL----KQVPKGLPAKLSVLDLSYNRL-D 287
Query: 284 SIPLSFSNLSSLTLMSLFNNSLSGS 308
P S L + +SL N S
Sbjct: 288 RNP-SPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 5e-10
Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 9/150 (6%)
Query: 514 LILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM---GNLSKLHYLNLSNNQFN 570
L + G + L+ L + A ++ S I +S L L L N +
Sbjct: 49 LKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT 108
Query: 571 HKIPTEFEKLIH--LSELDLSHNFLQGEIPP----QICNMESLEELNLSHNNLFDLIPGC 624
P + L+ L+L + Q L+ L+++ + +
Sbjct: 109 GTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ 168
Query: 625 FEEMRSLSRIDIAYNELQGPIPNSTAFKDG 654
+LS +D++ N G +A
Sbjct: 169 VRVFPALSTLDLSDNPELGERGLISALCPL 198
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 1e-22
Identities = 70/300 (23%), Positives = 122/300 (40%), Gaps = 70/300 (23%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V+ AE ++ AVK +A + +F E LT ++H +
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD----PTLAARKDFQREAELLTNLQHEH 78
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWNQRMNV 867
I+KF+G C + +V EY+ G L L+ A E G +Q +++
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 868 IKGVANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN---- 921
+A+ + YL H VH D++++N L+ + + DFG+++ + +S++
Sbjct: 139 ASQIASGMVYLASQH-----FVHRDLATRNCLVGANLLVKIGDFGMSRDV--YSTDYYRV 191
Query: 922 ---------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTN 971
W PE + T + DV SFGV+ E+ G P
Sbjct: 192 GGHTMLPIRWM---------PPESIMYRKFTTESDVWSFGVILWEIFTYGKQP------- 235
Query: 972 FSSFSN--MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ SN +I I Q L P R ++ +M C P+ R +K++ +L
Sbjct: 236 WFQLSNTEVIECITQG--RVLERP-RVCPKEVYDVML---GCWQREPQQRLNIKEIYKIL 289
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 2e-22
Identities = 70/336 (20%), Positives = 122/336 (36%), Gaps = 57/336 (16%)
Query: 717 SQEKRRTFFGPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVY 776
+ + A D + L + + I F E IG+G G VY
Sbjct: 49 KKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEV--IGRGHFGCVY 106
Query: 777 KAELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832
L I AVK N ++ + +FL E + + + H N++ G C ++
Sbjct: 107 HGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 163
Query: 833 HS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL--HHDCLPPIVHG 889
S +V Y+ G L ++++ + VA + +L VH
Sbjct: 164 GSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKK-----FVHR 216
Query: 890 DISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-------------WTAFAGTFGYAAPEI 936
D++++N +LD + V+DFG+A+ + + W A E
Sbjct: 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM---------ALES 267
Query: 937 AHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSN--MITEINQNLDHRLPTP 993
+ T K DV SFGVL E++ +G P + + + + Q RL P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPP-------YPDVNTFDITVYLLQ--GRRLLQP 318
Query: 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D L +M + C E RP+ ++ + +
Sbjct: 319 -EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRI 350
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 99.3 bits (247), Expect = 2e-22
Identities = 38/275 (13%), Positives = 77/275 (28%), Gaps = 38/275 (13%)
Query: 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAE------LPSGIIFAVKKFNSQLLFDEMADQDE 805
E + +G+G VY+A + F +K ++
Sbjct: 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWE----FYI 113
Query: 806 FLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD--DAAAKEFGWNQ 863
+ L +KF+ S +V E G+L + + K
Sbjct: 114 GTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGL 173
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH-----------VSDFGIA 912
++ + + +H I+HGDI N +L + + D G +
Sbjct: 174 VISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQS 230
Query: 913 KFLN--PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVST 970
+ P + +TA T G+ E+ + D ++ G +
Sbjct: 231 IDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM------ 284
Query: 971 NFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
+ P D+ ++ +M
Sbjct: 285 -KVKNEGGECKPEGLFR---RLPHLDMWNEFFHVM 315
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-22
Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 32/226 (14%)
Query: 754 IIKAIDDFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLN 808
I E Y G G G V + + + A+K + + L
Sbjct: 28 ITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS--SNSKLLE 85
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------DDAAAKEFGW 861
EV L + H NI+K + F + ++ ++V E G L I+ DAA
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA------ 139
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPH 918
+IK V + ++YLH IVH D+ +N+LL+S+ + + DFG++
Sbjct: 140 ----VIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN- 191
Query: 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
GT Y APE+ + EK DV S GV+ ++ G P
Sbjct: 192 QKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPP 236
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 3e-22
Identities = 70/299 (23%), Positives = 118/299 (39%), Gaps = 69/299 (23%)
Query: 767 IGKGRQGSVYKAELPSG------IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V+ AE + ++ AVK + + +F E LT ++H++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE----ASESARQDFQREAELLTMLQHQH 104
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------------DDAAAKEFGWNQRMNVI 868
I++F G C+ + +V EY+ G L L+ +D A G Q + V
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 869 KGVANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN----- 921
VA + YL H VH D++++N L+ + DFG+++ + +S++
Sbjct: 165 SQVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSRDI--YSTDYYRVG 217
Query: 922 --------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNF 972
W PE + T + DV SFGV+ E+ G P +
Sbjct: 218 GRTMLPIRWM---------PPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-------W 261
Query: 973 SSFSNMITEINQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
SN E + L P R ++ +IM C P+ R ++K V L
Sbjct: 262 YQLSNT--EAIDCITQGRELERP-RACPPEVYAIMR---GCWQREPQQRHSIKDVHARL 314
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 3e-22
Identities = 30/159 (18%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANK 544
+ L + L++ ++ E ++ L +N + P+ L+ L+ L +
Sbjct: 44 NSLTYITLANINVTDLTG--IEYAHNIKDLTINNIHATNYNPIS--GLSNLERLRIMGKD 99
Query: 545 LSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNM 604
++S ++ L+ L L++S++ + I T+ L ++ +DLS+N +I P + +
Sbjct: 100 VTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP-LKTL 158
Query: 605 ESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643
L+ LN+ + + D E+ L+++ + G
Sbjct: 159 PELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 1e-21
Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 10/186 (5%)
Query: 122 SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181
S LG + + + ++ LT + + +V L G I I LT+
Sbjct: 20 STFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTG-----IEYAHNIKDLTIN 74
Query: 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSL 241
+ + + P + LSNL L + + + L SL++LD+S + SI +
Sbjct: 75 NIHATN-YNP-ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKI 132
Query: 242 ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301
L + + L N I + L L L++ + + + + L + F
Sbjct: 133 NTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRGI--EDFPKLNQLYAF 189
Query: 302 NNSLSG 307
+ ++ G
Sbjct: 190 SQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 4e-21
Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 7/160 (4%)
Query: 192 SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILY 251
+ +++L Y+ L N ++ + + +++ L ++ P ++ LSNL L
Sbjct: 39 TEAQMNSLTYITLANINV-TDLTG-IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLR 94
Query: 252 LYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPP 311
+ + + L SL LD+S + SI + L + + L N I P
Sbjct: 95 IMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154
Query: 312 TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
L L L + + + I + L LY +
Sbjct: 155 L-KTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 2e-19
Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 10/183 (5%)
Query: 438 NLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI 497
L Q++ I+ L + N+ + I + ++ L +++ H
Sbjct: 24 AYLNGLLGQSST-ANITEA--QMNSLTYITLANINV-TDLTG-IEYAHNIKDLTINNIHA 78
Query: 498 VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLS 557
P L +L +L + ++ LT L LD+S + SI + L
Sbjct: 79 TNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLP 136
Query: 558 KLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNL 617
K++ ++LS N I + L L L++ + + I + L +L +
Sbjct: 137 KVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTI 193
Query: 618 FDL 620
Sbjct: 194 GGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 5e-19
Identities = 35/183 (19%), Positives = 63/183 (34%), Gaps = 10/183 (5%)
Query: 315 NLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCR 374
+A L + + + ++SL + L + L I Y ++ L +
Sbjct: 21 TFKAYLNGLLGQSSTANI---TEAQMNSLTYITLANINVTDLTG--IEYAHNIKDLTINN 75
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFG 434
H + P I L+ L + + + + LTSL L + + +
Sbjct: 76 IHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN 133
Query: 435 DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
P + +DLS N +I + P+L + N + + I D KL L S
Sbjct: 134 TLPKVNSIDLSYNGAITDIMPL-KTLPELKSLNIQFDGV-HDYRG-IEDFPKLNQLYAFS 190
Query: 495 NHI 497
I
Sbjct: 191 QTI 193
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 4e-16
Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 10/184 (5%)
Query: 364 LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
K+ L ++ + + + +LT + L N+ L G+ +++ L N
Sbjct: 22 FKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGI-----EYAHNIKDLTINNI 76
Query: 424 NLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGD 483
+ Y NL L + ++ + N L + S + SI +I
Sbjct: 77 HA--TNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT 134
Query: 484 SSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543
K+ +DLS N + I + L L L + + + +E +L L +
Sbjct: 135 LPKVNSIDLSYNGAITDIMP-LKTLPELKSLNIQFDGVHDYRGIE--DFPKLNQLYAFSQ 191
Query: 544 KLSS 547
+
Sbjct: 192 TIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-15
Identities = 25/187 (13%), Positives = 62/187 (33%), Gaps = 10/187 (5%)
Query: 239 FSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLM 298
+ L ++S + SL + L+ + + ++ +
Sbjct: 17 IPDSTFKAYLNGLLGQSST---ANITEAQMNSLTYITLANINVTDLTGIE--YAHNIKDL 71
Query: 299 SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP 358
++ N + + P L L L + + P++ L+SL L + + +
Sbjct: 72 TINNIHAT-NYNPI-SGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSIL 129
Query: 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418
+I L ++ ++L N I + L +L +N+ + + + L +L
Sbjct: 130 TKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQL 186
Query: 419 RFNQNNL 425
+
Sbjct: 187 YAFSQTI 193
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 1e-12
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 82 SLSSLGLNGT-FQDFS-FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSG 139
++ L +N +++ S +L L + + + P +S L+ L LD+ ++
Sbjct: 67 NIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDD 126
Query: 140 VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNL 199
I +I L + + N I + L + L + + + + L
Sbjct: 127 SILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YRG-IEDFPKL 183
Query: 200 AYLYLNNN 207
LY +
Sbjct: 184 NQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 6e-08
Identities = 18/118 (15%), Positives = 43/118 (36%), Gaps = 7/118 (5%)
Query: 531 SLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
+ L + + + ++ L Y+ L+N T E ++ +L +++
Sbjct: 21 TFKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVTD--LTGIEYAHNIKDLTINN 75
Query: 591 NFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS 648
P I + +LE L + ++ + SL+ +DI+++ I
Sbjct: 76 IHAT-NYNP-ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTK 131
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 98.8 bits (246), Expect = 4e-22
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G +V++ +G +FA+K FN+ D + E L ++ H+NI+K
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVDVQMREFEVLKKLNHKNIVKLF 73
Query: 826 GF--CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
+ +H ++ E+ GSL T+L++ + A ++ + V++ V +++L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 884 PPIVHGDISSKNVLLDSEHEAH----VSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI--- 936
IVH +I N++ + ++DFG A+ L + + GT Y P++
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED-DEQFVSLYGTEEYLHPDMYER 189
Query: 937 -AHMMRATEKY----DVHSFGVLALEVIKGNHP 964
+KY D+ S GV G+ P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 5e-22
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALTEI 816
+ GE+ +G G+ V K + +G +A K + L ++E EV L EI
Sbjct: 8 EMGEE--LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL----------DRGSLTTILKDDAAAKEFGWNQRMN 866
RH NII H N ++ E + ++ SLT +D+A
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT---EDEAT----------Q 112
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH----VSDFGIAKFLNPHSSNW 922
+K + + + YLH I H D+ +N++L ++ + + DFGIA + + +
Sbjct: 113 FLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GNEF 168
Query: 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955
GT + APEI + + D+ S GV+
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 5e-22
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 24/206 (11%)
Query: 760 DFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+ EKY I G+G G V++ E S + K + DQ E+ L
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILN 56
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR--MNVIKGVA 872
RHRNI+ H + + ++ E++ + + F N+R ++ + V
Sbjct: 57 IARHRNILHLHESFESMEELVMIFEFISGLDIF----ERINTSAFELNEREIVSYVHQVC 112
Query: 873 NALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNWTAFAGTF 929
AL +LH H+ I H DI +N++ + + + +FG A+ L P + F
Sbjct: 113 EALQFLHSHN----IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF-TAP 167
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLA 955
Y APE+ + D+ S G L
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLV 193
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 7e-22
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 38/218 (17%)
Query: 759 DDFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLL--FDEMADQDEFLNEVL 811
+ Y I G G+ V K E +G+ +A K + ++E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYL----------DRGSLTTILKDDAAAKEFGW 861
L ++ H NII H N ++ E + + SL+ +++A
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS---EEEAT------ 118
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH----VSDFGIAKFLNP 917
+ IK + + ++YLH I H D+ +N++L ++ + DFG+A +
Sbjct: 119 ----SFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955
+ GT + APEI + + D+ S GV+
Sbjct: 172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 8e-22
Identities = 45/214 (21%), Positives = 78/214 (36%), Gaps = 42/214 (19%)
Query: 759 DDFGEKYCIGK----GRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
D + Y + G G V A + + I A KK + D D F E+ +
Sbjct: 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY----FVEDVDRFKQEIEIM 60
Query: 814 TEIRHRNIIKFHGFCSNAQHSFIVSEY----------LDRGSLTTILKDDAAAKEFGWNQ 863
+ H NII+ + + ++V E + + + DAA
Sbjct: 61 KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR---ESDAA-------- 109
Query: 864 RMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPHS 919
++K V +A++Y H + + H D+ +N L ++ + DFG+A P
Sbjct: 110 --RIMKDVLSAVAYCHKLN----VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP-G 162
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGV 953
GT Y +P++ + D S GV
Sbjct: 163 KMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGV 195
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 9e-22
Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 22/232 (9%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
+ + + + + + + ++ I L + L L N+L+ + P + +L L L+
Sbjct: 41 TQNELNSIDQIIANNSDI-KSVQG-IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF 96
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN 215
D N + L+ L + L+L HN S I L +L L LYL NN + +
Sbjct: 97 LDENKVKDLSSLK--DLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKI--TDIT 150
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
V+ L L L L NQ+ I LA L+ L LYL KN + + LK+L L+
Sbjct: 151 VLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLE 206
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYIN 327
L + SNL + + SL E +S+ G Y
Sbjct: 207 LFSQECLNKPINHQSNLVVPNTVKNTDGSLV--------TPEIISDDGDYEK 250
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 3e-21
Identities = 56/252 (22%), Positives = 96/252 (38%), Gaps = 18/252 (7%)
Query: 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180
++ +L ++ + Q L + + + + + S+ I L + L L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFL 75
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
N + I P L NL NL +L+L+ N + + ++ +L L L L N + I
Sbjct: 76 NGNKLT-DIKP-LANLKNLGWLFLDENKV-KDLSSL-KDLKKLKSLSLEHNGIS-DIN-G 129
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSL 300
L +L L LYL N + +V+ L L L L +NQ+ I + L+ L + L
Sbjct: 130 LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYL 185
Query: 301 FNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360
N +S + L+ L L L+ + NL T+ D + P
Sbjct: 186 SKNHIS-DLRALA-GLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL--VTPEI 241
Query: 361 IGYLKSLSKLEL 372
I K +
Sbjct: 242 ISDDGDYEKPNV 253
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 3e-21
Identities = 43/260 (16%), Positives = 92/260 (35%), Gaps = 21/260 (8%)
Query: 389 TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNN 448
++ + V +F + + ++ + ++ + + ++
Sbjct: 5 SETITVPTPIKQIFSD-----DAFAETIKDNLKKKSV--TDAVTQNELNSIDQIIANNSD 57
Query: 449 LYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKL 508
+ + + P + + N + I P + + L L L N + + + L
Sbjct: 58 I-KSVQ-GIQYLPNVTKLFLNGNKL-TDIKP-LANLKNLGWLFLDENKVK-DLSS-LKDL 111
Query: 509 FSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQ 568
L L L N +S L L +L+ L L NK++ + L+KL L+L +NQ
Sbjct: 112 KKLKSLSLEHNGISDINGLV--HLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQ 167
Query: 569 FNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEM 628
+ +P L L L LS N + ++ + +++L+ L L + +
Sbjct: 168 ISDIVP--LAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNL 223
Query: 629 RSLSRIDIAYNELQGPIPNS 648
+ + L P S
Sbjct: 224 VVPNTVKNTDGSLVTPEIIS 243
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-19
Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 18/254 (7%)
Query: 364 LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
K L + ++ + L + + + + + + + L ++ +L N N
Sbjct: 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGN 78
Query: 424 NLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGD 483
L + + NL +L L +N + ++S + ++ KL + + N I I +
Sbjct: 79 KL--TDIKPLANLKNLGWLFLDENKV-KDLS-SLKDLKKLKSLSLEHNGI-SDING-LVH 132
Query: 484 SSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543
+L+ L L +N I I V +L L+ L L NQ+S VPL LT+LQ L LS N
Sbjct: 133 LPQLESLYLGNNKIT-DITV-LSRLTKLDTLSLEDNQISDIVPLA--GLTKLQNLYLSKN 188
Query: 544 KLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICN 603
+S +++ L L L L + + +K L+ + + + L P I +
Sbjct: 189 HISD--LRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT--PEIISD 244
Query: 604 MESLEELNLSHNNL 617
E+ N+ +
Sbjct: 245 DGDYEKPNVKWHLP 258
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 4e-13
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 12/185 (6%)
Query: 95 FSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRML 154
++ +L +L L N + ++ + +L KL++L L +N +S + + HL L L
Sbjct: 84 KPLANLKNLGWLFLDENKV-KDLSS-LKDLKKLKSLSLEHNGISDING--LVHLPQLESL 139
Query: 155 YFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP 214
Y N + L +L+ ++ L+L N S I P L L+ L LYL+ N + +
Sbjct: 140 YLGNNKITDITVLS--RLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLSKNHI-SDLR 194
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
+ L +L +L+L + +NL + SL P +I + +
Sbjct: 195 AL-AGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT--PEIISDDGDYEKP 251
Query: 275 DLSEN 279
++ +
Sbjct: 252 NVKWH 256
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 9e-22
Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 44/225 (19%)
Query: 756 KAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVK-----KFNSQLLFDEMADQDE 805
+ F E Y +G+G V + P+ +AVK S + ++
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 806 FLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEY----------LDRGSLTTILKDDA 854
L EV L ++ H NII+ F+V + ++ +L+ + +
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS---EKET 126
Query: 855 AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914
+++ + + LH IVH D+ +N+LLD + ++DFG +
Sbjct: 127 R----------KIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 915 LNPHSSNWTAFAGTFGYAAPEI--AHMMRATEKY----DVHSFGV 953
L+P GT Y APEI M Y D+ S GV
Sbjct: 174 LDP-GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 9e-22
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 40/219 (18%)
Query: 759 DDFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVL 811
++ + Y G G+ V K E +G+ +A K + +++ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYL----------DRGSLTTILKDDAAAKEFGW 861
L EI+H N+I H N ++ E + ++ SLT +++A
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT---EEEAT------ 117
Query: 862 NQRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAH----VSDFGIAKFLN 916
+K + N + YLH I H D+ +N++L + + DFG+A ++
Sbjct: 118 ----EFLKQILNGVYYLHSLQ----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955
+ + GT + APEI + + D+ S GV+
Sbjct: 170 F-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 97.2 bits (242), Expect = 1e-21
Identities = 48/278 (17%), Positives = 92/278 (33%), Gaps = 35/278 (12%)
Query: 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL 401
S R ++ +P+++ ++ +L L + + L + + +N +
Sbjct: 10 SNRVFLCQESKV-TEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66
Query: 402 FGLIPKS-FRNLTSLERLRFNQNNLFGKVY-EAFGDHPNLTFLDLSQNNLYGEISFNWRN 459
+I F NL L +R + N + EAF + PNL +L +S + ++
Sbjct: 67 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGI--------KH 118
Query: 460 FPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-FEKL-FSLNKLILN 517
P S + +LD+ N + I F L F L LN
Sbjct: 119 LPD-VHKI---------------HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLN 162
Query: 518 LNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEF 577
N + F + N L S L++S + +
Sbjct: 163 KNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL 222
Query: 578 EKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHN 615
E L L + ++P + + +L E +L++
Sbjct: 223 ENLKKLRARSTYNLK---KLPT-LEKLVALMEASLTYP 256
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 94.5 bits (235), Expect = 6e-21
Identities = 43/270 (15%), Positives = 76/270 (28%), Gaps = 32/270 (11%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
C + IP L N L L L +++SQN + I
Sbjct: 16 CQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73
Query: 241 -LANLSNLGILYLYK-NSLFGFIPSVIGNLKSLFELDLSENQLFGSIP-LSFSNLSSLTL 297
+NL L + + K N+L P NL +L L +S + +P + + L
Sbjct: 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGI-KHLPDVHKIHSLQKVL 132
Query: 298 MSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV 357
+ + +N +I N G+ L+L NG +
Sbjct: 133 LDIQDNINIHTIER---------------NSFVGL-------SFESVILWLNKNGIQEIH 170
Query: 358 PNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLER 417
+ + N+L + + V++++ + L NL L
Sbjct: 171 NSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRA 230
Query: 418 LRFNQNNLFGKVYEAFGDHPNLTFLDLSQN 447
L L+
Sbjct: 231 RSTYNLKKLP----TLEKLVALMEASLTYP 256
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 3e-20
Identities = 53/239 (22%), Positives = 89/239 (37%), Gaps = 16/239 (6%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLI 175
IP + L +L + L + N + I ++ L +
Sbjct: 24 IPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKL 81
Query: 176 NVLTLCHNNFSGRIPPS-LGNLSNLAYLYLNNNSLFGSIPNVM-GNLNSLSILDLSQNQL 233
+ + + N I P NL NL YL ++N + +P+V + +LD+ N
Sbjct: 82 HEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGI-KHLPDVHKIHSLQKVLLDIQDNIN 140
Query: 234 RGSIP-FSLANLS-NLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIP-LSFS 290
+I S LS IL+L KN + I + N L EL+LS+N +P F
Sbjct: 141 IHTIERNSFVGLSFESVILWLNKNGI-QEIHNSAFNGTQLDELNLSDNNNLEELPNDVFH 199
Query: 291 NLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYL 348
S ++ + + S+P NL+ L Y + P++ L +L L
Sbjct: 200 GASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNLK----KLPTLEKLVALMEASL 253
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 3e-14
Identities = 40/239 (16%), Positives = 67/239 (28%), Gaps = 32/239 (13%)
Query: 69 GIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKL 127
G F G + I +S + + FS+ P L + + I P+ NL L
Sbjct: 48 GAFSGF-GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNL 106
Query: 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG 187
+ L + N + + H +L + N
Sbjct: 107 QYLLISNTGIKHLPDVHKIHSLQKVLLD------------------------IQDNINIH 142
Query: 188 RIPPSL--GNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLS 245
I + G L+LN N + + + N L S
Sbjct: 143 TIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGAS 202
Query: 246 NLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNS 304
IL + + + + NLK L + +P + L +L SL S
Sbjct: 203 GPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---KLP-TLEKLVALMEASLTYPS 257
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 1e-21
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 19/212 (8%)
Query: 749 FLYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFL 807
++ I + F K +G G G V+ E SG+ +K N ++
Sbjct: 14 LYFQGTIDDLFIFKRK--LGSGAFGDVHLVEERSSGLERVIKTINKDRS---QVPMEQIE 68
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMN 866
E+ L + H NIIK + + +IV E + G L I+ A K
Sbjct: 69 AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAE 128
Query: 867 VIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPHSSNW 922
++K + NAL+Y H +VH D+ +N+L + DFG+A+ +
Sbjct: 129 LMKQMMNALAYFHSQH----VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS-DEHS 183
Query: 923 TAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGV 953
T AGT Y APE+ R T K D+ S GV
Sbjct: 184 TNAAGTALYMAPEV--FKRDVTFKCDIWSAGV 213
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 1e-21
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 38/218 (17%)
Query: 759 DDFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVL 811
+ Y I G G+ V K E +G+ +A K + ++E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYL----------DRGSLTTILKDDAAAKEFGW 861
L ++ H N+I H N ++ E + + SL+ +++A
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS---EEEAT------ 118
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH----VSDFGIAKFLNP 917
+ IK + + ++YLH I H D+ +N++L ++ + DFG+A +
Sbjct: 119 ----SFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955
+ GT + APEI + + D+ S GV+
Sbjct: 172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 1e-21
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 748 KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF 806
++ + +GKG G V K + + +AVK N ++ D
Sbjct: 13 NLYFQGTFAERYNIVCM--LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTI 68
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------DDAAAKEF 859
L EV L ++ H NI+K ++ +IV E G L I+K DAA
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---- 124
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLN 916
+IK V + ++Y+H IVH D+ +N+LL+S+ + + DFG++
Sbjct: 125 ------RIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGV 953
++ GT Y APE+ EK DV S GV
Sbjct: 176 Q-NTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGV 210
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 99.8 bits (248), Expect = 1e-21
Identities = 57/292 (19%), Positives = 104/292 (35%), Gaps = 41/292 (14%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G V + +G A+K+ +L +++ + E+ + ++ H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELS---PKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 826 ------GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+ + EY + G L L ++ +++AL YLH
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
+ I+H D+ +N++L + + D G AK L+ T F GT Y APE+
Sbjct: 139 ENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ-GELCTEFVGTLQYLAPEL 194
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP------------------RDYVSTNFSSFSNM 978
+ T D SFG LA E I G P +++ +
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV 254
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030
+ L +++ + M L+ R T + N+ C
Sbjct: 255 KFSSVLPTPNHLSGILAGKLERWLQCM------LMWHQRQRGTDPQNPNVGC 300
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 1e-21
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 31/226 (13%)
Query: 754 IIKAIDDFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLN 808
+ + F ++Y GKG G V + +G AVK + + + + D++ L
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLR 75
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------DDAAAKEFGW 861
EV L ++ H NI+K + F + + ++V E G L I+ DAA
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------ 129
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPH 918
+I+ V + ++Y+H + IVH D+ +N+LL+S+ + + DFG++
Sbjct: 130 ----RIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA- 181
Query: 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
S GT Y APE+ H EK DV S GV+ ++ G P
Sbjct: 182 SKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP 226
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 1e-21
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 40/276 (14%)
Query: 767 IGKGRQGSVYKAELPSG----IIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
IG+G+ G V++ S + A+K K + + +++FL E L + + H +
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS-----DSVREKFLQEALTMRQFDHPH 452
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH- 879
I+K G + +I+ E G L + L+ + ++ AL+YL
Sbjct: 453 IVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES 509
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEI 936
VH DI+++NVL+ S + DFG+++++ S + + + APE
Sbjct: 510 KRF----VHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPES 563
Query: 937 AHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTP 993
+ R T DV FGV E++ G P F N ++ ++ RLP P
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKP-------FQGVKN--NDVIGRIENGERLPMP 614
Query: 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ L S+M C P RP ++ L
Sbjct: 615 -PNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 646
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 1e-21
Identities = 67/293 (22%), Positives = 111/293 (37%), Gaps = 61/293 (20%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G GSV + L + + AVK + +EFL+E + + H N+I
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR--EIEEFLSEAACMKDFSHPNVI 99
Query: 823 KFHGFCSNAQ-----HSFIVSEYLDRGSLTTIL---KDDAAAKEFGWNQRMNVIKGVANA 874
+ G C ++ ++ G L T L + + K + + +A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 875 LSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN----------- 921
+ YL + +H D++++N +L + V+DFG++K + +S +
Sbjct: 160 MEYLSNRN-----FLHRDLAARNCMLRDDMTVCVADFGLSKKI--YSGDYYRQGRIAKMP 212
Query: 922 --WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNM 978
W A E T K DV +FGV E+ +G P + N
Sbjct: 213 VKWI---------AIESLADRVYTSKSDVWAFGVTMWEIATRGMTP-------YPGVQNH 256
Query: 979 ITEINQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
E+ L HRL P D +D+L IM C P RPT + L
Sbjct: 257 --EMYDYLLHGHRLKQP-EDCLDELYEIMY---SCWRTDPLDRPTFSVLRLQL 303
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 1e-21
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 27/212 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQDEFL----NEVLALTEIRHR 819
+G G V+ A AVK +L ++A F E + H
Sbjct: 20 LGFGGMSEVHLARDLRD--HRDVAVK-----VLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 820 NIIKFH--GFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
I+ + G +IV EY+D +L I+ + + + VI AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQAL 129
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT---AFAGTFGYA 932
++ H + I+H D+ N+++ + + V DFGIA+ + ++ T A GT Y
Sbjct: 130 NFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+PE A + DV+S G + EV+ G P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 2e-21
Identities = 49/220 (22%), Positives = 77/220 (35%), Gaps = 43/220 (19%)
Query: 760 DFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLL----FDEMADQDEFLNEV 810
++Y + G G G V A E + A++ + + E E+
Sbjct: 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 191
Query: 811 LALTEIRHRNIIKFHGFCSNAQHSFIVSEY----------LDRGSLTTILKDDAAAKEFG 860
L ++ H IIK F + +IV E + L +
Sbjct: 192 EILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLK---EATCK----- 242
Query: 861 WNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNP 917
+ A+ YLH + I+H D+ +NVLL S+ E ++DFG +K L
Sbjct: 243 -----LYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 294
Query: 918 HSSNWTAFAGTFGYAAPEIAHMMRA---TEKYDVHSFGVL 954
S GT Y APE+ + D S GV+
Sbjct: 295 TSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 4e-21
Identities = 55/296 (18%), Positives = 116/296 (39%), Gaps = 63/296 (21%)
Query: 767 IGKGRQGSVYKAELPSGIIF------AVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G VY+ + A+K N E + FLNE + E +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE---FLNEASVMKEFNCHH 89
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVAN 873
+++ G S Q + ++ E + RG L + L+ ++ ++ + + +A+
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 874 ALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN---------- 921
++YL + VH D++++N ++ + + DFG+ + + + ++
Sbjct: 150 GMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLL 202
Query: 922 ---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSN 977
W +PE T DV SFGV+ E+ P + SN
Sbjct: 203 PVRWM---------SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-------YQGLSN 246
Query: 978 MITEINQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ + + L P + D L +M +C +P+ RP+ ++ + + +
Sbjct: 247 E--QVLRFVMEGGLLDKP-DNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKE 296
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 4e-21
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS---GGVPLEFGSL 532
+IP I + + LDL SN + F +L L L LN N+L G+ F L
Sbjct: 30 AIPSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGI---FKEL 84
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHN 591
L+ L ++ NKL + L L L L NQ +P F+ L L+ L L +N
Sbjct: 85 KNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQL-KSLPPRVFDSLTKLTYLSLGYN 143
Query: 592 FLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
LQ +P + + SL+EL L +N L + G F+++ L + + N+L+
Sbjct: 144 ELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 7e-21
Identities = 68/218 (31%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
IP I + + LDL +N+LS + + LT LR+LY + N L ++P
Sbjct: 31 IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLP---------- 77
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRG 235
F L NL L++ +N L ++P V L +L+ L L +NQL+
Sbjct: 78 -----AGIFKE--------LKNLETLWVTDNKL-QALPIGVFDQLVNLAELRLDRNQLK- 122
Query: 236 SIPFSL-ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLS 293
S+P + +L+ L L L N L V L SL EL L NQL +P F L+
Sbjct: 123 SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL-KRVPEGAFDKLT 181
Query: 294 SLTLMSLFNNSLSGSIPP-TQGNLEALSELGLYINQLD 330
L + L NN L +P +LE L L L N D
Sbjct: 182 ELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWD 218
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 1e-20
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 469 SMNNIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVP 526
N + S+P + +KL++L L+ N + +P F++L +L L + N+L +P
Sbjct: 45 QSNKL-SSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQA-LP 101
Query: 527 LE-FGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTE-FEKLIHL 583
+ F L L L L N+L S +P + +L+KL YL+L N+ +P F+KL L
Sbjct: 102 IGVFDQLVNLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGYNEL-QSLPKGVFDKLTSL 159
Query: 584 SELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639
EL L +N L+ +P + L+ L L +N L + G F+ + L + + N
Sbjct: 160 KELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 3e-20
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN 472
++L N L +AF L L L+ N L
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL----------------------- 73
Query: 473 IYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQ---LSGGVPL 527
++P I L+ L ++ N + +P+ F++L +L +L L+ NQ L V
Sbjct: 74 --QTLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRV-- 128
Query: 528 EFGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSE 585
F SLT+L YL L N+L S +PK + L+ L L L NNQ ++P F+KL L
Sbjct: 129 -FDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQL-KRVPEGAFDKLTELKT 185
Query: 586 LDLSHNFLQGEIPPQI-CNMESLEELNLSHN 615
L L +N L+ +P ++E L+ L L N
Sbjct: 186 LKLDNNQLK-RVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 7e-20
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 6/178 (3%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDG 331
+LDL N+L +F L+ L L+ L +N L ++P L+ L L + N+L
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ- 98
Query: 332 VIPPSI-GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI-GNLT 389
+P + L +L L L N L P L L+ L L N L +P + LT
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLT 157
Query: 390 KLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQN 447
L + + N L + +F LT L+ L+ + N L AF L L L +N
Sbjct: 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 9e-18
Identities = 64/204 (31%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 366 SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425
KL+L N LS + + LTKL L+ + +N L L F+ L +LE L N L
Sbjct: 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL 97
Query: 426 FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS- 484
F NL L L +N L S+PP + DS
Sbjct: 98 QALPIGVFDQLVNLAELRLDRNQL-------------------------KSLPPRVFDSL 132
Query: 485 SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543
+KL L L N + +P F+KL SL +L L NQL F LTEL+ L L N
Sbjct: 133 TKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191
Query: 544 KLSSSIPKSMGNLSKLHYLNLSNN 567
+L + +L KL L L N
Sbjct: 192 QLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 4e-17
Identities = 46/163 (28%), Positives = 68/163 (41%), Gaps = 8/163 (4%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
F L L L+ N L +P I L L L + +N+L + L L L
Sbjct: 57 FHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115
Query: 156 FDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGSI 213
D N L S+P + L+ + L+L +N +P + L++L L L NN L +
Sbjct: 116 LDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQL-KRV 172
Query: 214 P-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN 255
P L L L L NQL+ + +L L +L L +N
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 4e-21
Identities = 62/294 (21%), Positives = 113/294 (38%), Gaps = 62/294 (21%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+GKG GSV +A+L S + AVK + ++ D +EFL E + E H ++
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS--DIEEFLREAACMKEFDHPHVA 88
Query: 823 KFHGFCSNAQ------HSFIVSEYLDRGSLTTILKD---DAAAKEFGWNQRMNVIKGVAN 873
K G ++ ++ ++ G L L + + +A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 874 ALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN---------- 921
+ YL + +H D++++N +L + V+DFG+++ + +S +
Sbjct: 149 GMEYLSSRN-----FIHRDLAARNCMLAEDMTVCVADFGLSRKI--YSGDYYRQGCASKL 201
Query: 922 ---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSN 977
W A E T DV +FGV E++ +G P ++ N
Sbjct: 202 PVKWL---------ALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP-------YAGIEN 245
Query: 978 MITEINQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
EI L +RL P + M+++ +M C P+ RP+ + L
Sbjct: 246 A--EIYNYLIGGNRLKQP-PECMEEVYDLMY---QCWSADPKQRPSFTCLRMEL 293
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 5e-21
Identities = 59/226 (26%), Positives = 92/226 (40%), Gaps = 39/226 (17%)
Query: 754 IIKAIDDFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVK---------KFNSQLLFDE 799
+ K GE Y G G G V E A+K S +
Sbjct: 27 VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------D 852
+E NE+ L + H NIIK + ++ ++V+E+ + G L I+
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC 146
Query: 853 DAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDF 909
DAA N++K + + + YLH IVH DI +N+LL++++ + DF
Sbjct: 147 DAA----------NIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDF 193
Query: 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955
G++ F + GT Y APE+ + EK DV S GV+
Sbjct: 194 GLSSFFSK-DYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIM 237
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 5e-21
Identities = 51/225 (22%), Positives = 80/225 (35%), Gaps = 41/225 (18%)
Query: 750 LYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF----DEMADQD 804
+Y + ++ + +G G G V A E + A+K + + E
Sbjct: 3 VYPKALRDEYIMSKT--LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYL----------DRGSLTTILKDDA 854
E+ L ++ H IIK F + +IV E + L +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLK---EATC 116
Query: 855 AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGI 911
+ A+ YLH + I+H D+ +NVLL S+ E ++DFG
Sbjct: 117 K----------LYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 912 AKFLNPHSSNWTAFAGTFGYAAPEI-AHMMRA--TEKYDVHSFGV 953
+K L S GT Y APE+ + A D S GV
Sbjct: 164 SKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 207
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 7e-21
Identities = 65/302 (21%), Positives = 114/302 (37%), Gaps = 73/302 (24%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+ R G VYK L A+K K + E ++EF +E + ++H
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-----EGPLREEFRHEAMLRARLQH 71
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWNQRM 865
N++ G + Q ++ Y G L L D +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 866 NVIKGVANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-- 921
+++ +A + YL HH +VH D++++NVL+ + +SD G+ + + ++++
Sbjct: 132 HLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREV--YAADYY 184
Query: 922 -----------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVS 969
W APE + + D+ S+GV+ EV G P
Sbjct: 185 KLLGNSLLPIRWM---------APEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP----- 230
Query: 970 TNFSSFSNM--ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ +SN + I LP P D + ++M I C E P RP K + +
Sbjct: 231 --YCGYSNQDVVEMIRNR--QVLPCP-DDCPAWVYALM---IECWNEFPSRRPRFKDIHS 282
Query: 1028 LL 1029
L
Sbjct: 283 RL 284
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 94.5 bits (235), Expect = 7e-21
Identities = 55/253 (21%), Positives = 92/253 (36%), Gaps = 58/253 (22%)
Query: 756 KAIDDFGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFN-SQLLFDEMADQDEFLNE 809
++ + +KY + G+G G V A E + I A+K N +++ D + E
Sbjct: 19 GSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTE 78
Query: 810 VLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-----------TTILKDDAAAKE 858
V + ++ H NI + + + Q+ +V E G L T D +
Sbjct: 79 VRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 859 FGWNQRM--------------------------NVIKGVANALSYLHHDCLPPIVHGDIS 892
N+++ + +AL YLH+ I H DI
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIK 195
Query: 893 SKNVLLDSEHEAHV--SDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMMRATEKY 946
+N L + + DFG++K ++ T AGT + APE+ + E Y
Sbjct: 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN--ESY 253
Query: 947 ----DVHSFGVLA 955
D S GVL
Sbjct: 254 GPKCDAWSAGVLL 266
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 9e-21
Identities = 46/215 (21%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 754 IIKAIDDFGEKYCI-----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFL 807
+++++F Y + G+G+ V + +G +A K + + + E L
Sbjct: 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD--CRAEIL 76
Query: 808 NEVLALTEIRHR-NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGW---NQ 863
+E+ L + +I H N ++ EY G + + N
Sbjct: 77 HEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIF----SLCLPELAEMVSEND 132
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPHSS 920
+ +IK + + YLH + IVH D+ +N+LL S + + DFG+++ + +
Sbjct: 133 VIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH-AC 188
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLA 955
GT Y APEI + T D+ + G++A
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 1e-20
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 43/224 (19%)
Query: 756 KAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFN----SQLLFDEMADQDEF 806
A +F +KY IG+G V + +G FAVK ++
Sbjct: 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREAT 146
Query: 807 LNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEY----------LDRGSLTTILKDDAA 855
E L ++ H +II ++ F+V + ++ +L+ + +
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALS---EKETR 203
Query: 856 AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915
++++ + A+S+LH + IVH D+ +N+LLD + +SDFG + L
Sbjct: 204 ----------SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250
Query: 916 NPHSSNWTAFAGTFGYAAPEI--AHMMRATEKY----DVHSFGV 953
P GT GY APEI M Y D+ + GV
Sbjct: 251 EP-GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGV 293
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 1e-20
Identities = 32/258 (12%), Positives = 64/258 (24%), Gaps = 46/258 (17%)
Query: 766 CIGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
G ++A L A+ + Q + + E L+ L L+ I +
Sbjct: 38 FHGGVPPLQFWQALDTAL--DRQVALTFVDPQGVLPD-DVLQETLSRTLRLSRIDKPGVA 94
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ +V+E++ GSL + + + ++ +A A H
Sbjct: 95 RVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVG-----AIRAMQSLAAAADAAHRA- 148
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+ V VS G A
Sbjct: 149 --GVALSIDHPSRVR--------VSIDGDVV------------LAYPATMPD-------A 179
Query: 943 TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
+ D+ G ++ P + + ++ + P+ D
Sbjct: 180 NPQDDIRGIGASLYALLVNRWPLPEAGV-----RSGLAPAERDTAGQPIEPADIDRDIPF 234
Query: 1003 SIMEVAILCLVESPEARP 1020
I VA + R
Sbjct: 235 QISAVAARSVQGDGGIRS 252
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 2e-20
Identities = 41/287 (14%), Positives = 95/287 (33%), Gaps = 29/287 (10%)
Query: 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLA 812
+ + ++ G + K + I+ + L ++
Sbjct: 56 KALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPS-VKIRR 114
Query: 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ +N + S + +I + + +L + + ++ +++ +A
Sbjct: 115 MDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIA 174
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN------------PHSS 920
A+ +LH ++H D+ N+ + V DFG+ ++ P +
Sbjct: 175 EAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT 980
T GT Y +PE H + K D+ S G++ E++ + FS+ +
Sbjct: 232 THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YS-------FSTQMERVR 281
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
I + + P + +++ L SP RP +
Sbjct: 282 IITDVRNLKFPLLFTQKYPQEHMMVQ---DMLSPSPTERPEATDIIE 325
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 7e-20
Identities = 66/293 (22%), Positives = 115/293 (39%), Gaps = 60/293 (20%)
Query: 767 IGKGRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNII 822
IG+G G V KA + + A+K+ D+ D F E+ L ++ H NII
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD---FAGELEVLCKLGHHPNII 89
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWNQRMNVIK 869
G C + + ++ EY G+L L+ ++ A Q ++
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 870 GVANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN------ 921
VA + YL +H D++++N+L+ + A ++DFG+++ +
Sbjct: 150 DVARGMDYLSQKQ-----FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 922 --WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNM 978
W A E + T DV S+GVL E++ G P Y +
Sbjct: 205 VRWM---------AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--Y-----CGMTC- 247
Query: 979 ITEINQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
E+ + L +RL P + D++ +M C E P RP+ ++ L
Sbjct: 248 -AELYEKLPQGYRLEKP-LNCDDEVYDLM---RQCWREKPYERPSFAQILVSL 295
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 90.9 bits (225), Expect = 2e-19
Identities = 36/294 (12%), Positives = 80/294 (27%), Gaps = 59/294 (20%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-------- 817
+G+ + +A +G F V + EVL L +R
Sbjct: 86 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSN-AIKQMKEEVLRLRLLRGIKNQKQA 144
Query: 818 --------------HRNIIKFHGFCSNAQHSFIVSEYL-------DRGSLTTILKDDAAA 856
K + + +++S + + + +L ++
Sbjct: 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 204
Query: 857 KE-FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915
+ + R+ + V L+ LHH +VH + +++LD ++ F
Sbjct: 205 HKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRD 261
Query: 916 N-PHSSNWTAFAGTFGYAAPEIAHMMRATEKY-----DVHSFGVLALEVIKGNHPRDYVS 969
S A + + D + G+ + + P
Sbjct: 262 GASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP----- 316
Query: 970 TNFSSFSNM-ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTM 1022
+ + + +E +P P R +++ L E R
Sbjct: 317 --NTDDAALGGSEWIFRSCKNIPQPVRALLEGF----------LRYPKEDRLLP 358
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 3e-19
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 39/214 (18%)
Query: 760 DFGEKY-------CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVL 811
F + Y +G+G K S FAVK + ++ + E+
Sbjct: 5 PFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ-------KEIT 57
Query: 812 ALTEIR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------DDAAAKEFGWNQ 863
AL H NI+K H + H+F+V E L+ G L I K +A+
Sbjct: 58 ALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEAS-------- 109
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPHSS 920
+++ + +A+S++H +VH D+ +N+L E++ + DFG A+ P +
Sbjct: 110 --YIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
T YAAPE+ + E D+ S GV+
Sbjct: 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVI 198
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 3e-19
Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 72/303 (23%)
Query: 767 IGKGRQGSVYKAELP--------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-R 817
+G+G G V AE + AVK +++D ++E+ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG------- 870
H+NII G C+ +++ EY +G+L L+ V +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 871 ------VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN- 921
+A + YL +H D++++NVL+ + ++DFG+A+ + ++ +
Sbjct: 160 VSCTYQLARGMEYLASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY 212
Query: 922 ------------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYV 968
W APE T + DV SFGVL E+ G P
Sbjct: 213 YKKTTNGRLPVKWM---------APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP---- 259
Query: 969 STNFSSFSNMITEINQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVC 1026
+ E+ + L HR+ P + ++L +M C P RPT K++
Sbjct: 260 ---YPGIPVE--ELFKLLKEGHRMDKP-ANCTNELYMMMR---DCWHAVPSQRPTFKQLV 310
Query: 1027 NLL 1029
L
Sbjct: 311 EDL 313
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 5e-19
Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 72/303 (23%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-R 817
+G+G G V AE + AVK +++D ++E+ + I +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 145
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG------- 870
H+NII G C+ +++ EY +G+L L+ V +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 871 ------VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN- 921
+A + YL +H D++++NVL+ + ++DFG+A+ + ++ +
Sbjct: 206 VSCTYQLARGMEYLASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY 258
Query: 922 ------------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYV 968
W APE T + DV SFGVL E+ G P
Sbjct: 259 YKKTTNGRLPVKWM---------APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP---- 305
Query: 969 STNFSSFSNMITEINQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVC 1026
+ E+ + L HR+ P + ++L +M C P RPT K++
Sbjct: 306 ---YPGIPVE--ELFKLLKEGHRMDKP-ANCTNELYMMMR---DCWHAVPSQRPTFKQLV 356
Query: 1027 NLL 1029
L
Sbjct: 357 EDL 359
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 5e-19
Identities = 68/297 (22%), Positives = 120/297 (40%), Gaps = 63/297 (21%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHR 819
+G G G V +A + + AVK S DE ++E+ ++ + +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---LMSELKIMSHLGQHE 110
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK---------- 869
NI+ G C++ +++EY G L L+ + E +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 870 -GVANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS-----SN 921
VA +++L + +H D++++NVLL + H A + DFG+A+ + S N
Sbjct: 171 SQVAQGMAFLASKN-----CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 922 ------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDY--VSTNF 972
W APE T + DV S+G+L E+ G +P Y + N
Sbjct: 226 ARLPVKWM---------APESIFDCVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVN- 273
Query: 973 SSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
S F ++ + +++ P + SIM+ C P RPT +++C+ L
Sbjct: 274 SKFYKLVKD-----GYQMAQP-AFAPKNIYSIMQ---ACWALEPTHRPTFQQICSFL 321
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 1e-18
Identities = 63/304 (20%), Positives = 110/304 (36%), Gaps = 69/304 (22%)
Query: 767 IGKGRQGSVYKAELPSGIIF-------AVKKFNSQLLFDEMADQDEFLNEVLALTEI-RH 818
+G G G V +A G+I AVK E ++E+ L+ + H
Sbjct: 31 LGAGAFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREA---LMSELKVLSYLGNH 86
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-------- 870
NI+ G C+ + +++EY G L L+ + +
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 871 -------VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH--- 918
VA +++L + +H D++++N+LL + DFG+A+ +
Sbjct: 147 LLSFSYQVAKGMAFLASKN-----CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 919 --SSN------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDY-- 967
N W APE T + DV S+G+ E+ G+ P Y
Sbjct: 202 VVKGNARLPVKWM---------APESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPG 250
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ + S I + R+ +P ++ IM+ C P RPT K++
Sbjct: 251 MPVD----SKFYKMIKEG--FRMLSP-EHAPAEMYDIMK---TCWDADPLKRPTFKQIVQ 300
Query: 1028 LLCK 1031
L+ K
Sbjct: 301 LIEK 304
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 1e-18
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 46/224 (20%)
Query: 760 DFGEKY-----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
F + Y +G+G V L + +AVK Q + EV L
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG----HIRSRVFREVEML 64
Query: 814 TEIR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------DDAAAKEFGWNQRM 865
+ + HRN+++ F ++V E + GS+ + I K +A+
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS---------- 114
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLNPHSS-- 920
V++ VA+AL +LH+ I H D+ +N+L + ++ + DF + + +
Sbjct: 115 VVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171
Query: 921 -----NWTAFAGTFGYAAPEI-AHMMRATEKY----DVHSFGVL 954
G+ Y APE+ Y D+ S GV+
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 2e-18
Identities = 62/308 (20%), Positives = 110/308 (35%), Gaps = 77/308 (25%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V KA AVK E+ D L+E L ++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD---LLSEFNVLKQVNHPH 87
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD-----DAAAKEFGWNQRMNVIKG----- 870
+IK +G CS ++ EY GSL L++ G ++
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 871 -----------VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
++ + YL +VH D++++N+L+ + +SDFG+++ +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMK-----LVHRDLAARNILVAEGRKMKISDFGLSRDV-- 200
Query: 918 HSSN-------------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNH 963
+ + W A E T + DV SFGVL E++ G +
Sbjct: 201 YEEDSYVKRSQGRIPVKWM---------AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 964 PRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
P + + L HR+ P + +++ +M C + P+ RP
Sbjct: 252 P-------YPGIPPE--RLFNLLKTGHRMERP-DNCSEEMYRLML---QCWKQEPDKRPV 298
Query: 1022 MKKVCNLL 1029
+ L
Sbjct: 299 FADISKDL 306
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 2e-18
Identities = 60/302 (19%), Positives = 104/302 (34%), Gaps = 70/302 (23%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHR 819
+G+G G V +A+ + AVK E ++E+ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA---LMSELKILIHIGHHL 91
Query: 820 NIIKFHGFCS-NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-------- 870
N++ G C+ ++ E+ G+L+T L+ ++ K
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 871 -----VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-- 921
VA + +L +H D++++N+LL ++ + DFG+A+ + +
Sbjct: 152 CYSFQVAKGMEFLASRK-----CIHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDY 204
Query: 922 -----------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDY-- 967
W APE T + DV SFGVL E+ G P Y
Sbjct: 205 VRKGDARLPLKWM---------APETIFDRVYTIQSDVWSFGVLLWEIFSLGASP--YPG 253
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
V + + + R+ P ++ M C P RPT ++
Sbjct: 254 VKID----EEFCRRLKEG--TRMRAP-DYTTPEMYQTML---DCWHGEPSQRPTFSELVE 303
Query: 1028 LL 1029
L
Sbjct: 304 HL 305
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 2e-18
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 38/222 (17%)
Query: 750 LYEEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQD 804
+ +++ + F + Y IG G + + + FAVK + +
Sbjct: 9 IVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTE 64
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILK------DDAAAK 857
E E+L L +H NII + ++ ++V+E + G L IL+ +A+A
Sbjct: 65 E--IEIL-LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA- 120
Query: 858 EFGWNQRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAH----VSDFGIA 912
V+ + + YLH +VH D+ N+L E + DFG A
Sbjct: 121 ---------VLFTITKTVEYLHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFA 167
Query: 913 KFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
K L + T + APE+ D+ S GVL
Sbjct: 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVL 209
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-18
Identities = 67/299 (22%), Positives = 115/299 (38%), Gaps = 64/299 (21%)
Query: 767 IGKGRQGSVYKAELPSGIIF--------AVKKFNSQLLFDEMADQDEFLNEVLALTEI-R 817
+G+G G V AE AVK S +++D ++E+ + I +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 133
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG------- 870
H+NII G C+ +++ EY +G+L L+ + +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 871 ------VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH---- 918
VA + YL +H D++++NVL+ ++ ++DFG+A+ ++
Sbjct: 194 VSCAYQVARGMEYLASKK-----CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 919 -SSN------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVST 970
++N W APE T + DV SFGVL E+ G P Y
Sbjct: 249 KTTNGRLPVKWM---------APEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGV 297
Query: 971 NFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ E HR+ P + ++L +M C P RPT K++ L
Sbjct: 298 PVEELFKLLKE-----GHRMDKP-SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDL 347
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 5e-18
Identities = 43/244 (17%), Positives = 90/244 (36%), Gaps = 42/244 (17%)
Query: 381 IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE-AFGDHPNL 439
IP + L L+ HL + +F NL ++ R+ + + ++ +F + +
Sbjct: 26 IPSLPPSTQTLKLIE---THLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKV 82
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI-GDSSKLQVLDLSSNHIV 498
T +++ ++ I P+ + L+ L + + +
Sbjct: 83 THIEIRNTR---NLT---------------------YIDPDALKELPLLKFLGIFNTGLK 118
Query: 499 GKIPVQFEKLFSLNKL----ILNLNQLSGGVPLEFGSLT-ELQYLDLSANKLSSSIPKSM 553
P K++S + I + ++ F L E L L N +S+
Sbjct: 119 -MFP-DLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF-TSVQGYA 175
Query: 554 GNLSKLHYLNLSNNQFNHKIPTE-FEKLIH-LSELDLSHNFLQGEIPPQICNMESLEELN 611
N +KL + L+ N++ I + F + S LD+S + +P + +E L+EL
Sbjct: 176 FNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKG--LEHLKELI 232
Query: 612 LSHN 615
+
Sbjct: 233 ARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 5e-18
Identities = 40/208 (19%), Positives = 80/208 (38%), Gaps = 12/208 (5%)
Query: 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNF 185
+ L L L + +L + +Y ++ + LS + + + +
Sbjct: 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRN 92
Query: 186 SGRIPPS-LGNLSNLAYLYLNNNSLFGSIPNV--MGNLNSLSILDLSQNQLRGSIP-FSL 241
I P L L L +L + N L P++ + + + IL+++ N SIP +
Sbjct: 93 LTYIDPDALKELPLLKFLGIFNTGL-KMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAF 151
Query: 242 ANLSN-LGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIP-LSFSNL-SSLTLM 298
L N L LY N + N L + L++N+ I +F + S +L+
Sbjct: 152 QGLCNETLTLKLYNNGF-TSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210
Query: 299 SLFNNSLSGSIPPTQ-GNLEALSELGLY 325
+ S++ ++P +L+ L +
Sbjct: 211 DVSQTSVT-ALPSKGLEHLKELIARNTW 237
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 1e-16
Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 30/226 (13%)
Query: 412 LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMN 471
S + L+ + +L AF + PN++ + +S + ++ +F
Sbjct: 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLES--------HSFY---- 77
Query: 472 NIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEF- 529
+ SK+ +++ + + I ++L L L + L L
Sbjct: 78 -----------NLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKV 126
Query: 530 GSLTELQYLDLSANKLSSSIPKSM--GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELD 587
S L+++ N +SIP + G ++ L L NN F + L +
Sbjct: 127 YSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNGTKLDAVY 185
Query: 588 LSHNFLQGEIPPQICN--MESLEELNLSHNNLFDLIPGCFEEMRSL 631
L+ N I L++S ++ L E ++ L
Sbjct: 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKEL 231
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 2e-15
Identities = 41/209 (19%), Positives = 77/209 (36%), Gaps = 10/209 (4%)
Query: 366 SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN-HLFGLIPKSFRNLTSLERLRFNQNN 424
S L+L HL + H+ NL + + + + L L SF NL+ + +
Sbjct: 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTR 91
Query: 425 LFGKV-YEAFGDHPNLTFLDLSQNNLY--GEISFNWRNFPKLGTFNASMNNIYGSIPPEI 481
+ +A + P L FL + L +++ + + N SIP
Sbjct: 92 NLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTK-VYSTDIFFILEITDNPYMTSIPVNA 150
Query: 482 --GDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE-FGSLTE-LQY 537
G ++ L L +N + L+ + LN N+ + + FG +
Sbjct: 151 FQGLCNETLTLKLYNNGF-TSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSL 209
Query: 538 LDLSANKLSSSIPKSMGNLSKLHYLNLSN 566
LD+S +++ K + +L +L N
Sbjct: 210 LDVSQTSVTALPSKGLEHLKELIARNTWT 238
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 4e-15
Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 16/185 (8%)
Query: 82 SLSSLGLNG-----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNN 135
++S + ++ + SF + + ++ + I P L L+ L + N
Sbjct: 56 NISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT 115
Query: 136 QLSGVIPQE--IGHLTCLRMLYFDVNHLHGSIPLEI--GKLSLINVLTLCHNNFSGRIPP 191
L + P + +L N SIP+ G + L L +N F+ +
Sbjct: 116 GLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQG 173
Query: 192 SLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNS-LSILDLSQNQLRGSIPF-SLANLSNLG 248
N + L +YLN N I + G + S S+LD+SQ + ++P L +L L
Sbjct: 174 YAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKGLEHLKELI 232
Query: 249 ILYLY 253
+
Sbjct: 233 ARNTW 237
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 18/121 (14%), Positives = 40/121 (33%), Gaps = 3/121 (2%)
Query: 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSH 590
Q L L L + + NL + + +S + ++ + F L ++ +++ +
Sbjct: 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRN 89
Query: 591 NFLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCF-EEMRSLSRIDIAYNELQGPIPNS 648
I P + L+ L + + L ++I N IP +
Sbjct: 90 TRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVN 149
Query: 649 T 649
Sbjct: 150 A 150
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 6e-18
Identities = 46/218 (21%), Positives = 86/218 (39%), Gaps = 25/218 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFN-SQLL------------FDEMADQDEFLNEVLAL 813
+ +G+ + E +A+KK+ S L + D+F NE+ +
Sbjct: 39 LNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97
Query: 814 TEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVI 868
T+I++ + G +N +I+ EY++ S+ + D +I
Sbjct: 98 TDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCII 157
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
K V N+ SY+H++ I H D+ N+L+D +SDFG ++++ GT
Sbjct: 158 KSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESEYMV--DKKIKGSRGT 213
Query: 929 FGYAAPEI--AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + PE K D+ S G+ + P
Sbjct: 214 YEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 8e-18
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
++ L N + P F +L+ +DLS N++S P + L L+ L L N+
Sbjct: 36 EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITEL 95
Query: 573 IPTEFEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSL 631
+ FE L L L L+ N + + ++ +L L+L N L + G F +R++
Sbjct: 96 PKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154
Query: 632 SRIDIAYN 639
+ +A N
Sbjct: 155 QTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 2e-17
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 202 LYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGF 260
+ L N++ P L +DLS NQ+ + + L +L L LY N +
Sbjct: 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKITEL 95
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNNSLSGSIPP-TQGNLEA 318
S+ L SL L L+ N++ + + +F +L +L L+SL++N L +I T L A
Sbjct: 96 PKSLFEGLFSLQLLLLNANKI-NCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRA 153
Query: 319 LSELGLYINQLD 330
+ + L N
Sbjct: 154 IQTMHLAQNPFI 165
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 3e-16
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 177 VLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLR 234
+ L N IPP + L + L+NN + + + L SL+ L L N++
Sbjct: 36 EIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQI-SELAPDAFQGLRSLNSLVLYGNKIT 93
Query: 235 GSIPFSL-ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNL 292
+P SL L +L +L L N + +L +L L L +N+L +I +FS L
Sbjct: 94 -ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL-QTIAKGTFSPL 151
Query: 293 SSLTLMSLFNN 303
++ M L N
Sbjct: 152 RAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 1e-15
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592
+ + L N + P + KL ++LSNNQ + P F+ L L+ L L N
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91
Query: 593 LQGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
+ E+P + + SL+ L L+ N + L F+++ +L+ + + N+LQ
Sbjct: 92 IT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 1e-13
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 30/161 (18%)
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN 472
++ +R QN + AF + L +DLS N +
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQI----------------------- 68
Query: 473 IYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLE-F 529
+ P+ L L L N I ++P FE LFSL L+LN N+++ + ++ F
Sbjct: 69 --SELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINC-LRVDAF 124
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L L L L NKL + + L + ++L+ N F
Sbjct: 125 QDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 7e-13
Identities = 31/127 (24%), Positives = 53/127 (41%)
Query: 321 ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV 380
E+ L N + + P + LR + L +N L P+ L+SL+ L L N ++ +
Sbjct: 36 EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITEL 95
Query: 381 IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440
L L L+ + N + L +F++L +L L N L F +
Sbjct: 96 PKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQ 155
Query: 441 FLDLSQN 447
+ L+QN
Sbjct: 156 TMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 26/112 (23%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
F L L L N + +P + L L+ L L N+++ + L L +L
Sbjct: 76 FQGLRSLNSLVLYGNKI-TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNN 207
N L +I L + ++L N
Sbjct: 135 LYDNKLQ-TIAKGT-----------------------FSPLRAIQTMHLAQN 162
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 1e-17
Identities = 55/164 (33%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS---GGVPLEFGSL 532
S+P I + + LDL S + F L L L L+ NQL GV F L
Sbjct: 28 SVPSGIPADT--EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV---FDDL 82
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHN 591
TEL L L+ N+L+S +L++L L L NQ +P+ F++L L EL L+ N
Sbjct: 83 TELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTN 141
Query: 592 FLQGEIPPQICN-MESLEELNLSHNNLFDLIPGCFEEMRSLSRI 634
LQ IP + + +L+ L+LS N L + G F+ + L I
Sbjct: 142 QLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTI 184
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 3e-14
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
KL L L+ F LT+L +L+L N+L + +L++L L L+NNQ
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-AS 97
Query: 573 IPTE-FEKLIHLSELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRS 630
+P F+ L L +L L N L+ +P + + L+EL L+ N L + G F+++ +
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156
Query: 631 LSRIDIAYNELQ 642
L + ++ N+LQ
Sbjct: 157 LQTLSLSTNQLQ 168
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 5e-14
Identities = 50/185 (27%), Positives = 74/185 (40%), Gaps = 36/185 (19%)
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN 472
E+L L F LT+L+L N L
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQL----------------------- 71
Query: 473 IYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSG---GVPL 527
++ + D ++L L L++N + +P+ F+ L L+KL L NQL GV
Sbjct: 72 --QTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGV-- 126
Query: 528 EFGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSEL 586
F LT+L+ L L+ N+L S IP L+ L L+LS NQ F++L L +
Sbjct: 127 -FDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTI 184
Query: 587 DLSHN 591
L N
Sbjct: 185 TLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 8e-13
Identities = 50/157 (31%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Query: 130 LDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL-CHNNFSGR 188
LDL + L+ + LT L L D N L ++ + L + TL NN
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQL-QTLSAGVFD-DLTELGTLGLANNQLAS 97
Query: 189 IPPSL-GNLSNLAYLYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQLRGSIP---FSLAN 243
+P + +L+ L LYL N L S+P+ V L L L L+ NQL+ SIP F
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFD--K 153
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
L+NL L L N L L L + L NQ
Sbjct: 154 LTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQ 190
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 8e-13
Identities = 49/154 (31%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 106 LNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSI 165
L+L L L+KL L+L NQL + LT L L N L S+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SL 98
Query: 166 PLEI-GKLSLINVLTLCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGSIPN-VMGNLNS 222
PL + L+ ++ L L N +P + L+ L L LN N L SIP L +
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTN 156
Query: 223 LSILDLSQNQLRGSIPF-SLANLSNLGILYLYKN 255
L L LS NQL+ S+P + L L + L+ N
Sbjct: 157 LQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 8e-13
Identities = 50/155 (32%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285
LDL L + L+ L L L N L V +L L L L+ NQL S+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASL 98
Query: 286 PLS-FSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQLDGVIPPSI-GNL 340
PL F +L+ L + L N L S+P G L L EL L NQL IP L
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLK-SLPS--GVFDRLTKLKELRLNTNQL-QSIPAGAFDKL 154
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN 375
++L+TL L N + L L + L N
Sbjct: 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 1e-12
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 6/154 (3%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPP-TQGNLEALSELGLYINQLDG 331
+LDL L +F L+ LT ++L N L ++ +L L LGL NQL
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLA- 96
Query: 332 VIPPSI-GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI-GNLT 389
+P + +L+ L LYL N L L L +L L N L IP LT
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLT 155
Query: 390 KLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
L +++ N L + +F L L+ + N
Sbjct: 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 39/129 (30%), Positives = 50/129 (38%)
Query: 321 ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV 380
+L L L + + L+ L L L N L L L L L N L+ +
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASL 98
Query: 381 IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440
+LT+L + + N L L F LT L+ LR N N L AF NL
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 441 FLDLSQNNL 449
L LS N L
Sbjct: 159 TLSLSTNQL 167
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 9e-09
Identities = 50/160 (31%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
F L +LNL N L + + +L++L L L NNQL+ + HLT L LY
Sbjct: 55 FRGLTKLTWLNLDYNQL-QTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113
Query: 156 FDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGSI 213
N L S+P + +L+ + L L N IP L+NL L L+ N L S+
Sbjct: 114 LGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQL-QSV 170
Query: 214 P-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYL 252
P L L + L NQ + S ILYL
Sbjct: 171 PHGAFDRLGKLQTITLFGNQF---------DCSRCEILYL 201
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 50/213 (23%), Positives = 73/213 (34%), Gaps = 54/213 (25%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P I + L L G L L L+ L L N L + +LT+L
Sbjct: 29 VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
+ + N L L F +LT L++L N L
Sbjct: 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL--------------------------- 119
Query: 453 ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPV-QFEKLFS 510
S+P + D +KL+ L L++N + IP F+KL +
Sbjct: 120 ----------------------KSLPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTN 156
Query: 511 LNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543
L L L+ NQL F L +LQ + L N
Sbjct: 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 1e-17
Identities = 62/308 (20%), Positives = 115/308 (37%), Gaps = 77/308 (25%)
Query: 767 IGKGRQGSVYKAELPSGIIF------AVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
IG+G G V++A P + + AVK + D AD F E + E + N
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD---FQREAALMAEFDNPN 111
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG---------- 870
I+K G C+ + ++ EY+ G L L+ + + +
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 871 -----------VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
VA ++YL VH D++++N L+ ++DFG+++ +
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERK-----FVHRDLATRNCLVGENMVVKIADFGLSRNI-- 224
Query: 918 HSSN-------------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNH 963
+S++ W PE R T + DV ++GV+ E+ G
Sbjct: 225 YSADYYKADGNDAIPIRWM---------PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275
Query: 964 PRDYVSTNFSSFSN--MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
P + ++ +I + + L P + +L ++M LC + P RP+
Sbjct: 276 P-------YYGMAHEEVIYYVRDG--NILACP-ENCPLELYNLMR---LCWSKLPADRPS 322
Query: 1022 MKKVCNLL 1029
+ +L
Sbjct: 323 FCSIHRIL 330
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 1e-17
Identities = 62/281 (22%), Positives = 105/281 (37%), Gaps = 58/281 (20%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFN-SQLLFDEMADQDEFLN---EVLALTEIRHRNI 821
+G G G V+ A VK ++L D + + E+ L+ + H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 822 IKFHGFCSNAQHSFIVSEYLDRG-------SLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
IK N +V E G L + A+ F Q + +A
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR--Q-------LVSA 142
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
+ YL I+H DI +N+++ + + DFG A +L +T F GT Y AP
Sbjct: 143 VGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FCGTIEYCAP 198
Query: 935 EIAHMMRATEKY-----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
E + Y ++ S GV ++ +P E+ + ++
Sbjct: 199 E----VLMGNPYRGPELEMWSLGVTLYTLVFEENPFC--------------ELEETVEAA 240
Query: 990 LPTP---SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ P S+++M L+S + L PE R T++K+
Sbjct: 241 IHPPYLVSKELMS-LVSGL------LQPVPERRTTLEKLVT 274
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 2e-17
Identities = 67/241 (27%), Positives = 101/241 (41%), Gaps = 44/241 (18%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
P ++ +L ++ + Q L + + + + + S+ I L +
Sbjct: 13 FPDDAF--AETIKANLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQ-GIQYLPNVR 66
Query: 177 VLTLCHNNFSGRIPPSLG---NLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQ 232
L L N + L+NL YL L N L S+P V L +L L L +NQ
Sbjct: 67 YLALGGNKLH-----DISALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQ 120
Query: 233 LRGSIPFSLAN-LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FS 290
L+ S+P + + L+NL L L N L V L +L ELDLS NQL S+P F
Sbjct: 121 LQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL-QSLPEGVFD 178
Query: 291 NLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYD 350
L+ L + L+ N L S+P DGV L+SL+ ++L+D
Sbjct: 179 KLTQLKDLRLYQNQLK-SVP-------------------DGV----FDRLTSLQYIWLHD 214
Query: 351 N 351
N
Sbjct: 215 N 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 1e-16
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSG-GVPLEFGSLTE 534
+ +S + + +++ I + + L ++ L L N+L LT
Sbjct: 33 DAVTQNELNS-IDQIIANNSDIK-SVQG-IQYLPNVRYLALGGNKLHDISA---LKELTN 86
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHNFL 593
L YL L+ N+L S L+ L L L NQ +P F+KL +L+ L+L+HN L
Sbjct: 87 LTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYLNLAHNQL 145
Query: 594 QGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
Q +P + + +L EL+LS+N L L G F+++ L + + N+L+
Sbjct: 146 Q-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 6e-16
Identities = 62/235 (26%), Positives = 90/235 (38%), Gaps = 46/235 (19%)
Query: 79 ISISLSSLGL--NGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQ 136
L + + + + + + + I L +R L LG N+
Sbjct: 17 AFAETIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNK 74
Query: 137 LSGVIPQEIG---HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSL 193
L +I LT L L N L S+P + F
Sbjct: 75 L-----HDISALKELTNLTYLILTGNQL-QSLPNGV---------------FDK------ 107
Query: 194 GNLSNLAYLYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQLRGSIP---FSLANLSNLGI 249
L+NL L L N L S+P+ V L +L+ L+L+ NQL+ S+P F L+NL
Sbjct: 108 --LTNLKELVLVENQL-QSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFD--KLTNLTE 161
Query: 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNN 303
L L N L V L L +L L +NQL S+P F L+SL + L +N
Sbjct: 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL-KSVPDGVFDRLTSLQYIWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 6e-15
Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 44/244 (18%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
P + L V L S+ ++ + + V I L +
Sbjct: 13 FPDDA--FAETIKANLKKKSVTDAVTQNE--LNSIDQIIANNSDIKSVQG--IQYLPNVR 66
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
+ + N L + + + LT+L L N L F NL L L +N L
Sbjct: 67 YLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL--- 121
Query: 453 ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFS 510
S+P + D + L L+L+ N + +P F+KL +
Sbjct: 122 ----------------------QSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTN 158
Query: 511 LNKLILNLNQLS---GGVPLEFGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSN 566
L +L L+ NQL GV F LT+L+ L L N+L S +P + L+ L Y+ L +
Sbjct: 159 LTELDLSYNQLQSLPEGV---FDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHD 214
Query: 567 NQFN 570
N ++
Sbjct: 215 NPWD 218
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 2e-12
Identities = 55/224 (24%), Positives = 88/224 (39%), Gaps = 34/224 (15%)
Query: 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285
+L + + ++ + L+++ + + + I L ++ L L N+L I
Sbjct: 24 ANLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKL-HDI 78
Query: 286 PLSFSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGN-LSSL 343
+ L++LT + L N L S+P L L EL L NQL + P + + L++L
Sbjct: 79 S-ALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSL-PDGVFDKLTNL 135
Query: 344 RTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403
L L N L+SL GV LT L +++ N L
Sbjct: 136 TYLNLAHN-----------QLQSLP---------KGVFDK----LTNLTELDLSYNQLQS 171
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQN 447
L F LT L+ LR QN L F +L ++ L N
Sbjct: 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 84.7 bits (209), Expect = 2e-17
Identities = 38/302 (12%), Positives = 87/302 (28%), Gaps = 68/302 (22%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-------- 817
+G+ + +A + +G F V + EVL L +R
Sbjct: 81 LGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQA 139
Query: 818 --------------HRNIIKFHGFCSNAQHSFIVSEYL-------DRGSLTTILKDDAAA 856
K + + +++S + + + +L ++
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199
Query: 857 KE-FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915
+ + R+ + V L+ LHH +VH + +++LD ++ F
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRD 256
Query: 916 NPHSSNWTAFAGTFGYAAPEI-----------AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + G+ PE+ T +D + G++ + + P
Sbjct: 257 GARVV----SSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312
Query: 965 RDYVSTNFSSFSNMIT-EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
+ + + E +P P R +++ L E R
Sbjct: 313 -------ITKDAALGGSEWIFRSCKNIPQPVRALLEGF----------LRYPKEDRLLPL 355
Query: 1024 KV 1025
+
Sbjct: 356 QA 357
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 2e-17
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180
L+ +LG ++ ++ Q+ L+ ++ D +++ ++ + + L L
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVSQK--ELSGVQNFNGDNSNIQSLAGMQ--FFTNLKELHL 70
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
HN S + P L +L+ L L +N N L ++ + LS L L N+LR S
Sbjct: 71 SHNQIS-DLSP-LKDLTKLEELSVNRNRL-KNLNGI--PSACLSRLFLDNNELR-DTD-S 123
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSL 300
L +L NL IL + N L ++G L L LDL N++ + L + L + + L
Sbjct: 124 LIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITNTGGL--TRLKKVNWIDL 179
Query: 301 FNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
Q L + + + + P I N S +
Sbjct: 180 TGQKCVNEPVKYQPELYITNTVKDPDGRW--ISPYYISNGGSYVDGCVLWE 228
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 6e-17
Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 15/212 (7%)
Query: 437 PNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNH 496
N +L + ++ +S + FN +NI S+ + + L+ L LS N
Sbjct: 19 ANAVKQNLGKQSVTDLVSQK--ELSGVQNFNGDNSNI-QSLAG-MQFFTNLKELHLSHNQ 74
Query: 497 IVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNL 556
I + + L L +L +N N+L L L L L N+L S+ +L
Sbjct: 75 IS-DLS-PLKDLTKLEELSVNRNRLKN---LNGIPSACLSRLFLDNNELRD--TDSLIHL 127
Query: 557 SKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNN 616
L L++ NN+ L L LDL N + + ++ + ++L+
Sbjct: 128 KNLEILSIRNNKLKS--IVMLGFLSKLEVLDLHGNEIT-NTGG-LTRLKKVNWIDLTGQK 183
Query: 617 LFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS 648
+ E+ + + P S
Sbjct: 184 CVNEPVKYQPELYITNTVKDPDGRWISPYYIS 215
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 3e-16
Identities = 37/198 (18%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 444 LSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV 503
+ + ++ F N ++ + + S +Q + +++I +
Sbjct: 3 IQRPTPINQV-FPDPGLANAVKQNLGKQSV--TDLVSQKELSGVQNFNGDNSNIQ-SLAG 58
Query: 504 QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLN 563
+ +L +L L+ NQ+S PL+ LT+L+ L ++ N+L + + + L L
Sbjct: 59 -MQFFTNLKELHLSHNQISDLSPLK--DLTKLEELSVNRNRLKNL---NGIPSACLSRLF 112
Query: 564 LSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPG 623
L NN+ L +L L + +N L+ I + + LE L+L N + +
Sbjct: 113 LDNNELRD--TDSLIHLKNLEILSIRNNKLK-SIVM-LGFLSKLEVLDLHGNEITNTGG- 167
Query: 624 CFEEMRSLSRIDIAYNEL 641
++ ++ ID+ +
Sbjct: 168 -LTRLKKVNWIDLTGQKC 184
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 4e-16
Identities = 45/211 (21%), Positives = 75/211 (35%), Gaps = 15/211 (7%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
S + N + + ++ + + L+ L L +NQ+S + P + LT L L
Sbjct: 36 SQKELSGVQNFNGDNSNI-QSLAG-MQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN 215
+ N L + L + L L +N SL +L NL L + NN L SI
Sbjct: 92 VNRNRLKNLNGIPSACL---SRLFLDNNELRD--TDSLIHLKNLEILSIRNNKL-KSIVM 145
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ G L+ L +LDL N++ + L L + + L L +
Sbjct: 146 L-GFLSKLEVLDLHGNEIT-NTG-GLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVK 202
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
+ + P SN S +
Sbjct: 203 DPDGRWIS--PYYISNGGSYVDGCVLWELPV 231
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 5e-14
Identities = 34/234 (14%), Positives = 79/234 (33%), Gaps = 17/234 (7%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
L + K L + ++ ++ L+ + N +++ L + T+L+ L
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQSL--AGMQFFTNLKELHL 70
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPE 480
+ N + D L L +++N L ++ L N +
Sbjct: 71 SHNQI--SDLSPLKDLTKLEELSVNRNRL-KNLNGI--PSACLSRLFLDNNEL--RDTDS 123
Query: 481 IGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDL 540
+ L++L + +N + I L L L L+ N+++ L L ++ ++DL
Sbjct: 124 LIHLKNLEILSIRNNKLK-SIV-MLGFLSKLEVLDLHGNEITNTGGLT--RLKKVNWIDL 179
Query: 541 SANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
+ K + K L + + + ++ P + +
Sbjct: 180 TGQKCVNEPVKYQPELYITNTVKDPDGRWIS--PYYISNGGSYVDGCVLWELPV 231
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 40/234 (17%), Positives = 79/234 (33%), Gaps = 17/234 (7%)
Query: 315 NLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCR 374
L + L + ++ LS ++ ++ L + + +L +L L
Sbjct: 17 GLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQSLAG--MQFFTNLKELHLSH 72
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFG 434
N +S + P + +LTKL +++ N L L + L RL + N L + ++
Sbjct: 73 NQISDLSP--LKDLTKLEELSVNRNRLKNL---NGIPSACLSRLFLDNNEL--RDTDSLI 125
Query: 435 DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
NL L + N L I KL + N I + + K+ +DL+
Sbjct: 126 HLKNLEILSIRNNKL-KSIV-MLGFLSKLEVLDLHGNEIT-NTGG-LTRLKKVNWIDLTG 181
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSS 548
V + +L+ N + + P + + +
Sbjct: 182 QKCVNEPVKYQPELYITNTVKDPDGRWI--SPYYISNGGSYVDGCVLWELPVYT 233
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 4e-12
Identities = 41/195 (21%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156
F +L L+LS N + ++ P + +L+KL L + N+L + CL L+
Sbjct: 59 MQFFTNLKELHLSHNQI-SDLSP-LKDLTKLEELSVNRNRLKNL---NGIPSACLSRLFL 113
Query: 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV 216
D N L + L L + +L++ +N I LG LS L L L+ N + + +
Sbjct: 114 DNNELRDTDSLI--HLKNLEILSIRNNKLK-SIVM-LGFLSKLEVLDLHGNEI-TNTGGL 168
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276
L ++ +DL+ + L + P I N S + +
Sbjct: 169 -TRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWIS--PYYISNGGSYVDGCV 225
Query: 277 SENQLFGSIPLSFSN 291
+ +S+
Sbjct: 226 LWELPVYTDEVSYKF 240
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 3e-17
Identities = 61/308 (19%), Positives = 105/308 (34%), Gaps = 72/308 (23%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHR 819
+G G G V A I AVK + E ++E+ +T++ H
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREA---LMSELKMMTQLGSHE 109
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--------- 870
NI+ G C+ + +++ EY G L L+ + N +
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 871 -----------VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
VA + +L VH D++++NVL+ + DFG+A+ +
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKS-----CVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 918 H-----SSN------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPR 965
N W APE T K DV S+G+L E+ G +P
Sbjct: 225 DSNYVVRGNARLPVKWM---------APESLFEGIYTIKSDVWSYGILLWEIFSLGVNP- 274
Query: 966 DY--VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
Y + + +N I ++ P +++ IM+ C RP+
Sbjct: 275 -YPGIPVD----ANFYKLIQNG--FKMDQP-FYATEEIYIIMQ---SCWAFDSRKRPSFP 323
Query: 1024 KVCNLLCK 1031
+ + L
Sbjct: 324 NLTSFLGC 331
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-16
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 202 LYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260
L LNNN + L L ++ S N++ + S + + L N L
Sbjct: 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 96
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNNSLSGSIPP-TQGNLEA 318
+ L+SL L L N++ + SF LSS+ L+SL++N ++ ++ P L +
Sbjct: 97 QHKMFKGLESLKTLMLRSNRI-TCVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHS 154
Query: 319 LSELGLYINQLD 330
LS L L N +
Sbjct: 155 LSTLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 1e-15
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 513 KLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH 571
+L LN N+ + F L +L+ ++ S NK++ + S ++ + L++N+
Sbjct: 36 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRL-E 94
Query: 572 KIPTE-FEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNLFDLIPGCFEEMR 629
+ + F+ L L L L N + + + S+ L+L N + + PG F+ +
Sbjct: 95 NVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLH 153
Query: 630 SLSRIDIAYN 639
SLS +++ N
Sbjct: 154 SLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 3e-14
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 533 TELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L L+ N+ + + L +L +N SNN+ FE ++E+ L+ N
Sbjct: 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91
Query: 592 FLQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
L+ + ++ +ESL+ L L N + + F + S+ + + N++
Sbjct: 92 RLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT 142
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 1e-13
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 437 PNLTFLDLSQNNLYG-EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSS 494
L L+ N E + ++ P+L N S N I I + S + + L+S
Sbjct: 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKI-TDIEEGAFEGASGVNEILLTS 90
Query: 495 NHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM 553
N + + + F+ L SL L+L N+++ F L+ ++ L L N++++ P +
Sbjct: 91 NRLEN-VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 149
Query: 554 GNLSKLHYLNLSNNQFN 570
L L LNL N FN
Sbjct: 150 DTLHSLSTLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 2e-11
Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 59/191 (30%)
Query: 116 NIPPQISNLSKLRALDLGNNQLSGVIPQEI-GHLTCLRMLYFDVNHLHGSIPLEIGKLSL 174
+IP + L L NN+ + + I L LR + F N +
Sbjct: 29 HIPQYTAEL------RLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT------------ 70
Query: 175 INVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQL 233
+ F G S + + L +N L ++ + + L SL L L N++
Sbjct: 71 ----DIEEGAFEG--------ASGVNEILLTSNRL-ENVQHKMFKGLESLKTLMLRSNRI 117
Query: 234 RGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNL 292
+ L S+ L L +NQ+ ++ +F L
Sbjct: 118 T-CVG-----------------------NDSFIGLSSVRLLSLYDNQI-TTVAPGAFDTL 152
Query: 293 SSLTLMSLFNN 303
SL+ ++L N
Sbjct: 153 HSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 1/128 (0%)
Query: 321 ELGLYINQLDGVIPPSI-GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSG 379
EL L N+ + I L LR + +N + ++++ L N L
Sbjct: 36 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 95
Query: 380 VIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439
V L L + + N + + SF L+S+ L N + AF +L
Sbjct: 96 VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSL 155
Query: 440 TFLDLSQN 447
+ L+L N
Sbjct: 156 STLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 5e-10
Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 11/129 (8%)
Query: 82 SLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGV 140
+ L G F+ P L +N S N + +I S + + L +N+L V
Sbjct: 43 EFTVLEATGIFK-----KLPQLRKINFSNNKI-TDIEEGAFEGASGVNEILLTSNRLENV 96
Query: 141 IPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPP-SLGNLSN 198
+ L L+ L N + + + LS + +L+L N + + P + L +
Sbjct: 97 QHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHS 154
Query: 199 LAYLYLNNN 207
L+ L L N
Sbjct: 155 LSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 8e-08
Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 49/176 (27%)
Query: 369 KLELCRNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFG 427
+L L N + + I L +L +N N + + +F + + + N L
Sbjct: 36 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 95
Query: 428 KVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKL 487
++ F +L L L N + + +
Sbjct: 96 VQHKMFKGLESLKTLMLRSNRI-------------------------TCVGNDS------ 124
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543
F L S+ L L NQ++ P F +L L L+L AN
Sbjct: 125 -----------------FIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 82.9 bits (204), Expect = 2e-16
Identities = 50/326 (15%), Positives = 95/326 (29%), Gaps = 34/326 (10%)
Query: 345 TLYLYDNGFYG-LVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403
+ + Y G P+++ +S+ E C + + L+L+
Sbjct: 227 SAWFYHRWLLGRAEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVE 286
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLD-----LSQNNLYGEISFNWR 458
RN S L T D + + +
Sbjct: 287 WRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSA 346
Query: 459 NFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNL 518
+L S+ + E+ +LQ L+ + + I + L L L
Sbjct: 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETL 405
Query: 519 NQLSG---------------------GVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLS 557
S + +++ L L+ L+ + L
Sbjct: 406 QYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTV--LCHLEQLL 463
Query: 558 KLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNL 617
+ +L+LS+N+ +P L L L S N L+ + + N+ L+EL L +N L
Sbjct: 464 LVTHLDLSHNRL-RALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNRL 520
Query: 618 FDL-IPGCFEEMRSLSRIDIAYNELQ 642
L +++ N L
Sbjct: 521 QQSAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 80.2 bits (197), Expect = 1e-15
Identities = 59/361 (16%), Positives = 101/361 (27%), Gaps = 41/361 (11%)
Query: 12 FLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIF 71
+LL + S S + + L + +S
Sbjct: 234 WLLGRAEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMV-DEAPLSVEWRTPDG 292
Query: 72 CNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNI---PPQISNLSKLR 128
N V L + LN +F C +L + +L
Sbjct: 293 RNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLF 352
Query: 129 ALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGR 188
+L + + V+ E+ L+ L + +I L + L + FS
Sbjct: 353 RCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFS-- 409
Query: 189 IPPSLGNLSNL--AYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSN 246
+L + + AYL + + + +L L+ L + L L
Sbjct: 410 ---TLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLC-HLEQLLL 464
Query: 247 LGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
+ L L N L +P + L+ L L S+N L ++ +NL L + L NN L
Sbjct: 465 VTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQ 521
Query: 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS 366
A+ L + L L L N L
Sbjct: 522 --------QSAAIQPL---------------VSCPRLVLLNLQGNSLCQE-EGIQERLAE 557
Query: 367 L 367
+
Sbjct: 558 M 558
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 70.6 bits (172), Expect = 1e-12
Identities = 52/356 (14%), Positives = 109/356 (30%), Gaps = 31/356 (8%)
Query: 198 NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257
N + N+ S + ++G +L ++ + +
Sbjct: 217 NAFFTDPNDQSAWFYHRWLLGRAEPHDVLCC----------VHVSREEACLSVCFSRPLT 266
Query: 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLE 317
G + + L + G S L L SL + + +
Sbjct: 267 VGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSD 326
Query: 318 ALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL 377
+ E L ++ + L L ++ +E+ K L +LE
Sbjct: 327 SQKECVLLKDRPE-CWCRDSATDEQLFRCELSVE-KSTVLQSELESCKELQELEPENKWC 384
Query: 378 SGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLR-----FNQNNLFGKVYEA 432
I + L + + L + F L +++ +R ++ +
Sbjct: 385 L---LTIILLMRALDPLLYEKETL-----QYFSTLKAVDPMRAAYLDDLRSKFLLENSVL 436
Query: 433 FGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDL 492
++ ++ L L+ +L + + + + S N + ++PP + L+VL
Sbjct: 437 KMEYADVRVLHLAHKDL-TVLC-HLEQLLLVTHLDLSHNRL-RALPPALAALRCLEVLQA 493
Query: 493 SSNHIVGKIPVQFEKLFSLNKLILNLNQLSG-GVPLEFGSLTELQYLDLSANKLSS 547
S N + + L L +L+L N+L S L L+L N L
Sbjct: 494 SDNALE-NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 69.8 bits (170), Expect = 2e-12
Identities = 47/268 (17%), Positives = 81/268 (30%), Gaps = 38/268 (14%)
Query: 13 LLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISP-CTWFGIF 71
+LL + L + S++ S L S ++ P W +
Sbjct: 332 VLLKDRPECWCRDSATDEQLFRCELSVEKSTVLQSELESCK----ELQELEPENKWCLLT 387
Query: 72 CNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALD 131
L+ R + L F YL+ + + +R L
Sbjct: 388 IILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLH 447
Query: 132 LGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPP 191
L + L+ + + L + L N L +PP
Sbjct: 448 LAHKDLTVLC--HLEQLLLVTHLDLSHNRLR-------------------------ALPP 480
Query: 192 SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGIL 250
+L L L L ++N+L ++ V NL L L L N+L+ + L + L +L
Sbjct: 481 ALAALRCLEVLQASDNALE-NVDGV-ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538
Query: 251 YLYKN---SLFGFIPSVIGNLKSLFELD 275
L N G + L S+ +
Sbjct: 539 NLQGNSLCQEEGIQERLAEMLPSVSSIL 566
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 6e-16
Identities = 44/218 (20%), Positives = 79/218 (36%), Gaps = 47/218 (21%)
Query: 760 DFGEKY-----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
+ Y +G G G V + +G A+K D + EV
Sbjct: 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY---------DSPKARQEVDHH 75
Query: 814 TEI-RHRNIIKFHGFCSNAQHS----FIVSEYLDRGSL-TTILK--------DDAAAKEF 859
+ +I+ N H I+ E ++ G L + I + +AA
Sbjct: 76 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA---- 131
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAKFLN 916
+++ + A+ +LH I H D+ +N+L S+ + ++DFG AK
Sbjct: 132 ------EIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182
Query: 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
++ T Y APE+ + + D+ S GV+
Sbjct: 183 QNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 218
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 1e-15
Identities = 44/128 (34%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Query: 225 ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284
IL L NQ+ P +L NL LYL N L V +L L LDL NQL
Sbjct: 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL-TV 102
Query: 285 IPLS-FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSL 343
+P + F L L + + N L+ +P L L+ L L NQL + + LSSL
Sbjct: 103 LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161
Query: 344 RTLYLYDN 351
YL+ N
Sbjct: 162 THAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 5e-15
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
L L+ NQ++ P F SL L+ L L +N+L + +L++L L+L NQ
Sbjct: 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL-TV 102
Query: 573 IPTE-FEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSL 631
+P+ F++L+HL EL + N L E+P I + L L L N L + G F+ + SL
Sbjct: 103 LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161
Query: 632 SRI 634
+
Sbjct: 162 THA 164
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 3e-11
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 29/160 (18%)
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN 472
T+ + L + N + F NL L L N L
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL----------------------- 76
Query: 473 IYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFG 530
G++P + DS ++L VLDL +N + +P F++L L +L + N+L+ +P
Sbjct: 77 --GALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLTE-LPRGIE 132
Query: 531 SLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
LT L +L L N+L S + LS L + L N ++
Sbjct: 133 RLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 6e-11
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLI 175
+P I + + L L +NQ++ + P L L+ LY N L ++P+ + L+ +
Sbjct: 34 VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQL 90
Query: 176 NVLTLCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLR 234
VL L N + +P ++ L +L L++ N L +P + L L+ L L QNQL+
Sbjct: 91 TVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQNQLK 148
Query: 235 GSIPF-SLANLSNLGILYLYKN 255
SIP + LS+L YL+ N
Sbjct: 149 -SIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQL 329
L L +NQ+ P F +L +L + L +N L ++P G +L L+ L L NQL
Sbjct: 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPV--GVFDSLTQLTVLDLGTNQL 100
Query: 330 DGVIPPSI-GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPH----S 384
V+P ++ L L+ L++ N L P I L L+ L L +N L + PH
Sbjct: 101 T-VLPSAVFDRLVHLKELFMCCNKLTEL-PRGIERLTHLTHLALDQNQLKSI-PHGAFDR 157
Query: 385 IGNLTKLVLVN 395
+ +LT L
Sbjct: 158 LSSLTHAYLFG 168
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 8e-07
Identities = 35/176 (19%), Positives = 53/176 (30%), Gaps = 51/176 (28%)
Query: 369 KLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGK 428
L L N ++ + P +L L + + N L L F +LT L L N L
Sbjct: 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL--- 100
Query: 429 VYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKL 487
+P + D L
Sbjct: 101 ----------------------------------------------TVLPSAVFDRLVHL 114
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543
+ L + N + ++P E+L L L L+ NQL F L+ L + L N
Sbjct: 115 KELFMCCNKL-TELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 4e-06
Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 9/120 (7%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV---IPHSIGNLT 389
+P I ++ + LYL+DN L P L +L +L L N L + + S+ LT
Sbjct: 34 VPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91
Query: 390 KLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
L L N L L F L L+ L N L ++ +LT L L QN L
Sbjct: 92 VLDLGT---NQLTVLPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQNQL 147
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 2e-15
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 202 LYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261
LYL+ N +P + N L+++DLS N++ S +N++ L L L N L
Sbjct: 36 LYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94
Query: 262 PSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNN 303
P LKSL L L N + +P +F++LS+L+ +++ N
Sbjct: 95 PRTFDGLKSLRLLSLHGNDI-SVVPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 9e-12
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
+L L+ NQ + VP E + L +DLS N++S+ +S N+++L L LS N+
Sbjct: 35 ELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL-RC 92
Query: 573 IPTE-FEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNNLFD 619
IP F+ L L L L N + +P ++ +L L + N
Sbjct: 93 IPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAI-GANPLY 139
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 6e-10
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 154 LYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGS 212
LY D N +P E+ + ++ L +N S + N++ L L L+ N L
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRL-RC 92
Query: 213 IPN-VMGNLNSLSILDLSQNQLRGSIP-FSLANLSNLGILYLYKN 255
IP L SL +L L N + +P + +LS L L + N
Sbjct: 93 IPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQL 329
EL L NQ +P SN LTL+ L NN +S ++ N+ L L L N+L
Sbjct: 35 ELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRIS-TLSN--QSFSNMTQLLTLILSYNRL 90
Query: 330 DGVIPPSI-GNLSSLRTLYLYDNGFYGLVPNEI-GYLKSLSKLELCRN 375
IPP L SLR L L+ N VP L +LS L + N
Sbjct: 91 -RCIPPRTFDGLKSLRLLSLHGNDISV-VPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 6e-08
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 346 LYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI 405
LYL N F LVP E+ K L+ ++L N +S + S N+T+L+ + + N L +
Sbjct: 36 LYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94
Query: 406 PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY 450
P++F L SL L + N++ AF D L+ L + N LY
Sbjct: 95 PRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNLFDL 620
L L NQF +P E HL+ +DLS+N + + Q NM L L LS+N L +
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLRCI 93
Query: 621 IPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKD 653
P F+ ++SL + + N++ +P AF D
Sbjct: 94 PPRTFDGLKSLRLLSLHGNDISV-VPEG-AFND 124
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 31/134 (23%)
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN 472
+ L + N V + ++ +LT +DLS N +
Sbjct: 31 RDVTELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRI----------------------- 66
Query: 473 IYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPV-QFEKLFSLNKLILNLNQLSGGVPLE-F 529
++ + + ++L L LS N + IP F+ L SL L L+ N +S VP F
Sbjct: 67 --STLSNQSFSNMTQLLTLILSYNRL-RCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAF 122
Query: 530 GSLTELQYLDLSAN 543
L+ L +L + AN
Sbjct: 123 NDLSALSHLAIGAN 136
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-15
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS---GGVPLEFGSL 532
S+P I + LDL +N + F++L SL +L L N+L GV F L
Sbjct: 21 SVPTGIPAQT--TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGV---FNKL 75
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHN 591
T L YL+LS N+L S L++L L L+ NQ +P F+KL L +L L N
Sbjct: 76 TSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL-QSLPDGVFDKLTQLKDLRLYQN 134
Query: 592 FLQGEIPPQIC-NMESLEELNLSHNNLFD 619
L+ +P + + SL+ + L H+N +D
Sbjct: 135 QLKS-VPDGVFDRLTSLQYIWL-HDNPWD 161
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-14
Identities = 48/130 (36%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285
LDL N L+ L++L LYL N L V L SL L+LS NQL S+
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL-QSL 91
Query: 286 PLS-FSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQLDGVIPPSIGNLS 341
P F L+ L ++L N L S+P G L L +L LY NQL V L+
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQ-SLPD--GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLT 148
Query: 342 SLRTLYLYDN 351
SL+ ++L+DN
Sbjct: 149 SLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 3e-12
Identities = 44/123 (35%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
L L N L F LT L L L NKL S L+ L YLNLS NQ
Sbjct: 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 573 IPTEFEKLIHLSELDLSHNFLQGEIPPQICN-MESLEELNLSHNNLFDLIPGCFEEMRSL 631
F+KL L EL L+ N LQ +P + + + L++L L N L + G F+ + SL
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 150
Query: 632 SRI 634
I
Sbjct: 151 QYI 153
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKLSLI 175
+P I ++ LDL N L + LT L LY N L S+P + KL+ +
Sbjct: 22 VPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSL 78
Query: 176 NVLTLCHNNFSGRIPPSL-GNLSNLAYLYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQL 233
L L N +P + L+ L L LN N L S+P+ V L L L L QNQL
Sbjct: 79 TYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQL-QSLPDGVFDKLTQLKDLRLYQNQL 136
Query: 234 RGSIPF-SLANLSNLGILYLYKN 255
+ S+P L++L ++L+ N
Sbjct: 137 K-SVPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592
+ YLDL N L S L+ L L L N+ F KL L+ L+LS N
Sbjct: 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87
Query: 593 LQGEIPPQICN-MESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
LQ +P + + + L+EL L+ N L L G F+++ L + + N+L+
Sbjct: 88 LQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQL 329
LDL N L F L+SLT + L N L S+P G L +L+ L L NQL
Sbjct: 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPN--GVFNKLTSLTYLNLSTNQL 88
Query: 330 DGVIPPSI-GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPH----S 384
+P + L+ L+ L L N L L L L L +N L V P
Sbjct: 89 Q-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSV-PDGVFDR 146
Query: 385 IGNLTKLVLVN 395
+ +L + L +
Sbjct: 147 LTSLQYIWLHD 157
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 293 SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN-LSSLRTLYLYDN 351
+ T + L NSL L +L++L L N+L + P + N L+SL L L N
Sbjct: 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL-PNGVFNKLTSLTYLNLSTN 86
Query: 352 GFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFR 410
L L L +L L N L +P + LT+L + + +N L + F
Sbjct: 87 QLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFD 145
Query: 411 NLTSLERLRFNQN 423
LTSL+ + + N
Sbjct: 146 RLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 35/117 (29%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P I + L L N L L SL++L L N L + LT L
Sbjct: 22 VPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLT 79
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
+N+ N L L F LT L+ L N N L F L L L QN L
Sbjct: 80 YLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 3e-15
Identities = 62/257 (24%), Positives = 95/257 (36%), Gaps = 27/257 (10%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
D F IGKG G V + + ++A+K N Q E + E+ + +
Sbjct: 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEVRNVFKELQIMQGL 72
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKGV 871
H ++ + + F+V + L G L L+ + K F I +
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF--------ICEL 124
Query: 872 ANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
AL YL I+H D+ N+LLD H++DF IA L + T AGT
Sbjct: 125 VMALDYLQNQR----IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT-MAGTKP 179
Query: 931 YAAPEIAHMMRATEKYDVH----SFGVLALEVIKGNHP-RDYVSTNFSSFSNMITEINQN 985
Y APE+ R Y S GV A E+++G P ST+ +
Sbjct: 180 YMAPEMF-SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT 238
Query: 986 LDHRLPTPSRDVMDKLM 1002
++ KL+
Sbjct: 239 YPSAWSQEMVSLLKKLL 255
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 4e-15
Identities = 51/221 (23%), Positives = 82/221 (37%), Gaps = 43/221 (19%)
Query: 752 EEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEV 810
II + +G G G V + + FA+K + D + EV
Sbjct: 57 NAIIDDYKVTSQV--LGLGINGKVLQIFNKRTQEKFALKM---------LQDCPKARREV 105
Query: 811 LALTEI-RHRNIIKFHGFCSNA----QHSFIVSEYLDRGSL-TTILK--------DDAAA 856
+ +I++ N + IV E LD G L + I +A+
Sbjct: 106 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS- 164
Query: 857 KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIAK 913
++K + A+ YLH I H D+ +N+L S+ ++DFG AK
Sbjct: 165 ---------EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212
Query: 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
H+S T T Y APE+ + + D+ S GV+
Sbjct: 213 ETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 252
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 4e-15
Identities = 79/455 (17%), Positives = 131/455 (28%), Gaps = 78/455 (17%)
Query: 222 SLSILDLSQNQL-RGSIPFSLANLSNLGILYLYKNSL----FGFIPSVIGNLKSLFELDL 276
+ LD+ +L L L ++ L L I S + +L EL+L
Sbjct: 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 63
Query: 277 SENQL--FGSIPLSF---SNLSSLTLMSLFNNSLS----GSIPPTQGNLEALSELGLYIN 327
N+L G + + + +SL N L+ G + T L L EL L N
Sbjct: 64 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN 123
Query: 328 QLDGVIPPSIG-----NLSSLRTLYLYDNGFYGLVPNEIGYL----KSLSKLELCRNHLS 378
L + L L L + + +L + N ++
Sbjct: 124 LLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL----FGKVYEAFG 434
+ L + + + C LE L+ + +
Sbjct: 184 EA---GVRVLCQGLKDSPC----------------QLEALKLESCGVTSDNCRDLCGIVA 224
Query: 435 DHPNLTFLDLSQNNLYGE-----ISFNWRNFPKLGTFNASMNNI----YGSIPPEIGDSS 485
+L L L N L +L T I G + +
Sbjct: 225 SKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKE 284
Query: 486 KLQVLDLSSNHIVGK-----IPVQFEKLFSLNKLILNLNQLSGGVPLEFGSL----TELQ 536
L+ L L+ N + + E L L + + F S+ L
Sbjct: 285 SLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLL 344
Query: 537 YLDLSANKLSSSIPKSMG-----NLSKLHYLNLSNNQFNHK----IPTEFEKLIHLSELD 587
L +S N+L + + + S L L L++ + + L ELD
Sbjct: 345 ELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELD 404
Query: 588 LSHNFLQGEIPPQIC-----NMESLEELNLSHNNL 617
LS+N L Q+ LE+L L
Sbjct: 405 LSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYW 439
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-13
Identities = 86/513 (16%), Positives = 141/513 (27%), Gaps = 122/513 (23%)
Query: 103 LMYLNLSCNVL-YGNIPPQISNLSKLRALDLGNNQLS----GVIPQEIGHLTCLRMLYFD 157
+ L++ C L + L + + + L + L+ I + L L
Sbjct: 5 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 64
Query: 158 VNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSL----FGSI 213
N L G ++ L + L L N L G +
Sbjct: 65 SNELGDV-----GVHCVLQGLQTPS--------------CKIQKLSLQNCCLTGAGCGVL 105
Query: 214 PNVMGNLNSLSILDLSQNQLRGSIPFSLA-----NLSNLGILYLYKNSL----FGFIPSV 264
+ + L +L L LS N L + L L L L SL + SV
Sbjct: 106 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165
Query: 265 IGNLKSLFELDLSENQL--FGSIPLSF---SNLSSLTLMSLFNNSLSGSIPPTQGNLEAL 319
+ EL +S N + G L + L + L + + T N L
Sbjct: 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGV------TSDNCRDL 219
Query: 320 SELGLYINQLDGVIPPSIGNLSSLRTLYLYDN-----GFYGLVPNEIGYLKSLSKLELCR 374
+ + + +SLR L L N G L P + L L +
Sbjct: 220 CGI--------------VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWE 265
Query: 375 NHLSGV----IPHSIGNLTKLVLVNMCENHL-----FGLIPKSFRNLTSLERLRFNQNNL 425
++ + + L +++ N L L LE L +
Sbjct: 266 CGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325
Query: 426 FGKVYEAFGD----HPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEI 481
F + L L +S N L +L
Sbjct: 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDA------GVRELCQGLGQPG---------- 369
Query: 482 GDSSKLQVLDLSSNHI----VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQY 537
S L+VL L+ + + SL +L L+ N L
Sbjct: 370 ---SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG--------------- 411
Query: 538 LDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
D +L S+ + L L L + ++
Sbjct: 412 -DAGILQLVESVRQ---PGCLLEQLVLYDIYWS 440
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 4e-12
Identities = 51/275 (18%), Positives = 87/275 (31%), Gaps = 48/275 (17%)
Query: 412 LTSLERLRFNQNNLFGKVYEAFGD----HPNLTFLDLSQNNLYGEISFNW------RNFP 461
L + +R + L + +P L L+L N L G++ +
Sbjct: 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNEL-GDVGVHCVLQGLQTPSC 85
Query: 462 KLGTFNASMNNI----YGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQF------EKLFSL 511
K+ + + G + + LQ L LS N + G +Q + L
Sbjct: 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL-GDAGLQLLCEGLLDPQCRL 144
Query: 512 NKLILNLNQLS--GGVPL--EFGSLTELQYLDLSANKLSSSIPKSMG-----NLSKLHYL 562
KL L LS PL + + + L +S N ++ + + + + +L L
Sbjct: 145 EKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEAL 204
Query: 563 NLSNNQFNHK----IPTEFEKLIHLSELDLSHNFLQGEIPPQICNME-----SLEELNLS 613
L + + L EL L N L ++C L L +
Sbjct: 205 KLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIW 264
Query: 614 HNNLFDLIPGC------FEEMRSLSRIDIAYNELQ 642
+ GC SL + +A NEL
Sbjct: 265 ECGITA--KGCGDLCRVLRAKESLKELSLAGNELG 297
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 8e-12
Identities = 52/346 (15%), Positives = 102/346 (29%), Gaps = 68/346 (19%)
Query: 341 SSLRTLYLYDN-----GFYGLVPNEIGYLKSLSKLELCRNHLS----GVIPHSIGNLTKL 391
+++L + + L+P L+ + L L+ I ++ L
Sbjct: 3 LDIQSLDIQCEELSDARWAELLP----LLQQCQVVRLDDCGLTEARCKDISSALRVNPAL 58
Query: 392 VLVNMCENHL----FGLIPKSFRNL-TSLERLRFNQNNLFGK----VYEAFGDHPNLTFL 442
+N+ N L + + + +++L L G + P L L
Sbjct: 59 AELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQEL 118
Query: 443 DLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502
LS N L L +L+ L L +
Sbjct: 119 HLSDNLLGDA------GLQLLCEGLLDPQ-------------CRLEKLQLEYCSLSAASC 159
Query: 503 VQFEKLFSLNK----LILNLNQLSG-GVPLEFGSLTE----LQYLDLSANKLS----SSI 549
+ L ++ N ++ GV + L + L+ L L + ++ +
Sbjct: 160 EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL 219
Query: 550 PKSMGNLSKLHYLNLSNNQFNHK-----IPTEFEKLIHLSELDLSHNFLQGE----IPPQ 600
+ + + L L L +N+ P L L + + + +
Sbjct: 220 CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279
Query: 601 ICNMESLEELNLSHNNLFD-----LIPGCFEEMRSLSRIDIAYNEL 641
+ ESL+EL+L+ N L D L E L + +
Sbjct: 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 1e-11
Identities = 60/393 (15%), Positives = 121/393 (30%), Gaps = 82/393 (20%)
Query: 269 KSLFELDLSENQL-FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYIN 327
+ LD+ +L L ++ L + L T+ + +S
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGL------TEARCKDISSA----- 51
Query: 328 QLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY-LKS----LSKLELCRNHLS---- 378
+ +L L L N + + + L++ + KL L L+
Sbjct: 52 ---------LRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGC 102
Query: 379 GVIPHSIGNLTKLVLVNMCENHL-----FGLIPKSFRNLTSLERLRFNQNNLFGKVYEAF 433
GV+ ++ L L +++ +N L L LE+L+ +L E
Sbjct: 103 GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162
Query: 434 GD----HPNLTFLDLSQNNLYGEISFNW------RNFPKLGTFNASMNNI----YGSIPP 479
P+ L +S N++ E + +L + +
Sbjct: 163 ASVLRAKPDFKELTVSNNDI-NEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221
Query: 480 EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLD 539
+ + L+ L L SN + G + + L +L+ + + L+ L
Sbjct: 222 IVASKASLRELALGSNKL-GDVGMA-----ELCPGLLHPS-------------SRLRTLW 262
Query: 540 LSANKLS----SSIPKSMGNLSKLHYLNLSNNQFNHK-----IPTEFEKLIHLSELDLSH 590
+ ++ + + + L L+L+ N+ + T E L L +
Sbjct: 263 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322
Query: 591 NFLQGE----IPPQICNMESLEELNLSHNNLFD 619
+ L EL +S+N L D
Sbjct: 323 CSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 3e-09
Identities = 70/354 (19%), Positives = 117/354 (33%), Gaps = 79/354 (22%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQI------SNLSKLRALDLGNNQLSGVIPQEIG---- 146
+ P L L+LS N+L G+ Q+ +L L L LS + +
Sbjct: 109 LRTLPTLQELHLSDNLL-GDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLR 167
Query: 147 HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNN 206
+ L N ++ + + + L + L L L +
Sbjct: 168 AKPDFKELTVSNNDINEAGVRVLCQ-------GLKDSP------------CQLEALKLES 208
Query: 207 NSL----FGSIPNVMGNLNSLSILDLSQNQLRGS-----IPFSLANLSNLGILYLYKNSL 257
+ + ++ + SL L L N+L P L S L L++++ +
Sbjct: 209 CGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268
Query: 258 ----FGFIPSVIGNLKSLFELDLSENQL--FGSIPLS---FSNLSSLTLMSLFNNSLSG- 307
G + V+ +SL EL L+ N+L G+ L L + + + S +
Sbjct: 269 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 328
Query: 308 ---SIPPTQGNLEALSELGLYINQL--DGVIPPSIG---NLSSLRTLYLYDNGF------ 353
L EL + N+L GV G S LR L+L D
Sbjct: 329 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCS 388
Query: 354 ---YGLVPNEIGYLKSLSKLELCRNH--------LSGVIPHSIGNLTKLVLVNM 396
L+ N SL +L+L N L + L +LVL ++
Sbjct: 389 SLAATLLAN-----HSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDI 437
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 4e-15
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 43/273 (15%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG V A + +G A+K + L + EV + + H NI+K
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF--REVRIMKILNHPNIVKLF 80
Query: 826 GFCSNAQHSFIVSEYLDRGSL-TTI-----LKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+ +++ EY G + + +K+ A +F Q + +A+ Y H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR--Q-------IVSAVQYCH 131
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM 939
IVH D+ ++N+LLD++ ++DFG + F G YAAPE+
Sbjct: 132 QKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA-FCGAPPYAAPELF-- 185
Query: 940 MRATEKY-----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+KY DV S GV+ ++ G+ P D N + + + T
Sbjct: 186 --QGKKYDGPEVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDC 241
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+++ + LV +P R T++++
Sbjct: 242 ENLLKRF----------LVLNPIKRGTLEQIMK 264
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 4e-15
Identities = 60/284 (21%), Positives = 104/284 (36%), Gaps = 62/284 (21%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFN-SQLLFDEMADQDEFLN-EVLALTEIR----HR 819
+GKG G+V+ L + A+K +++L EV L ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRG-------SLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+I+ + + +V E + L + + FG Q V
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG--Q-------VV 149
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
A+ + H +VH DI +N+L+D A + DFG L H +T F GT Y
Sbjct: 150 AAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL--HDEPYTDFDGTRVY 204
Query: 932 AAPEIAHMMRATEKY-----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986
+ PE + +Y V S G+L +++ G+ P + + L
Sbjct: 205 SPPE----WISRHQYHALPATVWSLGILLYDMVCGDIPFE--------------RDQEIL 246
Query: 987 DHRLPTP---SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ L P S D + CL P +RP+++++
Sbjct: 247 EAELHFPAHVSPDCCALIRR-------CLAPKPSSRPSLEEILL 283
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 64/276 (23%), Positives = 99/276 (35%), Gaps = 44/276 (15%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG G G + + AVK DE + E++ +RH NI++F
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQR-----EIINHRSLRHPNIVRFK 82
Query: 826 GFCSNAQHSFIVSEYLDRGSL-TTI-----LKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
H I+ EY G L I +D A F ++ GV SY H
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFF-----QQLLSGV----SYCH 133
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAH--VSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-I 936
I H D+ +N LLD + DFG +K HS + GT Y APE +
Sbjct: 134 SMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVL 189
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP--RDYVSTNFSSFSNMITEINQNLDHRLPTP- 993
+ DV S GV ++ G +P ++ I ++ + +P
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI----LSVKYSIPDDI 245
Query: 994 --SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
S + L+S + V P R ++ ++
Sbjct: 246 RISPECCH-LISRI------FVADPATRISIPEIKT 274
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-13
Identities = 54/282 (19%), Positives = 101/282 (35%), Gaps = 60/282 (21%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFN-SQLLFDEMADQDEFLN-EVLALTEIRHR--NI 821
+G G GSVY + + A+K ++ + EV+ L ++ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 822 IKFHGFCSNAQHSFIVSEY-------LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
I+ + ++ E D + L+++ A F Q V A
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW--Q-------VLEA 161
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
+ + H+ ++H DI +N+L+D E + DFG L + +T F GT Y+
Sbjct: 162 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSP 216
Query: 934 PEIAHMMRATEKY-----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
PE +Y V S G+L +++ G+ P + + +
Sbjct: 217 PE----WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--------------HDEEIIRG 258
Query: 989 RLPTP---SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
++ S + + CL P RPT +++ N
Sbjct: 259 QVFFRQRVSSECQHLIRW-------CLALRPSDRPTFEEIQN 293
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 4e-13
Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 11/249 (4%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+ F + +GKG G V ++ +G ++A KK + + + LNE L ++
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK-GEAMALNEKQILEKV 241
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
R ++ +V ++ G L + F + + + L
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH-MGQAGFPEARAVFYAAEICCGLE 300
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
LH + IV+ D+ +N+LLD +SD G+A + + GT GY APE+
Sbjct: 301 DLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG-RVGTVGYMAPEV 356
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP---RDYVSTNFSSFSNMITEINQNLDHRLPTP 993
R T D + G L E+I G P R ++ E+ + R
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK-KKIKREEVERLVKEVPEEYSERFSPQ 415
Query: 994 SRDVMDKLM 1002
+R + +L+
Sbjct: 416 ARSLCSQLL 424
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 7e-13
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 30/220 (13%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+DF +G+G +V A EL + +A+K + + + E ++ +
Sbjct: 29 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRL 87
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-----DDAAAK----EFGWNQRMNV 867
H +K + + + + Y G L ++ D+ + E
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 138
Query: 868 IKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA-- 924
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A
Sbjct: 139 ---IVSALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 191
Query: 925 FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
F GT Y +PE+ A + D+ + G + +++ G P
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 9e-13
Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 36/272 (13%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V A + AVK + + D + + E+ + H N++KF+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIK--KEICINKMLNHENVVKFY 71
Query: 826 GFCSNAQHSFIVSEYLDRGSL-TTI-----LKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
G ++ EY G L I + + A + F +Q ++ GV YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQ---LMAGV----VYLH 122
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPE-I 936
I H DI +N+LLD +SDFG+A ++ GT Y APE +
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD-HRLPTPSR 995
E DV S G++ ++ G P D S + +S+ + ++ +
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
++ K+ LVE+P AR T+ +
Sbjct: 240 ALLHKI----------LVENPSARITIPDIKK 261
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 9e-13
Identities = 44/222 (19%), Positives = 81/222 (36%), Gaps = 32/222 (14%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D+ IG+G G V + ++A+K + + + +D F E +
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFA 126
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK----DDAAAK----EFGWNQRMNVI 868
+++ + ++ ++V EY+ G L ++ + A+ E
Sbjct: 127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAE---------- 176
Query: 869 KGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT-AFA 926
V AL +H +H D+ N+LLD ++DFG +N
Sbjct: 177 --VVLALDAIHSMG----FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 927 GTFGYAAPEIAHMMRATEKYDVH----SFGVLALEVIKGNHP 964
GT Y +PE+ Y S GV E++ G+ P
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 1e-12
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V + + AVK + L + E+ L +RH+N+I+
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 826 GFCSNA--QHSFIVSEYLDRGS---LTTI----LKDDAAAKEFGWNQRMNVIKGVANALS 876
N Q ++V EY G L ++ A F Q + + L
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF--CQ-------LIDGLE 123
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGTFGYAAP 934
YLH IVH DI N+LL + +S G+A+ L+P +++ T G+ + P
Sbjct: 124 YLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 935 EIAHMMRATEKY-----DVHSFGV 953
EIA + + D+ S GV
Sbjct: 181 EIA---NGLDTFSGFKVDIWSAGV 201
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 1e-12
Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 8/249 (3%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
D F + +G+G G V+ ++ +G ++A KK N + L + E L ++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK-GYQGAMVEKKILAKV 242
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTT-ILKDDAAAKEFGWNQRMNVIKGVANAL 875
R I+ +V ++ G + I D F + + + + L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+LH I++ D+ +NVLLD + +SD G+A L + +AGT G+ APE
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP--RDYVSTNFSSFSNMITEINQNLDHRLPTP 993
+ D + GV E+I P + E +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 994 SRDVMDKLM 1002
S+D + L+
Sbjct: 420 SKDFCEALL 428
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 2e-12
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSG---GVPLEFGSL 532
S+P I S L+L SN + F+KL L KL L+ NQ+ GV F L
Sbjct: 21 SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV---FDKL 75
Query: 533 TELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
T+L L L NKL S+P + L++L L L NQ F++L L ++ L N
Sbjct: 76 TKLTILYLHENKL-QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 2e-12
Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP---FSLANLSNLGILYLYKNSL 257
L L +N L V L L+ L LSQNQ++ S+P F L+ L ILYL++N L
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFD--KLTKLTILYLHENKL 88
Query: 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNN 303
V L L EL L NQL S+P F L+SL + L N
Sbjct: 89 QSLPNGVFDKLTQLKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 4e-12
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 249 ILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSLSG 307
L L N L V L L +L LS+NQ+ S+P F L+ LT++ L N L
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQI-QSLPDGVFDKLTKLTILYLHENKLQ- 89
Query: 308 SIPPTQG---NLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDN 351
S+P G L L EL L NQL V L+SL+ ++L+ N
Sbjct: 90 SLPN--GVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-11
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
+L L N+L F LT+L L LS N++ S L+KL L L N+
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL-QS 90
Query: 573 IPTE-FEKLIHLSELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNLFD 619
+P F+KL L EL L N L+ +P I + SL+++ L H N +D
Sbjct: 91 LPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWL-HTNPWD 137
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 8e-10
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592
+ L+L +NKL S L++L L+LS NQ F+KL L+ L L N
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87
Query: 593 LQGEIPPQIC-NMESLEELNLSHNNLFDLIPGCFEEMRSLSRI 634
LQ +P + + L+EL L N L + G F+ + SL +I
Sbjct: 88 LQ-SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKI 129
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 9e-08
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 28/128 (21%)
Query: 130 LDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRI 189
L+L +N+L + LT L L N + S+P + F
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGV---------------FD--- 73
Query: 190 PPSLGNLSNLAYLYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQLRGSIPF-SLANLSNL 247
L+ L LYL+ N L S+PN V L L L L NQL+ S+P L++L
Sbjct: 74 -----KLTKLTILYLHENKL-QSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSL 126
Query: 248 GILYLYKN 255
++L+ N
Sbjct: 127 QKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 8e-06
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 10/119 (8%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL----SGVIPHSIGNL 388
+P I SS L L N L L L+KL L +N + GV L
Sbjct: 22 VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDK----L 75
Query: 389 TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQN 447
TKL ++ + EN L L F LT L+ L + N L F +L + L N
Sbjct: 76 TKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 561 YLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICN-MESLEELNLSHNNLFD 619
L L +N+ F+KL L++L LS N +Q +P + + + L L L N L
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQS 90
Query: 620 LIPGCFEEMRSLSRIDIAYNELQ 642
L G F+++ L + + N+L+
Sbjct: 91 LPNGVFDKLTQLKELALDTNQLK 113
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-12
Identities = 45/220 (20%), Positives = 82/220 (37%), Gaps = 45/220 (20%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLN----------------- 808
IGKG G V A +A+K + + L +
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 809 -----EVLALTEIRHRNIIKFHG--FCSNAQHSFIVSEYLDRGSLTTI-----LKDDAAA 856
E+ L ++ H N++K N H ++V E +++G + + L +D A
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 857 KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916
F + + + YLH+ I+H DI N+L+ + ++DFG++
Sbjct: 141 FYF---------QDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 917 PHSSNWTAFAGTFGYAAPEI---AHMMRATEKYDVHSFGV 953
+ + GT + APE + + + DV + GV
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGV 228
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 2e-12
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 24/197 (12%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFN-SQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V E +G AVK N ++ ++ + + E+ L RH +IIK
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHIIKL 76
Query: 825 HGFCSNAQHSFIVSEYLDRGSL------TTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
+ S F+V EY+ G L +++ A + F + + +A+ Y
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF---------QQILSAVDYC 127
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IA 937
H +VH D+ +NVLLD+ A ++DFG++ ++ T G+ YAAPE I+
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEVIS 183
Query: 938 HMMRATEKYDVHSFGVL 954
+ A + D+ S GV+
Sbjct: 184 GRLYAGPEVDIWSCGVI 200
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 3e-12
Identities = 52/255 (20%), Positives = 100/255 (39%), Gaps = 23/255 (9%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEF-LNE--VLAL 813
++DF IG+G G VY +G ++A+K + + + + + LNE +L+L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK--QGETLALNERIMLSL 245
Query: 814 T-EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
I+ + + ++ G L L F +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEII 302
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
L ++H+ +V+ D+ N+LLD +SD G+A + + A GT GY
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH--ASVGTHGYM 357
Query: 933 APEIAHMMRATEKYDVH----SFGVLALEVIKGNHP-RDYVSTNFSSFSNMITEINQNLD 987
APE+ ++ YD S G + ++++G+ P R + + + M + L
Sbjct: 358 APEV---LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 414
Query: 988 HRLPTPSRDVMDKLM 1002
R +++ L+
Sbjct: 415 DSFSPELRSLLEGLL 429
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 3e-12
Identities = 67/392 (17%), Positives = 117/392 (29%), Gaps = 90/392 (22%)
Query: 241 LANLSNLGILYLYKNSL----FGFIPSVIGNLKSLFELDLSENQL-------FGSIPLSF 289
+A S G L +++ + +V+ S+ E+ LS N + S
Sbjct: 1 MARFSIEG-KSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASK 59
Query: 290 SNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLY 349
+L +F + IP L L + ++ L T+ L
Sbjct: 60 KDLEIAEFSDIFTGRVKDEIPE---ALRLLLQ--------------ALLKCPKLHTVRLS 102
Query: 350 DNGFYGLVPNEIGYL----KSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI 405
DN F + L L L N L P + + + +
Sbjct: 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG---PQAGAKIARALQELAVN------- 152
Query: 406 PKSFRNLTSLERLRFNQNNLFGK----VYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFP 461
K +N L + +N L + F H L + + QN + E
Sbjct: 153 -KKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE--------- 202
Query: 462 KLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-----FEKLFSLNKLIL 516
G + + + +L+VLDL N + + +L +L L
Sbjct: 203 --GIEHL--------LLEGLAYCQELKVLDLQDNTF-THLGSSALAIALKSWPNLRELGL 251
Query: 517 NLNQLS--GGVP----LEFGSLTELQYLDLSANKLS----SSIPKSMG-NLSKLHYLNLS 565
N LS G LQ L L N++ ++ + + L +L L+
Sbjct: 252 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELN 311
Query: 566 NNQFN------HKIPTEFEKLIHLSELDLSHN 591
N+F+ +I F +L
Sbjct: 312 GNRFSEEDDVVDEIREVFSTRGRGELDELDDM 343
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 1e-10
Identities = 49/336 (14%), Positives = 99/336 (29%), Gaps = 81/336 (24%)
Query: 342 SLRTLYLYDNGFYGLVPNEIGYL-------KSLSKLELCRNHLSGVIPHSIG-------N 387
S+ L + + + + S+ ++ L N + + +
Sbjct: 5 SIEGKSLKLDA---ITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKD 61
Query: 388 LTKLVLVNMCENHLFGLIPKSFRNL-------TSLERLRFNQNNLFGK----VYEAFGDH 436
L ++ + IP++ R L L +R + N + + H
Sbjct: 62 LEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKH 121
Query: 437 PNLTFLDLSQNNL-------------YGEISFNWRNFPKLGTFNASMNNIYG----SIPP 479
L L L N L ++ +N P L + N +
Sbjct: 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181
Query: 480 EIGDSSKLQVLDLSSNHIVGK-IPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYL 538
L + + N I + I + + EL+ L
Sbjct: 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC--------------------QELKVL 221
Query: 539 DLSANKLS----SSIPKSMGNLSKLHYLNLSNNQFNHK----IPTEFEKLIH--LSELDL 588
DL N + S++ ++ + L L L++ + + + F KL + L L L
Sbjct: 222 DLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281
Query: 589 SHNFLQGEIPPQIC-----NMESLEELNLSHNNLFD 619
+N ++ + + M L L L+ N +
Sbjct: 282 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 1e-09
Identities = 41/280 (14%), Positives = 76/280 (27%), Gaps = 60/280 (21%)
Query: 405 IPKSFRNLTSLERLRFNQNNLFGK-----VYEAFGDHPNLTFLDLSQNNLYGEISFNWRN 459
+ S++ + + N + G + E +L + S
Sbjct: 24 VFAVLLEDDSVKEIVLSGNTI-GTEAARWLSENIASKKDLEIAEFSDIFT---------- 72
Query: 460 FPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNK----LI 515
G + + + KL + LS N S + L
Sbjct: 73 ----GRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLY 128
Query: 516 LNLNQLS--GGVPL-----------EFGSLTELQYLDLSANKLS----SSIPKSMGNLSK 558
L+ N L G + + + L+ + N+L K+ +
Sbjct: 129 LHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL 188
Query: 559 LHYLNLSNNQFNHK-----IPTEFEKLIHLSELDLSHNFLQGE----IPPQICNMESLEE 609
LH + + N + + L LDL N + + + +L E
Sbjct: 189 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE 248
Query: 610 LNLSHNNLFDLIPGCFE--------EMRSLSRIDIAYNEL 641
L L+ L G E L + + YNE+
Sbjct: 249 LGLNDCLLSA--RGAAAVVDAFSKLENIGLQTLRLQYNEI 286
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 4e-08
Identities = 45/291 (15%), Positives = 93/291 (31%), Gaps = 61/291 (20%)
Query: 121 ISNLSKLRALDLGNNQLSG----VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIG------ 170
+ ++ + L N + + + I L + F G + EI
Sbjct: 28 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFT-GRVKDEIPEALRLL 86
Query: 171 -----KLSLINVLTLCHNNFSGR----IPPSLGNLSNLAYLYLNNNSL------------ 209
K ++ + L N F + L + L +LYL+NN L
Sbjct: 87 LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARAL 146
Query: 210 -FGSIPNVMGNLNSLSILDLSQNQLR--GSIPFS--LANLSNLGILYLYKNSLF-----G 259
++ N L + +N+L ++ + L + + +N +
Sbjct: 147 QELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEH 206
Query: 260 FIPSVIGNLKSLFELDLSENQL--FGSIPLS--FSNLSSLTLMSLFNN--------SLSG 307
+ + + L LDL +N GS L+ + +L + L + ++
Sbjct: 207 LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266
Query: 308 SIPPTQGNLEALSELGLYINQLDGVIPPSIG-----NLSSLRTLYLYDNGF 353
+ ++ L L L N+++ ++ + L L L N F
Sbjct: 267 AF--SKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 6e-07
Identities = 46/267 (17%), Positives = 81/267 (30%), Gaps = 50/267 (18%)
Query: 57 ANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGN 116
A+ + + IF V I +L L + P L + LS N
Sbjct: 57 ASKKDLEIAEFSDIFTGRVKDEIPEALRLLL-------QALLKCPKLHTVRLSDNAFGPT 109
Query: 117 ----IPPQISNLSKLRALDLGNNQLS-------------GVIPQEIGHLTCLRMLYFDVN 159
+ +S + L L L NN L + ++ + LR + N
Sbjct: 110 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 169
Query: 160 HLH--GSIPL--EIGKLSLINVLTLCHNNF-----SGRIPPSLGNLSNLAYLYLNNNSLF 210
L L++ + + N + L L L L +N+ F
Sbjct: 170 RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT-F 228
Query: 211 G-----SIPNVMGNLNSLSILDLSQNQLR--GSIPFS--LANLSN--LGILYLYKNSL-- 257
++ + + +L L L+ L G+ + L N L L L N +
Sbjct: 229 THLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288
Query: 258 ---FGFIPSVIGNLKSLFELDLSENQL 281
+ + L L+L+ N+
Sbjct: 289 DAVRTLKTVIDEKMPDLLFLELNGNRF 315
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 5e-06
Identities = 21/131 (16%), Positives = 40/131 (30%), Gaps = 22/131 (16%)
Query: 509 FSLNKLILNLNQLS--GGVPL--EFGSLTELQYLDLSANKLS----SSIPKSMGNLSKLH 560
FS+ L L+ ++ + ++ + LS N + + +++ + L
Sbjct: 4 FSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLE 63
Query: 561 YLNLSNNQFNHKIPTEFE----------KLIHLSELDLSHNFLQGE----IPPQICNMES 606
S+ E K L + LS N + +
Sbjct: 64 IAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTP 123
Query: 607 LEELNLSHNNL 617
LE L L +N L
Sbjct: 124 LEHLYLHNNGL 134
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 3e-12
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQ--FEKLFSLNKLILNLNQLSG---GVPLEFG 530
IP +I + L L+ N + +I F +L L KL L NQL+G F
Sbjct: 22 EIPRDIPLHT--TELLLNDNELG-RISSDGLFGRLPHLVKLELKRNQLTGIEPNA---FE 75
Query: 531 SLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDL 588
+ +Q L L NK+ I M L +L LNL +NQ + + FE L L+ L+L
Sbjct: 76 GASHIQELQLGENKI-KEISNKMFLGLHQLKTLNLYDNQIS-CVMPGSFEHLNSLTSLNL 133
Query: 589 SHN 591
+ N
Sbjct: 134 ASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 4e-11
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 471 NNIYGSIPPE-IGDS-SKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLS---GG 524
+N G I + + L L+L N + I FE + +L L N++
Sbjct: 38 DNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGENKIKEISNK 96
Query: 525 VPLEFGSLTELQYLDLSANKLSSSIPK-SMGNLSKLHYLNLSNNQFN 570
+ F L +L+ L+L N++S + S +L+ L LNL++N FN
Sbjct: 97 M---FLGLHQLKTLNLYDNQISC-VMPGSFEHLNSLTSLNLASNPFN 139
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 6e-11
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 225 ILDLSQNQLRGSIPFSL-ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFG 283
L L+ N+L L L +L L L +N L G P+ + EL L EN++
Sbjct: 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI-K 91
Query: 284 SIPL-SFSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQLD 330
I F L L ++L++N +S + P G +L +L+ L L N +
Sbjct: 92 EISNKMFLGLHQLKTLNLYDNQIS-CVMP--GSFEHLNSLTSLNLASNPFN 139
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 4e-10
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 35/142 (24%)
Query: 165 IPLEIGKLSLINVLTLCHNNFSGRIPPS--LGNLSNLAYLYLNNNSLFGSIPNVMGNLNS 222
IPL +L L ++N GRI G L +L L L N L G PN +
Sbjct: 27 IPLHTTELLL-------NDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH 79
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
+ L L +N+++ I + L L L+L +NQ+
Sbjct: 80 IQELQLGENKIK-EIS-----------------------NKMFLGLHQLKTLNLYDNQI- 114
Query: 283 GSIPL-SFSNLSSLTLMSLFNN 303
+ SF +L+SLT ++L +N
Sbjct: 115 SCVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 9e-10
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 533 TELQYLDLSANKLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSH 590
L L+ N+L + G L L L L NQ I FE H+ EL L
Sbjct: 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGE 87
Query: 591 NFLQGEIPPQICN-MESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639
N ++ EI ++ + L+ LNL N + ++PG FE + SL+ +++A N
Sbjct: 88 NKIK-EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 344 RTLYLYDNGFYGLVPNEI-GYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLF 402
L L DN + + + G L L KLEL RN L+G+ P++ + + + + EN +
Sbjct: 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91
Query: 403 GLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQN 447
+ K F L L+ L N + + +F +LT L+L+ N
Sbjct: 92 EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 34/157 (21%), Positives = 49/157 (31%), Gaps = 59/157 (37%)
Query: 105 YLNLSCNVLYGNIPPQ--ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLH 162
L L+ N L G I L L L+L NQL+G I F+
Sbjct: 33 ELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTG-IEPNA----------FE----- 75
Query: 163 GSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN-VMGNLN 221
S++ L L N + I N + L+
Sbjct: 76 --------------------------------GASHIQELQLGENKI-KEISNKMFLGLH 102
Query: 222 SLSILDLSQNQLRGSIP---FSLANLSNLGILYLYKN 255
L L+L NQ+ + F +L++L L L N
Sbjct: 103 QLKTLNLYDNQIS-CVMPGSF--EHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 8e-06
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 561 YLNLSNNQFNHKIPTE--FEKLIHLSELDLSHNFLQGEIPPQIC-NMESLEELNLSHNNL 617
L L++N+ +I ++ F +L HL +L+L N L I P ++EL L N +
Sbjct: 33 ELLLNDNELG-RISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGENKI 90
Query: 618 FDLIPGCFEEMRSLSRIDIAYNELQ 642
++ F + L +++ N++
Sbjct: 91 KEISNKMFLGLHQLKTLNLYDNQIS 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 68.2 bits (166), Expect = 3e-12
Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHNFLQGEIPPQI 601
+ + L L + N Q + L L L + + L+ + P
Sbjct: 17 RDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDA 75
Query: 602 -CNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
L LNLS N L L + + SL + ++ N L
Sbjct: 76 FHFTPRLSRLNLSFNALESLSWKTVQGL-SLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 61.7 bits (149), Expect = 4e-10
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 501 IPVQFEKLFSLNKLILNLNQLSGGVPLE-FGSLTELQYLDLSANKLSSSIPKSMGNLSKL 559
+L +L + Q + L L EL+ L + + L P + +L
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL 82
Query: 560 HYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
LNLS N + L L EL LS N L
Sbjct: 83 SRLNLSFNALESLSWKTVQGL-SLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 61.7 bits (149), Expect = 4e-10
Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 2/96 (2%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIP-VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTE 534
+ + L L + + + + L L L + + L P F
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L L+LS N L S K++ LS L L LS N +
Sbjct: 82 LSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 5e-10
Identities = 25/126 (19%), Positives = 37/126 (29%), Gaps = 26/126 (20%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQLRGSIPF 239
C + + L NL LY+ N + + L L L + ++ LR +
Sbjct: 15 CTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVA- 72
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMS 299
P L L+LS N L + L SL +
Sbjct: 73 ----------------------PDAFHFTPRLSRLNLSFNALESLSWKTVQGL-SLQELV 109
Query: 300 LFNNSL 305
L N L
Sbjct: 110 LSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 56.3 bits (135), Expect = 2e-08
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 566 NNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ-ICNMESLEELNLSHNNLFDLIPGC 624
+L+EL + + + + + + L L + + L + P
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75
Query: 625 FEEMRSLSRIDIAYNELQ 642
F LSR+++++N L+
Sbjct: 76 FHFTPRLSRLNLSFNALE 93
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 1e-07
Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 24/117 (20%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+ +L LY+ + HL + + L +L
Sbjct: 23 SLHHLPGAENLTELYIENQ-----------------------QHLQHLELRDLRGLGELR 59
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
+ + ++ L + P +F L RL + N L ++ +L L LS N L
Sbjct: 60 NLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTV-QGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 9e-07
Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 28/121 (23%)
Query: 116 NIPPQISNLSKLRALDLGNNQLSGVIPQE-IGHLTCLRMLYFDVNHLHGSIPLEIGKLSL 174
+ + L L + N Q + + L LR L
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLT------------------- 62
Query: 175 INVLTLCHNNFSGRIPP-SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQL 233
+ + + P + L+ L L+ N+L + L SL L LS N L
Sbjct: 63 -----IVKSGLR-FVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGL-SLQELVLSGNPL 115
Query: 234 R 234
Sbjct: 116 H 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 2e-06
Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 6/105 (5%)
Query: 397 CENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV-YEAFGDHPNLTFLDLSQNNLY--GEI 453
C +L L + L L + ++ L
Sbjct: 15 CTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74
Query: 454 SFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIV 498
+F P+L N S N + S+ + LQ L LS N +
Sbjct: 75 AF--HFTPRLSRLNLSFNAL-ESLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 2e-06
Identities = 21/100 (21%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSI 337
+LT + + N + L L L + + L V P +
Sbjct: 17 RDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF 76
Query: 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL 377
L L L N L + L SL +L L N L
Sbjct: 77 HFTPRLSRLNLSFNALESLSWKTVQGL-SLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 2e-05
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Query: 302 NNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP-SIGNLSSLRTLYLYDNGFYGLVPNE 360
+ E L+EL + Q + + L LR L + +G + P+
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLT 389
+ LS+L L N L + ++ L+
Sbjct: 76 FHFTPRLSRLNLSFNALESLSWKTVQGLS 104
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 5e-05
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQ-ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRML 154
+L L + ++ + + L +LR L + + L V P L L
Sbjct: 26 HLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRL 85
Query: 155 YFDVNHLHGSIPLEIGKLSLINVLTLCHNNF 185
N L + LSL L L N
Sbjct: 86 NLSFNALESLSWKTVQGLSL-QELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 2e-04
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 8/87 (9%)
Query: 82 SLSSLGLNG-----TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNN 135
+L+ L + + L L + + L + P +L L+L N
Sbjct: 32 NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL-RFVAPDAFHFTPRLSRLNLSFN 90
Query: 136 QLSGVIPQEIGHLTCLRMLYFDVNHLH 162
L + + + L+ L+ L N LH
Sbjct: 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 5e-12
Identities = 54/231 (23%), Positives = 84/231 (36%), Gaps = 45/231 (19%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDE---FLNEVLAL 813
DDF IG+G V ++ +G ++A+K N +M + E F E L
Sbjct: 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNK----WDMLKRGEVSCFREERDVL 115
Query: 814 TEIRHRNIIKFHGFCS--NAQHSFIVSEYLDRGSLTTILK------DDAAAK----EFGW 861
R I + H + + + ++V EY G L T+L A+ E
Sbjct: 116 VNGDRRWITQLH--FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAE--- 170
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
+ A+ +H VH DI N+LLD ++DFG L +
Sbjct: 171 ---------IVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Query: 922 WTA-FAGTFGYAAPEIAHMMRATEKYDVH-------SFGVLALEVIKGNHP 964
+ GT Y +PEI + + + GV A E+ G P
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 7e-12
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 24/179 (13%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V A + AVK + + D + + E+ + H N++KF+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIK--KEICINKMLNHENVVKFY 71
Query: 826 GFCSNAQHSFIVSEYLDRGSL-TTI-----LKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
G ++ EY G L I + + A + F +Q ++ GV YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQ---LMAGV----VYLH 122
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPEI 936
I H DI +N+LLD +SDFG+A ++ GT Y APE+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 2e-11
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G V + +G AVK N Q + + + E+ L RH +IIK +
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKI-RSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Query: 826 GFCSNAQHSFIVSEYLDRGSL------TTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
S F+V EY+ G L L + + + F + + + + Y H
Sbjct: 83 QVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLF---------QQILSGVDYCH 133
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
+VH D+ +NVLLD+ A ++DFG++ ++ T G+ YAAPE+
Sbjct: 134 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEV 186
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 2e-11
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 28/192 (14%)
Query: 763 EKYCIGKGRQGSVYKA---ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
E +G+G G VYKA + +A+K+ + E+ L E++H
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI------SMSACREIALLRELKHP 78
Query: 820 NIIKFHG-FCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN--VIKGVA--- 872
N+I F S+A +++ +Y + L I+K A+K ++ ++K +
Sbjct: 79 NVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI 137
Query: 873 -NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH----VSDFGIAKFLNPHSSNWTAFAG 927
+ + YLH + ++H D+ N+L+ E ++D G A+ N
Sbjct: 138 LDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP 194
Query: 928 ---TFGYAAPEI 936
TF Y APE+
Sbjct: 195 VVVTFWYRAPEL 206
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 13/209 (6%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
YLH D +++ D+ +N+L+D + V+DFG AK + WT GT APE
Sbjct: 156 YLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEALAPE 208
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
I + D + GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 3e-11
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 21/195 (10%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V A + A+K + QLL + E+ L +RH +IIK +
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLL-KKSDMHMRVEREISYLKLLRHPHIIKLY 75
Query: 826 GFCSNAQHSFIVSEY-----LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
+ +V EY D + +D + F + + A+ Y H
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFF---------QQIICAIEYCHR 126
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHM 939
IVH D+ +N+LLD ++DFG++ + + T G+ YAAPE I
Sbjct: 127 HK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVINGK 182
Query: 940 MRATEKYDVHSFGVL 954
+ A + DV S G++
Sbjct: 183 LYAGPEVDVWSCGIV 197
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 5e-11
Identities = 51/246 (20%), Positives = 97/246 (39%), Gaps = 9/246 (3%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F +GKG G V + +G +A+K +++ + + L E L
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKD-EVAHTLTENRVLQNS 205
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
RH + V EY + G L L + + F ++ + +AL
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALD 262
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH + +V+ D+ +N++LD + ++DFG+ K + F GT Y APE+
Sbjct: 263 YLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 320
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
D GV+ E++ G P + + + +I L ++
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLFELILMEEIRFPRTLGPEAKS 378
Query: 997 VMDKLM 1002
++ L+
Sbjct: 379 LLSGLL 384
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 6e-11
Identities = 54/227 (23%), Positives = 86/227 (37%), Gaps = 39/227 (17%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+DF IG+G G V +L + +FA+K N + + A+ F E L
Sbjct: 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-KRAETACFREERDVLVNG 131
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------DDAAAK----EFGWNQRMN 866
+ I H + + ++V +Y G L T+L + A+ E
Sbjct: 132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE-------- 183
Query: 867 VIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNWT 923
+ A+ +H VH DI N+L+D H+ +DFG L + +
Sbjct: 184 ----MVIAIDSVHQLH----YVHRDIKPDNILMDM--NGHIRLADFGSCLKLMEDGTVQS 233
Query: 924 A-FAGTFGYAAPEI-AHMMRATEKYDVH----SFGVLALEVIKGNHP 964
+ GT Y +PEI M +Y S GV E++ G P
Sbjct: 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 9e-11
Identities = 63/275 (22%), Positives = 106/275 (38%), Gaps = 44/275 (16%)
Query: 746 NGKFLYEEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM 800
+ +F E+ + ++Y IG G QG V A + A+KK + F
Sbjct: 45 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--PFQNQ 102
Query: 801 ADQDEFLNEVLALTEIRHRNIIKFH------GFCSNAQHSFIVSEYLDRGSLTTILK--- 851
E++ + + H+NII Q ++V E +D +L +++
Sbjct: 103 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMEL 161
Query: 852 DDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911
D + Q + IK +LH I+H D+ N+++ S+ + DFG+
Sbjct: 162 DHERMSYLLY-QMLCGIK-------HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210
Query: 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN---HPRDYV 968
A+ S T + T Y APE+ M E D+ S G + E+++ RDY+
Sbjct: 211 ARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 969 STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
N + E L TP + M KL
Sbjct: 270 DQ-----WNKVIEQ-------LGTPCPEFMKKLQP 292
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 4e-10
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 37/215 (17%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-F 824
G+G G+V E +G+ A+KK + + ++ L + L + H NI++
Sbjct: 31 AGQGTFGTVQLGKEKSTGMSVAIKK-----VIQDPRFRNRELQIMQDLAVLHHPNIVQLQ 85
Query: 825 HGFCSNAQHSF------IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV--IKG----VA 872
F + + +V EY+ +L ++ IK +
Sbjct: 86 SYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRR-----QVAPPPILIKVFLFQLI 139
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLD-SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
++ LH + + H DI NVL++ ++ + DFG AK L+P N A+ + Y
Sbjct: 140 RSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN-VAYICSRYY 197
Query: 932 AAPEIAHMMRATEKY----DVHSFG-VLALEVIKG 961
APE+ + Y D+ S G + A E++ G
Sbjct: 198 RAPEL--IFGNQH-YTTAVDIWSVGCIFA-EMMLG 228
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 4e-10
Identities = 66/275 (24%), Positives = 106/275 (38%), Gaps = 44/275 (16%)
Query: 746 NGKFLYEEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM 800
+ F EI + ++Y IG G QG V A + A+KK + F
Sbjct: 8 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--PFQNQ 65
Query: 801 ADQDEFLNEVLALTEIRHRNIIK-FHGFCSNAQHS-----FIVSEYLDRGSLTTILK--- 851
E++ + + H+NII + F +IV E +D +L +++
Sbjct: 66 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMEL 124
Query: 852 DDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911
D + Q + IK +LH I+H D+ N+++ S+ + DFG+
Sbjct: 125 DHERMSYLLY-QMLCGIK-------HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 173
Query: 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN---HPRDYV 968
A+ S T + T Y APE+ M E D+ S G + E+IKG D++
Sbjct: 174 ARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 232
Query: 969 STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
N + E L TP + M KL
Sbjct: 233 DQ-----WNKVIEQ-------LGTPCPEFMKKLQP 255
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 5e-10
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 43/215 (20%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-F 824
IG G G VY+A+L SG + A+KK + D+ E+ + ++ H NI++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 825 HGFCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKG----VAN 873
+ F S+ + +V +Y+ ++ + + + AK Q + +K +
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKLYMYQLFR 167
Query: 874 ALSYLH-HDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
+L+Y+H I H DI +N+LLD + + DFG AK L N ++ + Y
Sbjct: 168 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-VSYICSRYY 222
Query: 932 AAPEIAHMMRATEKY----DVHSFG-VLALEVIKG 961
APE+ + AT+ Y DV S G VLA E++ G
Sbjct: 223 RAPEL--IFGATD-YTSSIDVWSAGCVLA-ELLLG 253
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 5e-10
Identities = 89/632 (14%), Positives = 166/632 (26%), Gaps = 206/632 (32%)
Query: 385 IGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAF---GDHPNLTF 441
+ ++ K +L +H+ L L Q + + F N F
Sbjct: 38 VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE----MVQKFVEEVLRINYKF 93
Query: 442 LDLSQNNLYGEISFNWRNFPKLGT--FNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499
L I R P + T + + +Y +K V
Sbjct: 94 L-------MSPIKTEQRQ-PSMMTRMYIEQRDRLYNDNQV----FAKYNV---------- 131
Query: 500 KIPVQFEKLFSLNKLILNLNQLSGGVPLE----FGSLTELQYLDLSANKLSS-SIPKSMG 554
+ + L + +L L + V ++ G ++ + S + M
Sbjct: 132 ---SRLQPYLKLRQALLELRP-AKNVLIDGVLGSGKTW------VALDVCLSYKVQCKMD 181
Query: 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICN--MESLEEL-- 610
K+ +LNL N + +KL++ + + + + L L
Sbjct: 182 F--KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 611 ---------------NLSHNNLFDLIPGCFEEMRSL--SR----IDIAYNELQGPIPNST 649
N N F+L C + L +R D I
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNL--SC----KILLTTRFKQVTDFLSAATTTHIS-LD 292
Query: 650 AFKDGLMEGN-KGLCGNF-----KALPSCDAFMSHEQTSRKKWVVIVFPILGMVVLLIGL 703
L K L + + LP E V+ P + +
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLP-------RE-------VLTTNP------RRLSI 332
Query: 704 FGFFL--------FFGQRKRD--------------SQEKRRTFFGPKATDDFG----D-- 735
+ + D E R+ F D
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF------DRLSVFPPSAH 386
Query: 736 -PFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQ 794
P S++ F+ +++ ++ + + K + S +PS
Sbjct: 387 IPTILLSLIWFDVI--KSDVMVVVNKLHKYSLVEKQPKESTI--SIPSI----------Y 432
Query: 795 LLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ---------HSFIV-----SEY 840
L + + L+ + + H NI K F S+ +S I E+
Sbjct: 433 LELKVKLENEYALHRSI----VDHYNIPK--TFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486
Query: 841 LDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899
+R +L + D F + ++ K + HD G I N L
Sbjct: 487 PERMTLFRMVFLD------FRFLEQ----K--------IRHDSTAWNASGSIL--NTLQQ 526
Query: 900 SE-HEAHVSD---------FGIAKFLNPHSSN 921
+ ++ ++ D I FL N
Sbjct: 527 LKFYKPYICDNDPKYERLVNAILDFLPKIEEN 558
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 5e-08
Identities = 57/342 (16%), Positives = 111/342 (32%), Gaps = 93/342 (27%)
Query: 13 LLLTFSYNVSS--DSTKESYALLNWKTSLQNQNPNSSLLSSWT------LYPANATKISP 64
LL T V+ + ++ L+ + + SLL + L P +P
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL-PREVLTTNP 327
Query: 65 --------------CTWFG---IFCNLVGRVISISLSSLG---LNGTFQDFSFSSFP--- 101
TW + C+ + +I SL+ L F S FP
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV--FPPSA 385
Query: 102 HLMYLNLSCNVLYGNIPPQ-----ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156
H+ + LS +++ ++ ++ L K ++ + + IP +Y
Sbjct: 386 HIPTILLS--LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP----------SIYL 433
Query: 157 DVNH-------LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGN--LSNLAY-LY-LN 205
++ LH SI + ++ T ++ PP L S++ + L +
Sbjct: 434 ELKVKLENEYALHRSI---VDHYNIP--KTFDSDDLI---PPYLDQYFYSHIGHHLKNIE 485
Query: 206 NNSLFGSIPNVMGNLNSLSILDLS--QNQLRGS-----IPFSLANLSNLGILYLYKNSLF 258
+ V LD + ++R S+ N L L YK +
Sbjct: 486 HPERMTLFRMVF--------LDFRFLEQKIRHDSTAWNASGSILNT--LQQLKFYKPYIC 535
Query: 259 GFIPSVIGNLKSL--FELDLSENQLFGSIPLSFSNLSSLTLM 298
P + ++ F + EN + +++L + LM
Sbjct: 536 DNDPKYERLVNAILDFLPKIEENLICS----KYTDLLRIALM 573
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 2e-07
Identities = 82/554 (14%), Positives = 156/554 (28%), Gaps = 164/554 (29%)
Query: 68 FGIFC----NLVGRVISISLSSLGLNGTFQDFSF-----------SSFPHLMYLNLSCNV 112
F +V + + L ++ F S MY+ +
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLR--------INYKFLMSPIKTEQRQPSMMTRMYIE-QRDR 118
Query: 113 LYGNIPP----QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLE 168
LY + +S L L L + P + + + G L
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKL---RQALLELRPAKN--VL-----------IDG--VLG 160
Query: 169 IGKLSLINVLTLC-----HNNFSGRIP-PSLGN-------LSNLAYLYLNNNSLFGSIPN 215
GK + L +C +I +L N L L L + + S +
Sbjct: 161 SGKTWV--ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 216 VMGNL---------------------NSLSILDLSQNQLRGSIPFSLANLSNLG--ILYL 252
N+ N L +L QN N NL IL
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA-------KAWNAFNLSCKILLT 271
Query: 253 YKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPP- 311
+ V L + +S + ++ + +L+ + + +P
Sbjct: 272 TRFK------QVTDFLSAATTTHISLDHH----SMTLTPDEVKSLLLKYLDCRPQDLPRE 321
Query: 312 -TQGNLEALSELG-------------LYIN--QLDGVIPPSIGNLSS--LRTLY------ 347
N LS + ++N +L +I S+ L R ++
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381
Query: 348 -------------LYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLV 394
++ + V + L S +E + S + SI K+ L
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE-KQPKESTISIPSIYLELKVKLE 440
Query: 395 NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ-----NNL 449
N H I + + + L Y G H L ++ + +
Sbjct: 441 NEYALH--RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH--LKNIEHPERMTLFRMV 496
Query: 450 YGEISFNW-RNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKL 508
+ + F + K+ +++ N GSI + L +I P ++E+L
Sbjct: 497 F--LDFRFLEQ--KI-RHDSTAWNASGSILNTLQQ------LKFYKPYICDNDP-KYERL 544
Query: 509 FSLNKLILNLNQLS 522
+N ++ L ++
Sbjct: 545 --VNAILDFLPKIE 556
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 5e-04
Identities = 58/364 (15%), Positives = 104/364 (28%), Gaps = 100/364 (27%)
Query: 710 FGQRKRDSQEKRRTFF-----GPKATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEK 764
+ S R F+ + F VL N KFL I +
Sbjct: 55 IMSKDAVSG-TLRLFWTLLSKQEEMVQKF-----VEEVLRINYKFLMSPI--------KT 100
Query: 765 YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVLALTEIRHRNII 822
+Y + + +N +F + + +L AL E+R +
Sbjct: 101 EQRQPSMMTRMYIEQRD-------RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153
Query: 823 KFHGF------------CSN----AQHSFIVSEYLDRGS--------------LTTILKD 852
G C + + F + +L+ + L I +
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF-WLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 853 DAAAKEFGWNQRMNVIKGVANALSYL-----HHDCLPPIVHGDISSKNVLLDSEHEAHVS 907
+ + N ++ I + L L + +CL +V L +V
Sbjct: 213 WTSRSDHSSNIKLR-IHSIQAELRRLLKSKPYENCL--LV----------LL-----NVQ 254
Query: 908 DFGIAKFLNPHS--------SNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLA--L 956
+ N T F + H T +L L
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE---VKSLLLKYL 311
Query: 957 EVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM-DKLMSIMEVAILCLVES 1015
+ + PR+ ++TN S +I E ++ + V DKL +I+E ++ L E
Sbjct: 312 DCRPQDLPREVLTTNPRRLS-IIAESIRDGLATW-DNWKHVNCDKLTTIIESSLNVL-EP 368
Query: 1016 PEAR 1019
E R
Sbjct: 369 AEYR 372
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 6e-10
Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 34/171 (19%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--------- 921
VA + +L +H D++++N+LL ++ + DFG+A+ +
Sbjct: 202 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 922 --WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
W APE T + DV SFGVL E+ G P V + F
Sbjct: 259 LKWM---------APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRR 308
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ E R+ P ++ M C P RPT ++ L
Sbjct: 309 LKE-----GTRMRAP-DYTTPEMYQTML---DCWHGEPSQRPTFSELVEHL 350
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 2e-05
Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 21/159 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHR 819
+G+G G V +A+ + AVK E ++E+ L I H
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA---LMSELKILIHIGHHL 86
Query: 820 NIIKFHGFCS-NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N++ G C+ ++ E+ G+L + ++R + +
Sbjct: 87 NVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKTKGARFR 136
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ D+ + + S + S F K L+
Sbjct: 137 QGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD 175
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 7e-10
Identities = 26/134 (19%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 511 LNKLILNLNQLSGGVPLEFGSLTELQYLDL--SANKLSSSIPKSMGNLSKLHYLNLSNNQ 568
+ K + + + TE + ++L + + ++ L +L LS N
Sbjct: 1 MAKATTIKDAIRIFEERKSVVATEAEKVELHGMIPPIEK-MDATLSTLKACKHLALSTNN 59
Query: 569 FNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEM 628
KI + + +L L L N ++ +I ++LEEL +S+N + L E++
Sbjct: 60 I-EKI-SSLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASLSG--IEKL 114
Query: 629 RSLSRIDIAYNELQ 642
+L + ++ N++
Sbjct: 115 VNLRVLYMSNNKIT 128
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 1e-09
Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 7/142 (4%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
+L + + + +L ++L LS N + I S+ + L L+L N K
Sbjct: 29 ELHGMIPPIEK-MDATLSTLKACKHLALSTNNIEK-I-SSLSGMENLRILSLGRNLI-KK 84
Query: 573 IPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIP-GCFEEMRSL 631
I L EL +S+N + + I + +L L +S+N + + + L
Sbjct: 85 IENLDAVADTLEELWISYNQIA-SLSG-IEKLVNLRVLYMSNNKITNWGEIDKLAALDKL 142
Query: 632 SRIDIAYNELQGPIPNSTAFKD 653
+ +A N L + A +
Sbjct: 143 EDLLLAGNPLYNDYKENNATSE 164
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 3e-09
Identities = 33/184 (17%), Positives = 61/184 (33%), Gaps = 41/184 (22%)
Query: 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLH 162
+ L+ + + +S L + L L N + + + + LR+L
Sbjct: 27 KVELHGMIPPI-EKMDATLSTLKACKHLALSTNNIEKI--SSLSGMENLRILS------- 76
Query: 163 GSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNS 222
L N +I L L+++ N + S+ + L +
Sbjct: 77 -----------------LGRNLIK-KIENLDAVADTLEELWISYNQI-ASLSG-IEKLVN 116
Query: 223 LSILDLSQNQLRGSIPFS-LANLSNLGILYLYKN----------SLFGFIPSVIGNLKSL 271
L +L +S N++ LA L L L L N + + V+ L +L
Sbjct: 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNL 176
Query: 272 FELD 275
+LD
Sbjct: 177 KKLD 180
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 17/158 (10%)
Query: 161 LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220
+ E K+ L ++ +L L +L L+ N++ I ++ +
Sbjct: 17 RKSVVATEAEKVELHG----MIPPIE-KMDATLSTLKACKHLALSTNNI-EKISSL-SGM 69
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSV--IGNLKSLFELDLSE 278
+L IL L +N ++ I A L L++ N I S+ I L +L L +S
Sbjct: 70 ENLRILSLGRNLIK-KIENLDAVADTLEELWISYN----QIASLSGIEKLVNLRVLYMSN 124
Query: 279 NQL--FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG 314
N++ +G I + L L + L N L
Sbjct: 125 NKITNWGEI-DKLAALDKLEDLLLAGNPLYNDYKENNA 161
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 38/187 (20%), Positives = 64/187 (34%), Gaps = 21/187 (11%)
Query: 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNM-CENHLFGLIPKSFRNLTSLERLRFNQNNL 425
++K ++ + T+ V + + + L + + L N
Sbjct: 1 MAKATTIKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLAL-STNN 59
Query: 426 FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSS 485
K+ + NL L L +N + +I L S N I S+ I
Sbjct: 60 IEKI-SSLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQI-ASLSG-IEKLV 115
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKL-ILNL--NQLSGGVPLEFGS----------L 532
L+VL +S+N I + +KL +L+KL L L N L + L
Sbjct: 116 NLRVLYMSNNKI--TNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173
Query: 533 TELQYLD 539
L+ LD
Sbjct: 174 PNLKKLD 180
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 321 ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV 380
EL I ++ + ++ L + + L L N + + +++L L L RN +
Sbjct: 29 ELHGMIPPIEK-MDATLSTLKACKHLALSTNNIEKISS--LSGMENLRILSLGRNLIK-K 84
Query: 381 IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL--FGKVYEAFGDHPN 438
I + L + + N + L L +L L + N + +G++ +
Sbjct: 85 IENLDAVADTLEELWISYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEI-DKLAALDK 141
Query: 439 LTFLDLSQNNLYGEISFN 456
L L L+ N LY + N
Sbjct: 142 LEDLLLAGNPLYNDYKEN 159
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 39/181 (21%), Positives = 64/181 (35%), Gaps = 44/181 (24%)
Query: 752 EEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEV 810
II + +G G G V + + FA+K D + EV
Sbjct: 13 NAIIDDYKVTSQV--LGLGINGKVLQIFNKRTQEKFALKMLQ---------DCPKARREV 61
Query: 811 LALTEI-RHRNIIKFHGFCSNA----QHSFIVSEYLDRGSL-TTILK--------DDAAA 856
+ +I++ N + IV E LD G L + I +A+
Sbjct: 62 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS- 120
Query: 857 KEFGWNQRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAH---VSDFGIA 912
++K + A+ YLH + I H D+ +N+L S+ ++DFG A
Sbjct: 121 ---------EIMKSIGEAIQYLHSIN----IAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Query: 913 K 913
K
Sbjct: 168 K 168
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 9e-10
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLN-----EVLALTEIRHRN 820
+G+G G V K +G I A+KKF +D D+ + E+ L ++RH N
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFL-------ESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD-DAAAKEFGWNQRMNVIKGVANALSYLH 879
++ C + ++V E++D TIL D + + + + N + + H
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVD----HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 880 -HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
H+ + H DI +N+L+ + DFG A+ L + T Y APE+
Sbjct: 142 SHNII----HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-09
Identities = 52/288 (18%), Positives = 94/288 (32%), Gaps = 59/288 (20%)
Query: 746 NGKFLYEEIIKAIDDFGEKY----CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMA 801
G+ ++I + Y I G G+V GI A+K+ + +
Sbjct: 5 KGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNT--VSDGR 62
Query: 802 DQDEFLNEVLA---------LTEIRHRNIIK-FHGFCSNAQHSF----IVSEYLDRGSLT 847
+ + L L H NI+ F + + +V+E + L
Sbjct: 63 TVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLA 121
Query: 848 TILKDDAAAKEFGWNQRMNVI-----KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902
++ D Q + G L LH +VH D+ N+LL +
Sbjct: 122 QVIHDQRIVIS---PQHIQYFMYHILLG----LHVLHE---AGVVHRDLHPGNILLADNN 171
Query: 903 EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVI 959
+ + DF +A+ +N T + Y APE+ + T+ D+ S G + E+
Sbjct: 172 DITICDFNLAREDTA-DANKTHYVTHRWYRAPEL--VMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 960 KGNHP----RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
+ + N I E+ + TP + + S
Sbjct: 229 NR-KALFRGSTFYNQ-----LNKIVEV-------VGTPKIEDVVMFSS 263
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 1e-09
Identities = 35/179 (19%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF----LNEVLALTEIRHRNI 821
+G G +VYK +G+ A+K+ + ++ + E+ + E++H NI
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVK-------LDSEEGTPSTAIREISLMKELKHENI 65
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA----NALSY 877
++ + +V E++D L + D +N++K L++
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDN-DLKKYM-DSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
H + I+H D+ +N+L++ + + DFG+A+ + +++ T Y AP++
Sbjct: 124 CHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV 179
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 6/115 (5%)
Query: 479 PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE-FGSLTELQY 537
+ ++ + + LDL I I L + + + N++ L+ F L L+
Sbjct: 13 AQYTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIR---KLDGFPLLRRLKT 68
Query: 538 LDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHN 591
L ++ N++ L L L L+NN L L+ L + N
Sbjct: 69 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 4e-09
Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 6/115 (5%)
Query: 191 PSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGIL 250
N L L + I N+ L+ +D S N++R + L L L
Sbjct: 13 AQYTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKTL 69
Query: 251 YLYKNSLFGFIPSVIGNLKSLFELDLSENQL--FGSIPLSFSNLSSLTLMSLFNN 303
+ N + + L L EL L+ N L G + ++L SLT + + N
Sbjct: 70 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 5e-09
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 528 EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELD 587
++ + + LDL K+ I L + ++ S+N+ K+ F L L L
Sbjct: 14 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKTLL 70
Query: 588 LSHNFLQGEIPPQICNMESLEELNLSHNNLFDL 620
+++N + + L EL L++N+L +L
Sbjct: 71 VNNNRICRIGEGLDQALPDLTELILTNNSLVEL 103
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 39/175 (22%), Positives = 62/175 (35%), Gaps = 35/175 (20%)
Query: 106 LNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSI 165
+ L+ ++ Q +N + R LDL ++ VI L + F N
Sbjct: 2 VKLTAELI--EQAAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDN------ 52
Query: 166 PLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSI 225
EI KL L L L +NNN + + L L+
Sbjct: 53 --EIRKLD------------------GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92
Query: 226 LDLSQNQLR--GSIPFSLANLSNLGILYLYKN---SLFGFIPSVIGNLKSLFELD 275
L L+ N L G + LA+L +L L + +N + + VI + + LD
Sbjct: 93 LILTNNSLVELGDLDP-LASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 146
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 5e-08
Identities = 17/105 (16%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 538 LDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEI 597
+ L+A + + N + L+L + I L +D S N ++ ++
Sbjct: 2 VKLTAELIEQA--AQYTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIR-KL 57
Query: 598 PPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
+ L+ L +++N + + G + + L+ + + N L
Sbjct: 58 D-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 34/137 (24%)
Query: 315 NLEALSELGLYINQLDGVIPPSIGNLSS----LRTLYLYDNGFYGLVPNEIGYLKSLSKL 370
N EL L ++ P I NL + + DN L + L+ L L
Sbjct: 17 NAVRDRELDLRGYKI-----PVIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTL 69
Query: 371 ELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVY 430
+ N + + L L + + N L L L+ L
Sbjct: 70 LVNNNRICRIGEGLDQALPDLTELILTNNSL--------VELGDLDPLASL--------- 112
Query: 431 EAFGDHPNLTFLDLSQN 447
+LT+L + +N
Sbjct: 113 ------KSLTYLCILRN 123
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-09
Identities = 61/276 (22%), Positives = 112/276 (40%), Gaps = 50/276 (18%)
Query: 748 KFLYEEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMAD 802
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 14 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIH 71
Query: 803 QDEFLNEVLALTEIRHRNIIKFH------GFCSNAQHSFIVSEYLDRGSLTTILK----D 852
E+ L ++H N+I ++V+ + L I+K
Sbjct: 72 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLT 130
Query: 853 DAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912
D + + Q +++G L Y+H I+H D+ N+ ++ + E + DFG+A
Sbjct: 131 DDHVQFLIY-Q---ILRG----LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 913 KFLNPHSSNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGNHP----RDY 967
+ + T + T Y APEI + M + D+ S G + E++ G D+
Sbjct: 180 R---HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG-RTLFPGTDH 235
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
+ +I + + TP +++ K+ S
Sbjct: 236 IDQ-----LKLILRL-------VGTPGAELLKKISS 259
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 4e-09
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 21/177 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLN-----EVLALTEIRHRN 820
IG+G G V+K +G I A+KKF ++ D + E+ L +++H N
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFL-------ESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH- 879
++ + +V EY D ++ L D + + ++ A+++ H
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDH-TVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
H+C+ H D+ +N+L+ + DFG A+ L S + T Y +PE+
Sbjct: 121 HNCI----HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 4e-09
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 18/175 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEVLALTEIRHRNI 821
IG+G G VYKA+ G FA+KK + +DE + E+ L E++H NI
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR-------LEKEDEGIPSTTIREISILKELKHSNI 62
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+K + + +V E+LD+ L +L D + + + N ++Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
++H D+ +N+L++ E E ++DFG+A+ +T T Y AP++
Sbjct: 120 R---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-09
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 42/214 (19%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-FH 825
IG G G V++A+L A+KK + D+ E+ + ++H N++
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKV--------LQDKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 826 GFCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKG----VANA 874
F SN +V EY+ ++ + A Q M +IK + +
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKL-----KQTMPMLLIKLYMYQLLRS 153
Query: 875 LSYLH-HDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
L+Y+H I H DI +N+LLD + DFG AK L N ++ + Y
Sbjct: 154 LAYIHSIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN-VSYICSRYYR 208
Query: 933 APEIAHMMRATEKY----DVHSFG-VLALEVIKG 961
APE+ + AT Y D+ S G V+A E+++G
Sbjct: 209 APEL--IFGATN-YTTNIDIWSTGCVMA-ELMQG 238
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 5e-09
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLN-----EVLALTEIRHRN 820
IG+G G VYKA +G + A+KK + + E + E+ L E+ H N
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIR-------LDTETEGVPSTAIREISLLKELNHPN 63
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
I+K ++V E+L + L + D +A + + + L++ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
++H D+ +N+L+++E ++DFG+A+ +T T Y APEI
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 59.2 bits (143), Expect = 5e-09
Identities = 68/515 (13%), Positives = 145/515 (28%), Gaps = 88/515 (17%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQI----SNLSKLRALDLGNNQLSGVIPQEIGHLTCL 151
P NL G + P + +NL +L+++ +S + +
Sbjct: 79 KLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARAD 138
Query: 152 RMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSL-- 209
+ ++ G L++++T C + L + +S
Sbjct: 139 DLETLKLDKCSG-----FTTDGLLSIVTHCRK---------------IKTLLMEESSFSE 178
Query: 210 --FGSIPNVMGNLNSLSILDLSQNQLRG-------SIPFSLANLSNLGILYLYKNSLFGF 260
+ + + SL +L+ + +I + +L ++ + L GF
Sbjct: 179 KDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGF 238
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALS 320
NL+ L+E+ ++ L + L + +P +
Sbjct: 239 F-KAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNE-MPILFPFAAQIR 296
Query: 321 ELGL-YINQLDGVIPPSIGNLSSLRTLYLY----DNGFYGLVPNEIGYLKSLSKLELCRN 375
+L L Y I +L L D G L K L +L + R
Sbjct: 297 KLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQY----CKQLKRLRIERG 352
Query: 376 HLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGD 435
+ G +++ L+ + + LE + +++ + E+ G
Sbjct: 353 ADEQGMEDEEGLVSQRGLIALA------------QGCQELEYMAVYVSDITNESLESIGT 400
Query: 436 H-PNLTFLDLSQNNLYGEISFNW---------RNFPKLGTFNASMNNIYGSIPPEIGDSS 485
+ NL L + I+ KL F + + D
Sbjct: 401 YLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLR------QGGLTDLG 454
Query: 486 ---------KLQVLDLSSNHIVGK-IPVQFEKLFSLNKLILNLNQLS-GGVPLEFGSLTE 534
++ + L + + +L KL + S + L
Sbjct: 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPS 514
Query: 535 LQYLDLSANKLSSSIPKSMG---NLSKLHYLNLSN 566
L+YL + + S + M + +
Sbjct: 515 LRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRR 549
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 1e-06
Identities = 60/406 (14%), Positives = 125/406 (30%), Gaps = 57/406 (14%)
Query: 82 SLSSLGLNG--TFQDFSFSSF----PHLMYLNLSCNVLYGNIPPQISNLSK----LRALD 131
L +L L+ F S + L + + + L++ L L+
Sbjct: 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLN 198
Query: 132 LGNNQLSGVIPQEIGHLT--CLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRI 189
+ + + P+++ + C ++ V + L + N+ C + + I
Sbjct: 199 FYMTEFAKISPKDLETIARNCRSLVSVKVGDFE-ILELVGFFKAAANLEEFCGGSLNEDI 257
Query: 190 PPSLGNLSNLAYLYLNNNSLFG----SIPNVMGNLNSLSILDLSQNQLRGSIPFSLA-NL 244
++ + L L +P + + LDL L +L
Sbjct: 258 GMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKC 317
Query: 245 SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNS 304
NL +L + + K L L + + +S L++L
Sbjct: 318 PNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGC 377
Query: 305 LSGSIPPTQGNLEALSELGLYINQL--DGV--IPPSIGNLSSLRTLYLY----------D 350
L + +Y++ + + + I + NL R + L D
Sbjct: 378 QE------------LEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD 425
Query: 351 NGFYGLVPNEIGYLKSLSKLEL--CRNHLSGVIPHSIG----NLTKLVLVNMCENHLFGL 404
NG L+ K L + + L+ + IG N+ ++L GL
Sbjct: 426 NGVRSLLIG----CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGY-VGESDEGL 480
Query: 405 IPKSFRNLTSLERLRFNQNNLFGK-VYEAFGDHPNLTFLDLSQNNL 449
+ + R +L++L + + A P+L +L +
Sbjct: 481 M-EFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 4e-05
Identities = 55/356 (15%), Positives = 111/356 (31%), Gaps = 60/356 (16%)
Query: 289 FSNLSSLTLMSLFNNSLSGSIPPTQGNL--EALSELGLYINQLDGVIPPSIGNLSSLRTL 346
F NL SL L ++ IP G ++E+ + QL V R +
Sbjct: 72 FPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSV---------HFRRM 122
Query: 347 YLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIP 406
+ D L L++L L+ C + + + + K+ + M E+
Sbjct: 123 IVSDLDLDRLAKARADDLETLK-LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDG 181
Query: 407 KSF----RNLTSLERLRFNQNNLFG---KVYEAFGDH-PNLTFLDLSQNNLYGEISFNWR 458
K ++ TSLE L F K E + +L + + + + F
Sbjct: 182 KWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGF--- 238
Query: 459 NFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKL-ILN 517
++ L+ S + +P ++ L KL L
Sbjct: 239 ----------------------FKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLG 276
Query: 518 LNQLS-GGVPLEFGSLTELQYLDLS-ANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
L+ + +P+ F +++ LDL A + + L L N + +
Sbjct: 277 LSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEV 336
Query: 576 EFEKLIHLSELDLSHNFLQGEIPPQICNME------------SLEELNLSHNNLFD 619
+ L L + + + + + LE + + +++ +
Sbjct: 337 LAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITN 392
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 3e-04
Identities = 54/299 (18%), Positives = 97/299 (32%), Gaps = 36/299 (12%)
Query: 370 LELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF------------RNLTSLER 417
+ LC + NL L L +F LIP+++ NL L+
Sbjct: 57 MALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKS 116
Query: 418 LRFNQNNL--FGKVYEAFGDHPNLTFLDLSQNNLYGEISFN--WRNFPKLGTFNASMNNI 473
+ F + + A +L L L + + + + K+ T ++
Sbjct: 117 VHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSF 176
Query: 474 YGSIPPEIGD----SSKLQVLDLSSNHIVGKIPVQFEKLF----SLNKLILNLNQLS--G 523
+ + ++ L+VL+ P E + SL + + ++
Sbjct: 177 SEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV 236
Query: 524 GVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHL 583
G +L E L+ + ++ KL L LS N +P F +
Sbjct: 237 GFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNE-MPILFPFAAQI 295
Query: 584 SELDLSHNFLQGE-IPPQICNMESLEELNLSH----NNLFDLIPGCFEEMRSLSRIDIA 637
+LDL + L+ E I +LE L + L L C + L R+ I
Sbjct: 296 RKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYC----KQLKRLRIE 350
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 6e-09
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+ DF +G G G V+ +G +A+K +++ + + +E L L+ +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIV 63
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-----DDAAAK----EFGWNQRMNV 867
H II+ G +AQ F++ +Y++ G L ++L+ + AK E
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE--------- 114
Query: 868 IKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
V AL YLH D I++ D+ +N+LLD ++DFG AK++ +T
Sbjct: 115 ---VCLALEYLHSKD----IIYRDLKPENILLDKNGHIKITDFGFAKYVP--DVTYT-LC 164
Query: 927 GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
GT Y APE+ + D SFG+L E++ G P
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 7e-09
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 483 DSSKLQVLDLSSNHI-VGKIPVQFEKLFSLNKLILNLNQLSGGVPLE-FGSLTELQYLDL 540
S ++ L L ++ GK+ ++ L L L+ + L +L+ L+L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS---IANLPKLNKLKKLEL 71
Query: 541 SANKLSSSIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHN 591
S N++S + L +LNLS N+ +KL +L LDL +
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-08
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 531 SLTELQYLDLSANKLSS-SIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLS 589
+ ++++ L L ++ + + +L +L+ N I KL L +L+LS
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKLELS 72
Query: 590 HNFLQGEIPPQICNMESLEELNLSHNNLFDL-IPGCFEEMRSLSRIDIAYNEL 641
N + G + +L LNLS N + DL +++ +L +D+ E+
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 555 NLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLS 613
S + L L N++ N K+ ++ L L + L I + + L++L LS
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIA-NLPKLNKLKKLELS 72
Query: 614 HNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
N + + E+ +L+ ++++ N+++
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 195 NLSNLAYLYLNNNSL-FGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253
S++ L L+N+ G + + L L L SI +L L+ L L L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIA-NLPKLNKLKKLELS 72
Query: 254 KNSLFGFIPSVIGNLKSLFELDLSENQL--FGSIPLSFSNLSSLTLMSLFNN 303
N + G + + +L L+LS N++ +I L +L + LFN
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTI-EPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Query: 151 LRMLYFDVNHL-HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSL 209
++ L D + G + + + L+ + + I +L L+ L L L++N +
Sbjct: 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIA-NLPKLNKLKKLELSDNRV 76
Query: 210 FGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKN---SLFGFIPSVI 265
G + + +L+ L+LS N+++ S L L NL L L+ +L + +V
Sbjct: 77 SGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVF 136
Query: 266 GNLKSLFELD 275
L L LD
Sbjct: 137 KLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 6e-06
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 243 NLSNLGILYLYKNSL-FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301
S++ L L + G + + + L L L SI + L+ L + L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGL-TSIA-NLPKLNKLKKLELS 72
Query: 302 NNSLSGSIPPTQGNLEALSELGL---YINQLDGVIPPSIGNLSSLRTLYLYDN 351
+N +SG + L+ L L I L + P + L +L++L L++
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEP--LKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKL 463
L ++ ++ L L +++N GK+ + L FL L I+ N KL
Sbjct: 11 LRNRTPSDVKELV-LDNSRSNE-GKLEGLTDEFEELEFLSTINVGL-TSIA-NLPKLNKL 66
Query: 464 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKL-ILNL 518
S N + G + L L+LS N I K E L L L L+L
Sbjct: 67 KKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKI--KDLSTIEPLKKLENLKSLDL 120
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 7e-05
Identities = 31/134 (23%), Positives = 49/134 (36%), Gaps = 7/134 (5%)
Query: 315 NLEALSELGLYINQLD-GVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELC 373
+ EL L ++ + G + L L + G + + L L KLEL
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELS 72
Query: 374 RNHLSGVIPHSIGNLTKLVLVNMCENHLFGL-IPKSFRNLTSLERLRFNQN---NLFGKV 429
N +SG + L +N+ N + L + + L +L+ L NL
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYR 132
Query: 430 YEAFGDHPNLTFLD 443
F P LT+LD
Sbjct: 133 ENVFKLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 9e-04
Identities = 30/131 (22%), Positives = 42/131 (32%), Gaps = 31/131 (23%)
Query: 80 SISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSK---LRALDLGNNQ 136
+ L + N + F L +L+ L I+NL K L+ L+L +N+
Sbjct: 21 ELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGL-----TSIANLPKLNKLKKLELSDNR 75
Query: 137 LSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNL 196
+SG + L L N I LS I L L
Sbjct: 76 VSGGLEVLAEKCPNLTHLNLSGNK--------IKDLSTIEPLK---------------KL 112
Query: 197 SNLAYLYLNNN 207
NL L L N
Sbjct: 113 ENLKSLDLFNC 123
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 8e-09
Identities = 58/276 (21%), Positives = 105/276 (38%), Gaps = 49/276 (17%)
Query: 747 GKFLYEEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMA 801
F +++ K + + Y +G G GSV A + SG A+KK + F
Sbjct: 8 KGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR--PFQSEI 65
Query: 802 DQDEFLNEVLALTEIRHRNIIKFH------GFCSNAQHSFIVSEYLDRGSLTTILK---D 852
E+L L ++H N+I N ++V ++ L I+
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFS 124
Query: 853 DAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912
+ + + Q ++KG L Y+H +VH D+ N+ ++ + E + DFG+A
Sbjct: 125 EEKIQYLVY-Q---MLKG----LKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Query: 913 KFLNPHSSNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGNHP----RDY 967
+ + T + T Y APE+ M + D+ S G + E++ G +DY
Sbjct: 174 RHADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG-KTLFKGKDY 229
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
+ I ++ P + + KL
Sbjct: 230 LDQ-----LTQILKV-------TGVPGTEFVQKLND 253
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 1e-08
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 29/187 (15%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF----LNEVLALTEIRHRNI 821
IG+G G V+KA +G A+KK +L + +++ F L E+ L ++H N+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKK----VLMEN--EKEGFPITALREIKILQLLKHENV 78
Query: 822 IKFHGFCSNAQHS--------FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
+ C ++V ++ + L +L +F ++ V++ + N
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLVKFTLSEIKRVMQMLLN 135
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA-KFLNPHSSNWTAFAG---TF 929
L Y+H + I+H D+ + NVL+ + ++DFG+A F +S + T
Sbjct: 136 GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTL 192
Query: 930 GYAAPEI 936
Y PE+
Sbjct: 193 WYRPPEL 199
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
L L+ NQ+ P +L NL LY N L V L L +LDL++N L
Sbjct: 34 DKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93
Query: 282 FGSIPL-SFSNLSSLTLMSLFNN 303
SIP +F NL SLT + L+NN
Sbjct: 94 -KSIPRGAFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 196 LSNLAYLYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQLRGSIP---FSLANLSNLGILY 251
L NL LY N+N L +IP V L L+ LDL+ N L+ SIP F NL +L +Y
Sbjct: 56 LVNLQQLYFNSNKL-TAIPTGVFDKLTQLTQLDLNDNHLK-SIPRGAF--DNLKSLTHIY 111
Query: 252 LYKN 255
LY N
Sbjct: 112 LYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 4e-07
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQL 329
L L+ NQ+ P F +L +L + +N L+ +IP G L L++L L N L
Sbjct: 37 RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPT--GVFDKLTQLTQLDLNDNHL 93
Query: 330 DGVIPPSIGNLSSLRTLYLYDN 351
+ + NL SL +YLY+N
Sbjct: 94 KSIPRGAFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQ 568
+L LN NQ++ P F L LQ L ++NKL++ L++L L+L++N
Sbjct: 37 RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDL 588
G T+ Q L L+ N+++ P +L L L ++N+ IPT F+KL L++LDL
Sbjct: 30 GIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDL 88
Query: 589 SHNFLQGEIPPQIC-NMESLEELNLSHNNLFD 619
+ N L+ IP N++SL + L +NN +D
Sbjct: 89 NDNHLKS-IPRGAFDNLKSLTHIYL-YNNPWD 118
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 57.0 bits (137), Expect = 2e-08
Identities = 64/258 (24%), Positives = 100/258 (38%), Gaps = 33/258 (12%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALT 814
+ DF +GKG G V +E + ++AVK ++ + D + + E VLAL
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDD-DVECTMVEKRVLALP 398
Query: 815 EIRHRNIIKFHGFCS-NAQHSFIVSEYLDRGSL------TTILKDDAA---AKEFGWNQR 864
+ + + H C + V EY++ G L K+ A A E
Sbjct: 399 -GKPPFLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE------ 450
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA 924
+A L +L I++ D+ NV+LDSE ++DFG+ K
Sbjct: 451 ------IAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT 501
Query: 925 FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ 984
F GT Y APEI + D +FGVL E++ G P + + I E N
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP--FEGEDEDELFQSIMEHNV 559
Query: 985 NLDHRLPTPSRDVMDKLM 1002
+ + + LM
Sbjct: 560 AYPKSMSKEAVAICKGLM 577
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 3e-08
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLN-----EVLALTEIRHRNI 821
+G+G G VYKA+ G I A+K+ + +DE + E+ L E+ H NI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIR-------LDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+ + + +V E++++ L +L D +Q + + +++ H
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEK-DLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
I+H D+ +N+L++S+ ++DFG+A+ ++T T Y AP++
Sbjct: 139 R---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV 190
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 3e-08
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEVLALTEIRHRN 820
+G+G G VYKA + + A+K+ + ++E + EV L E++HRN
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIR-------LEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
II+ + ++ EY + L + + + + + N +++ H
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAEN-DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHS 150
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAH-----VSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+H D+ +N+LL + + DFG+A+ +T T Y PE
Sbjct: 151 RR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPE 207
Query: 936 I 936
I
Sbjct: 208 I 208
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 3e-08
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 54/259 (20%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-F 824
IG+G G V A + + + A+KK + F+ L E+ L RH NII
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 825 HGFCSNAQHSF----IVSEYLDRGSLTTILK----DDAAAKEFGWNQRMNVIKGVANALS 876
+ IV + ++ L +LK + F + Q +++G L
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLY-Q---ILRG----LK 142
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN---WTAFAGTFGYAA 933
Y+H ++H D+ N+LL++ + + DFG+A+ +P + T + T Y A
Sbjct: 143 YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 934 PEIAHMMRATEKY----DVHSFG-VLALEVIKGNHP----RDYVSTNFSSFSNMITEINQ 984
PEI M ++ Y D+ S G +LA E++ P + Y+ N I I
Sbjct: 200 PEI---MLNSKGYTKSIDIWSVGCILA-EMLSN-RPIFPGKHYLDQ-----LNHILGI-- 247
Query: 985 NLDHRLPTPSRDVMDKLMS 1003
L +PS++ ++ +++
Sbjct: 248 -----LGSPSQEDLNCIIN 261
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 3e-08
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLN-----EVLALTEIRHRN 820
IG+G G+V+KA + I A+K+ + D DE + E+ L E++H+N
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR-------LDDDDEGVPSSALREICLLKELKHKN 62
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
I++ H + + +V E+ D+ L D+ + + + + L + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
++H D+ +N+L++ E +++FG+A+ ++A T Y P++
Sbjct: 120 RN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 3e-08
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF--------LNEVLALTEIR 817
+G+G+ +VYKA + + I A+KK + + E L E+ L E+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIK-------LGHRSEAKDGINRTALREIKLLQELS 70
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VAN 873
H NII + + +V ++++ L I+KD + + IK
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKD--NSLVLT----PSHIKAYMLMTLQ 123
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L YLH I+H D+ N+LLD ++DFG+AK + +T T Y A
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA 180
Query: 934 PEI 936
PE+
Sbjct: 181 PEL 183
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 59/277 (21%), Positives = 107/277 (38%), Gaps = 50/277 (18%)
Query: 747 GKFLYEEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMA 801
F +E+ K + Y +G G G+V A + +G A+KK F
Sbjct: 9 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR--PFQSEL 66
Query: 802 DQDEFLNEVLALTEIRHRNIIKFH------GFCSNAQHSFIVSEYLDRGSLTTILK---- 851
E+ L +RH N+I + ++V ++ L ++K
Sbjct: 67 FAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKL 125
Query: 852 DDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911
+ + + Q ++KG L Y+H I+H D+ N+ ++ + E + DFG+
Sbjct: 126 GEDRIQFLVY-Q---MLKG----LRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL 174
Query: 912 AKFLNPHSSNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGNHP----RD 966
A+ + T + T Y APE+ + MR T+ D+ S G + E+I G D
Sbjct: 175 ARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG-KTLFKGSD 230
Query: 967 YVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
++ I ++ TP + + +L S
Sbjct: 231 HLDQ-----LKEIMKV-------TGTPPAEFVQRLQS 255
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 51/265 (19%), Positives = 102/265 (38%), Gaps = 57/265 (21%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-- 823
+G G G V+ A + A+KK ++ + L E+ + + H NI+K
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKK----IVLTDPQSVKHALREIKIIRRLDHDNIVKVF 74
Query: 824 --------FHGFCSNAQHSF----IVSEYLDRGSLTTILK----DDAAAKEFGWNQRMNV 867
+ IV EY++ L +L+ + A+ F + Q +
Sbjct: 75 EILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMY-Q---L 129
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFLNPHSSN---WT 923
++G L Y+H ++H D+ N+ +++E + DFG+A+ ++PH S+ +
Sbjct: 130 LRG----LKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 924 AFAGTFGYAAPEI-AHMMRATEKYDVHSFGVLALEVIKGNHP----RDYVSTNFSSFSNM 978
T Y +P + T+ D+ + G + E++ G + +
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG-KTLFAGAHELEQ-----MQL 236
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMS 1003
I E +P + +L+S
Sbjct: 237 ILES-------IPVVHEEDRQELLS 254
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 4e-08
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 489 VLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE-FGSLTELQYLDLSANKLSS 547
VLD ++ GKI + +L L L L + L +L+ L+LS N++
Sbjct: 30 VLDNCKSND-GKIEGLTAEFVNLEFLSLINVGLIS---VSNLPKLPKLKKLELSENRIFG 85
Query: 548 SIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHN 591
+ L L +LNLS N+ +KL L LDL +
Sbjct: 86 GLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 9e-08
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS 236
VL C +N G+I NL +L L N L S+ N + L L L+LS+N++ G
Sbjct: 30 VLDNCKSN-DGKIEGLTAEFVNLEFLSLINVGL-ISVSN-LPKLPKLKKLELSENRIFGG 86
Query: 237 IPFSLANLSNLGILYLYKNSLFGF-IPSVIGNLKSLFELDLSENQL 281
+ L NL L L N L + L+ L LDL ++
Sbjct: 87 LDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 9e-08
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 527 LEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSEL 586
++ EL LD + I L +L+L N + KL L +L
Sbjct: 21 RTPAAVREL-VLDNCKSNDGK-IEGLTAEFVNLEFLSLINVGL-ISVSN-LPKLPKLKKL 76
Query: 587 DLSHNFLQGEIPPQICNMESLEELNLSHNNLFDL 620
+LS N + G + + +L LNLS N L D+
Sbjct: 77 ELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDI 110
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 2e-07
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 555 NLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLS 613
+ + L L N + N KI + ++L L L + L + + + L++L LS
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELS 79
Query: 614 HNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
N +F + E++ +L+ ++++ N+L+
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 2e-07
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 7/135 (5%)
Query: 151 LRMLYFDVNHLH-GSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSL 209
+R L D + G I + + L+L + + L L L L L+ N +
Sbjct: 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELSENRI 83
Query: 210 FGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKN---SLFGFIPSVI 265
FG + + L +L+ L+LS N+L+ S L L L L L+ +L + SV
Sbjct: 84 FGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVF 143
Query: 266 GNLKSLFELDLSENQ 280
L L LD + +
Sbjct: 144 KLLPQLTYLDGYDRE 158
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 26/134 (19%)
Query: 219 NLNSLSILDLSQNQLR-GSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLS 277
++ L L + G I A NL L L L S + L L +L+LS
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELS 79
Query: 278 ENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI 337
EN++FG + + L +LT ++L N L ++ L L
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLK--------DISTLEPL--------------- 116
Query: 338 GNLSSLRTLYLYDN 351
L L++L L++
Sbjct: 117 KKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 40/164 (24%), Positives = 59/164 (35%), Gaps = 51/164 (31%)
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKL 463
L ++ + L L ++N GK+ + NL FL L L +S N PKL
Sbjct: 18 LRNRTPAAVRELV-LDNCKSND-GKIEGLTAEFVNLEFLSLINVGL-ISVS----NLPKL 70
Query: 464 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSG 523
KL+ L+LS N I G + + EKL +L L L+ N+L
Sbjct: 71 ---------------------PKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK- 108
Query: 524 GVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNN 567
++ L+ L L L L+L N
Sbjct: 109 -------DISTLEPLK---------------KLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 7e-05
Identities = 31/134 (23%), Positives = 45/134 (33%), Gaps = 26/134 (19%)
Query: 315 NLEALSELGLYINQLD-GVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELC 373
A+ EL L + + G I +L L L + G + + + L L KLEL
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELS 79
Query: 374 RNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAF 433
N + G + L L +N+ N L K L L++L
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKL-----KDISTLEPLKKL--------------- 119
Query: 434 GDHPNLTFLDLSQN 447
L LDL
Sbjct: 120 ---ECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 36/154 (23%)
Query: 81 ISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSK---LRALDLGNNQL 137
+ L + N + + F +L +L+L L +SNL K L+ L+L N++
Sbjct: 29 LVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGL-----ISVSNLPKLPKLKKLELSENRI 83
Query: 138 SGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLS 197
G + L L L N + +S + L L
Sbjct: 84 FGGLDMLAEKLPNLTHLNLSGNK--------LKDISTLEPLK---------------KLE 120
Query: 198 NLAYLYLNNNSLFGSIPN----VMGNLNSLSILD 227
L L L N + ++ + V L L+ LD
Sbjct: 121 CLKSLDLFNCEV-TNLNDYRESVFKLLPQLTYLD 153
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 4e-08
Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 28/124 (22%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
C +P G + LYL +N + P V L L+ LDL NQL +P
Sbjct: 16 CSGKSLASVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLP-- 70
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLMS 299
V L L +L L++NQL SIP +F NL SLT +
Sbjct: 71 ---------------------AGVFDKLTQLTQLSLNDNQL-KSIPRGAFDNLKSLTHIW 108
Query: 300 LFNN 303
L NN
Sbjct: 109 LLNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-07
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG---NLEALSELGLYINQL 329
L L +NQ+ P F L+ LT + L NN L+ +P G L L++L L NQL
Sbjct: 34 VLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPA--GVFDKLTQLTQLSLNDNQL 90
Query: 330 DGVIPPSIGNLSSLRTLYLYDN 351
+ + NL SL ++L +N
Sbjct: 91 KSIPRGAFDNLKSLTHIWLLNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 510 SLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQF 569
+ L L NQ++ P F LT+L LDL N+L+ L++L L+L++NQ
Sbjct: 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90
Query: 570 NHKIPTE-FEKLIHLSELDLSHN 591
IP F+ L L+ + L +N
Sbjct: 91 -KSIPRGAFDNLKSLTHIWLLNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDL 588
G T Q L L N+++ P L++L L+L NNQ +P F+KL L++L L
Sbjct: 27 GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQL-TVLPAGVFDKLTQLTQLSL 85
Query: 589 SHNFLQGEIPPQIC-NMESLEELNLSHNNLFD 619
+ N L+ IP N++SL + L NN +D
Sbjct: 86 NDNQLKS-IPRGAFDNLKSLTHIWL-LNNPWD 115
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 9e-08
Identities = 43/251 (17%), Positives = 81/251 (32%), Gaps = 41/251 (16%)
Query: 410 RNLTSLERLRFNQNNLFGKVYEAFGD-----HPNLTFLDLSQNNLYGE----ISFNWRNF 460
S+ L + N+L K + N+T L+LS N L + +
Sbjct: 48 NTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAI 107
Query: 461 P-KLGTFNASMNNIYGSIPPEIGD-----SSKLQVLDLSSNHIVGKIPVQFEKLF----- 509
P + + N+ E + + L+L N + K + ++
Sbjct: 108 PFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPA 167
Query: 510 SLNKLILNLNQL-SGGVPLEFGSLTE----LQYLDLSANKLSSSIPKS-----MGNLSKL 559
++N L L N L S L + LDLSAN L + +
Sbjct: 168 NVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHV 227
Query: 560 HYLNLSNNQFNHK----IPTEFEKLIHLSELDLSHNFLQGEIPPQ-------ICNMESLE 608
LNL N + + + L HL + L ++ ++ Q N++ +
Sbjct: 228 VSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKII 287
Query: 609 ELNLSHNNLFD 619
++ + +
Sbjct: 288 LVDKNGKEIHP 298
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-07
Identities = 60/388 (15%), Positives = 115/388 (29%), Gaps = 103/388 (26%)
Query: 261 IPSVIGNLKSLFELDLSENQL--FGSIPLSF---SNLSSLTLMSLFNNSLSGSIPPTQGN 315
+ + LDLS N L ++ L + +S+T ++L NSL N
Sbjct: 14 VEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFK------N 67
Query: 316 LEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN 375
+ L ++ I +++ +L L N + +
Sbjct: 68 SDELVQILAAIP-------------ANVTSLNLSGNFL-----SYKSS-----------D 98
Query: 376 HLSGVIPHSIGNLTKLVLVN-----MCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVY 430
L + +T L L + ++TSL LR N +
Sbjct: 99 ELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSL-NLRGNDLGIKSSDE 157
Query: 431 --EAFGDHP-NLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKL 487
+ P N+ L+L NNL + N +L F AS+ + +
Sbjct: 158 LIQILAAIPANVNSLNLRGNNLASK------NCAELAKFLASIP-------------ASV 198
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS 547
LDLS+N + + L + ++ + L+L N L
Sbjct: 199 TSLDLSANLL------GLKSYAELAYIFSSIP-------------NHVVSLNLCLNCLHG 239
Query: 548 S----IPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLI-------HLSELDLSHNFLQGE 596
+ +L L + L + + + + L + +D + +
Sbjct: 240 PSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299
Query: 597 IPPQICNM-----ESLEELNLSHNNLFD 619
I N+ + +L + L
Sbjct: 300 HSIPISNLIRELSGKADVPSLLNQCLIF 327
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-07
Identities = 50/266 (18%), Positives = 90/266 (33%), Gaps = 43/266 (16%)
Query: 418 LRFNQNNLFGKVY--EAFGDHPNLTFLDLSQNNLYGE----ISFNWR-NFPKLGTFNASM 470
+ + G E +T LDLS NNLY + + + + N S
Sbjct: 1 MNYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSG 60
Query: 471 NNIYGSIPPEIGD-----SSKLQVLDLSSNHIVGKIPVQF------EKLFSLNKLILNLN 519
N++ E+ + + L+LS N + F++ L L N
Sbjct: 61 NSLGFKNSDELVQILAAIPANVTSLNLSGNFL-SYKSSDELVKTLAAIPFTITVLDLGWN 119
Query: 520 QLSGGVPLEFGSL-----TELQYLDLSANKLS----SSIPKSMGNL-SKLHYLNLSNNQF 569
S EF + L+L N L + + + + + ++ LNL N
Sbjct: 120 DFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNL 179
Query: 570 NHKIPTEFEKLI-----HLSELDLSHNFLQGEIPPQIC-----NMESLEELNLSHNNLFD 619
K E K + ++ LDLS N L + ++ + LNL N L
Sbjct: 180 ASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239
Query: 620 ----LIPGCFEEMRSLSRIDIAYNEL 641
+ + ++ L + + Y+ +
Sbjct: 240 PSLENLKLLKDSLKHLQTVYLDYDIV 265
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 4e-06
Identities = 63/372 (16%), Positives = 110/372 (29%), Gaps = 86/372 (23%)
Query: 101 PHLMYLNLSCNVLYGNIPPQI-----SNLSKLRALDLGNNQLSGVIPQEIGHL-----TC 150
+ L+LS N LY ++ + + + +L+L N L E+ +
Sbjct: 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81
Query: 151 LRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLF 210
+ L N L L+ L + L L N
Sbjct: 82 VTSLNLSGNFLS-----YKSSDELVKTLAAIP--------------FTITVLDLGWNDFS 122
Query: 211 GS----IPNVMGNLN-SLSILDLSQNQL--RGSIPFSLA---NLSNLGILYLYKNSL--- 257
NL S++ L+L N L + S +N+ L L N+L
Sbjct: 123 SKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182
Query: 258 -FGFIPSVIGNL-KSLFELDLSENQL--FGSIPLSF---SNLSSLTLMSLFNNSLSGSIP 310
+ + ++ S+ LDLS N L L++ S + + ++L N L G
Sbjct: 183 NCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP-- 240
Query: 311 PTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL------ 364
+LE L L +L L+T+YL + + + L
Sbjct: 241 ----SLENLKLL--------------KDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPN 282
Query: 365 -KSLSKLELCRNH--------LSGVIPHSIGNLTKLVLVNMC--ENHLFGLIPKSFRNLT 413
+ + ++ +S +I G L+N C +
Sbjct: 283 IQKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSLLNQCLIFAQKHQTNIEDLNIPD 342
Query: 414 SLERLRFNQNNL 425
L L
Sbjct: 343 ELRESIQTCKPL 354
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 51/302 (16%), Positives = 100/302 (33%), Gaps = 68/302 (22%)
Query: 193 LGNLSNLAYLYLNNNSL----FGSIPNVMGNLN-SLSILDLSQNQLRGSIPFSLA----- 242
+ L L+ N+L + N S++ L+LS N L L
Sbjct: 18 TSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAA 77
Query: 243 NLSNLGILYLYKNSL-----FGFIPSVIGNLKSLFELDLSENQL--FGSIPLS---FSNL 292
+N+ L L N L + ++ ++ LDL N S +
Sbjct: 78 IPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLP 137
Query: 293 SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNG 352
+S+T ++L N L + + L ++ I +++ +L L N
Sbjct: 138 ASITSLNLRGNDLGIK------SSDELIQILAAIP-------------ANVNSLNLRGNN 178
Query: 353 FYGLVPNEIGYL-----KSLSKLELCRNH--------LSGVIPHSIGNLTKLVLVNMCEN 399
E+ S++ L+L N L+ + ++ L N+C N
Sbjct: 179 LASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSL---NLCLN 235
Query: 400 HL-------FGLIPKSFRNLTSLERLRFNQNNLFGK-----VYEAFGDHPNLTFLDLSQN 447
L L+ S ++L ++ L ++ K + AF + + +D +
Sbjct: 236 CLHGPSLENLKLLKDSLKHLQTV-YLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGK 294
Query: 448 NL 449
+
Sbjct: 295 EI 296
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 1e-07
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 40/262 (15%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
F +G+G G V+ + + ++A+K L D+ E L
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--DRVRTKMERDIL 80
Query: 814 TEIRHRNIIKFHGFC-SNAQHSFIVSEYLDRGSLTTILK-------DDAA--AKEFGWNQ 863
E+ H I+K H + +++ ++L G L T L +D E
Sbjct: 81 VEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE----- 134
Query: 864 RMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSS 920
+A AL +LH I++ D+ +N+LLD E H+ +DFG++K H
Sbjct: 135 -------LALALDHLHSLG----IIYRDLKPENILLDEE--GHIKLTDFGLSKESIDHEK 181
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT 980
+F GT Y APE+ + T+ D SFGVL E++ G P + + MI
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP--FQGKDRKETMTMIL 239
Query: 981 EINQNLDHRLPTPSRDVMDKLM 1002
+ + L ++ ++ L
Sbjct: 240 KAKLGMPQFLSPEAQSLLRMLF 261
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 1e-07
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF----LNEVLALTEIRHRNI 821
+G+G +VYK + + A+K+ + ++ + EV L +++H NI
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR-------LEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+ H + +V EYLD+ L L D + + + L+Y H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYL--DDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
++H D+ +N+L++ E ++DFG+A+ + + + T Y P+I
Sbjct: 120 K---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDI 171
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 2e-07
Identities = 55/251 (21%), Positives = 95/251 (37%), Gaps = 20/251 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
++DF +GKG G V +G +A+K +++ + + + E L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-EVAHTVTESRVLQNT 62
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VANAL 875
RH + V EY + G L L + E +R + +AL
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE----ERARFYGAEIVSAL 118
Query: 876 SYLH-HDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNWTA-FAGTFGY 931
YLH D +V+ DI +N++LD + H+ +DFG+ K F GT Y
Sbjct: 119 EYLHSRD----VVYRDIKLENLMLDK--DGHIKITDFGLCK-EGISDGATMKTFCGTPEY 171
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991
APE+ D GV+ E++ G P + + + +I L
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFELILMEEIRFPRTLS 229
Query: 992 TPSRDVMDKLM 1002
++ ++ L+
Sbjct: 230 PEAKSLLAGLL 240
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 2e-07
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 48/219 (21%)
Query: 736 PFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQ 794
P G + YE + + IG G G+VYKA + SG A+K
Sbjct: 2 PLGSMATSR------YEPVAE----------IGVGAYGTVYKARDPHSGHFVALKSVR-- 43
Query: 795 LLFDEMADQDEFLNEV--LALTEI---------RHRNIIK----FHGFCSNAQHS-FIVS 838
+ + + + E+ H N+++ ++ + +V
Sbjct: 44 -----VPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF 98
Query: 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL 898
E++D+ L T L D A ++++ L +LH +C IVH D+ +N+L+
Sbjct: 99 EHVDQ-DLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILV 153
Query: 899 DSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGYAAPEI 936
S ++DFG+A+ + T T Y APE+
Sbjct: 154 TSGGTVKLADFGLARIYSYQM--ALTPVVVTLWYRAPEV 190
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 50/226 (22%), Positives = 88/226 (38%), Gaps = 48/226 (21%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEVLALTEIR--H 818
+G G +V+ A+ + + A+K ++ E A +DE +N+ E
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAA-EDEIKLLQRVNDADNTKEDSMGA 85
Query: 819 RNIIK------FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR---MNVIK 869
+I+K G N H +V E L +L ++K + R + +K
Sbjct: 86 NHILKLLDHFNHKG--PNGVHVVMVFEVL-GENLLALIKK--------YEHRGIPLIYVK 134
Query: 870 GVA----NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH------VSDFGIAKFLNPHS 919
++ L Y+H C I+H DI +NVL++ ++D G A + + H
Sbjct: 135 QISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 920 SNW--TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNH 963
+N T Y +PE+ D+ S L E+I G+
Sbjct: 193 TNSIQTRE-----YRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 4e-07
Identities = 63/262 (24%), Positives = 103/262 (39%), Gaps = 38/262 (14%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
+ F +GKG G V++ +G IFA+K ++ D E L
Sbjct: 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 814 TEIRHRNIIKFHGFC-SNAQHSFIVSEYLDRGSLTTILK-------DDAA--AKEFGWNQ 863
E++H I+ + +++ EYL G L L+ D A E
Sbjct: 76 EEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE----- 129
Query: 864 RMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSS 920
++ AL +LH I++ D+ +N++L+ + HV +DFG+ K +
Sbjct: 130 -------ISMALGHLHQKG----IIYRDLKPENIMLNHQ--GHVKLTDFGLCKESIHDGT 176
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT 980
F GT Y APEI D S G L +++ G P + N + I
Sbjct: 177 VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--FTGENRKKTIDKIL 234
Query: 981 EINQNLDHRLPTPSRDVMDKLM 1002
+ NL L +RD++ KL+
Sbjct: 235 KCKLNLPPYLTQEARDLLKKLL 256
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 5e-07
Identities = 67/506 (13%), Positives = 135/506 (26%), Gaps = 77/506 (15%)
Query: 72 CNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQIS-NLSKLRAL 130
+ G + + SS+ L + L V+ + I+ + + L
Sbjct: 76 KPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVL 135
Query: 131 DLGN-NQLSGVIPQEIG-HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGR 188
L + S I L+ L L S ++ L +
Sbjct: 136 VLSSCEGFSTDGLAAIAATCRNLKEL-----DLRESDVDDVSGHWLSHFPDTYT------ 184
Query: 189 IPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG 248
+L +L L + F ++ ++ +L L L++ + L L
Sbjct: 185 ------SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLE 238
Query: 249 ILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGS 308
L + ++ + ++ S L +S F +++
Sbjct: 239 ELGTGGYT------------------AEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAY 280
Query: 309 IPPTQGNLEALSELGL-YINQLDGVIPPSIGNLSSLRTLYLY----DNGFYGLVPNEIGY 363
+P L+ L L Y + + L+ L++ D G L
Sbjct: 281 LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAST---- 336
Query: 364 LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
K L +L + + LT+ LV++ LE + +
Sbjct: 337 CKDLRELRVF--PSEPFVMEPNVALTEQGLVSVS------------MGCPKLESVLYFCR 382
Query: 424 NLFGKVYEAFGDH-PNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG 482
+ + PN+T L L + I
Sbjct: 383 QMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT------LEPLDIGFGAIVEHCK---- 432
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSG-GVPLEFGSLTELQYLDLS 541
L+ L LS + L + S G+ L+ L++
Sbjct: 433 ---DLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIR 489
Query: 542 ANKLSS-SIPKSMGNLSKLHYLNLSN 566
++ + L + L +S+
Sbjct: 490 DCPFGDKALLANASKLETMRSLWMSS 515
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 2e-06
Identities = 63/466 (13%), Positives = 131/466 (28%), Gaps = 63/466 (13%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
+ S+ L+G F+ NL G + ++ +I ++ + L E+ L
Sbjct: 67 KVRSVE--------LKGKPHFADFNLVPDG----WGGYVYPWIEAMSSSYTWLEEIRLKR 114
Query: 279 NQL----FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIP 334
+ I SF N L L S S G L EL L + +D V
Sbjct: 115 MVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAA-TCRNLKELDLRESDVDDVSG 173
Query: 335 PSIGNLS----SLRTLYLY-------DNGFYGLVPNEIGYLKSLSKLELCRN-HLSGVIP 382
+ + SL +L + + LV +L L+L R L +
Sbjct: 174 HWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTR----CPNLKSLKLNRAVPLEKLAT 229
Query: 383 HSIG--NLTKLVL---VNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHP 437
L +L ++ + + L L + + + +
Sbjct: 230 LLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCS 289
Query: 438 NLTFLDLSQNNLYGE-ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNH 496
LT L+LS + + PKL + L+ L + +
Sbjct: 290 RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSE 349
Query: 497 IVGKIPVQ----------FEKLFSLNKLILNLNQLSGGVPLEFG-SLTELQYLDLSANKL 545
P L ++ Q++ + + + L +
Sbjct: 350 PFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEP 409
Query: 546 SSSIPKSMG-----------NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
+ ++ + L L+LS + + L ++
Sbjct: 410 KAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDS 469
Query: 595 GEIPPQI-CNMESLEELNLSHNNLFDL-IPGCFEEMRSLSRIDIAY 638
+ +SL +L + D + ++ ++ + ++
Sbjct: 470 DLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSS 515
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 3e-05
Identities = 60/387 (15%), Positives = 112/387 (28%), Gaps = 72/387 (18%)
Query: 82 SLSSLGLNGTFQDFSFSSF-------PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGN 134
SL SL ++ + SFS+ P+L L L+ V + + +L L G
Sbjct: 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGG 244
Query: 135 NQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLG 194
+ + +L
Sbjct: 245 YTA------------------------------------------EVRPDVYSGLSVALS 262
Query: 195 NLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLY 253
L L +++ +P V + L+ L+LS ++ + L L L++
Sbjct: 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVL 322
Query: 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNS------LSG 307
+ + K L EL + ++ F + L+ L+S+ L
Sbjct: 323 DYIEDAGLEVLASTCKDLRELRVFPSEPF--VMEPNVALTEQGLVSVSMGCPKLESVLYF 380
Query: 308 SIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSL 367
T L ++ + + I TL D GF +V + K L
Sbjct: 381 CRQMTNAALITIARNRPNMTRFRLCI--IEPKAPDYLTLEPLDIGFGAIVEH----CKDL 434
Query: 368 SKLELCRNHLSGVIPHSIG----NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
+L L L+ + IG + L + + G+ SL +L
Sbjct: 435 RRLSLS-GLLTDKVFEYIGTYAKKMEMLSVAF-AGDSDLGMH-HVLSGCDSLRKLEIRDC 491
Query: 424 NLFGK-VYEAFGDHPNLTFLDLSQNNL 449
K + + L +S ++
Sbjct: 492 PFGDKALLANASKLETMRSLWMSSCSV 518
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 6e-07
Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 43/220 (19%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIK- 823
+G+G+ V++A + + VK + + E+ L +R NII
Sbjct: 44 LGRGKYSEVFEAINITNNEKVVVKILK---PVKK----KKIKREIKILENLRGGPNIITL 96
Query: 824 ---FHGFCSNAQHSFIVSEYLDRGSLTTILK--DDAAAKEFGWNQRMNVIKGVANALSYL 878
S + + E+++ + + D + + + + AL Y
Sbjct: 97 ADIVKDPVSR-TPALVF-EHVNNTDFKQLYQTLTDYDIRFY--------MYEILKALDYC 146
Query: 879 H-HDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
H I+H D+ NV++D EH + + D+G+A+F +P + + + PE+
Sbjct: 147 HSMG----IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP-GQEYNVRVASRYFKGPEL 201
Query: 937 AHMMRATEKY----DVHSFGVLALEVIKGNHP----RDYV 968
+ + Y D+ S G + +I P D
Sbjct: 202 ---LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 238
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 6e-07
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 42/268 (15%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
I++F +G G G V+ +G ++A+K + + + E L
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 814 TEIRHRN-IIKFHGFC-SNAQHSFIVSEYLDRGSLTTILK-------DDAA--AKEFGWN 862
IR ++ H + ++ +Y++ G L T L + E
Sbjct: 113 EHIRQSPFLVTLH-YAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGE---- 167
Query: 863 QRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAK-FLNPH 918
+ AL +LH I++ DI +N+LLD HV +DFG++K F+
Sbjct: 168 --------IVLALEHLHKLG----IIYRDIKLENILLD--SNGHVVLTDFGLSKEFVADE 213
Query: 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVH--SFGVLALEVIKGNHP--RDYVSTNFSS 974
+ F GT Y AP+I + V S GVL E++ G P D + +
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273
Query: 975 FSNMITEINQNLDHRLPTPSRDVMDKLM 1002
S I + + ++D++ +L+
Sbjct: 274 ISRRILKSEPPYPQEMSALAKDLIQRLL 301
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 1e-06
Identities = 28/209 (13%), Positives = 50/209 (23%), Gaps = 50/209 (23%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKF----NSQLLFDEMADQDEFLNEVLALTEI------ 816
IG+G G V++ A+K + +E L E++ E+
Sbjct: 28 IGEGVFGEVFQTIAD-HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGE 86
Query: 817 ---RHRNIIKFHGFC------------------------------SNAQHSFIVSEYLDR 843
R I + FIV E+
Sbjct: 87 VCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFG 146
Query: 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE 903
G + K +++ + +L+ H D+ NVLL
Sbjct: 147 GIDL----EQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHWGNVLLKKTSL 200
Query: 904 AHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
+ K S + +
Sbjct: 201 KKLHYTLNGKSSTIPSCGLQVSIIDYTLS 229
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 68/260 (26%), Positives = 108/260 (41%), Gaps = 28/260 (10%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALT 814
+ DF IG+G V L + I+A+K +L+ D+ D D E V
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE-DIDWVQTEKHVFEQA 66
Query: 815 EIRHRNIIKFHGFC-SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
H ++ H C F V EY++ G L ++ ++ ++
Sbjct: 67 -SNHPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISL 121
Query: 874 ALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAK-FLNPHSSNWTAFAGTF 929
AL+YLH I++ D+ NVLLDS E H+ +D+G+ K L P + T F GT
Sbjct: 122 ALNYLHERG----IIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTST-FCGTP 174
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN-LDH 988
Y APEI D + GVL E++ G P D V ++ + N + Q L+
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 234
Query: 989 RLPTP------SRDVMDKLM 1002
++ P + V+ +
Sbjct: 235 QIRIPRSLSVKAASVLKSFL 254
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-06
Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 24/258 (9%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALT 814
+ DF IG+G V L + I+A++ +L+ D+ D D E V
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDE-DIDWVQTEKHVFEQA 109
Query: 815 EIRHRNIIKFHGFC-SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
H ++ H C F V EY++ G L ++ ++ ++
Sbjct: 110 -SNHPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISL 164
Query: 874 ALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFGY 931
AL+YLH I++ D+ NVLLDSE ++D+G+ K L P + T F GT Y
Sbjct: 165 ALNYLHERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNY 219
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN-LDHRL 990
APEI D + GVL E++ G P D V ++ + N + Q L+ ++
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279
Query: 991 PTP------SRDVMDKLM 1002
P + V+ +
Sbjct: 280 RIPRSLSVKAASVLKSFL 297
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 66/287 (22%), Positives = 108/287 (37%), Gaps = 82/287 (28%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-F 824
+G+G G V A P+G I A+KK FD+ L E+ L +H NII F
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEP---FDKPLFALRTLREIKILKHFKHENIITIF 75
Query: 825 HGFCSNAQHSF----IVSEYLDRGSLTTILKDDAAAKEFGWNQRMN----------VIKG 870
+ ++ +F I+ E + L ++ Q ++ ++
Sbjct: 76 NIQRPDSFENFNEVYIIQELMQT-DLHRVIS----------TQMLSDDHIQYFIYQTLRA 124
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
+ LH ++H D+ N+L++S + V DFG+A+ ++ +++ + G
Sbjct: 125 ----VKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 931 ----------YAAPEIAHMMRATEKY----DVHSFGVLALEVIKGNHP----RDYVSTNF 972
Y APE+ M + KY DV S G + E+ P RDY
Sbjct: 178 GMVEFVATRWYRAPEV---MLTSAKYSRAMDVWSCGCILAELFLR-RPIFPGRDYRHQ-- 231
Query: 973 SSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR 1019
+I I + TP D L +ESP AR
Sbjct: 232 ---LLLIFGI-------IGTPHSD-----------NDLRCIESPRAR 257
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 2e-06
Identities = 52/239 (21%), Positives = 86/239 (35%), Gaps = 59/239 (24%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-- 823
+G G G V + ++ SG FA+KK + D E+ + + H NIIK
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKV--------LQDPRYKNRELDIMKVLDHVNIIKLV 66
Query: 824 --FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN--------------- 866
F+ + ++ ++ +
Sbjct: 67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHK 126
Query: 867 VIKGVAN-------------------ALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHV 906
V+K A+ ++H I H DI +N+L++S+ + +
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKL 183
Query: 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE---KYDVHSFG-VLALEVIKG 961
DFG AK L P + A+ + Y APE+ M+ ATE D+ S G V E+I G
Sbjct: 184 CDFGSAKKLIPSEPS-VAYICSRFYRAPEL--MLGATEYTPSIDLWSIGCVFG-ELILG 238
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 23/253 (9%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALT 814
I+DF +GKG G V+ AE + FA+K ++ + D + + E VL+L
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDD-DVECTMVEKRVLSLA 74
Query: 815 EIRHRNIIKFHGFCS-NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
H + ++ F V EYL+ G L ++ +F ++ +
Sbjct: 75 -WEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIIL 129
Query: 874 ALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAK-FLNPHSSNWTAFAGTF 929
L +LH IV+ D+ N+LLD + H+ +DFG+ K + + T F GT
Sbjct: 130 GLQFLHSKG----IVYRDLKLDNILLDK--DGHIKIADFGMCKENMLGDAKTNT-FCGTP 182
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
Y APEI + D SFGVL E++ G P + + + I N
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP--FHGQDEEELFHSIRMDNPFYPRW 240
Query: 990 LPTPSRDVMDKLM 1002
L ++D++ KL
Sbjct: 241 LEKEAKDLLVKLF 253
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 3e-06
Identities = 36/185 (19%), Positives = 70/185 (37%), Gaps = 43/185 (23%)
Query: 759 DDFGEKYC----IGKGRQGSVYKAELPSGIIFAVK--------KFNSQLLFDEM-----A 801
D + IG+G G +Y A++ S ++ LF E+ A
Sbjct: 31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRA 90
Query: 802 DQDEFLNEVLALTEIRHRNIIKFHGF----CSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
+ E + + + ++++ + K+ G + + F++ + L I
Sbjct: 91 AKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGS-DLQKI-------- 141
Query: 858 EFGWNQRMNVIKGVA-------NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV--SD 908
+ N + K V + L Y+H VHGDI + N+LL+ ++ V D
Sbjct: 142 -YEANAKRFSRKTVLQLSLRILDILEYIHEHEY---VHGDIKASNLLLNYKNPDQVYLVD 197
Query: 909 FGIAK 913
+G+A
Sbjct: 198 YGLAY 202
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 5e-06
Identities = 63/259 (24%), Positives = 103/259 (39%), Gaps = 35/259 (13%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALT 814
ID+F +GKG G V A + +G ++AVK ++ + D + + E +L+L
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDD-DVECTMTEKRILSLA 80
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL------TTILKDDAA---AKEFGWNQRM 865
H + + F V E+++ G L + + A A E
Sbjct: 81 -RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE------- 132
Query: 866 NVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWT 923
+ +AL +LH I++ D+ NVLLD E ++DFG+ K + + T
Sbjct: 133 -----IISALMFLHDKG----IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT 183
Query: 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983
F GT Y APEI M D + GVL E++ G+ P + + N I
Sbjct: 184 -FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP--FEAENEDDLFEAILNDE 240
Query: 984 QNLDHRLPTPSRDVMDKLM 1002
L + ++ M
Sbjct: 241 VVYPTWLHEDATGILKSFM 259
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 7e-06
Identities = 67/261 (25%), Positives = 103/261 (39%), Gaps = 39/261 (14%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALT 814
+ DF +GKG G V +E + ++AVK ++ + D + + E VLAL
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDD-DVECTMVEKRVLALP 77
Query: 815 EIRHRNIIKFHGFC-SNAQHSFIVSEYLDRGSL------TTILKDDAA---AKEFGWNQR 864
+ + + H C + V EY++ G L K+ A A E
Sbjct: 78 G-KPPFLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE------ 129
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNW 922
+A L +L I++ D+ NV+LDSE H+ +DFG+ K N
Sbjct: 130 ------IAIGLFFLQSK---GIIYRDLKLDNVMLDSE--GHIKIADFGMCK-ENIWDGVT 177
Query: 923 TA-FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981
T F GT Y APEI + D +FGVL E++ G P + + I E
Sbjct: 178 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP--FEGEDEDELFQSIME 235
Query: 982 INQNLDHRLPTPSRDVMDKLM 1002
N + + + LM
Sbjct: 236 HNVAYPKSMSKEAVAICKGLM 256
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 48.4 bits (114), Expect = 7e-06
Identities = 24/155 (15%), Positives = 63/155 (40%), Gaps = 21/155 (13%)
Query: 484 SSKLQVLDLSSNHIVGKIP--VQFEKLFSLNKLILNLNQLSGGVP---------LEFGSL 532
L+ L++ S + + + L +L KL+L + G
Sbjct: 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRF 251
Query: 533 TELQYLDLSANKLSSSIPKSMGN---LSKLHYLNLSNNQFNHK----IPTEFEKLIHLSE 585
L++L + + + + + L +L +++S + + +K+ HL
Sbjct: 252 PNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKF 311
Query: 586 LDLSHNFLQGEIPPQICNMESLE-ELNLSHNNLFD 619
+++ +N+L E+ ++ +SL ++++S + +D
Sbjct: 312 INMKYNYLSDEMKKELQ--KSLPMKIDVSDSQEYD 344
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 6e-05
Identities = 32/281 (11%), Positives = 69/281 (24%), Gaps = 42/281 (14%)
Query: 16 TFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLV 75
FS ++ K + + + ++
Sbjct: 42 NFSSAGEAEKAAGKLIAEKTKKGYVETLEEVAKEMKVEAKKYALSYDEAEEGVNLMDKIL 101
Query: 76 GRVISISLSSLGLNGTFQDF------------SFSSFPHLMYLNLSCNVLY--------- 114
SL + + + + F H L
Sbjct: 102 KDKKLPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQ 161
Query: 115 GNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSL 174
++ P + + L L + + + L+ L L S+ +I L
Sbjct: 162 VDLSPVLDAMPLLNNLKIKGTNNLSIGKK---PRPNLKSLEIISGGLPDSVVEDILGSDL 218
Query: 175 IN----VLTLCHNNFSGRIPP-------SLGNLSNLAYLYLNNNSLFGSIPNVMGN---L 220
N VL + ++ S NL +L + + + + L
Sbjct: 219 PNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDIL 278
Query: 221 NSLSILDLSQNQLRGS----IPFSLANLSNLGILYLYKNSL 257
L +D+S L + + + +L + + N L
Sbjct: 279 PQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 8e-06
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 43/263 (16%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALT 814
DF IGKG G V A + +AVK + + + ++ ++E VL
Sbjct: 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK-EEKHIMSERNVLLKN 95
Query: 815 EIRHRNIIKFHGFC-SNAQHSFIVSEYLDRGSLTTILK-------DDA---AAKEFGWNQ 863
++H ++ H F A + V +Y++ G L L+ A AA+
Sbjct: 96 -VKHPFLVGLH-FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAE------ 147
Query: 864 RMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAK-FLNPHS 919
+A+AL YLH + IV+ D+ +N+LLDS + H+ +DFG+ K + +S
Sbjct: 148 -------IASALGYLHSLN----IVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNS 194
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979
+ T F GT Y APE+ H D G + E++ G P + S N + + I
Sbjct: 195 TTST-FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP--FYSRNTAEMYDNI 251
Query: 980 TEINQNLDHRLPTPSRDVMDKLM 1002
L + +R +++ L+
Sbjct: 252 LNKPLQLKPNITNSARHLLEGLL 274
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 9e-06
Identities = 56/307 (18%), Positives = 105/307 (34%), Gaps = 73/307 (23%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-F 824
IG G G V +A + + A+KK +F+++ D L E+ L + H +++K
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKIL--RVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 825 HGFCSNAQHSF----IVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKGVANAL 875
F +V E D + + + K + N++ G +
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTELHIKTLLY----NLLVG----V 169
Query: 876 SYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---- 930
Y+H I+H D+ N L++ + V DFG+A+ ++ + + +
Sbjct: 170 KYVHSAG----ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 931 -----------------------YAAPEIAHMMRATEKY----DVHSFG-VLALEVIKGN 962
Y APE+ + E Y DV S G + A E++
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPEL---ILLQENYTEAIDVWSIGCIFA-ELLNMI 281
Query: 963 HPRDYVSTN----FSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEV------AILCL 1012
+ F S +Q + +R D+L I + +
Sbjct: 282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEA 341
Query: 1013 VESPEAR 1019
+E +A+
Sbjct: 342 LEKEDAK 348
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 61/298 (20%), Positives = 101/298 (33%), Gaps = 63/298 (21%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK-F 824
IG+G G VY A + + A+KK N +F+++ D L E+ L ++ II+ +
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNR--MFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 825 HGFCSNAQHSF----IVSEYLDRGSLTTILK-----DDAAAKEFGWNQRMNVIKGVANAL 875
+ F IV E D L + K + K + N++ G
Sbjct: 92 DLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILY----NLLLG----E 142
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG----- 930
+++H I+H D+ N LL+ + V DFG+A+ +N
Sbjct: 143 NFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 931 -----------------YAAPEIAHMMRATEKY----DVHSFG-VLALEVIKGNHPRDYV 968
Y APE+ + E Y D+ S G + A E++
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPEL---ILLQENYTKSIDIWSTGCIFA-ELLNMLQSHIND 255
Query: 969 STNFSS-FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEV------AILCLVESPEAR 1019
TN F + + D+L I + L + PE
Sbjct: 256 PTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVI 313
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 767 IGKGRQGSVYKA--ELPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEVLALTEIR-- 817
IG+G G V+KA G A+K+ + +E + EV L +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVR-------VQTGEEGMPLSTIREVAVLRHLETF 71
Query: 818 -HRNIIK----FHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
H N+++ ++ + +V E++D+ LTT L D +++ +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVPTETIKDMMFQL 129
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFG 930
L +LH +VH D+ +N+L+ S + ++DFG+A+ + T+ T
Sbjct: 130 LRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLW 184
Query: 931 YAAPEI 936
Y APE+
Sbjct: 185 YRAPEV 190
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 3e-05
Identities = 36/171 (21%), Positives = 64/171 (37%), Gaps = 38/171 (22%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFA-----VKKFNSQLLFDEM-----ADQDEFLNEVLALTE 815
IG G G +Y A A V+ + LF E+ + + + + + +
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104
Query: 816 IRHRNIIKFHGF----CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
+ + I F+G + F+V E L L I G N V
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERLGI-DLQKI---------SGQNGTFK-KSTV 153
Query: 872 A-------NALSYLHHDCLPPIVHGDISSKNVLLD--SEHEAHVSDFGIAK 913
+ L Y+H + VHGDI + N+LL + + +++D+G++
Sbjct: 154 LQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSY 201
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 5e-05
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 36/228 (15%)
Query: 754 IIKAIDDFGEKYCI----GKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLN 808
I+K + + ++Y I GKG G V KA A+K ++ F A
Sbjct: 45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-----QI 99
Query: 809 EVLALTEIRHR------NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
EV L + I+ H +V E L +L +L++ G +
Sbjct: 100 EVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT---NFRGVS 155
Query: 863 QRMNVIKGVA----NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH--VSDFGIAKFLN 916
+N+ + A AL +L L I+H D+ +N+LL + + + DFG + L
Sbjct: 156 --LNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212
Query: 917 PHSSNW--TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN 962
+ + F Y +PE+ M D+ S G + +E+ G
Sbjct: 213 QRIYQYIQSRF-----YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 8e-05
Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 41/184 (22%)
Query: 759 DDFGEKYC----IGKGRQGSVYKAE---------LPSGIIFAVK--KFNSQLL----FDE 799
D G ++ + QG +Y+A P F++K + +L F +
Sbjct: 38 DKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQ 97
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSN-AQHSFIVSEYLDRGSLTTILKDDAAAKE 858
A + +N+ L I GF + ++ F+V L R SL + L D +
Sbjct: 98 RAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGR-SLQSAL-DVSPKHV 155
Query: 859 FGWNQRMNVIKGVA-------NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV--SDF 909
+ V +AL +LH + VHG+++++N+ +D E ++ V + +
Sbjct: 156 LS-------ERSVLQVACRLLDALEFLHENEY---VHGNVTAENIFVDPEDQSQVTLAGY 205
Query: 910 GIAK 913
G A
Sbjct: 206 GFAF 209
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 1e-04
Identities = 35/232 (15%), Positives = 66/232 (28%), Gaps = 36/232 (15%)
Query: 370 LELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV 429
R+ + + + + + L+ L L +
Sbjct: 75 FRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPI 134
Query: 430 YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQV 489
+ NL L+LS + S ++ + S +L
Sbjct: 135 VNTLAKNSNLVRLNLSGCS---GFS------------EFALQTLLSSCS-------RLDE 172
Query: 490 LDLSSNHIVGKIPVQFEKLFSLNKL-ILNLNQLSG-----GVPLEFGSLTELQYLDLS-A 542
L+LS + VQ + LNL+ + L +LDLS +
Sbjct: 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDS 232
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP----TEFEKLIHLSELDLSH 590
L + + L+ L +L+LS + I E ++ L L +
Sbjct: 233 VMLKNDCFQEFFQLNYLQHLSLSR---CYDIIPETLLELGEIPTLKTLQVFG 281
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 4e-04
Identities = 40/214 (18%), Positives = 69/214 (32%), Gaps = 30/214 (14%)
Query: 759 DDFGEKYCI----GKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
D F +Y + G G +V+ + + A+K S + E A L+E+ L
Sbjct: 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETA-----LDEIRLL 87
Query: 814 TEIR--------HRNIIK------FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
+R +++ G N H +V E L L + +
Sbjct: 88 KSVRNSDPNDPNREMVVQLLDDFKISG--VNGTHICMVFEVL-GHHLLK-WIIKSNYQGL 143
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+I+ V L YLH C I+H DI +N+LL + A
Sbjct: 144 PLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSG 201
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGV 953
+ + + A ++ E + V
Sbjct: 202 APPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKV 235
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1031 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.97 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.97 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.94 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.94 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.93 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.93 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.91 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.91 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.91 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.91 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.91 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.91 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.9 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.89 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.89 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.89 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.89 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.89 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.88 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.88 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.88 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.87 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.87 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.87 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.86 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.86 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.85 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.85 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.82 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.82 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.82 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.81 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.81 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.8 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.79 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.79 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.79 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.78 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.78 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.78 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.78 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.77 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.77 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.77 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.76 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.75 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.75 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.74 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.71 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.71 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.7 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.68 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.66 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.65 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.63 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.63 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.63 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.62 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.62 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.6 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.6 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.6 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.59 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.56 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.54 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.53 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.52 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.46 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.43 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.43 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.42 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.34 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.31 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.26 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.26 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.23 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.2 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.16 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 99.04 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.03 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.0 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.98 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.95 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.91 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.91 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.74 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.6 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.47 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.38 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.33 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.26 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.18 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.12 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.11 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.8 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.67 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.67 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.63 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.6 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.57 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.33 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.2 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.2 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.16 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.16 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.13 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.03 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.99 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.92 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.8 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.77 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.53 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.22 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.16 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 96.15 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 95.51 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 95.42 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 94.84 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 92.95 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 92.27 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 88.62 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 87.66 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 84.38 | |
| 4ano_A | 219 | ESSB; membrane protein, membrane secretion, ESS ty | 82.36 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-89 Score=859.24 Aligned_cols=637 Identities=31% Similarity=0.475 Sum_probs=559.8
Q ss_pred cccCCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEecCCccccc---cCC--
Q 043316 20 NVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGT---FQD-- 94 (1031)
Q Consensus 20 ~~~~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~---~~~-- 94 (1031)
+++.+.++|++|||+||+++. ||. .++||+ .++|||+|+||+|+ .|||++|+|++.++.|. +++
T Consensus 5 ~~~~~~~~~~~all~~k~~~~--~~~--~l~~W~------~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l 73 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP--DKN--LLPDWS------SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSL 73 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS--CTT--SSTTCC------TTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHHhhCC--Ccc--cccCCC------CCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhH
Confidence 344557889999999999998 663 799997 57899999999998 69999999999999997 553
Q ss_pred --------------------ccccCCCcccEEecCCCcCcCCCcc--ccccCCcCcEeeCCCCcccCCCCccc-cccccc
Q 043316 95 --------------------FSFSSFPHLMYLNLSCNVLYGNIPP--QISNLSKLRALDLGNNQLSGVIPQEI-GHLTCL 151 (1031)
Q Consensus 95 --------------------~~~~~l~~l~~L~l~~n~~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L 151 (1031)
..|+++++|++|||++|.++|.+|. .++++++|++|||++|.+++.+|..+ +++++|
T Consensus 74 ~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L 153 (768)
T 3rgz_A 74 LSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSL 153 (768)
T ss_dssp TTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTC
T ss_pred hccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCC
Confidence 3578888888888888888888888 88888888888888888888888776 788888
Q ss_pred eEEEeeccccCCCCCcc---ccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccc
Q 043316 152 RMLYFDVNHLHGSIPLE---IGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDL 228 (1031)
Q Consensus 152 ~~L~l~~n~l~~~~p~~---~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 228 (1031)
++|+|++|++++..|.. ++++++|++|+|++|.+++.+|. +++++|++|++++|++++.+|. ++++++|++|+|
T Consensus 154 ~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 154 EVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp SEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred CEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 88888888888777776 78888888888888888876664 7788888888888888877777 888888999999
Q ss_pred cccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccC-CCCCeeeeccCccCC
Q 043316 229 SQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNL-SSLTLMSLFNNSLSG 307 (1031)
Q Consensus 229 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~ 307 (1031)
++|++++.+|..++++++|++|+|++|.+++.+|.. .+++|++|+|++|++++.+|..+... ++|++|+|++|++++
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~ 308 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEE
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCC
Confidence 988888888888888888899998888888877765 78888888888888888888887765 889999999999888
Q ss_pred CCCCCCCChhhhhhhhccccccCCCCccc-ccccccCceEEcccCCCcCccCCccCccc-ccceEEccccccCCCccccc
Q 043316 308 SIPPTQGNLEALSELGLYINQLDGVIPPS-IGNLSSLRTLYLYDNGFYGLVPNEIGYLK-SLSKLELCRNHLSGVIPHSI 385 (1031)
Q Consensus 308 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~ 385 (1031)
.+|..++++++|++|++++|.+.|.+|.. ++.+++|++|++++|++++.+|..+..++ +|+.|++++|++++.+|..+
T Consensus 309 ~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~ 388 (768)
T 3rgz_A 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTT
T ss_pred ccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhh
Confidence 88888888899999999999888888866 88888999999999988888888888887 88999999998888888877
Q ss_pred cC--CCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCcc
Q 043316 386 GN--LTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKL 463 (1031)
Q Consensus 386 ~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L 463 (1031)
.. +++|++|++++|++++..|..|.++++|++|++++|++.+..+..|..+++|+.|++++|++++..+..+..+++|
T Consensus 389 ~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 468 (768)
T 3rgz_A 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 468 (768)
T ss_dssp TCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred hhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCc
Confidence 76 7889999999999998889999999999999999999988888899999999999999999998888888899999
Q ss_pred ccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcC
Q 043316 464 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543 (1031)
Q Consensus 464 ~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 543 (1031)
++|++++|.+.+.+|..+..+++|++|+|++|++++.+|.+|+.+++|+.|+|++|++++.+|..+..+++|++|++++|
T Consensus 469 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 548 (768)
T 3rgz_A 469 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSS
T ss_pred eEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCC
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccc----------------------------------------------------------------------
Q 043316 544 KLSSSIPKSM---------------------------------------------------------------------- 553 (1031)
Q Consensus 544 ~l~~~~p~~~---------------------------------------------------------------------- 553 (1031)
++++.+|..+
T Consensus 549 ~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~ 628 (768)
T 3rgz_A 549 LFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628 (768)
T ss_dssp EEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSC
T ss_pred ccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhh
Confidence 8887766543
Q ss_pred cCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceE
Q 043316 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSR 633 (1031)
Q Consensus 554 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 633 (1031)
..+++|++|+|++|++++.+|..|+.+++|+.|+|++|+++|.+|..|+++++|+.|+|++|++++.+|..+..+++|++
T Consensus 629 ~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 708 (768)
T 3rgz_A 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 708 (768)
T ss_dssp SSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSE
T ss_pred hccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccccCCCCCCCCc---ccccccCCCCccCCCCCCCCCCc
Q 043316 634 IDIAYNELQGPIPNSTAF---KDGLMEGNKGLCGNFKALPSCDA 674 (1031)
Q Consensus 634 L~l~~N~l~~~~p~~~~~---~~~~~~~n~~~c~~~~~~~~c~~ 674 (1031)
||+++|+++|.||...+| ....|.||+++||.+ .++|..
T Consensus 709 L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~--l~~C~~ 750 (768)
T 3rgz_A 709 IDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP--LPRCDP 750 (768)
T ss_dssp EECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT--SCCCCS
T ss_pred EECcCCcccccCCCchhhccCCHHHhcCCchhcCCC--CcCCCC
Confidence 999999999999988764 557899999999975 347864
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-72 Score=697.45 Aligned_cols=562 Identities=33% Similarity=0.447 Sum_probs=512.2
Q ss_pred CCEEEEEecCCccccccCCc-cccCCCcccEEecCCCcCcCCCcccc-ccCCcCcEeeCCCCcccCCCCcc---cccccc
Q 043316 76 GRVISISLSSLGLNGTFQDF-SFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQE---IGHLTC 150 (1031)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~-~~~~l~~l~~L~l~~n~~~~~~p~~~-~~l~~L~~L~l~~n~l~~~~p~~---~~~l~~ 150 (1031)
.+.+.|+|+++.+.|.+|.. .++++++|++|+|++|.+++.+|..+ +++++|++|||++|++++..|.. ++++++
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 46788999999999998872 49999999999999999999999877 89999999999999999888877 889999
Q ss_pred ceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccc
Q 043316 151 LRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQ 230 (1031)
Q Consensus 151 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 230 (1031)
|++|++++|.+++.+|. +.+++|++|+|++|.+++.+|. ++++++|++|++++|++++.+|..++++++|++|+|++
T Consensus 180 L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~ 256 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256 (768)
T ss_dssp CCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCS
T ss_pred CCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCC
Confidence 99999999999987765 8899999999999999988887 99999999999999999999999999999999999999
Q ss_pred cccccccCccccccCcccEEEeecCcCCCCCCcccccc-ccccccccccccccccCCcccccCCCCCeeeeccCccCCCC
Q 043316 231 NQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNL-KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSI 309 (1031)
Q Consensus 231 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 309 (1031)
|++++.+|.. .+++|++|+|++|++++.+|..+..+ ++|++|+|++|++++.+|..|+++++|++|++++|+++|.+
T Consensus 257 n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~i 334 (768)
T 3rgz_A 257 NQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334 (768)
T ss_dssp SCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred CcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcC
Confidence 9999888875 88999999999999998889888775 99999999999999999999999999999999999999888
Q ss_pred CCC-CCChhhhhhhhccccccCCCCcccccccc-cCceEEcccCCCcCccCCccCc--ccccceEEccccccCCCccccc
Q 043316 310 PPT-QGNLEALSELGLYINQLDGVIPPSIGNLS-SLRTLYLYDNGFYGLVPNEIGY--LKSLSKLELCRNHLSGVIPHSI 385 (1031)
Q Consensus 310 p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~p~~~ 385 (1031)
|.. ++++++|++|++++|++++.+|..+.+++ +|++|++++|++++.+|..+.. +++|++|++++|++++.+|..+
T Consensus 335 p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l 414 (768)
T 3rgz_A 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414 (768)
T ss_dssp CHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGG
T ss_pred CHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHH
Confidence 876 88999999999999999999999999887 8999999999999888888877 8889999999999998999999
Q ss_pred cCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCcccc
Q 043316 386 GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGT 465 (1031)
Q Consensus 386 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 465 (1031)
+++++|++|++++|++++..|..|..+++|++|++++|.+.+..+..+..+++|+.|++++|++++..+..+.++++|++
T Consensus 415 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 494 (768)
T 3rgz_A 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494 (768)
T ss_dssp GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred hcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCE
Confidence 99999999999999999999999999999999999999999888999999999999999999999888888999999999
Q ss_pred ccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCccc-----------------
Q 043316 466 FNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE----------------- 528 (1031)
Q Consensus 466 L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~----------------- 528 (1031)
|++++|++.+.+|..++.+++|++|+|++|++++.+|..+..+++|+.|++++|++++.+|..
T Consensus 495 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 574 (768)
T 3rgz_A 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCE
T ss_pred EEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999988777754
Q ss_pred -----------------------------------------------------ccccCccceeecCcCcCCCCCcccccC
Q 043316 529 -----------------------------------------------------FGSLTELQYLDLSANKLSSSIPKSMGN 555 (1031)
Q Consensus 529 -----------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 555 (1031)
+..+++|++|||++|+++|.+|..+++
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~ 654 (768)
T 3rgz_A 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654 (768)
T ss_dssp EEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc
Confidence 334578999999999999999999999
Q ss_pred CCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEe
Q 043316 556 LSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRID 635 (1031)
Q Consensus 556 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 635 (1031)
+++|++|+|++|++++.+|..|+.+++|+.||||+|+++|.+|..+..+++|++|+|++|+++|.+|.. ..+.++....
T Consensus 655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~ 733 (768)
T 3rgz_A 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAK 733 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGG
T ss_pred cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998864 2344455556
Q ss_pred cccccccC
Q 043316 636 IAYNELQG 643 (1031)
Q Consensus 636 l~~N~l~~ 643 (1031)
+.+|+--|
T Consensus 734 ~~gN~~Lc 741 (768)
T 3rgz_A 734 FLNNPGLC 741 (768)
T ss_dssp GCSCTEEE
T ss_pred hcCCchhc
Confidence 78887444
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-64 Score=624.71 Aligned_cols=569 Identities=24% Similarity=0.265 Sum_probs=356.6
Q ss_pred CEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEe
Q 043316 77 RVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156 (1031)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 156 (1031)
+++.|+|+++++.+ +++..|+++++|++|+|++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|++
T Consensus 26 ~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 26 NITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 45556666665554 23333556666666666666666555555666666666666666665333334666666666666
Q ss_pred eccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccc--cccccccccccccccc
Q 043316 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMG--NLNSLSILDLSQNQLR 234 (1031)
Q Consensus 157 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~ 234 (1031)
++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+++..|..++ .+++|++|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 66666544445566666666666666666655555566666666666666666554444433 3355666666666666
Q ss_pred cccCccccccCcccEEEeecCcCCCCCCcccc---ccccccccccccccccccCCcccccCCC--CCeeeeccCccCCCC
Q 043316 235 GSIPFSLANLSNLGILYLYKNSLFGFIPSVIG---NLKSLFELDLSENQLFGSIPLSFSNLSS--LTLMSLFNNSLSGSI 309 (1031)
Q Consensus 235 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~ 309 (1031)
+..|..+..+++|+.|++++|.+.+.....+. ..++|+.|++++|++++..|..|.+++. |+.|++++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 55555566666666666665554422111111 1256666777777776666666666644 777777777776666
Q ss_pred CCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcC-----ccCC----ccCcccccceEEccccccCCC
Q 043316 310 PPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYG-----LVPN----EIGYLKSLSKLELCRNHLSGV 380 (1031)
Q Consensus 310 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p~----~~~~l~~L~~L~L~~N~l~~~ 380 (1031)
|..++++++|++|++++|++.+..|..|+.+++|++|++++|...+ .+|. .|..+++|++|++++|++++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 6667777777777777777776666667777777777776654432 1222 456667777777777777766
Q ss_pred ccccccCCCCCceEeccCcccC--CcCchhccCC--ccccceeccccccccccccccCCCCCCCeeccccccccC-cccc
Q 043316 381 IPHSIGNLTKLVLVNMCENHLF--GLIPKSFRNL--TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG-EISF 455 (1031)
Q Consensus 381 ~p~~~~~l~~L~~L~l~~N~l~--~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~ 455 (1031)
.+..|.++++|++|++++|.+. .+....|..+ ++|+.|++++|++.++.+.+|..+++|+.|+|++|.+++ +...
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 6666777777777777776532 2333334433 367777777777777766677777777777777777664 3335
Q ss_pred cccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCccc--CCChhhhhccccCceeecccccccCCCcccccccC
Q 043316 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIV--GKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLT 533 (1031)
Q Consensus 456 ~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 533 (1031)
.|.+++.|++|++++|.+.+..+..|..+++|+.|++++|.+. +..|..|..+++|+.|++++|++++..+..|.+++
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 504 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccc
Confidence 6666777777777777776666666777777777777777665 45566677777777777777777766666677777
Q ss_pred ccceeecCcCcCCCCCc--------ccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcc
Q 043316 534 ELQYLDLSANKLSSSIP--------KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNME 605 (1031)
Q Consensus 534 ~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 605 (1031)
+|++|+|++|++++..+ ..|.++++|++|+|++|+|+.+.+..|.++++|+.|||++|+|++..+..|..++
T Consensus 505 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~ 584 (680)
T 1ziw_A 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQV 584 (680)
T ss_dssp TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCC
Confidence 77777777777664311 2256667777777777777655555677777777777777777755555566677
Q ss_pred cchhhhcCCCccCCCCccccc-cCCcceEEecccccccCCCC
Q 043316 606 SLEELNLSHNNLFDLIPGCFE-EMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 606 ~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~p 646 (1031)
+|+.|+|++|+|++..+..|. .+++|+.+++++|+|.|..+
T Consensus 585 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 585 SLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 777777777777776666665 56677777777777766543
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-63 Score=617.23 Aligned_cols=579 Identities=25% Similarity=0.238 Sum_probs=510.8
Q ss_pred EecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeecccc
Q 043316 82 SLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161 (1031)
Q Consensus 82 ~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l 161 (1031)
|.++.+++ .+|.. +. +++++|+|++|.+++..|..++++++|++|+|++|.+++..|..++++++|++|+|++|++
T Consensus 10 ~cs~~~L~-~ip~~-~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 85 (680)
T 1ziw_A 10 DCSHLKLT-QVPDD-LP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85 (680)
T ss_dssp ECCSSCCS-SCCSC-SC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCC
T ss_pred ECCCCCcc-ccccc-cC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCcc
Confidence 34444443 34543 32 7899999999999987777899999999999999999999999999999999999999999
Q ss_pred CCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccc
Q 043316 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSL 241 (1031)
Q Consensus 162 ~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 241 (1031)
++..+..|+++++|++|+|++|++++..|..|+++++|++|++++|.+++..|..++++++|++|+|++|++++..|..+
T Consensus 86 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 165 (680)
T 1ziw_A 86 SQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEEL 165 (680)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHH
T ss_pred CccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHh
Confidence 94434479999999999999999997777899999999999999999999889999999999999999999997777665
Q ss_pred c--ccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccc---cCCCCCeeeeccCccCCCCCCCCCCh
Q 043316 242 A--NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFS---NLSSLTLMSLFNNSLSGSIPPTQGNL 316 (1031)
Q Consensus 242 ~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~~~l 316 (1031)
. .+++|+.|++++|.+++..|..+..+++|+.|++++|++.+.....+. ..++|+.|++++|.+++..|..+.++
T Consensus 166 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l 245 (680)
T 1ziw_A 166 DIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL 245 (680)
T ss_dssp GGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGG
T ss_pred hccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhcc
Confidence 4 568999999999999999999999999999999999988743332221 35899999999999999999999998
Q ss_pred hh--hhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCC-----Cccc----cc
Q 043316 317 EA--LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSG-----VIPH----SI 385 (1031)
Q Consensus 317 ~~--L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p~----~~ 385 (1031)
+. |++|++++|++++..|..|+.+++|++|++++|.+++..|..+..+++|+.|++++|...+ .+|. .|
T Consensus 246 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~ 325 (680)
T 1ziw_A 246 KWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 325 (680)
T ss_dssp GGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTT
T ss_pred CcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhc
Confidence 76 9999999999999989999999999999999999999999999999999999999886653 2333 78
Q ss_pred cCCCCCceEeccCcccCCcCchhccCCccccceecccccc--ccccccccCCC--CCCCeeccccccccCcccccccCCC
Q 043316 386 GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL--FGKVYEAFGDH--PNLTFLDLSQNNLYGEISFNWRNFP 461 (1031)
Q Consensus 386 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l--~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~ 461 (1031)
..+++|++|++++|++.+..+..|.++++|++|++++|.+ ..+....|..+ ++|+.|++++|+++++.+..|..++
T Consensus 326 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~ 405 (680)
T 1ziw_A 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLG 405 (680)
T ss_dssp TTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred ccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCC
Confidence 8999999999999999999999999999999999999974 34444455443 6899999999999999999999999
Q ss_pred ccccccCcccccCCCCC-CCccCCCCCcEEEeeCCcccCCChhhhhccccCceeeccccccc--CCCcccccccCcccee
Q 043316 462 KLGTFNASMNNIYGSIP-PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS--GGVPLEFGSLTELQYL 538 (1031)
Q Consensus 462 ~L~~L~l~~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L 538 (1031)
+|+.|++++|.+.+.+| ..+..+++|++|++++|++.+..+..|..+++|+.|++++|+++ +..|..|..+++|++|
T Consensus 406 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L 485 (680)
T 1ziw_A 406 HLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTIL 485 (680)
T ss_dssp TCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEE
T ss_pred CCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEE
Confidence 99999999999987666 67899999999999999999999999999999999999999987 5788999999999999
Q ss_pred ecCcCcCCCCCcccccCCCccceecccCcccCCCCc--------hhhccccccCceeccCcccCCcCCccccCcccchhh
Q 043316 539 DLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP--------TEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEEL 610 (1031)
Q Consensus 539 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 610 (1031)
+|++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..|..+++|+.|
T Consensus 486 ~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 565 (680)
T 1ziw_A 486 DLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKII 565 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCccee
Confidence 999999998888889999999999999999986522 348899999999999999995555679999999999
Q ss_pred hcCCCccCCCCccccccCCcceEEecccccccCCCCCCC-----CcccccccCCCCccC
Q 043316 611 NLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNST-----AFKDGLMEGNKGLCG 664 (1031)
Q Consensus 611 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~-----~~~~~~~~~n~~~c~ 664 (1031)
+|++|+|+++.+..|..+++|++|++++|++++..|... ........+|++.|.
T Consensus 566 ~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 566 DLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred ECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 999999999988999999999999999999998776422 233445779999886
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-62 Score=595.41 Aligned_cols=495 Identities=19% Similarity=0.245 Sum_probs=306.9
Q ss_pred CChHhHHHHHHHHHhCcCCCCCCC-------ccCCCCCCCCCCCCCCCCcc---ceeEeCCCCCEEEEEecCCccccccC
Q 043316 24 DSTKESYALLNWKTSLQNQNPNSS-------LLSSWTLYPANATKISPCTW---FGIFCNLVGRVISISLSSLGLNGTFQ 93 (1031)
Q Consensus 24 ~~~~~~~all~~k~~~~~~~~~~~-------~~~sw~~~~~~~~~~~~C~w---~gv~c~~~~~v~~l~l~~~~l~g~~~ 93 (1031)
....|+.||.+||+++. ++.+. ...+|+ .++|||.| +||+|+..|||++|+|+++++.|++|
T Consensus 27 ~~~~d~~aL~~~~~~~~--~~~w~~~~~~~~~~~~W~------~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp 98 (636)
T 4eco_A 27 EYIKDYLALKEIWDALN--GKNWSQQGFGTQPGANWN------FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVP 98 (636)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGCCCCC------CCCC------CSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEEC
T ss_pred hHHHHHHHHHHHHHHcC--CCCcccCCcCCccCCCCC------CCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCC
Confidence 34579999999999986 33333 234787 57899999 99999888999999999999999999
Q ss_pred CccccCCCcccEEecCCCcC------cC------CCccccccCCcCcEeeCCCCcccCCCCcccccc-ccceEEEeeccc
Q 043316 94 DFSFSSFPHLMYLNLSCNVL------YG------NIPPQISNLSKLRALDLGNNQLSGVIPQEIGHL-TCLRMLYFDVNH 160 (1031)
Q Consensus 94 ~~~~~~l~~l~~L~l~~n~~------~~------~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l-~~L~~L~l~~n~ 160 (1031)
+. ++++++|++|+|++|.+ .| .+|+.. +..|+ +++++|.+.+.+|..++.+ ..+..+++....
T Consensus 99 ~~-l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~ 174 (636)
T 4eco_A 99 DA-IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKS 174 (636)
T ss_dssp GG-GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCC
T ss_pred hH-HhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccc
Confidence 75 99999999999999987 44 566655 66777 8888888888888777632 334444433221
Q ss_pred cCCCCCccccCcccCceeec--cCcccCCCCCCcccccccccEEEecccccccc-----------------cCcccc--c
Q 043316 161 LHGSIPLEIGKLSLINVLTL--CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGS-----------------IPNVMG--N 219 (1031)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L--~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~-----------------~p~~~~--~ 219 (1031)
+. ......++.+.+ .+|+++| ||+.++++++|++|+|++|+++|. +|..++ +
T Consensus 175 ~~------~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~ 247 (636)
T 4eco_A 175 IK------KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDN 247 (636)
T ss_dssp CC------CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG
T ss_pred cc------cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcc
Confidence 11 011111222222 2345554 555555555555555555555543 555555 5
Q ss_pred ccccccccccccccccccCccccccCcccEEEeecCc-CCC-CCCcccccc------ccccccccccccccccCCc--cc
Q 043316 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS-LFG-FIPSVIGNL------KSLFELDLSENQLFGSIPL--SF 289 (1031)
Q Consensus 220 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~ 289 (1031)
+++|++|+|++|++.+.+|..++++++|++|+|++|+ +++ .+|..++++ ++|++|+|++|+++ .+|. .|
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l 326 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL 326 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh
Confidence 5555555555555555555555555555555555555 555 455555544 55566666666555 5555 55
Q ss_pred ccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc-CceEEcccCCCcCccCCccCccc--c
Q 043316 290 SNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS-LRTLYLYDNGFYGLVPNEIGYLK--S 366 (1031)
Q Consensus 290 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~ 366 (1031)
+++++|++|++++|+++|.+| .++++++|++|++++|+++ .+|..++.+++ |++|++++|.++ .+|..+..+. +
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~ 403 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSV 403 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSC
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCc
Confidence 556666666666666655555 5555666666666666665 55556666666 666666666665 4455555443 6
Q ss_pred cceEEccccccCCCcccccc-------CCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCC--
Q 043316 367 LSKLELCRNHLSGVIPHSIG-------NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHP-- 437 (1031)
Q Consensus 367 L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-- 437 (1031)
|++|++++|++++.+|..+. .+++|++|++++|+++.+.+..|..+++|++|+|++|++..++...+....
T Consensus 404 L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~ 483 (636)
T 4eco_A 404 MSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENEN 483 (636)
T ss_dssp EEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEE
T ss_pred cCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccccc
Confidence 66666666666666666666 566666666666666655555566667777777777777655555554433
Q ss_pred -----CCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCcc--CCCCCcEEEeeCCcccCCChhhhhcccc
Q 043316 438 -----NLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG--DSSKLQVLDLSSNHIVGKIPVQFEKLFS 510 (1031)
Q Consensus 438 -----~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 510 (1031)
+|+.|+|++|+++.+ |..+. .+++|++|+|++|+|++ +|..+..+++
T Consensus 484 ~~~l~~L~~L~Ls~N~l~~l-------------------------p~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~ 537 (636)
T 4eco_A 484 FKNTYLLTSIDLRFNKLTKL-------------------------SDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSST 537 (636)
T ss_dssp CTTGGGCCEEECCSSCCCBC-------------------------CGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSS
T ss_pred ccccCCccEEECcCCcCCcc-------------------------ChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCC
Confidence 788888888777633 33333 45555555555555554 4555555555
Q ss_pred Cceeec------ccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccC
Q 043316 511 LNKLIL------NLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570 (1031)
Q Consensus 511 L~~L~L------~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 570 (1031)
|+.|+| ++|++.+.+|..+..+++|++|+|++|+++ .+|..+. ++|++|+|++|++.
T Consensus 538 L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 538 LKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp CCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTC
T ss_pred CCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCc
Confidence 555555 445555566666666666666666666663 4555444 45666666666554
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-59 Score=592.37 Aligned_cols=532 Identities=25% Similarity=0.234 Sum_probs=428.3
Q ss_pred EecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCC-CccccccccceEEEeeccc
Q 043316 82 SLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVI-PQEIGHLTCLRMLYFDVNH 160 (1031)
Q Consensus 82 ~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~n~ 160 (1031)
+.++.+++. +|. ..+++++|||++|.+++..|..++++++|++|||++|.+.+.+ |..|+++++|++|+|++|.
T Consensus 10 dcs~~~L~~-vP~----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 10 FYRFCNLTQ-VPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EESCCCSSC-CCS----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EccCCCCCC-CCC----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 445555553 333 3478899999999998888888999999999999998776666 6778999999999999999
Q ss_pred cCCCCCccccCcccCceeeccCcccCCCCCCc--ccccccccEEEecccccccccC-ccccccccccccccccccccccc
Q 043316 161 LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS--LGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSI 237 (1031)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~--~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 237 (1031)
+++..|..|+++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..| ..|+++++|++|+|++|++++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 98778888999999999999999998877765 8889999999999998887654 57888899999999999888888
Q ss_pred Ccccccc--CcccEEEeecCcCCCCCCcccccccc------ccccccccccccccCCcccccC---CCCCeeeeccCccC
Q 043316 238 PFSLANL--SNLGILYLYKNSLFGFIPSVIGNLKS------LFELDLSENQLFGSIPLSFSNL---SSLTLMSLFNNSLS 306 (1031)
Q Consensus 238 p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~ 306 (1031)
|..+..+ ++|+.|+|+.|.+++..|..++.+.+ |++|++++|++++.+|..+... ++++.|.++++.+.
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~ 244 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMG 244 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCB
T ss_pred HHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccc
Confidence 8888877 78888999988888888777776665 8888888888887777766543 56777777654432
Q ss_pred CCCCCCCCChhhhhhhhccccccCCCCccccccc--ccCceEEcccCCCcCccCCccCcccccceEEccccccCCCcccc
Q 043316 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL--SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS 384 (1031)
Q Consensus 307 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 384 (1031)
.. ...+.+.+..+..|..+ ++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..
T Consensus 245 ~~---------------~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 309 (844)
T 3j0a_A 245 AG---------------FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEA 309 (844)
T ss_dssp CS---------------SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTT
T ss_pred cc---------------ccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHH
Confidence 11 12233333333444443 67888888888888777777888888888888888888777778
Q ss_pred ccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccc
Q 043316 385 IGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLG 464 (1031)
Q Consensus 385 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 464 (1031)
|.++++|++|++++|++.+..+..|.++++|++|++++|++..+.+..|..+++|+.|+|++|.++++.. ++.|+
T Consensus 310 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~-----~~~L~ 384 (844)
T 3j0a_A 310 FYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF-----IPSIP 384 (844)
T ss_dssp TTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS-----CCSCS
T ss_pred hcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC-----CCCcc
Confidence 8888888888888888888878888888888888888888888888888888888888888888875433 67788
Q ss_pred cccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCC-hhhhhccccCceeecccccccCCCcc-cccccCccceeecCc
Q 043316 465 TFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI-PVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSA 542 (1031)
Q Consensus 465 ~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~ 542 (1031)
.+++++|++. .+|.. ..+++.|++++|++++.. +..+..+++|+.|+|++|++++..+. .+..+++|++|+|++
T Consensus 385 ~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~ 460 (844)
T 3j0a_A 385 DIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGE 460 (844)
T ss_dssp EEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEES
T ss_pred hhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCC
Confidence 8888888887 34443 467899999999998653 33456899999999999999965543 466789999999999
Q ss_pred CcCC-----CCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCcc
Q 043316 543 NKLS-----SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNL 617 (1031)
Q Consensus 543 N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 617 (1031)
|.++ +..+..|.++++|++|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|+|++|+|
T Consensus 461 N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l 538 (844)
T 3j0a_A 461 NMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQL 538 (844)
T ss_dssp CCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECC
T ss_pred CccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcC
Confidence 9997 44556789999999999999999999999999999999999999999977776666 8999999999999
Q ss_pred CCCCccccccCCcceEEecccccccCCCCC
Q 043316 618 FDLIPGCFEEMRSLSRIDIAYNELQGPIPN 647 (1031)
Q Consensus 618 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 647 (1031)
++..|..| .+|+.+++++|++.|..+.
T Consensus 539 ~~~~~~~~---~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 539 LAPNPDVF---VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCCCSCCC---SSCCEEEEEEECCCCSSSC
T ss_pred CCCChhHh---CCcCEEEecCCCccccccc
Confidence 99999776 4789999999999997663
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-60 Score=576.60 Aligned_cols=521 Identities=22% Similarity=0.263 Sum_probs=426.7
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 36899999999999888889999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCccc--EEEeecCcCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG--ILYLYKNSLF 258 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~--~L~L~~N~l~ 258 (1031)
++|.+++..|..++++++|++|++++|++++..++.+..+++|++|+|++|++++..|..++.+++|+ .|++++|.++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999976688899999999999999999874434455599999999999999988788899999999 8999999999
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 338 (1031)
+..|..+.. .+|++|++++|. .++..+..+.+++...+.-+.+.+. ... .+. +..+.
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~-----------~~~-----~i~---~~~~~ 249 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDM-----------DDE-----DIS---PAVFE 249 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTS-----------CCC-----CCC---GGGGG
T ss_pred ccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccc-----------ccc-----ccC---hhHhc
Confidence 887776655 689999999987 3455666777666666554433321 111 111 11222
Q ss_pred ccc--cCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccc
Q 043316 339 NLS--SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416 (1031)
Q Consensus 339 ~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 416 (1031)
.+. +|+.|++++|.+++..+..|+.+++|++|++++|+++ .+|..+.++++|++|++++|++.+..|..+..+++|+
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 328 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLT 328 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCS
T ss_pred hhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCC
Confidence 222 5677777777777766666777777777777777776 5566677777777777777777777677777777777
Q ss_pred ceeccccccc-cccccccCCCCCCCeeccccccccCcc--cccccCCCccccccCcccccCCCCCCCccCCCCCcEEEee
Q 043316 417 RLRFNQNNLF-GKVYEAFGDHPNLTFLDLSQNNLYGEI--SFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLS 493 (1031)
Q Consensus 417 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls 493 (1031)
+|++++|.+. .++...+..+++|++|++++|.+++.. ...+..+++|++|++++|.+.+..|..+..+++|++|+++
T Consensus 329 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 408 (606)
T 3t6q_A 329 HLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLA 408 (606)
T ss_dssp EEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECT
T ss_pred EEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECC
Confidence 7777777766 344455777777777777777777665 5567777788888888888877788888889999999999
Q ss_pred CCcccCCChh-hhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCC---CcccccCCCccceecccCccc
Q 043316 494 SNHIVGKIPV-QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSS---IPKSMGNLSKLHYLNLSNNQF 569 (1031)
Q Consensus 494 ~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l 569 (1031)
+|++.+..+. .|..+++|+.|++++|++++..|..|..+++|++|++++|++++. .+..+..+++|++|+|++|++
T Consensus 409 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l 488 (606)
T 3t6q_A 409 FTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL 488 (606)
T ss_dssp TCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCC
T ss_pred CCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCcc
Confidence 9999877654 488899999999999999988888999999999999999999862 336788999999999999999
Q ss_pred CCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 570 NHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 570 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
++..|..|..+++|+.|+|++|++++..|..+..++.| .|+|++|++++.+|..|..+++|+.|++++|+++|..+
T Consensus 489 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 489 SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 98889999999999999999999999999999999999 99999999999999999999999999999999998554
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-59 Score=577.51 Aligned_cols=511 Identities=19% Similarity=0.230 Sum_probs=278.4
Q ss_pred cCCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCC--Ccc------------ceeEeCCCCCEEEEEecCCc
Q 043316 22 SSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISP--CTW------------FGIFCNLVGRVISISLSSLG 87 (1031)
Q Consensus 22 ~~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~--C~w------------~gv~c~~~~~v~~l~l~~~~ 87 (1031)
+++..+|++||++||+++. +| +|+... .+...+| |.| .||+|+..+||++|+|++++
T Consensus 264 ~~~~~~d~~ALl~~k~~l~--~~------~W~~~~-~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALD--GK------NWRYYS-GTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFG 334 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTT--GG------GCCCCC-SSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTC
T ss_pred cccchHHHHHHHHHHHHcC--CC------CCCcCC-CcccccCCccccccccccccccCcCceEecCCCCEEEEECccCC
Confidence 3456789999999999996 43 786111 0112356 999 99999888999999999999
Q ss_pred cccccCCccccCCCcccEEec-CCCcCcCCCccccccC----C-----cCcE------eeC-CCCcccC-----------
Q 043316 88 LNGTFQDFSFSSFPHLMYLNL-SCNVLYGNIPPQISNL----S-----KLRA------LDL-GNNQLSG----------- 139 (1031)
Q Consensus 88 l~g~~~~~~~~~l~~l~~L~l-~~n~~~~~~p~~~~~l----~-----~L~~------L~l-~~n~l~~----------- 139 (1031)
+.|.+|+. |++|++|++|+| ++|.+.|..|...... + .++. ++. ....+++
T Consensus 335 L~G~ip~~-l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~ 413 (876)
T 4ecn_A 335 AKGRVPDA-IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPE 413 (876)
T ss_dssp CEEEECGG-GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTT
T ss_pred CCCcCchH-HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcc
Confidence 99999975 999999999999 9999988755331111 0 0000 000 0000000
Q ss_pred CCCccccccccceEEEeec--cccCCCCCccccCcccCceeeccCcccCC-----------------CCCCccc--cccc
Q 043316 140 VIPQEIGHLTCLRMLYFDV--NHLHGSIPLEIGKLSLINVLTLCHNNFSG-----------------RIPPSLG--NLSN 198 (1031)
Q Consensus 140 ~~p~~~~~l~~L~~L~l~~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~ip~~~~--~l~~ 198 (1031)
..+........++.+.+.. |+++| ||.+|+++++|++|+|++|.++| .+|+.++ ++++
T Consensus 414 ~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~ 492 (876)
T 4ecn_A 414 MKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKD 492 (876)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred ccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCC
Confidence 0010111112223333322 45554 55555555555555555555554 3666655 6666
Q ss_pred ccEEEecccccccccCcccccccccccccccccc-ccc-ccCccccccC-------cccEEEeecCcCCCCCCc--cccc
Q 043316 199 LAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQ-LRG-SIPFSLANLS-------NLGILYLYKNSLFGFIPS--VIGN 267 (1031)
Q Consensus 199 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~p~--~~~~ 267 (1031)
|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|+.|+|++|+++ .+|. .|++
T Consensus 493 L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~ 571 (876)
T 4ecn_A 493 LTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQK 571 (876)
T ss_dssp CCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTT
T ss_pred CCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhc
Confidence 6666666666666666666666666666666665 555 5555555444 5666666666655 4455 5555
Q ss_pred cccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhh-hhhhhccccccCCCCccccccccc--Cc
Q 043316 268 LKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA-LSELGLYINQLDGVIPPSIGNLSS--LR 344 (1031)
Q Consensus 268 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~--L~ 344 (1031)
+++|++|+|++|+++ .+| .|+++++|+.|+|++|+++ .+|..+.++++ |+.|++++|.++ .+|..++.++. |+
T Consensus 572 L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~ 647 (876)
T 4ecn_A 572 MVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMG 647 (876)
T ss_dssp CTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEE
T ss_pred CCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCC
Confidence 566666666666555 555 5555555556665555555 45555555555 555555555555 44554444432 55
Q ss_pred eEEcccCCCcCccCCcc---C--cccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccccee
Q 043316 345 TLYLYDNGFYGLVPNEI---G--YLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLR 419 (1031)
Q Consensus 345 ~L~L~~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 419 (1031)
.|+|++|++++.+|... + .+++|+.|+|++|+++...+..+..+++|+.|++++|++..+.+..+....
T Consensus 648 ~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~------ 721 (876)
T 4ecn_A 648 SVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKD------ 721 (876)
T ss_dssp EEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTT------
T ss_pred EEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcccc------
Confidence 55555555555443211 1 122455555555555522222233445555555555554433222221110
Q ss_pred ccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCcc--CCCCCcEEEeeCCcc
Q 043316 420 FNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG--DSSKLQVLDLSSNHI 497 (1031)
Q Consensus 420 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~--~l~~L~~L~Ls~N~l 497 (1031)
..+..+++|+.|+|++|+++. +|..+. .+++|+.|+|++|+|
T Consensus 722 -----------~~l~nl~~L~~L~Ls~N~L~~-------------------------lp~~l~~~~l~~L~~L~Ls~N~L 765 (876)
T 4ecn_A 722 -----------GNYKNTYLLTTIDLRFNKLTS-------------------------LSDDFRATTLPYLSNMDVSYNCF 765 (876)
T ss_dssp -----------SCCTTGGGCCEEECCSSCCCC-------------------------CCGGGSTTTCTTCCEEECCSSCC
T ss_pred -----------ccccccCCccEEECCCCCCcc-------------------------chHHhhhccCCCcCEEEeCCCCC
Confidence 001122367777777766653 233333 444555555555555
Q ss_pred cCCChhhhhccccCceeeccc------ccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCC
Q 043316 498 VGKIPVQFEKLFSLNKLILNL------NQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH 571 (1031)
Q Consensus 498 ~~~~p~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 571 (1031)
++ +|..+..+++|+.|+|++ |++.+.+|..|.++++|++|+|++|++ +.+|..+. ++|+.|+|++|++..
T Consensus 766 ~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 766 SS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp SS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred Cc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 43 344444555555555544 555556666666666666666666666 35555443 456666666665555
Q ss_pred CCchhhccccccCceeccCcccC
Q 043316 572 KIPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 572 ~~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
..+..|.....+..+.|++|++.
T Consensus 842 i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 842 IDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp EECGGGHHHHHTTCCEEECCTTS
T ss_pred cChHHccccccchheeecCCCcc
Confidence 44455544445555555555443
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-58 Score=579.89 Aligned_cols=517 Identities=23% Similarity=0.232 Sum_probs=377.3
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCC-ccccccCCcCcEeeCCCCcccCCCCc
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNI-PPQISNLSKLRALDLGNNQLSGVIPQ 143 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~-p~~~~~l~~L~~L~l~~n~l~~~~p~ 143 (1031)
|.|..|-+ ...+++.|||+++.+++..+ .+|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 67888887 55889999999999987554 45999999999999999887777 67899999999999999999988899
Q ss_pred cccccccceEEEeeccccCCCCCcc--ccCcccCceeeccCcccCCCCC-CcccccccccEEEecccccccccCcccccc
Q 043316 144 EIGHLTCLRMLYFDVNHLHGSIPLE--IGKLSLINVLTLCHNNFSGRIP-PSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220 (1031)
Q Consensus 144 ~~~~l~~L~~L~l~~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~ip-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 220 (1031)
.|+++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..++.+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999888876 9999999999999999997655 579999999999999999999999999988
Q ss_pred --cccccccccccccccccCccccccCc------ccEEEeecCcCCCCCCcccccc---ccccccccccccc--------
Q 043316 221 --NSLSILDLSQNQLRGSIPFSLANLSN------LGILYLYKNSLFGFIPSVIGNL---KSLFELDLSENQL-------- 281 (1031)
Q Consensus 221 --~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l-------- 281 (1031)
++|+.|+|++|.+.+..|..++.+.+ |+.|++++|.+++..|..+... .+++.|+++.+.+
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999999988887776 9999999999998888877653 5677787774433
Q ss_pred -cccCCcccccC--CCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccC
Q 043316 282 -FGSIPLSFSNL--SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP 358 (1031)
Q Consensus 282 -~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 358 (1031)
.+..+..|.++ ++|+.|++++|.+++..|..+..+++|+.|+|++|++++..|..|+.+++|++|+|++|.+++..|
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 22223334333 456666666666665555555666666666666666655555555556666666666666655555
Q ss_pred CccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCC
Q 043316 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPN 438 (1031)
Q Consensus 359 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 438 (1031)
..|..+++|+.|++++|++++..+..|.++++|++|++++|.++++. .+++|+.|++++|++..++.. ..+
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~l~~~----~~~ 402 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLVTLPKI----NLT 402 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCCCCCCC----CTT
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCccccccc----ccc
Confidence 55555666666666666655555555555555555555555555322 144455555555555433221 234
Q ss_pred CCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChh-hhhccccCceeecc
Q 043316 439 LTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV-QFEKLFSLNKLILN 517 (1031)
Q Consensus 439 L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~ 517 (1031)
++.|++++|+++++.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+|+
T Consensus 403 l~~L~ls~N~l~~l~~-----------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls 459 (844)
T 3j0a_A 403 ANLIHLSENRLENLDI-----------------------LYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLG 459 (844)
T ss_dssp CCEEECCSCCCCSSTT-----------------------HHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEE
T ss_pred cceeecccCccccCch-----------------------hhhhhcCCccceeeCCCCcccccccccccccCCccccccCC
Confidence 4455555544443221 11234566777777777777654332 34456777777777
Q ss_pred ccccc-----CCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcc
Q 043316 518 LNQLS-----GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592 (1031)
Q Consensus 518 ~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 592 (1031)
+|.++ +..+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|+|++.++..+. ++|+.|||++|+
T Consensus 460 ~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~ 537 (844)
T 3j0a_A 460 ENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQ 537 (844)
T ss_dssp SCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEEC
T ss_pred CCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCc
Confidence 77776 33445677788888888888888877777788888888888888888877776665 678888888888
Q ss_pred cCCcCCccccCcccchhhhcCCCccCCC
Q 043316 593 LQGEIPPQICNMESLEELNLSHNNLFDL 620 (1031)
Q Consensus 593 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 620 (1031)
|++.+|..|. +|+.|++++|++...
T Consensus 538 l~~~~~~~~~---~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 538 LLAPNPDVFV---SLSVLDITHNKFICE 562 (844)
T ss_dssp CCCCCSCCCS---SCCEEEEEEECCCCS
T ss_pred CCCCChhHhC---CcCEEEecCCCcccc
Confidence 8877776653 677888888888763
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-58 Score=564.14 Aligned_cols=535 Identities=21% Similarity=0.205 Sum_probs=421.0
Q ss_pred EecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeecccc
Q 043316 82 SLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161 (1031)
Q Consensus 82 ~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l 161 (1031)
+.++.+++ .+|.. + .+++++|+|++|.+++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 17 ~c~~~~l~-~ip~~-~--~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 17 QCMDQKLS-KVPDD-I--PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp ECTTSCCS-SCCTT-S--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EccCCCcc-cCCCC-C--CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 44444443 34442 2 27899999999999988888999999999999999999988889999999999999999999
Q ss_pred CCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCcc
Q 043316 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFS 240 (1031)
Q Consensus 162 ~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 240 (1031)
++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+++ .+|..|+++++|++|+|++|++++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 98889999999999999999999997777899999999999999999986 67999999999999999999999888888
Q ss_pred ccccCccc----EEEeecCcCCCCCCcccccccccccccccccccc-ccCCcccccCCCCCeeeeccCccCCCCCCCCCC
Q 043316 241 LANLSNLG----ILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF-GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN 315 (1031)
Q Consensus 241 l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 315 (1031)
++.+++|+ .|++++|.+++..+..+... +|++|++++|.++ +.+|..+.++++|+.+++..+.+.+...-.
T Consensus 173 ~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~--- 248 (606)
T 3vq2_A 173 LQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE--- 248 (606)
T ss_dssp THHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS---
T ss_pred hhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccc---
Confidence 88888776 89999999998777666655 8999999999987 466778999999999999877665321100
Q ss_pred hhhhhhhhccccccCCCCcccccccccCceEEc-ccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceE
Q 043316 316 LEALSELGLYINQLDGVIPPSIGNLSSLRTLYL-YDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLV 394 (1031)
Q Consensus 316 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 394 (1031)
.+....+..+..+ +++.+++ ..|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|
T Consensus 249 ------------~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L 312 (606)
T 3vq2_A 249 ------------IFEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSL 312 (606)
T ss_dssp ------------CCCGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEE
T ss_pred ------------ccChHHhhhhhhc-cHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEE
Confidence 0001111122222 3445555 55555555554 5556666666666666542 33 55556666666
Q ss_pred eccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcc--cccccCCCccccccCcccc
Q 043316 395 NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEI--SFNWRNFPKLGTFNASMNN 472 (1031)
Q Consensus 395 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~L~l~~N~ 472 (1031)
++++|++ +.+| .+ .+++|++|++++|...+.. .+..+++|+.|++++|++++.. ...+..++.|++|++++|.
T Consensus 313 ~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 387 (606)
T 3vq2_A 313 SIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNG 387 (606)
T ss_dssp EEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCS
T ss_pred EcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCc
Confidence 6666666 3333 33 5666666666666433222 4556666777777777666553 4555666777777777777
Q ss_pred cCCCCCCCccCCCCCcEEEeeCCcccCCCh-hhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCC-CCc
Q 043316 473 IYGSIPPEIGDSSKLQVLDLSSNHIVGKIP-VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS-SIP 550 (1031)
Q Consensus 473 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p 550 (1031)
+.+ +|..+..+++|++|++++|++.+..| ..|..+++|+.|++++|++++..|..|..+++|++|++++|++++ .+|
T Consensus 388 l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 466 (606)
T 3vq2_A 388 AII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLS 466 (606)
T ss_dssp EEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEEC
T ss_pred ccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchH
Confidence 664 55778888999999999999988777 688899999999999999998889999999999999999999987 478
Q ss_pred ccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCC-
Q 043316 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMR- 629 (1031)
Q Consensus 551 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~- 629 (1031)
..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++.+|..+..+++|++|+|++|+|+.+ |..+..++
T Consensus 467 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-p~~~~~l~~ 545 (606)
T 3vq2_A 467 NVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETS-KGILQHFPK 545 (606)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCE-ESCGGGSCT
T ss_pred HhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCccc-CHhHhhhcc
Confidence 8899999999999999999988899999999999999999999988899999999999999999999865 65588887
Q ss_pred cceEEecccccccCCCCC
Q 043316 630 SLSRIDIAYNELQGPIPN 647 (1031)
Q Consensus 630 ~L~~L~l~~N~l~~~~p~ 647 (1031)
+|+.|++++|++.|..+.
T Consensus 546 ~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 546 SLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TCCEEECCSCCCCCSSTT
T ss_pred cCcEEEccCCCcccCCcc
Confidence 599999999999986653
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-57 Score=552.61 Aligned_cols=533 Identities=23% Similarity=0.216 Sum_probs=401.1
Q ss_pred CCCCccc----eeEeCCC----------CCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcC
Q 043316 62 ISPCTWF----GIFCNLV----------GRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKL 127 (1031)
Q Consensus 62 ~~~C~w~----gv~c~~~----------~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L 127 (1031)
.+||.|. .|.|... .+++.|+|+++.+.+..+ ..|.++++|++|+|++|.+++..|..|+++++|
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 3667663 5778541 468999999999987544 459999999999999999998888899999999
Q ss_pred cEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCC-CCCCcccccccccEEEecc
Q 043316 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG-RIPPSLGNLSNLAYLYLNN 206 (1031)
Q Consensus 128 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~ip~~~~~l~~L~~L~l~~ 206 (1031)
++|+|++|.+++..|..|+++++|++|++++|++++..|..++++++|++|+|++|.+++ .+|..++++++|++|++++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999998889999999999999999999997777899999999999999999986 6899999999999999999
Q ss_pred cccccccCcccccccccc----cccccccccccccCccccccCcccEEEeecCcCC-CCCCccccccccccccccccccc
Q 043316 207 NSLFGSIPNVMGNLNSLS----ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF-GFIPSVIGNLKSLFELDLSENQL 281 (1031)
Q Consensus 207 n~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l 281 (1031)
|++++..|..|+.+++|+ +|++++|++++..+..+.. .+|+.|++++|.++ +..|..+.++++|+.+++..+.+
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~ 241 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEF 241 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcceeCcccccC-ceeeeeeccCCccchhHHHHHhcccccccccccccccc
Confidence 999988888999998876 7999999999655555554 49999999999997 45678899999999999987765
Q ss_pred cccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhc-cccccCCCCcccccccccCceEEcccCCCcCccCCc
Q 043316 282 FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGL-YINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360 (1031)
Q Consensus 282 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 360 (1031)
.+... +..+ ....+..+..+ .++.+++ ..|.+.+.+|. +..+++|+.|++++|.+... | .
T Consensus 242 ~~~~~--------l~~~-------~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~ 302 (606)
T 3vq2_A 242 KDERN--------LEIF-------EPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-D 302 (606)
T ss_dssp TTSCC--------CSCC-------CGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-C
T ss_pred ccCCc--------cccc-------ChHHhhhhhhc-cHhheeccccccccccccc-cccCCCCCEEEecCccchhh-h-h
Confidence 43211 0000 00001111111 2233333 33444444444 55555555555555555332 3 4
Q ss_pred cCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecccccccccc--ccccCCCCC
Q 043316 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV--YEAFGDHPN 438 (1031)
Q Consensus 361 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~ 438 (1031)
+..+++|++|++++|++ +.+| .+ .+++|++|++++|+..+.. .+..+++|++|++++|++.+.. +..+..+++
T Consensus 303 l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~ 377 (606)
T 3vq2_A 303 VPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS 377 (606)
T ss_dssp CCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSC
T ss_pred ccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCc
Confidence 55555555555555555 3444 23 5555555555555333222 3445555566666655555443 445555666
Q ss_pred CCeeccccccccCcccccccCCCccccccCcccccCCCCC-CCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecc
Q 043316 439 LTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIP-PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILN 517 (1031)
Q Consensus 439 L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 517 (1031)
|++|++++|.+++++ ..+..+++|++|++++|.+.+..| ..+..+++|++|++++|++.+..|..|.++++|+.|+++
T Consensus 378 L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 456 (606)
T 3vq2_A 378 LRHLDLSFNGAIIMS-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMA 456 (606)
T ss_dssp CCEEECCSCSEEEEC-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred ccEeECCCCccccch-hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECC
Confidence 666666666665544 455666666666666677766666 578888899999999999988888889999999999999
Q ss_pred cccccC-CCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCc
Q 043316 518 LNQLSG-GVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGE 596 (1031)
Q Consensus 518 ~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 596 (1031)
+|++++ .+|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++.+|..|..+++|+.|||++|+|+ .
T Consensus 457 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~ 535 (606)
T 3vq2_A 457 GNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-T 535 (606)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-C
T ss_pred CCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-c
Confidence 999987 47888999999999999999999888888999999999999999999888999999999999999999998 6
Q ss_pred CCccccCcc-cchhhhcCCCccCCCCc
Q 043316 597 IPPQICNME-SLEELNLSHNNLFDLIP 622 (1031)
Q Consensus 597 ~p~~~~~l~-~L~~L~L~~N~l~~~~~ 622 (1031)
+|..+..++ +|++|++++|++....+
T Consensus 536 ~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 536 SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 777788887 59999999999986433
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-57 Score=551.93 Aligned_cols=523 Identities=21% Similarity=0.215 Sum_probs=386.9
Q ss_pred cceeEeCCC----------CCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCc
Q 043316 67 WFGIFCNLV----------GRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQ 136 (1031)
Q Consensus 67 w~gv~c~~~----------~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 136 (1031)
+.-|.|... ..++.|+|+++.+++.. +..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQ-NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEEC-TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCC-hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 445778542 36899999999998654 4559999999999999999999889999999999999999999
Q ss_pred ccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcc
Q 043316 137 LSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV 216 (1031)
Q Consensus 137 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~ 216 (1031)
+++..|..|+++++|++|++++|++++..|..++++++|++|+|++|.+++..++.+..+++|++|++++|.+++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99888999999999999999999999766888999999999999999999744345555999999999999999888889
Q ss_pred cccccccc--cccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc-----ccCCccc
Q 043316 217 MGNLNSLS--ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF-----GSIPLSF 289 (1031)
Q Consensus 217 ~~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~ 289 (1031)
|+.+++|+ .|++++|++++..|..+.. .+|+.|++++|. .++..+..+.+++...+..+.+. ...+..|
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHh
Confidence 99999999 8999999999877766654 689999999987 34455555555443333322221 1112233
Q ss_pred ccCC--CCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCccccc
Q 043316 290 SNLS--SLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSL 367 (1031)
Q Consensus 290 ~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 367 (1031)
..+. +|+.|++++|.+++..+..|+++++|++|++++|+++ .+|..++.+++|++|++++|.+++..|..+..+++|
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 3333 6777777777777666666777777777777777777 566677777777777777777777667677777777
Q ss_pred ceEEccccccCCCccc-cccCCCCCceEeccCcccCCcC--chhccCCccccceeccccccccccccccCCCCCCCeecc
Q 043316 368 SKLELCRNHLSGVIPH-SIGNLTKLVLVNMCENHLFGLI--PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDL 444 (1031)
Q Consensus 368 ~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 444 (1031)
++|++++|.+.+.+|. .+..+++|++|++++|++.+.. +..|..+++|++|++++|++.++.+..|..+++|+.|++
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 7777777777655443 4667777777777777766654 555666666666666666666666666666666666666
Q ss_pred ccccccCcccccccCCCccccccCcccccCCCCCC-CccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccC
Q 043316 445 SQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPP-EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSG 523 (1031)
Q Consensus 445 s~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 523 (1031)
++|++++ ..+. .+..+++|++|++++|.+.+..|..|..+++|+.|++++|++++
T Consensus 408 ~~n~l~~------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 463 (606)
T 3t6q_A 408 AFTRLKV------------------------KDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPK 463 (606)
T ss_dssp TTCCEEC------------------------CTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGG
T ss_pred CCCcCCC------------------------cccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCc
Confidence 6655543 3332 35566666666666666666666666666677777777776664
Q ss_pred C---CcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcc
Q 043316 524 G---VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ 600 (1031)
Q Consensus 524 ~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 600 (1031)
. .+..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..++.| .|+|++|++++..|..
T Consensus 464 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~ 542 (606)
T 3t6q_A 464 GNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSL 542 (606)
T ss_dssp GEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGG
T ss_pred cccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhh
Confidence 2 22456677777777777777776667777777777777777777777777777777777 7777777777666666
Q ss_pred ccCcccchhhhcCCCccCCC
Q 043316 601 ICNMESLEELNLSHNNLFDL 620 (1031)
Q Consensus 601 ~~~l~~L~~L~L~~N~l~~~ 620 (1031)
+..+++|+.|++++|++...
T Consensus 543 ~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 543 LPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp HHHHHTSSEEECTTCCEECS
T ss_pred cccCCCCCEEeCCCCCcccc
Confidence 77777777777777777654
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-54 Score=521.89 Aligned_cols=467 Identities=17% Similarity=0.230 Sum_probs=390.5
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcc------cC------CCCccccccccceEEEeeccccCCCCCcc
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQL------SG------VIPQEIGHLTCLRMLYFDVNHLHGSIPLE 168 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l------~~------~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 168 (1031)
.+++.|+|++|++.|.+|+++++|++|++|||++|.+ .| .+|... +..|+ ++++.|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4789999999999999999999999999999999976 33 455554 66778 888888888888877
Q ss_pred ccC-cccCceeeccCcccCCCCCCcccccccccEEEec--ccccccccCcccccccccccccccccccccc---------
Q 043316 169 IGK-LSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN--NNSLFGSIPNVMGNLNSLSILDLSQNQLRGS--------- 236 (1031)
Q Consensus 169 ~~~-l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~--~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------- 236 (1031)
++. +..+..+++....+.. .....++.+++. .|+++| +|..|+++++|++|+|++|+++|.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 763 3445555555443331 122334444443 689998 999999999999999999999986
Q ss_pred --------cCcccc--ccCcccEEEeecCcCCCCCCcccccccccccccccccc-ccc-cCCcccccC------CCCCee
Q 043316 237 --------IPFSLA--NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ-LFG-SIPLSFSNL------SSLTLM 298 (1031)
Q Consensus 237 --------~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L 298 (1031)
+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 999999 99999999999999999999999999999999999998 998 899988887 999999
Q ss_pred eeccCccCCCCCC--CCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccc-cceEEcccc
Q 043316 299 SLFNNSLSGSIPP--TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS-LSKLELCRN 375 (1031)
Q Consensus 299 ~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N 375 (1031)
++++|+++ .+|. .++++++|++|++++|+++|.+| .++.+++|++|+|++|+++ .+|..+..+++ |++|++++|
T Consensus 311 ~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 311 YIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp ECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred ECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 99999999 8998 99999999999999999999999 9999999999999999998 77888999999 999999999
Q ss_pred ccCCCccccccCCC--CCceEeccCcccCCcCchhcc-------CCccccceeccccccccccccccCCCCCCCeecccc
Q 043316 376 HLSGVIPHSIGNLT--KLVLVNMCENHLFGLIPKSFR-------NLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446 (1031)
Q Consensus 376 ~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 446 (1031)
+++ .+|..+..++ +|++|++++|++.+..|..|. .+++|++|++++|++..++...+..+++|+.|+|++
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG 466 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC
Confidence 999 7788888765 999999999999999999998 888999999999999988888888999999999999
Q ss_pred ccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhh--ccccCceeecccccccCC
Q 043316 447 NNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE--KLFSLNKLILNLNQLSGG 524 (1031)
Q Consensus 447 N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~ 524 (1031)
|+++.++...+... +..+..+++|++|+|++|+|+ .+|..+. .+++|+.|+|++|++++
T Consensus 467 N~l~~i~~~~~~~~-----------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~- 527 (636)
T 4eco_A 467 NMLTEIPKNSLKDE-----------------NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK- 527 (636)
T ss_dssp SCCSBCCSSSSEET-----------------TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-
T ss_pred CCCCCcCHHHhccc-----------------cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-
Confidence 99885544333211 111234558999999999999 6777776 89999999999999997
Q ss_pred CcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCc
Q 043316 525 VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNM 604 (1031)
Q Consensus 525 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 604 (1031)
+|..+..+++|++|+|++|+ ++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+.
T Consensus 528 ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-- 586 (636)
T 4eco_A 528 FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-- 586 (636)
T ss_dssp CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--
T ss_pred cChhhhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--
Confidence 89999999999999997765 4556666666666666666666666766666 35565554
Q ss_pred ccchhhhcCCCccCCCC
Q 043316 605 ESLEELNLSHNNLFDLI 621 (1031)
Q Consensus 605 ~~L~~L~L~~N~l~~~~ 621 (1031)
++|+.|+|++|++..+.
T Consensus 587 ~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 587 PNISVLDIKDNPNISID 603 (636)
T ss_dssp TTCCEEECCSCTTCEEE
T ss_pred CcCCEEECcCCCCcccc
Confidence 56777777777665543
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-52 Score=506.14 Aligned_cols=512 Identities=22% Similarity=0.222 Sum_probs=383.8
Q ss_pred ccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
.+..+.++.+++ .+|..+. +++++|||++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 356788888887 7887654 5799999999999977788899999999999999999876677899999999999999
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCccccccccccccccccccccc-ccCccccccCcccEEEeecCcCCCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNSLFGFI 261 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~ 261 (1031)
|.+++..|..|+++++|++|++++|++++..+..|+++++|++|+|++|++++ .+|..++++++|++|++++|++++..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~ 165 (570)
T 2z63_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (570)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEEC
T ss_pred CcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceec
Confidence 99987777889999999999999999986555578999999999999999986 47888999999999999999998888
Q ss_pred Cccccccccc----cccccccccccccCCcccccCCCCCeeeeccCccCC-CCCCCCCChhhhhhhhccccccCC-----
Q 043316 262 PSVIGNLKSL----FELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG-SIPPTQGNLEALSELGLYINQLDG----- 331 (1031)
Q Consensus 262 p~~~~~l~~L----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~----- 331 (1031)
|..++.+++| +.|++++|.+++..|..|..+ +|+.|++++|.... .++..+.++++++.+.+..+.+..
T Consensus 166 ~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 244 (570)
T 2z63_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244 (570)
T ss_dssp GGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCE
T ss_pred HHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhh
Confidence 8888888888 788999999988777777666 78889888875432 122333344444444333222211
Q ss_pred -CCcccccccccCceEEcccCCCcCccCCccCcccccceEEcccc-ccCCCccccccCCCCCceEeccCcccCCcCchhc
Q 043316 332 -VIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN-HLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409 (1031)
Q Consensus 332 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 409 (1031)
.....+..++++ .++.+++++| .+.+..|..+..+++|+.|++++|.+.+ +|..+
T Consensus 245 ~~~~~~~~~l~~l----------------------~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~ 301 (570)
T 2z63_A 245 KFDKSALEGLCNL----------------------TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFS 301 (570)
T ss_dssp ECCTTTTGGGGGS----------------------EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCC
T ss_pred hcchhhhcccccc----------------------chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhh
Confidence 111112222111 1334444444 3444444444444455555555544443 23334
Q ss_pred cCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCC--CCCccCCCCC
Q 043316 410 RNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSI--PPEIGDSSKL 487 (1031)
Q Consensus 410 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~--p~~~~~l~~L 487 (1031)
..+ +|++|++++|.+..++. ..+++|+.|++++|.+.+.... ..+++|++|++++|.+.+.. |..+..+++|
T Consensus 302 ~~~-~L~~L~l~~n~~~~l~~---~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L 375 (570)
T 2z63_A 302 YNF-GWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSL 375 (570)
T ss_dssp SCC-CCSEEEEESCBCSSCCB---CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCC
T ss_pred ccC-CccEEeeccCcccccCc---ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCcc
Confidence 444 55555555554443332 2344555555555555443322 44555666666666555433 5567788899
Q ss_pred cEEEeeCCcccCCChhhhhccccCceeecccccccCCCc-ccccccCccceeecCcCcCCCCCcccccCCCccceecccC
Q 043316 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVP-LEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566 (1031)
Q Consensus 488 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 566 (1031)
++|++++|++.+..+. +..+++|+.|++++|++++..+ ..+..+++|++|++++|++++..|..+..+++|++|+|++
T Consensus 376 ~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 454 (570)
T 2z63_A 376 KYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 454 (570)
T ss_dssp CEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcC
Confidence 9999999999865554 8899999999999999997766 5788999999999999999988899999999999999999
Q ss_pred cccC-CCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCC
Q 043316 567 NQFN-HKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPI 645 (1031)
Q Consensus 567 N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 645 (1031)
|+++ +.+|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++.+|..|..+++|+.|++++|+++|..
T Consensus 455 n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 455 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 9997 568899999999999999999999888999999999999999999999998889999999999999999999988
Q ss_pred CCC
Q 043316 646 PNS 648 (1031)
Q Consensus 646 p~~ 648 (1031)
|..
T Consensus 535 ~~~ 537 (570)
T 2z63_A 535 PRI 537 (570)
T ss_dssp TTT
T ss_pred cch
Confidence 864
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-52 Score=499.36 Aligned_cols=490 Identities=22% Similarity=0.212 Sum_probs=318.2
Q ss_pred CCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCc
Q 043316 64 PCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQ 143 (1031)
Q Consensus 64 ~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~ 143 (1031)
.|.|.|| |+..+ ++++ .+|+. + .++|++|+|++|++++..|..++++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~~~---------~~l~-~ip~~-~--~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGRS---------RSFT-SIPSG-L--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EECTT---------SCCS-SCCSC-C--CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EECCC---------Cccc-ccccc-C--CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999999 96532 2332 34543 2 26889999999999888888899999999999999999877778
Q ss_pred cccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCC-CCCCcccccccccEEEecccccccccC-ccccccc
Q 043316 144 EIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG-RIPPSLGNLSNLAYLYLNNNSLFGSIP-NVMGNLN 221 (1031)
Q Consensus 144 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~ip~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~ 221 (1031)
.|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+| ..|++++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 88899999999999999887666678888899999999998886 467788888888888888888555555 5788888
Q ss_pred ccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccC--Cc-ccccCCCCCee
Q 043316 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI--PL-SFSNLSSLTLM 298 (1031)
Q Consensus 222 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~-~~~~l~~L~~L 298 (1031)
+|++|++++|++++.+|..++.+++|+.|+++.|.+....+..+..+++|++|++++|++++.. |. ....+++|+.|
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L 228 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKL 228 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccce
Confidence 8888888888888888888888888888888888776433333455777777788777777532 11 22345666666
Q ss_pred eeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCcc------CCccCcccccceEEc
Q 043316 299 SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV------PNEIGYLKSLSKLEL 372 (1031)
Q Consensus 299 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L 372 (1031)
++++|.+++..+. .++..+..+++|+.|++++|.+.+.. ...+..+.+|+.|++
T Consensus 229 ~l~~n~l~~~~~~--------------------~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 229 AFRGSVLTDESFN--------------------ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp EEESCEEEHHHHH--------------------HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred eccccccchhHHH--------------------HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 6666665532211 11223345566666666666665431 123455666777777
Q ss_pred cccccCCC-----ccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccc---cccCCCCCCCeecc
Q 043316 373 CRNHLSGV-----IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVY---EAFGDHPNLTFLDL 444 (1031)
Q Consensus 373 ~~N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L 444 (1031)
.++.+... ++..+....+|+.|++++|++..+....+..+++|++|++++|++.+..+ ..++.+++|+.|+|
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~L 368 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVL 368 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEEC
T ss_pred cccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEc
Confidence 77665422 12223345667777777777765444444567777777777777766543 23566777777777
Q ss_pred ccccccCccc--ccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeeccccccc
Q 043316 445 SQNNLYGEIS--FNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS 522 (1031)
Q Consensus 445 s~N~l~~~~~--~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 522 (1031)
++|+++++.. ..+..+++|++|++++|+++ .+|..+..+++|++|++++|++++
T Consensus 369 s~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~----------------------- 424 (549)
T 2z81_A 369 SQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV----------------------- 424 (549)
T ss_dssp TTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-----------------------
T ss_pred cCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-----------------------
Confidence 7777765432 23444555555555555554 344455555555555555555542
Q ss_pred CCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcccc
Q 043316 523 GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQIC 602 (1031)
Q Consensus 523 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 602 (1031)
+|..+ .++|++|+|++|++++.. ..+++|++|+|++|+|+ .+|. ...+++|+.|||++|++++.+|..+.
T Consensus 425 --l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~ 494 (549)
T 2z81_A 425 --VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFD 494 (549)
T ss_dssp --CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGG
T ss_pred --ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHh
Confidence 22211 135555666666555421 34556666666666665 2333 34456666666666666655555566
Q ss_pred CcccchhhhcCCCccCCCC
Q 043316 603 NMESLEELNLSHNNLFDLI 621 (1031)
Q Consensus 603 ~l~~L~~L~L~~N~l~~~~ 621 (1031)
.+++|+.|+|++|++.+..
T Consensus 495 ~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 495 RLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp GCTTCCEEECCSSCBCCCH
T ss_pred cCcccCEEEecCCCccCCC
Confidence 6666666666666665543
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-51 Score=497.27 Aligned_cols=489 Identities=21% Similarity=0.204 Sum_probs=362.8
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|.+++..|..++++++|++|||++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 57999999999999888889999999999999999999877888999999999999999999777789999999999999
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCcc----cEEEeecC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL----GILYLYKN 255 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L----~~L~L~~N 255 (1031)
++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..|..++.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999996555579999999999999999987 579999999999999999999998888889999999 89999999
Q ss_pred cCCCCCCccccccccccccccccccccc-cCCcccccCCCCCeeeeccCccCC------CCCCCCCChhh--hhhhhccc
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFG-SIPLSFSNLSSLTLMSLFNNSLSG------SIPPTQGNLEA--LSELGLYI 326 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~~--L~~L~L~~ 326 (1031)
.+++..|..+..+ +|++|++++|.... .+|..+.++++++.+.+..+.+.. .....+..+.+ ++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 9999888888776 89999999986542 345677788888877776543321 22233444443 45566777
Q ss_pred c-ccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcC
Q 043316 327 N-QLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI 405 (1031)
Q Consensus 327 N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 405 (1031)
+ .+.+.+|..++.+++|++|++++|.+++ +|..+..+ +|++|++++|.+. .+|. ..+++|+.|++++|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 6 7778888889999999999999999874 67778888 9999999999987 4454 47788888999888887665
Q ss_pred chhccCCccccceecccccccccc--ccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccC
Q 043316 406 PKSFRNLTSLERLRFNQNNLFGKV--YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGD 483 (1031)
Q Consensus 406 ~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~ 483 (1031)
+. ..+++|++|++++|++.+.. +..+..+++|+.|++++|.+++.... +..+
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l----------------------- 395 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGL----------------------- 395 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETC-----------------------
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-cccc-----------------------
Confidence 54 67778888888888877665 56677777788888887777654433 4444
Q ss_pred CCCCcEEEeeCCcccCCCh-hhhhccccCceeecccccccCCCcccccccCccceeecCcCcCC-CCCcccccCCCccce
Q 043316 484 SSKLQVLDLSSNHIVGKIP-VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS-SSIPKSMGNLSKLHY 561 (1031)
Q Consensus 484 l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~ 561 (1031)
++|++|++++|.+.+..+ ..+..+++|+.|++++|++++..|..|..+++|++|+|++|+++ +.+|..+..+++|++
T Consensus 396 -~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 396 -EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp -TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred -CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 445555555555544333 23444555555555555555455555555555555555555554 345555555555555
Q ss_pred ecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCc
Q 043316 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIP 622 (1031)
Q Consensus 562 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 622 (1031)
|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++++..|
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 5555555555555555555555555555555555555555555566666666666555433
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-51 Score=495.17 Aligned_cols=489 Identities=20% Similarity=0.216 Sum_probs=354.1
Q ss_pred cCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEec
Q 043316 126 KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN 205 (1031)
Q Consensus 126 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~ 205 (1031)
...+.|.++|.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 6 ~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 6 ASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp TTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 3345678888888 7777664 688888888888887777888888888888888888887777888888888888888
Q ss_pred ccccccccCccccccccccccccccccccc-ccCccccccCcccEEEeecCcCCCCC-Cccccccccccccccccccccc
Q 043316 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNSLFGFI-PSVIGNLKSLFELDLSENQLFG 283 (1031)
Q Consensus 206 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~ 283 (1031)
+|++++..|..|+++++|++|+|++|++++ ..|..++++++|++|++++|.+.+.+ +..|.++++|++|++++|++++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 888887666678888888888888888875 35677888888888888888744444 4578888888888888888887
Q ss_pred cCCcccccCCCCCeeeeccCccCCCCCCC-CCChhhhhhhhccccccCCCC--c-ccccccccCceEEcccCCCcCccCC
Q 043316 284 SIPLSFSNLSSLTLMSLFNNSLSGSIPPT-QGNLEALSELGLYINQLDGVI--P-PSIGNLSSLRTLYLYDNGFYGLVPN 359 (1031)
Q Consensus 284 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~L~~L~L~~N~l~~~~p~ 359 (1031)
.+|..+..+++|+.|++++|.+. .+|.. +..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+.
T Consensus 163 ~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 163 YQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp ECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred cChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 77888888888888888887765 23332 234566666666666666531 1 1123355666666666665543332
Q ss_pred ----ccCcccccceEEccccccCCCc------cccccCCCCCceEeccCcccCCcCchhccCCccccceecccccccccc
Q 043316 360 ----EIGYLKSLSKLELCRNHLSGVI------PHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV 429 (1031)
Q Consensus 360 ----~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 429 (1031)
.+..+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+..... +.. .
T Consensus 242 ~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~--~~~-----------------l 302 (549)
T 2z81_A 242 ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL--FYD-----------------L 302 (549)
T ss_dssp HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG--SCC-----------------C
T ss_pred HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh--ccc-----------------c
Confidence 2344555666666666554321 1122334444444444444332100 000 0
Q ss_pred ccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCC---CCccCCCCCcEEEeeCCcccCCCh--hh
Q 043316 430 YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIP---PEIGDSSKLQVLDLSSNHIVGKIP--VQ 504 (1031)
Q Consensus 430 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~ 504 (1031)
...+...++|+.|++++|+++.++...+..+++|++|++++|.+.+.+| ..++.+++|++|+|++|++++..+ ..
T Consensus 303 ~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 382 (549)
T 2z81_A 303 STVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEI 382 (549)
T ss_dssp CHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHH
T ss_pred hhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhh
Confidence 1112223456666666666665554444566666666666676665543 346788999999999999986543 56
Q ss_pred hhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccC
Q 043316 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS 584 (1031)
Q Consensus 505 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 584 (1031)
+..+++|+.|++++|+++ .+|..+..+++|++|++++|+++ .+|..+. ++|++|+|++|+|++.+ ..+++|+
T Consensus 383 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~ 454 (549)
T 2z81_A 383 LLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQ 454 (549)
T ss_dssp GGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCC
T ss_pred hhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhc
Confidence 899999999999999999 68889999999999999999998 4555443 68999999999998753 5789999
Q ss_pred ceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCCC
Q 043316 585 ELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPN 647 (1031)
Q Consensus 585 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 647 (1031)
+|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..|..+++|+.|++++|+++|..|.
T Consensus 455 ~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 455 ELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp EEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred EEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 9999999998 6775 56799999999999999999999999999999999999999987763
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-51 Score=507.62 Aligned_cols=488 Identities=17% Similarity=0.198 Sum_probs=310.8
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeC-CCCcccCCCCcccccc----c-----cceEEEe-------eccccC-
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDL-GNNQLSGVIPQEIGHL----T-----CLRMLYF-------DVNHLH- 162 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l-~~n~l~~~~p~~~~~l----~-----~L~~L~l-------~~n~l~- 162 (1031)
.+++.|+|++|++.|.+|++|++|++|++||| ++|.++|..|-.-... . .++..+. ....+.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 9999988755332111 0 0110000 000000
Q ss_pred ----------CCCCccccCcccCceeeccC--cccCCCCCCcccccccccEEEecccccccc-cCccccccccccccccc
Q 043316 163 ----------GSIPLEIGKLSLINVLTLCH--NNFSGRIPPSLGNLSNLAYLYLNNNSLFGS-IPNVMGNLNSLSILDLS 229 (1031)
Q Consensus 163 ----------~~~p~~~~~l~~L~~L~L~~--n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~L~ 229 (1031)
...+........++.+.+.. |+++| ||..|++|++|++|+|++|+++|. +|..+. .++
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~--------~~s 473 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE--------DAN 473 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS--------CTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccc--------ccc
Confidence 01121223334455555554 99998 999999999999999999999982 222111 112
Q ss_pred ccccccccCcccc--ccCcccEEEeecCcCCCCCCcccccccccccccccccc-ccc-cCCcccccCC-------CCCee
Q 043316 230 QNQLRGSIPFSLA--NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ-LFG-SIPLSFSNLS-------SLTLM 298 (1031)
Q Consensus 230 ~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L 298 (1031)
.|.++|.+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|+.|
T Consensus 474 ~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L 553 (876)
T 4ecn_A 474 SDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIF 553 (876)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEE
T ss_pred cccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEE
Confidence 2444444555444 55555555555555555555555555555555555554 444 4444443333 55555
Q ss_pred eeccCccCCCCCC--CCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccc-cceEEcccc
Q 043316 299 SLFNNSLSGSIPP--TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS-LSKLELCRN 375 (1031)
Q Consensus 299 ~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N 375 (1031)
+|++|+++ .+|. .++++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|
T Consensus 554 ~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N 629 (876)
T 4ecn_A 554 YMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHN 629 (876)
T ss_dssp ECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSS
T ss_pred EeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCC
Confidence 55555555 4444 4555555555555555555 444 4555555555555555555 44545555555 555555555
Q ss_pred ccCCCccccccCCCC--CceEeccCcccCCcCchhc---c--CCccccceeccccccccccccccCCCCCCCeecccccc
Q 043316 376 HLSGVIPHSIGNLTK--LVLVNMCENHLFGLIPKSF---R--NLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNN 448 (1031)
Q Consensus 376 ~l~~~~p~~~~~l~~--L~~L~l~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 448 (1031)
+++ .+|..+..++. |+.|++++|++.+.+|... . .+.+|+.|++++|++..++...+..+++|+.|+|++|+
T Consensus 630 ~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~ 708 (876)
T 4ecn_A 630 KLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNL 708 (876)
T ss_dssp CCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCC
T ss_pred CCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCc
Confidence 555 44444444432 5555555555555433221 1 23467778888887777766667778888888888888
Q ss_pred ccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhh--ccccCceeecccccccCCCc
Q 043316 449 LYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE--KLFSLNKLILNLNQLSGGVP 526 (1031)
Q Consensus 449 l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~ 526 (1031)
++.++...+.. .+..+.++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|
T Consensus 709 L~~ip~~~~~~-----------------~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp 769 (876)
T 4ecn_A 709 MTSIPENSLKP-----------------KDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FP 769 (876)
T ss_dssp CSCCCTTSSSC-----------------TTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CC
T ss_pred CCccChHHhcc-----------------ccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cc
Confidence 77444332211 1112334568999999999999 6788886 89999999999999996 78
Q ss_pred ccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCccc
Q 043316 527 LEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMES 606 (1031)
Q Consensus 527 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 606 (1031)
..+..+++|+.|+|++|+ ++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++
T Consensus 770 ~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~ 828 (876)
T 4ecn_A 770 TQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQ 828 (876)
T ss_dssp CGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SS
T ss_pred hhhhcCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CC
Confidence 889999999999999876 5667777777777777777777777777777 46776655 57
Q ss_pred chhhhcCCCccCCCCccccccCCcceEEeccccccc
Q 043316 607 LEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642 (1031)
Q Consensus 607 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 642 (1031)
|+.|+|++|++..+.+..|.....+..+.+.+|++.
T Consensus 829 L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 829 LYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp SCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred CCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 777888888777776666666656666677777655
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-50 Score=440.21 Aligned_cols=254 Identities=25% Similarity=0.404 Sum_probs=208.0
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|.+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC----hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 57888999999999999999753 47889999997542 234678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCC----------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA----------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1031)
..++||||+++|+|.++++... ....++|.++..|+.|||+||+|||++ +||||||||+|||++.++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999997642 234689999999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhH
Q 043316 903 EAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~ 979 (1031)
.+||+|||+|+........ .....||+.|||||++.++.++.++|||||||++|||+| |+.||...... . ..
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~---~~ 240 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--E---VI 240 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--H---HH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--H---HH
Confidence 9999999999876433221 223568999999999999999999999999999999999 89998755431 1 22
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..+........+.. ...++.+++.+||+.||++|||++||.+.|+
T Consensus 241 ~~i~~~~~~~~p~~------~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 241 ECITQGRVLQRPRT------CPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHcCCCCCCCcc------chHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22222222222211 1235778999999999999999999999886
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-50 Score=438.11 Aligned_cols=256 Identities=22% Similarity=0.318 Sum_probs=208.7
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
.+++..++||+|+||+||+|.+ .+++.||||+++... +....++|.+|+.++++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 4567788999999999999975 256899999997643 2345678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
..++||||+++|+|.+++..... ...+++.++.+|+.|||+||+|||++ +||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence 99999999999999999965321 24589999999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhh
Q 043316 900 SEHEAHVSDFGIAKFLNPHS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~ 976 (1031)
+++++||+|||+|+...... .......||++|||||++.++.++.++|||||||++|||+| |+.||...... .
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~-- 255 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--D-- 255 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--H--
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--H--
Confidence 99999999999998764322 22345678999999999999999999999999999999999 89998755431 1
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+........+ .. ....+.+++.+||+.||++|||++||++.|+.
T Consensus 256 -~~~~i~~~~~~~~p---~~---~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 256 -VVEMIRNRQVLPCP---DD---CPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp -HHHHHHTTCCCCCC---TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -HHHHHHcCCCCCCc---cc---chHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 22222222111112 11 22357789999999999999999999999973
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=440.88 Aligned_cols=254 Identities=25% Similarity=0.406 Sum_probs=203.3
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|...++||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS----ESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 56788899999999999999753 47899999997542 345678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
..++||||+++|+|.++++.... ..+++|.++..|+.|||+||+|||++ +||||||||+|||++.
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 99999999999999999976432 24589999999999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhh
Q 043316 901 EHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 901 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~ 977 (1031)
++.+||+|||+|+....... ......||+.|||||++.+..++.++|||||||++|||+| |+.||...... .
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-----~ 268 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-----E 268 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----H
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 99999999999987643322 2234678999999999999999999999999999999999 89998755431 1
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+........+.. ...++.+++.+||+.||++|||++||++.|+
T Consensus 269 ~~~~i~~g~~~~~p~~------~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 269 AIDCITQGRELERPRA------CPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp HHHHHHHTCCCCCCTT------CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCCccc------ccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 2222222222222221 1235778999999999999999999999886
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-50 Score=444.37 Aligned_cols=249 Identities=26% Similarity=0.382 Sum_probs=210.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
..|+..++||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+++.+|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG----CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4589999999999999999965 579999999997543 23456688999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++... .+++.++..++.||+.||+|||++ |||||||||+|||++.+|++||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 9999999999999753 489999999999999999999999 999999999999999999999999999998766
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.....+..+..
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i~~~~~~~~~~~---- 293 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKMIRDNLPPRLKNL---- 293 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSSCCCCSCG----
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHcCCCCCCCcc----
Confidence 55556778999999999999999999999999999999999999999865432 112222223222222221
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....++.+++.+||++||++|||++|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122346788999999999999999999975
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-50 Score=444.75 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=204.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|+. .+|+.||||++.+.... ....+.+.+|++++++++|||||++++++.+++.+|+|
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS--SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC--HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 6899999999999999999954 57999999999765432 23467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++||+|.+++.... ...+++.+++.++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 99999999999997543 23578899999999999999999999 999999999999999999999999999997653
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.....+..+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+.....+..+ ..
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-----~~~~~i~~~~~~~~~---~~- 248 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-----NLVLKIISGSFPPVS---LH- 248 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHTCCCCCC---TT-
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHHHHcCCCCCCC---cc-
Confidence 323335578999999999999999999999999999999999999998754321 112222221111111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...++.++|.+||++||++|||++|+++
T Consensus 249 --~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 249 --YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1235778999999999999999999975
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=433.65 Aligned_cols=256 Identities=24% Similarity=0.352 Sum_probs=201.0
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|.+.++||+|+||+||+|++. ..||||+++.... .....+.|.+|+.++++++|||||+++|++.+ +.+++||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 56788999999999999999874 3699999875432 23456789999999999999999999998865 5689999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... ..+++.++..|+.|||+||+|||++ +||||||||+|||+++++++||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999997543 3589999999999999999999999 9999999999999999999999999999876432
Q ss_pred C--CCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 919 S--SNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 919 ~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
. .......||+.|||||++.+ +.|+.++|||||||++|||+||+.||....... .....+.. ....+..+..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~--~~~~p~~~~~ 262 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGR--GYASPDLSKL 262 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHT--TCCCCCSTTS
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhc--CCCCCCcccc
Confidence 2 22345689999999999864 358999999999999999999999987554321 11111111 1112222211
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. +....+.+++.+||+.||++|||++||++.|+
T Consensus 263 ~~---~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 263 YK---NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CT---TSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred cc---cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 11 12236778899999999999999999998876
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-50 Score=480.98 Aligned_cols=458 Identities=21% Similarity=0.216 Sum_probs=304.1
Q ss_pred cEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccc
Q 043316 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNN 207 (1031)
Q Consensus 128 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n 207 (1031)
++||+++|+++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57899999988 6787776 78888888888888766678888888888888888888777888888888888888888
Q ss_pred ccccccCccccccccccccccccccccc-ccCccccccCcccEEEeecCcCCCCCCccccccccc--cccccccccc--c
Q 043316 208 SLFGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL--FELDLSENQL--F 282 (1031)
Q Consensus 208 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~ 282 (1031)
+++ .+|.. .+++|++|+|++|++++ .+|..++++++|++|++++|.+++ ..+..+++| ++|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 887 56665 78888888888888886 467888888888888888888875 356667777 8888888888 6
Q ss_pred ccCCcccccCC-CCCeeeeccCccCCCCCC-CCCChhhhhhhhccccc-------cCCCCcccccccccCceEEcccCCC
Q 043316 283 GSIPLSFSNLS-SLTLMSLFNNSLSGSIPP-TQGNLEALSELGLYINQ-------LDGVIPPSIGNLSSLRTLYLYDNGF 353 (1031)
Q Consensus 283 ~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~L~~N~l 353 (1031)
+..|..+..+. +...+++++|++.+.++. .+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 77777776665 344567777777665543 55667777777777776 555554 566667777777766666
Q ss_pred cCccCCccC---cccccceEEccccccCCCccccc-----cCCCCCceEeccCcccCCcCchhccCCccccceecccccc
Q 043316 354 YGLVPNEIG---YLKSLSKLELCRNHLSGVIPHSI-----GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425 (1031)
Q Consensus 354 ~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 425 (1031)
++..+..+. ..++|++|++++|++++.+|..+ +.+++|+.+++++|.+ ......+..+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~------------- 298 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEI------------- 298 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHH-------------
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcc-------------
Confidence 543222111 12356666666666665555555 4455555555555444 2111222211
Q ss_pred ccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhh
Q 043316 426 FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQF 505 (1031)
Q Consensus 426 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 505 (1031)
....+|+.|++++|.+..... +..+++|++|++++|++++..|..+
T Consensus 299 --------~~~~~L~~L~l~~n~l~~~~~--------------------------~~~l~~L~~L~Ls~n~l~~~~~~~~ 344 (520)
T 2z7x_B 299 --------FSNMNIKNFTVSGTRMVHMLC--------------------------PSKISPFLHLDFSNNLLTDTVFENC 344 (520)
T ss_dssp --------HHTCCCSEEEEESSCCCCCCC--------------------------CSSCCCCCEEECCSSCCCTTTTTTC
T ss_pred --------cccCceeEEEcCCCccccccc--------------------------hhhCCcccEEEeECCccChhhhhhh
Confidence 001345556666555432210 1234455555555555555555555
Q ss_pred hccccCceeecccccccC--CCcccccccCccceeecCcCcCCCCCcc-cccCCCccceecccCcccCCCCchhhccccc
Q 043316 506 EKLFSLNKLILNLNQLSG--GVPLEFGSLTELQYLDLSANKLSSSIPK-SMGNLSKLHYLNLSNNQFNHKIPTEFEKLIH 582 (1031)
Q Consensus 506 ~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 582 (1031)
..+++|+.|++++|++++ .+|..+..+++|++|++++|++++.+|. .+..+++|++|+|++|++++..|..+. ++
T Consensus 345 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~ 422 (520)
T 2z7x_B 345 GHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PR 422 (520)
T ss_dssp CCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TT
T ss_pred ccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--cc
Confidence 555555555555555554 3345566666666666666666653443 366666777777777777655555543 57
Q ss_pred cCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 583 LSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 583 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+++.+..|..+++|++|++++|+++|..+
T Consensus 423 L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 423 IKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 777777777777 667666677778888888888776644457778888888888888877543
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=473.71 Aligned_cols=451 Identities=21% Similarity=0.219 Sum_probs=368.6
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1031)
++||+++|+++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 58999999999 7998887 89999999999999888889999999999999999999888999999999999999999
Q ss_pred ccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCcc--cEEEeecCcC--C
Q 043316 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL--GILYLYKNSL--F 258 (1031)
Q Consensus 184 ~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~ 258 (1031)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| +.|++++|.+ +
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 78887 89999999999999997 578999999999999999999986 457778888 9999999999 8
Q ss_pred CCCCccccccc-cccccccccccccccCCc-ccccCCCCCeeeeccCc-------cCCCCCCCCCChhhhhhhhcccccc
Q 043316 259 GFIPSVIGNLK-SLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNNS-------LSGSIPPTQGNLEALSELGLYINQL 329 (1031)
Q Consensus 259 ~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~L~~N~l 329 (1031)
+..|..+..+. +...+++++|++.+.++. .+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88898888876 455678999998877665 78899999999999998 766666 788999999999999998
Q ss_pred CCCCccccc---ccccCceEEcccCCCcCccCCcc-----CcccccceEEccccccCCCcc-ccccCC---CCCceEecc
Q 043316 330 DGVIPPSIG---NLSSLRTLYLYDNGFYGLVPNEI-----GYLKSLSKLELCRNHLSGVIP-HSIGNL---TKLVLVNMC 397 (1031)
Q Consensus 330 ~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~l~ 397 (1031)
.+..+..+. .+++|++|++++|++++.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 875433322 24689999999999999999988 9999999999999999 445 555554 668888887
Q ss_pred CcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCC
Q 043316 398 ENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSI 477 (1031)
Q Consensus 398 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~ 477 (1031)
+|.+.... .+..+++|++|++++|+++ +.+
T Consensus 311 ~n~l~~~~--------------------------~~~~l~~L~~L~Ls~n~l~------------------------~~~ 340 (520)
T 2z7x_B 311 GTRMVHML--------------------------CPSKISPFLHLDFSNNLLT------------------------DTV 340 (520)
T ss_dssp SSCCCCCC--------------------------CCSSCCCCCEEECCSSCCC------------------------TTT
T ss_pred CCcccccc--------------------------chhhCCcccEEEeECCccC------------------------hhh
Confidence 77765431 0134456666666665443 344
Q ss_pred CCCccCCCCCcEEEeeCCcccC--CChhhhhccccCceeecccccccCCCcc-cccccCccceeecCcCcCCCCCccccc
Q 043316 478 PPEIGDSSKLQVLDLSSNHIVG--KIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSMG 554 (1031)
Q Consensus 478 p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 554 (1031)
|..++.+++|++|+|++|++++ .+|..+..+++|+.|++++|++++.+|. .+..+++|++|++++|++++..|..+.
T Consensus 341 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 420 (520)
T 2z7x_B 341 FENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP 420 (520)
T ss_dssp TTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC
T ss_pred hhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc
Confidence 5566667777777777777775 3456677788888888888888764554 477788888888888888777766654
Q ss_pred CCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcc-ccCcccchhhhcCCCccCCC
Q 043316 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ-ICNMESLEELNLSHNNLFDL 620 (1031)
Q Consensus 555 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~ 620 (1031)
++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+++|++|++++|++++.
T Consensus 421 --~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 421 --PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp --TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred --ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCccc
Confidence 68888888888887 56666668888888888888888 45554 88888888888888888764
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-48 Score=477.91 Aligned_cols=511 Identities=22% Similarity=0.222 Sum_probs=372.6
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|||++|+|++..|.+|.++++|++|||++|+|++..|..|++|++|++|+|++|++++..|..|+++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 37999999999999777778999999999999999999777778999999999999999999655567899999999999
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCccc----EEEeecC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG----ILYLYKN 255 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~N 255 (1031)
++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|+|++|++++..|..+..+.+++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999997666789999999999999999975 4688899999999999999999988888888776654 6889999
Q ss_pred cCCCCCCcccccccccccccccccccccc-CCcccccCCCCCeeeeccCccCC------CCCCCCCChhhhhhhhccccc
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFGS-IPLSFSNLSSLTLMSLFNNSLSG------SIPPTQGNLEALSELGLYINQ 328 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~~L~~L~L~~N~ 328 (1031)
.++...+..+. ...++.|++++|..... .+..+..+..++...+..+.... ..+..+..+..+...++..+.
T Consensus 212 ~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 99876655544 45678899998876543 34467778888877776544322 222333333344433333332
Q ss_pred cCC---CCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcC
Q 043316 329 LDG---VIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI 405 (1031)
Q Consensus 329 l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 405 (1031)
... .++..+..+.+++.+.+.+|.+.... .+....+|+.|++.+|.+. ...
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~------------------------~~~ 344 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFG------------------------QFP 344 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEES------------------------SCC
T ss_pred hcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhccccccc------------------------CcC
Confidence 221 11222334444555555555443321 2333444555555555444 332
Q ss_pred chhccCCccccceeccccccccccccccCCCCCCCeeccccccccCc--ccccccCCCccccccCcccccCCCCCCCccC
Q 043316 406 PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE--ISFNWRNFPKLGTFNASMNNIYGSIPPEIGD 483 (1031)
Q Consensus 406 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~ 483 (1031)
+. .+..|+.+++.+|.+.... .+..+++|+.|++++|.+... ....+.....|+.+++..|.+.. .+..+..
T Consensus 345 ~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~ 418 (635)
T 4g8a_A 345 TL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLG 418 (635)
T ss_dssp CC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTT
T ss_pred cc---cchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccc
Confidence 21 2333444444444433221 223445555555555555432 22233445556666666665543 3455777
Q ss_pred CCCCcEEEeeCCcccCCCh-hhhhccccCceeecccccccCCCcccccccCccceeecCcCcC-CCCCcccccCCCccce
Q 043316 484 SSKLQVLDLSSNHIVGKIP-VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL-SSSIPKSMGNLSKLHY 561 (1031)
Q Consensus 484 l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~ 561 (1031)
+++|+.++++.|......+ ..|..+.+++.++++.|++++..+..+..+++|+.|+|++|.+ .+..|..|..+++|++
T Consensus 419 l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~ 498 (635)
T 4g8a_A 419 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498 (635)
T ss_dssp CTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCE
Confidence 8888888888887765543 5677888899999999998888888888899999999998874 4457788889999999
Q ss_pred ecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccC-CcceEEeccccc
Q 043316 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEM-RSLSRIDIAYNE 640 (1031)
Q Consensus 562 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~ 640 (1031)
|+|++|+|++.+|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.|..|..+ ++|++|++++|+
T Consensus 499 L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np 578 (635)
T 4g8a_A 499 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 578 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCC
T ss_pred EECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCC
Confidence 9999999998889999999999999999999998888889999999999999999999999999887 689999999999
Q ss_pred ccCC
Q 043316 641 LQGP 644 (1031)
Q Consensus 641 l~~~ 644 (1031)
|+|.
T Consensus 579 ~~C~ 582 (635)
T 4g8a_A 579 FACT 582 (635)
T ss_dssp BCCS
T ss_pred Cccc
Confidence 9874
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-49 Score=430.65 Aligned_cols=248 Identities=21% Similarity=0.321 Sum_probs=209.2
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|+ ..+++.||||++.+..... ....+.+.+|++++++++|||||++++++++++.+|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 679999999999999999995 4679999999998755322 34577899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++||+|.++++... .+++.++..++.||+.||+|||++ +||||||||+|||++.++++||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999998643 589999999999999999999999 999999999999999999999999999998754
Q ss_pred CC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ......+... ...++..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~----~~~~p~~-- 256 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIKL----EYDFPEK-- 256 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT----CCCCCTT--
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcC----CCCCCcc--
Confidence 32 234567899999999999999999999999999999999999999865432 1222222111 1122221
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKV 1025 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 1025 (1031)
...++.++|.+||++||++|||++|+
T Consensus 257 ----~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 257 ----FFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp ----CCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred ----cCHHHHHHHHHHccCCHhHCcChHHH
Confidence 12357789999999999999999986
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-49 Score=445.31 Aligned_cols=249 Identities=26% Similarity=0.383 Sum_probs=210.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|+..++||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++|||||+++++|.+++.+|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT----CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 4699999999999999999955 579999999997543 23456688999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||||+||+|.++++.. .+++.++..++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 9999999999999753 489999999999999999999999 999999999999999999999999999998766
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+............
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i~~~~~~~~~~~~--- 371 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKMIRDNLPPRLKNLH--- 371 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSCCCCCSCTT---
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHcCCCCCCcccc---
Confidence 55566778999999999999999999999999999999999999999864432 1122222232222222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++.+++.+||+.||++|||++|+++
T Consensus 372 -~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 -KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp -SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11236778999999999999999999975
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=418.23 Aligned_cols=249 Identities=23% Similarity=0.312 Sum_probs=191.5
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||++.+....+ ....+.+.+|++++++++|||||++++++.+++..|+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 47899999999999999999965 579999999997654322 3446789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+ +|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.++++||+|||+|+...
T Consensus 91 vmEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EEeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 99999 679999987653 589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. ......+||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ......+. .. ...++..
T Consensus 164 ~~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--~~~~~~i~---~~-~~~~p~~-- 234 (275)
T 3hyh_A 164 DG-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNIS---NG-VYTLPKF-- 234 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH---HT-CCCCCTT--
T ss_pred CC-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH---cC-CCCCCCC--
Confidence 32 33456789999999999998776 5799999999999999999999865432 22222221 11 1122211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ..++.+++.+||+.||++|||++|+++
T Consensus 235 -~---s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 235 -L---SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -S---CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -C---CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1 235678999999999999999999986
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=421.98 Aligned_cols=245 Identities=22% Similarity=0.339 Sum_probs=198.3
Q ss_pred CccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----CCeeEE
Q 043316 762 GEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----AQHSFI 836 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~~~l 836 (1031)
...++||+|+||+||+|.. .+++.||||++...... ....+.|.+|++++++++|||||++++++.+ +..+|+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 5567899999999999954 57899999999765432 2346789999999999999999999999865 356899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCC-CCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDS-EHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~ 913 (1031)
||||+++|+|.++++.. ..+++..+..++.||+.||+|||++ + ||||||||+|||++. ++.+||+|||+|+
T Consensus 107 vmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999999764 3589999999999999999999998 6 999999999999984 7999999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC-CCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH-RLPT 992 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 992 (1031)
... .......+||+.|||||++.+ .|+.++||||+||++|||+||+.||....... .....+.....+ .++.
T Consensus 181 ~~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~----~~~~~i~~~~~~~~~~~ 253 (290)
T 3fpq_A 181 LKR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA----QIYRRVTSGVKPASFDK 253 (290)
T ss_dssp GCC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH----HHHHHHTTTCCCGGGGG
T ss_pred eCC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH----HHHHHHHcCCCCCCCCc
Confidence 643 234466789999999999875 69999999999999999999999986543321 111111111111 1111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++.+++.+||++||++|||++|+++
T Consensus 254 ------~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 254 ------VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11235778999999999999999999986
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=434.63 Aligned_cols=249 Identities=23% Similarity=0.302 Sum_probs=202.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.+.|+..++||+|+||+||+|+. .+|+.||||+++.... ..+|+.++++++|||||++++++.+++.+|+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35688899999999999999965 5799999999976432 1379999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~ 915 (1031)
||||++||+|.++++... .+++.++..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+.+
T Consensus 128 vmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp EECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 999999999999997643 589999999999999999999999 999999999999999998 6999999999977
Q ss_pred CCCCCC-----ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 916 NPHSSN-----WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 916 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
...... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||....... ....+....... ..+
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i~~~~~~~-~~~ 278 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--LCLKIASEPPPI-REI 278 (336)
T ss_dssp ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--CHHHHHHSCCGG-GGS
T ss_pred cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHcCCCCc-hhc
Confidence 543221 123579999999999999999999999999999999999999987544321 111111110000 111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
++ .....+.+++.+||++||++|||+.|+++.|.
T Consensus 279 ~~------~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 279 PP------SCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp CT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc------cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 11 11235778899999999999999999998764
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=425.11 Aligned_cols=249 Identities=24% Similarity=0.318 Sum_probs=198.6
Q ss_pred hccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++++..... .....+.+|++++++++|||||++++++++++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 5799999999999999999964 257899999997654322 2344688999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||++||+|.++++... .+++.++..++.||+.||+|||++ ||+||||||+|||++.+|++||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999998643 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
...........+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .... ..+... ...++..
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~---~~i~~~-~~~~p~~- 248 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETM---TMILKA-KLGMPQF- 248 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT-
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHH---HHHHcC-CCCCCCc-
Confidence 65444455667899999999999999999999999999999999999999875433 1111 122111 1122211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTM-----KKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~ 1027 (1031)
...++.+++.+||++||++|||+ +|+++
T Consensus 249 -----~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 -----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -----SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -----CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 12357789999999999999984 56653
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-48 Score=423.36 Aligned_cols=262 Identities=23% Similarity=0.307 Sum_probs=199.5
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----ee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----HS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----~~ 834 (1031)
++|...++||+|+||+||+|++ +|+.||||+++... .....+.+|+..+.+++|||||+++|++.+++ .+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 4678889999999999999987 78999999986542 11223345666677899999999999997653 57
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC-----CCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD-----CLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
|+||||+++|+|.++++.. .+++.++.+++.|+++||+|||++ +.++||||||||+|||++.++++||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999999754 489999999999999999999976 2458999999999999999999999999
Q ss_pred ccccccCCCCCC----ceeeccccCcccccccccc------CCCccccchhhhHHHHHHHhCCCCCCCcCccchh-----
Q 043316 910 GIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMM------RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS----- 974 (1031)
Q Consensus 910 g~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~----- 974 (1031)
|+|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||+.||.........
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 999876543321 2345799999999998754 4678999999999999999998876533321111
Q ss_pred -----hhhhHHHh-hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 975 -----FSNMITEI-NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 975 -----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
........ ....++.++... ...+....+.+++.+||+.||++||||+||++.|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~rp~~p~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 233 PSDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred cccchHHHHHHHHhcccCCCCCCccc-cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 11111111 112222222211 112345578899999999999999999999999863
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-48 Score=430.26 Aligned_cols=257 Identities=22% Similarity=0.349 Sum_probs=208.6
Q ss_pred HhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC-CceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~~~~~~ 830 (1031)
.++|++.+.||+|+||+||+|.+. .++.||||+++.... ....+.|.+|++++.+++| ||||+++|+|.+
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~---~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC---hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 478999999999999999999643 246899999976542 2346789999999999975 899999999966
Q ss_pred -CCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 831 -AQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 831 -~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
++.+++|||||++|+|.++++.... ...+++.++..++.|||+||+|||++ +||||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccce
Confidence 4678999999999999999975422 23489999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
|+++++.+||+|||+|+........ .....||+.|||||++.++.|+.++|||||||++|||+| |+.||.......
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~- 295 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 295 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-
Confidence 9999999999999999976543332 234678999999999999999999999999999999998 999987654321
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+.. .+........+... ..++.+++.+||+.||++|||++||++.|+
T Consensus 296 ~~~~---~i~~g~~~~~p~~~------~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 296 EFCR---RLKEGTRMRAPDYT------TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp HHHH---HHHHTCCCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHH---HHHcCCCCCCCccC------CHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1112 22222222222211 235778899999999999999999999886
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-47 Score=414.58 Aligned_cols=251 Identities=20% Similarity=0.358 Sum_probs=194.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ---- 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~---- 832 (1031)
..+|++.+.||+|+||+||+|+. .+++.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~ 80 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEK 80 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccc
Confidence 46799999999999999999965 579999999996543 2234578999999999999999999999986543
Q ss_pred --------eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 833 --------HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 833 --------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
..|+||||+++|+|.++++......+.++..++.++.||+.||+|||++ |||||||||+|||++.++.+
T Consensus 81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 4799999999999999998776555667788999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC------------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc
Q 043316 905 HVSDFGIAKFLNPHSS------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF 972 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~ 972 (1031)
||+|||+|+....... ..+..+||+.|||||++.+..|+.++||||+||++|||++ ||.....
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~-- 232 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-- 232 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH--
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH--
Confidence 9999999987654321 1234579999999999999999999999999999999996 7642211
Q ss_pred hhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 973 SSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ .....+ ....+......+++.+||++||++|||+.|+++
T Consensus 233 --~~~~~~~~---~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 --RVRTLTDV---RNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp --HHHHHHHH---HTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHH---hcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111 112222 223333445678999999999999999999986
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-47 Score=455.96 Aligned_cols=461 Identities=21% Similarity=0.235 Sum_probs=234.8
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1031)
+++|+++|+++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 34455555554 2444433 45555555555555444445555555555555555555444555555555555555555
Q ss_pred ccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCcc--cEEEeecCcC--C
Q 043316 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL--GILYLYKNSL--F 258 (1031)
Q Consensus 184 ~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~ 258 (1031)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| +.|++++|.+ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 555 44444 45555555555555553 2344555555555555555555432 23333333 5555555555 5
Q ss_pred CCCCccccccc--cccccccccccccccCCc-ccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcc
Q 043316 259 GFIPSVIGNLK--SLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335 (1031)
Q Consensus 259 ~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 335 (1031)
+..|..+..+. .| .+++++|.+.+.++. .+..+++|+.|++++|+.. +.. +.+ .+.
T Consensus 185 ~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~---------~~~----------l~~-~~~ 243 (562)
T 3a79_B 185 GGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDEN---------CQR----------LMT-FLS 243 (562)
T ss_dssp SSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTT---------HHH----------HHH-HHH
T ss_pred ccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccc---------cch----------HHH-HHH
Confidence 55555554433 22 335555555444333 3344555555555554311 000 111 112
Q ss_pred cccccccCceEEcccCCCcCcc----CCccCcccccceEEccccccCCCccccc-----cCCCCCceEeccCcccCCcCc
Q 043316 336 SIGNLSSLRTLYLYDNGFYGLV----PNEIGYLKSLSKLELCRNHLSGVIPHSI-----GNLTKLVLVNMCENHLFGLIP 406 (1031)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~~ 406 (1031)
.+..+++|+.|+++++.+.+.. +..+ ..++|++|++++|++++.+|..+ ..++.|+.++++.|.+ ....
T Consensus 244 ~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~ 321 (562)
T 3a79_B 244 ELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSK 321 (562)
T ss_dssp HHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCH
T ss_pred HHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecCh
Confidence 3444555555555555443211 1111 12356666666666655555544 3444444444444443 1111
Q ss_pred hhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCC
Q 043316 407 KSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK 486 (1031)
Q Consensus 407 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~ 486 (1031)
..+..+ ....+|+.|++++|.+..... ...+++
T Consensus 322 ~~~~~~---------------------~~~~~L~~L~l~~n~~~~~~~--------------------------~~~l~~ 354 (562)
T 3a79_B 322 EALYSV---------------------FAEMNIKMLSISDTPFIHMVC--------------------------PPSPSS 354 (562)
T ss_dssp HHHHHH---------------------HHTCCCSEEEEESSCCCCCCC--------------------------CSSCCC
T ss_pred hhhhhh---------------------hccCcceEEEccCCCcccccC--------------------------ccCCCC
Confidence 111111 001345555555555432110 123444
Q ss_pred CcEEEeeCCcccCCChhhhhccccCceeecccccccCC--CcccccccCccceeecCcCcCCCCCc-ccccCCCccceec
Q 043316 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGG--VPLEFGSLTELQYLDLSANKLSSSIP-KSMGNLSKLHYLN 563 (1031)
Q Consensus 487 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ 563 (1031)
|++|++++|++++..|..+.++++|+.|++++|++++. +|..|..+++|++|++++|++++.+| ..+..+++|++|+
T Consensus 355 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~ 434 (562)
T 3a79_B 355 FTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLN 434 (562)
T ss_dssp CCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEE
T ss_pred ceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEE
Confidence 55555555555544555555555555555555555532 23445566666666666666665233 3355666666666
Q ss_pred ccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccC
Q 043316 564 LSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 564 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+++.+..|..+++|+.|++++|+++|
T Consensus 435 l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 435 LSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp CCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCC
Confidence 666666554444433 46777777777776 566666677777777777777776544447777777777777777777
Q ss_pred CCC
Q 043316 644 PIP 646 (1031)
Q Consensus 644 ~~p 646 (1031)
..|
T Consensus 512 ~c~ 514 (562)
T 3a79_B 512 TCP 514 (562)
T ss_dssp CHH
T ss_pred Ccc
Confidence 554
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=451.09 Aligned_cols=536 Identities=25% Similarity=0.220 Sum_probs=407.6
Q ss_pred ccCCCCC-CCCCCCCCCCCccc----eeEeCCC----------CCEEEEEecCCccccccCCccccCCCcccEEecCCCc
Q 043316 48 LLSSWTL-YPANATKISPCTWF----GIFCNLV----------GRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNV 112 (1031)
Q Consensus 48 ~~~sw~~-~~~~~~~~~~C~w~----gv~c~~~----------~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~ 112 (1031)
.+++|.. .|. .-++|.|. -|.|... ..++.|||+++.+++ +++.+|.++++|++|||++|+
T Consensus 12 ~~~~~~~~~p~---~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 12 KLAAANSSIPE---SWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp ----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCC
T ss_pred hhhcccCCCCC---CCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCc
Confidence 4677752 221 12467553 4678642 258999999999985 666679999999999999999
Q ss_pred CcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCC-CCCC
Q 043316 113 LYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG-RIPP 191 (1031)
Q Consensus 113 ~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~ip~ 191 (1031)
|++..|..|.+|++|++|+|++|+|++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|.
T Consensus 88 i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~ 167 (635)
T 4g8a_A 88 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 167 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCch
Confidence 997777789999999999999999997666789999999999999999996666679999999999999999975 4688
Q ss_pred cccccccccEEEecccccccccCcccccccccc----cccccccccccccCccccccCcccEEEeecCcCCCC-CCcccc
Q 043316 192 SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLS----ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF-IPSVIG 266 (1031)
Q Consensus 192 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~ 266 (1031)
.++++++|++|++++|++++..|..|..+.+++ .++++.|.++. ++........++.+++.+|..... .+..+.
T Consensus 168 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~-i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~ 246 (635)
T 4g8a_A 168 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQ 246 (635)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE-ECTTTTTTCEEEEEEEESCCSSHHHHHHHHH
T ss_pred hhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccc-cCcccccchhhhhhhhhcccccccccchhhc
Confidence 999999999999999999988888888887765 57899999985 444444556788899999876532 344566
Q ss_pred ccccccccccccccc------cccCCcccccCCCCCeeeeccCccCC---CCCCCCCChhhhhhhhccccccCCCCcccc
Q 043316 267 NLKSLFELDLSENQL------FGSIPLSFSNLSSLTLMSLFNNSLSG---SIPPTQGNLEALSELGLYINQLDGVIPPSI 337 (1031)
Q Consensus 267 ~l~~L~~L~Ls~N~l------~~~~p~~~~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 337 (1031)
.+..++...+..+.. ....+..+..+..+...++..+.... .++..+..+.+++.+++..|.+.... .+
T Consensus 247 ~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~ 324 (635)
T 4g8a_A 247 GLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DF 324 (635)
T ss_dssp TTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GG
T ss_pred CCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--cc
Confidence 777777766654433 22334456666777777776655432 23456667788888999988887542 36
Q ss_pred cccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCC--cCchhccCCccc
Q 043316 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG--LIPKSFRNLTSL 415 (1031)
Q Consensus 338 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L 415 (1031)
.....|+.|++.+|.+.+..+ ..+..|+.+++.+|.+... .....+++|+.++++.|.+.. ..+..+..+.+|
T Consensus 325 ~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L 399 (635)
T 4g8a_A 325 SYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISL 399 (635)
T ss_dssp GSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCC
T ss_pred ccchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhh
Confidence 667899999999999976644 3567788999999987643 345578899999999998754 345566777788
Q ss_pred cceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCC
Q 043316 416 ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495 (1031)
Q Consensus 416 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N 495 (1031)
+.+++..|.+.... ..+..+++|+.+++++|+.... ..+..+..+++++.++++.|
T Consensus 400 ~~L~~~~~~~~~~~-~~~~~l~~L~~l~l~~~~~~~~-----------------------~~~~~~~~l~~l~~l~ls~n 455 (635)
T 4g8a_A 400 KYLDLSFNGVITMS-SNFLGLEQLEHLDFQHSNLKQM-----------------------SEFSVFLSLRNLIYLDISHT 455 (635)
T ss_dssp CEEECCSCSEEEEC-SCCTTCTTCCEEECTTSEEEST-----------------------TSSCTTTTCTTCCEEECTTS
T ss_pred hhhhcccccccccc-ccccccccccchhhhhcccccc-----------------------cccccccccccccccccccc
Confidence 88888877765443 3466677777777777655432 12234566777888888888
Q ss_pred cccCCChhhhhccccCceeeccccccc-CCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCc
Q 043316 496 HIVGKIPVQFEKLFSLNKLILNLNQLS-GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP 574 (1031)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 574 (1031)
.+.+..+..+..+++|+.|++++|++. +..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|
T Consensus 456 ~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~ 535 (635)
T 4g8a_A 456 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 535 (635)
T ss_dssp CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCC
T ss_pred ccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCCh
Confidence 888777777888888888888887643 4567778888888888888888888778888888888888888888888888
Q ss_pred hhhccccccCceeccCcccCCcCCccccCc-ccchhhhcCCCccCC
Q 043316 575 TEFEKLIHLSELDLSHNFLQGEIPPQICNM-ESLEELNLSHNNLFD 619 (1031)
Q Consensus 575 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~ 619 (1031)
..|..+++|+.|||++|+|++..|..+..+ ++|++|+|++|++..
T Consensus 536 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 536 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp GGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred hHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 888888888888888888888888888877 578888888888875
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=410.64 Aligned_cols=295 Identities=34% Similarity=0.528 Sum_probs=265.2
Q ss_pred CCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCCc--cceeEeCCC---CCEEEEEecCCcccc--ccCCc
Q 043316 23 SDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCT--WFGIFCNLV---GRVISISLSSLGLNG--TFQDF 95 (1031)
Q Consensus 23 ~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C~--w~gv~c~~~---~~v~~l~l~~~~l~g--~~~~~ 95 (1031)
.|.++|++||++||+++. +|. .+++|. .++|||. |.||+|+.. ++|+.|+|+++++.| .+|+.
T Consensus 2 ~c~~~~~~aL~~~k~~~~--~~~--~l~~W~------~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~ 71 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG--NPT--TLSSWL------PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSS 71 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT--CCG--GGTTCC------TTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGG
T ss_pred CCCHHHHHHHHHHHHhcC--Ccc--cccCCC------CCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChh
Confidence 699999999999999997 552 689997 5679998 999999864 799999999999998 77764
Q ss_pred cccCCCcccEEecCC-CcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCccc
Q 043316 96 SFSSFPHLMYLNLSC-NVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSL 174 (1031)
Q Consensus 96 ~~~~l~~l~~L~l~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 174 (1031)
|+++++|++|++++ |.+.+.+|..++++++|++|+|++|++++.+|..++++++|++|++++|++++.+|..++.+++
T Consensus 72 -l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 72 -LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp -GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred -HhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 89999999999995 9999999999999999999999999999899999999999999999999999999999999999
Q ss_pred CceeeccCcccCCCCCCcccccc-cccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 175 INVLTLCHNNFSGRIPPSLGNLS-NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
|++|+|++|.++|.+|..+++++ +|++|++++|++++.+|..++.++ |++|+|++|++++.+|..+..+++|+.|+|+
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 229 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECC
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECC
Confidence 99999999999999999999998 999999999999989999999887 9999999999998889899999999999999
Q ss_pred cCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccc-cCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ-LDG 331 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~ 331 (1031)
+|.+++.+|. +..+++|++|+|++|++++.+|..|..+++|++|+|++|+++|.+|.. +++++|+.|++++|+ +.|
T Consensus 230 ~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 230 KNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp SSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred CCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 9999877665 788899999999999999889999999999999999999999888876 788888888888887 554
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=441.34 Aligned_cols=453 Identities=22% Similarity=0.223 Sum_probs=312.2
Q ss_pred EEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeec
Q 043316 79 ISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDV 158 (1031)
Q Consensus 79 ~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 158 (1031)
..++++++++++ +|.. +. ++|++|+|++|.+++..|..++++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~-~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKD-LP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTT-SC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCC-CC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 678899999986 6754 32 8999999999999988888999999999999999999988899999999999999999
Q ss_pred cccCCCCCccccCcccCceeeccCcccCC-CCCCcccccccccEEEecccccccccCccccccccc--cccccccccc--
Q 043316 159 NHLHGSIPLEIGKLSLINVLTLCHNNFSG-RIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL--SILDLSQNQL-- 233 (1031)
Q Consensus 159 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l-- 233 (1031)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++. .++.+++| ++|+|++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9999 78887 89999999999999996 4578999999999999999999853 45666666 9999999999
Q ss_pred ccccCccccccC--cccEEEeecCcCCCCCCc-ccccccccccccccccc-----ccccCCcccccCCCCCeeeeccCcc
Q 043316 234 RGSIPFSLANLS--NLGILYLYKNSLFGFIPS-VIGNLKSLFELDLSENQ-----LFGSIPLSFSNLSSLTLMSLFNNSL 305 (1031)
Q Consensus 234 ~~~~p~~l~~l~--~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-----l~~~~p~~~~~l~~L~~L~L~~N~l 305 (1031)
++..|..+..++ .| .++++.|.+.+.++. .+.++++|+.|++++|+ +.+. ...+..+++|+.|++.++.+
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEE
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcC
Confidence 888999888865 34 568899998876654 56789999999999985 3322 23678889999999988876
Q ss_pred CCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCcc-----CcccccceEEccccccCCC
Q 043316 306 SGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEI-----GYLKSLSKLELCRNHLSGV 380 (1031)
Q Consensus 306 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~ 380 (1031)
++ |.+.+. +..+ ..++|++|++++|.+++.+|..+ ..++.|+.++++.|.+ .
T Consensus 262 ~~-------------------~~~~~~-~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~ 318 (562)
T 3a79_B 262 TW-------------------KCSVKL-FQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--L 318 (562)
T ss_dssp CH-------------------HHHHHH-HHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--S
T ss_pred cH-------------------HHHHHH-HHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--e
Confidence 53 222211 1111 12467777777777776666665 6666666666666666 2
Q ss_pred cc-ccccCC---CCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCccccc
Q 043316 381 IP-HSIGNL---TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN 456 (1031)
Q Consensus 381 ~p-~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 456 (1031)
+| ..+..+ .+|+.|++++|.+.... + +..+++|++|++++|+++
T Consensus 319 ~p~~~~~~~~~~~~L~~L~l~~n~~~~~~---~-----------------------~~~l~~L~~L~l~~n~l~------ 366 (562)
T 3a79_B 319 FSKEALYSVFAEMNIKMLSISDTPFIHMV---C-----------------------PPSPSSFTFLNFTQNVFT------ 366 (562)
T ss_dssp SCHHHHHHHHHTCCCSEEEEESSCCCCCC---C-----------------------CSSCCCCCEEECCSSCCC------
T ss_pred cChhhhhhhhccCcceEEEccCCCccccc---C-----------------------ccCCCCceEEECCCCccc------
Confidence 33 222222 45666666666553221 1 123445555555554433
Q ss_pred ccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCC--hhhhhccccCceeecccccccCCCc-ccccccC
Q 043316 457 WRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI--PVQFEKLFSLNKLILNLNQLSGGVP-LEFGSLT 533 (1031)
Q Consensus 457 ~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 533 (1031)
+.+|..++.+++|++|+|++|++++.. |..|.++++|+.|++++|++++.+| ..+..++
T Consensus 367 ------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~ 428 (562)
T 3a79_B 367 ------------------DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAE 428 (562)
T ss_dssp ------------------TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCT
T ss_pred ------------------cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcc
Confidence 223344444555555555555555422 3445555555666666665555233 2355566
Q ss_pred ccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcc-ccCcccchhhhc
Q 043316 534 ELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ-ICNMESLEELNL 612 (1031)
Q Consensus 534 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L 612 (1031)
+|++|++++|++++..|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|+.|+|
T Consensus 429 ~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 429 SILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp TCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEEC
T ss_pred cCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEe
Confidence 666666666666555444443 46666666666665 34444446666666666666666 34443 666666677777
Q ss_pred CCCccCCC
Q 043316 613 SHNNLFDL 620 (1031)
Q Consensus 613 ~~N~l~~~ 620 (1031)
++|++.+.
T Consensus 505 ~~N~~~c~ 512 (562)
T 3a79_B 505 HDNPWDCT 512 (562)
T ss_dssp CSCCBCCC
T ss_pred cCCCcCCC
Confidence 77766653
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=407.05 Aligned_cols=258 Identities=22% Similarity=0.296 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec------C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN------A 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------~ 831 (1031)
++|++.+.||+|+||+||+|.. .+|+.||||+++.... .....+.+.+|++++++++|||||++++++.. .
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 5799999999999999999954 6799999999976432 22346778999999999999999999998754 4
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
+.+|+||||++ |+|.+++.... .+++.++..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 67899999996 67999997653 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC----CCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh----
Q 043316 912 AKFLNPH----SSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI---- 982 (1031)
Q Consensus 912 a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~---- 982 (1031)
|+.+... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||...... .....+...
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~--~~l~~I~~~~g~p 282 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV--HQLQLIMMVLGTP 282 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH--HHHHHHHHHHCCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH--HHHHHHHHhcCCC
Confidence 9876432 2234567899999999998875 4699999999999999999999998754331 111111111
Q ss_pred ----------------hhhcCCCCCCCChhH-HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 ----------------NQNLDHRLPTPSRDV-MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ----------------~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+...+...... .....++.+++.+||+.||++|||++|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 011111111110000 011235778999999999999999999875
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=400.62 Aligned_cols=202 Identities=25% Similarity=0.314 Sum_probs=172.2
Q ss_pred HHHHHhccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeE
Q 043316 754 IIKAIDDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFC 828 (1031)
Q Consensus 754 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 828 (1031)
+.+..++|++.++||+|+||+||+|+. .+++.||||++.... ...++.+|+++++.+ +|||||++++++
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~ 89 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCF 89 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence 334457899999999999999999954 257899999986532 355688999999988 699999999999
Q ss_pred ecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEe
Q 043316 829 SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVS 907 (1031)
Q Consensus 829 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~ 907 (1031)
.+.+.+|+||||+++|+|.++++ .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+||+
T Consensus 90 ~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~ 160 (361)
T 4f9c_A 90 RKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALV 160 (361)
T ss_dssp EETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEEC
T ss_pred EECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEEC
Confidence 99999999999999999999984 378899999999999999999999 99999999999999876 799999
Q ss_pred ccccccccCCCCC----------------------------CceeeccccCcccccccccc-CCCccccchhhhHHHHHH
Q 043316 908 DFGIAKFLNPHSS----------------------------NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEV 958 (1031)
Q Consensus 908 Dfg~a~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el 958 (1031)
|||+|+....... ..+..+||+.|||||++.+. .++.++||||+||++|||
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~el 240 (361)
T 4f9c_A 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240 (361)
T ss_dssp CCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHH
Confidence 9999986543211 12345799999999999875 489999999999999999
Q ss_pred HhCCCCCCCcCc
Q 043316 959 IKGNHPRDYVST 970 (1031)
Q Consensus 959 ltG~~P~~~~~~ 970 (1031)
+||+.||....+
T Consensus 241 l~G~~Pf~~~~~ 252 (361)
T 4f9c_A 241 LSGRYPFYKASD 252 (361)
T ss_dssp HHTCSSSSCCSS
T ss_pred HHCCCCCCCCCC
Confidence 999999854443
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=414.85 Aligned_cols=424 Identities=25% Similarity=0.270 Sum_probs=224.3
Q ss_pred CCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 99 SFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
..++|++|++++|.+ |.+|++++++++|++|++++|.++|.+|.+++++++|+.+++..+.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 356777777777777 67777777777777777777777777777777777777776665542 456788
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
++++|++++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++ +|... ++|++|++++|+++
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~~---~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDLP---PLLEYLGVSNNQLE 144 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSCC---TTCCEEECCSSCCS
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCCC---CCCCEEECcCCCCC
Confidence 888888874 5552 3678888888888875 6653 3678888888888874 33221 57888888888887
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 338 (1031)
+ +| .|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++++|++++ +|...
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~- 214 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP- 214 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-
Confidence 6 55 47778888888888888774 55433 477777777777775 44 46777777777777777765 34322
Q ss_pred ccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccce
Q 043316 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418 (1031)
Q Consensus 339 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 418 (1031)
++|++|++++|.++ .+| .++.+++|++|++++|++++ +|.. +++|++|++++|++.++ |.. +++|++|
T Consensus 215 --~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l-~~~---~~~L~~L 282 (454)
T 1jl5_A 215 --LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDL-PEL---PQSLTFL 282 (454)
T ss_dssp --TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCC-CCC---CTTCCEE
T ss_pred --CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCccccc-Ccc---cCcCCEE
Confidence 46677777777766 344 36667777777777777664 2322 35666666666666553 211 2455555
Q ss_pred eccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCC-CCCcEEEeeCCcc
Q 043316 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHI 497 (1031)
Q Consensus 419 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l-~~L~~L~Ls~N~l 497 (1031)
++++|++.++.. ..++|+.|++++|+++++ ..+ ++|++|++++|++
T Consensus 283 ~ls~N~l~~l~~----~~~~L~~L~l~~N~l~~i-----------------------------~~~~~~L~~L~Ls~N~l 329 (454)
T 1jl5_A 283 DVSENIFSGLSE----LPPNLYYLNASSNEIRSL-----------------------------CDLPPSLEELNVSNNKL 329 (454)
T ss_dssp ECCSSCCSEESC----CCTTCCEEECCSSCCSEE-----------------------------CCCCTTCCEEECCSSCC
T ss_pred ECcCCccCcccC----cCCcCCEEECcCCcCCcc-----------------------------cCCcCcCCEEECCCCcc
Confidence 555555544221 013445555555444321 112 4677777777777
Q ss_pred cCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCC--CCcccccCCCccceecccCcccCCCCch
Q 043316 498 VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS--SIPKSMGNLSKLHYLNLSNNQFNHKIPT 575 (1031)
Q Consensus 498 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 575 (1031)
++ +|.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|..+.. |+.|++.+.+|.
T Consensus 330 ~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~ 393 (454)
T 1jl5_A 330 IE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPE 393 (454)
T ss_dssp SC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------
T ss_pred cc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccccccccc
Confidence 75 4433 467777888888777 4554 36778888888888876 45554432 334666666665
Q ss_pred hhccccccCceeccCcccCC--cCCccccCcccchhhhcCCCccCCCCccccc
Q 043316 576 EFEKLIHLSELDLSHNFLQG--EIPPQICNMESLEELNLSHNNLFDLIPGCFE 626 (1031)
Q Consensus 576 ~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 626 (1031)
. +++|+.||+++|++++ .+|. +|+.|.+.+|.+.+..+....
T Consensus 394 ~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~~~~ 437 (454)
T 1jl5_A 394 L---PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPYEFAHE 437 (454)
T ss_dssp -----------------------------------------------------
T ss_pred c---cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCccccCHH
Confidence 3 4788999999999986 4553 466777888888876554443
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=410.05 Aligned_cols=420 Identities=24% Similarity=0.246 Sum_probs=213.8
Q ss_pred ccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccc
Q 043316 147 HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSIL 226 (1031)
Q Consensus 147 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 226 (1031)
+.++|++|++++|.+ |.+|.+|+++++|++|++++|.++|.+|.+++++++|+.+++.+|.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 457788888888888 67888888888888888888888888888888888777776666542 457778
Q ss_pred cccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 227 DLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 227 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
++++|++++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|+++
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLE 144 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCS
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCC
Confidence 888888774 4542 2577888888888877 4543 3678888888888774 3321 157888888888887
Q ss_pred CCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCcccccc
Q 043316 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG 386 (1031)
Q Consensus 307 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 386 (1031)
+ +| .++++++|++|++++|++++ +|..+ ++|++|++++|++++ +| .++.+++|++|++++|++++ +|...
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~- 214 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP- 214 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-
Confidence 5 66 57778888888888888775 45443 477788888887776 34 57777788888888887775 33322
Q ss_pred CCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccc
Q 043316 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTF 466 (1031)
Q Consensus 387 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L 466 (1031)
++|++|++++|++..+ | .|..+++|++|++++|++.+++. ..++|+.|++++|++++++.. .++|++|
T Consensus 215 --~~L~~L~l~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~l~~~----~~~L~~L 282 (454)
T 1jl5_A 215 --LSLESIVAGNNILEEL-P-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTDLPEL----PQSLTFL 282 (454)
T ss_dssp --TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSCCCCC----CTTCCEE
T ss_pred --CcccEEECcCCcCCcc-c-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccccCcc----cCcCCEE
Confidence 4677777777777643 3 36677777777777777665432 235677777777666654321 2455555
Q ss_pred cCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhcc-ccCceeecccccccCCCcccccccCccceeecCcCcC
Q 043316 467 NASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKL-FSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545 (1031)
Q Consensus 467 ~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 545 (1031)
++++|.+.+. |. -.++|++|++++|++++. ..+ ++|+.|++++|++++ +|.. +++|++|++++|++
T Consensus 283 ~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l 349 (454)
T 1jl5_A 283 DVSENIFSGL-SE---LPPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHL 349 (454)
T ss_dssp ECCSSCCSEE-SC---CCTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred ECcCCccCcc-cC---cCCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcc
Confidence 5555555431 11 013455555555555431 111 245555555555553 3322 34455555555555
Q ss_pred CCCCcccccCCCccceecccCcccCC--CCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCC--CC
Q 043316 546 SSSIPKSMGNLSKLHYLNLSNNQFNH--KIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFD--LI 621 (1031)
Q Consensus 546 ~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~ 621 (1031)
+ .+|. .+++|++|++++|++++ .+|..+.. |+.|.+.+.+|.. +++|+.|++++|++++ .+
T Consensus 350 ~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~i 414 (454)
T 1jl5_A 350 A-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDI 414 (454)
T ss_dssp S-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------------------------------
T ss_pred c-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccc
Confidence 4 2333 23455555555555544 33333322 2233444444432 2566677777777665 22
Q ss_pred ccccccCCcceEEecccccccCCCC
Q 043316 622 PGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 622 ~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|. +++.|.+.+|.+.+++|
T Consensus 415 P~------sl~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 415 PE------SVEDLRMNSERVVDPYE 433 (454)
T ss_dssp -------------------------
T ss_pred hh------hHhheeCcCcccCCccc
Confidence 32 34555566666666554
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-43 Score=410.83 Aligned_cols=387 Identities=24% Similarity=0.274 Sum_probs=301.3
Q ss_pred CCCCccce--eEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccC
Q 043316 62 ISPCTWFG--IFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSG 139 (1031)
Q Consensus 62 ~~~C~w~g--v~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~ 139 (1031)
.+.|.|.| |.|+..+ + ..+|. + .++|++|+|++|.+++..|..++++++|++|+|++|.+.+
T Consensus 5 ~~~c~~~~~~~~c~~~~-----------l-~~lp~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~ 68 (455)
T 3v47_A 5 TSECSVIGYNAICINRG-----------L-HQVPE--L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGL 68 (455)
T ss_dssp --CCEEETTEEECCSSC-----------C-SSCCC--C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTC
T ss_pred cceeEEEccccCcCCCC-----------c-ccCCC--C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccc
Confidence 35677766 7886532 1 12333 1 2689999999999998889999999999999999999987
Q ss_pred CC-CccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCc--ccccccccEEEecccccccccCcc
Q 043316 140 VI-PQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS--LGNLSNLAYLYLNNNSLFGSIPNV 216 (1031)
Q Consensus 140 ~~-p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~--~~~l~~L~~L~l~~n~l~~~~p~~ 216 (1031)
.+ |..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++.+|.. ++++++|++|+|++|++++..|..
T Consensus 69 ~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 148 (455)
T 3v47_A 69 VIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS 148 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG
T ss_pred eECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc
Confidence 76 567999999999999999999888999999999999999999999866655 999999999999999999877876
Q ss_pred -cccccccccccccccccccccCcccccc--CcccEEEeecCcCCCCCCccc--------cccccccccccccccccccC
Q 043316 217 -MGNLNSLSILDLSQNQLRGSIPFSLANL--SNLGILYLYKNSLFGFIPSVI--------GNLKSLFELDLSENQLFGSI 285 (1031)
Q Consensus 217 -~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~Ls~N~l~~~~ 285 (1031)
++++++|++|+|++|++++..|..+..+ .+|+.|++++|.+++..+..+ ..+++|++|++++|++++..
T Consensus 149 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~ 228 (455)
T 3v47_A 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESM 228 (455)
T ss_dssp GGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHH
T ss_pred ccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccc
Confidence 8999999999999999998889888877 789999999999988765543 36789999999999999888
Q ss_pred CcccccC---CCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccc--ccCceEEcccCCCcCccCCc
Q 043316 286 PLSFSNL---SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL--SSLRTLYLYDNGFYGLVPNE 360 (1031)
Q Consensus 286 p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~ 360 (1031)
|..+... ++|+.|++++|.+.+... ..+.+.+..+..+..+ ++|++|++++|.+++..|..
T Consensus 229 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 294 (455)
T 3v47_A 229 AKRFFDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSV 294 (455)
T ss_dssp HHHHHHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTT
T ss_pred hhhhhccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhh
Confidence 8877655 889999999988764321 1222332223333332 57788888888887777777
Q ss_pred cCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCC
Q 043316 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440 (1031)
Q Consensus 361 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 440 (1031)
++.+++|++|++++|++++..|..|.++++|++|++++|++.+..+..|.++++|++|++++|++.++.+..|..+++|+
T Consensus 295 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 374 (455)
T 3v47_A 295 FSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLK 374 (455)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred cccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccccccc
Confidence 77778888888888887777777777777777777777777777777777777777777777777666666666666666
Q ss_pred eeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCCh
Q 043316 441 FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502 (1031)
Q Consensus 441 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 502 (1031)
+|+|++|+++ +..+..+..+++|++|++++|++++..|
T Consensus 375 ~L~L~~N~l~------------------------~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 375 ELALDTNQLK------------------------SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EEECCSSCCS------------------------CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EEECCCCccc------------------------cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 6666665554 3344456677788888888888877665
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=413.42 Aligned_cols=252 Identities=19% Similarity=0.249 Sum_probs=202.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHH---HHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLN---EVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~---Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.++||+|+||+||+|+. .+|+.||||++.+...... .....+.+ ++.+++.++|||||+++++|++.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~-~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-TCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchh-hhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 47899999999999999999954 5799999999977554322 22333334 4667778899999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
+|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ |||||||||+|||++.+|++||+|||+|+
T Consensus 267 lylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999998643 589999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.+... .....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||........ ......+ ......++.
T Consensus 341 ~~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~i-~~~~~~~p~ 415 (689)
T 3v5w_A 341 DFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMT-LTMAVELPD 415 (689)
T ss_dssp ECSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHHH-HHCCCCCCT
T ss_pred ecCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhh-cCCCCCCCc
Confidence 77543 2345789999999999964 5799999999999999999999999865433211 1111111 111222222
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
. ...++.++|.+||++||.+|++ ++||++
T Consensus 416 ~------~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 416 S------FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp T------SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred c------CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1 1235778999999999999998 677753
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=414.65 Aligned_cols=252 Identities=20% Similarity=0.343 Sum_probs=208.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ..+.+.+.+|+++++.++|||||++++++.+++.+|+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 36899999999999999999954 579999999986643 2346778999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC--CceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE--HEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~ 914 (1031)
||||++||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.+ +.+||+|||+|+.
T Consensus 232 v~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EEECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EEeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 999999999999986542 3588999999999999999999999 99999999999999854 8999999999998
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
+.+. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ... ..+... ...++ .
T Consensus 307 ~~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--~~~---~~i~~~-~~~~~--~ 377 (573)
T 3uto_A 307 LDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETL---RNVKSC-DWNMD--D 377 (573)
T ss_dssp CCTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHH---HHHHTT-CCCCC--S
T ss_pred ccCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHH---HHHHhC-CCCCC--c
Confidence 7543 3445678999999999999999999999999999999999999998754431 111 111111 11111 1
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+.++|.+||+.||.+|||+.|+++
T Consensus 378 ~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 378 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111112235778999999999999999999986
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-42 Score=402.05 Aligned_cols=389 Identities=23% Similarity=0.210 Sum_probs=226.7
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCC-ccccCcccCceeeccC
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIP-LEIGKLSLINVLTLCH 182 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~ 182 (1031)
+.++.++++++ .+|. + .++|++|||++|.+++..|..|+++++|++|++++|.+.+.+| ..|+++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45677777776 6665 3 2678888888888877667778888888888888877766654 4577777777777777
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcc--cccccccccccccccccccccCcc-ccccCcccEEEeecCcCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV--MGNLNSLSILDLSQNQLRGSIPFS-LANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~ 259 (1031)
|.+++..|..|+++++|++|+|++|++++.+|.. |+++++|++|+|++|++++..|.. +.++++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 7777666777777777777777777776644443 666666666666666666555554 5666666666666666666
Q ss_pred CCCcccccc--ccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccc
Q 043316 260 FIPSVIGNL--KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI 337 (1031)
Q Consensus 260 ~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 337 (1031)
..|..+..+ .+|+.|++++|.+.+..+..++. .....+..+++|++|++++|++.+.+|..+
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhh
Confidence 555555544 44555555555544322211110 000011223334444444444444444433
Q ss_pred ccc---ccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccC--CCCCceEeccCcccCCcCchhccCC
Q 043316 338 GNL---SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGN--LTKLVLVNMCENHLFGLIPKSFRNL 412 (1031)
Q Consensus 338 ~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~l~~N~l~~~~~~~~~~l 412 (1031)
..+ ++|+.|++++|.+.+... ..+.+.+..+..+.. .++|+.|++++|++.+..|..|..+
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred hccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 332 445555555554432210 111111111112221 1345555555555554444445455
Q ss_pred ccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEe
Q 043316 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDL 492 (1031)
Q Consensus 413 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L 492 (1031)
++|++|++++|++.++.+..|..+++|++|+|++| .+.+..|..|..+++|++|+|
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N------------------------~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN------------------------FLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS------------------------CCCEECGGGGTTCTTCCEEEC
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCC------------------------ccCCcChhHhcCcccCCEEEC
Confidence 55555555555444444444444445555555544 444444555666677777777
Q ss_pred eCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCc
Q 043316 493 SSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550 (1031)
Q Consensus 493 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 550 (1031)
++|++++..|..|..+++|++|++++|++++..+..|..+++|++|++++|++++..|
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 7777776667777777777777777777776666667777888888888888776554
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=378.43 Aligned_cols=281 Identities=32% Similarity=0.558 Sum_probs=225.5
Q ss_pred CccccHHHHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeee
Q 043316 746 NGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825 (1031)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~ 825 (1031)
...+.+.++....++|++.+.||+|+||.||+|+..+++.||||++...... .....+.+|++++++++||||++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccceE
Confidence 3467888999999999999999999999999998888999999999765421 2233688999999999999999999
Q ss_pred eeEecCCeeEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 826 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
+++.+.+..++||||+++|+|.++++... ....+++..+..++.|++.||+|||+.+.+||+||||||+||+++.++.+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 99999999999999999999999998654 23458999999999999999999999877799999999999999999999
Q ss_pred EEeccccccccCCCCCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 905 HVSDFGIAKFLNPHSSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||+|||++......... .....||+.|+|||++.+..++.++||||+||++|||++|+.||+.................
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 99999999876543332 33456899999999998888999999999999999999999998632211110001111111
Q ss_pred ---------hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 984 ---------QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 984 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...+..... ....+....+.+++.+||+.||++|||++||++.|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 111111111 1223455678999999999999999999999999974
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=375.78 Aligned_cols=256 Identities=30% Similarity=0.446 Sum_probs=202.8
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||+||+|+. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 46899999999999999999977 788999999876542 223467889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
|||+++|+|.+++........+++..++.++.|++.||+|||+. | |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999999998765445689999999999999999999999 8 999999999999999999999999999865
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh-hhcCCCCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN-QNLDHRLPTPS 994 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 994 (1031)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....... .......+..
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~~~~~~~~~~~~~~~~~- 263 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QVVAAVGFKCKRLEIPRN- 263 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHHHHHHHSCCCCCCCTT-
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhcCCCCCCCcc-
Confidence 54433345677999999999999999999999999999999999999998754431 1111111 1111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 264 -----~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 264 -----LNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp -----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1235778999999999999999999999886
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-41 Score=370.30 Aligned_cols=249 Identities=26% Similarity=0.398 Sum_probs=208.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc----ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 6799999999999999999964 679999999986543 23467789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999999754 378899999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..........+.... +.
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~-~~-- 240 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-----ALYLIATNGTPELQN-PE-- 240 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHHCSCCCSC-GG--
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhCCCCCCCC-cc--
Confidence 5555566789999999999999999999999999999999999999986543311 111111111111111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.||++|||++|+++
T Consensus 241 -~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 241 -KLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -ccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 12235778999999999999999999975
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=367.41 Aligned_cols=253 Identities=26% Similarity=0.440 Sum_probs=208.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||+||+|.. .+++.||+|++... +....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 6789999999999999999965 57999999988553 234567899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999998643 3589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCC--------------ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH-h
Q 043316 918 HSSN--------------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE-I 982 (1031)
Q Consensus 918 ~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~-~ 982 (1031)
.... .....||+.|+|||++.+..++.++||||+|+++|||++|..||................ .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 240 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc
Confidence 3221 114578999999999999999999999999999999999999976544432222222211 1
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+...+ ..+.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~~~~~~~----------~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 241 DRYCPPNCP----------PSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHTCCTTCC----------TTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCCCC----------HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111222222 24678899999999999999999999886
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-40 Score=367.91 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=215.3
Q ss_pred ccccHHHHHHHHhc----------cCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhc
Q 043316 747 GKFLYEEIIKAIDD----------FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815 (1031)
Q Consensus 747 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~ 815 (1031)
+.+.++++..+++. |...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc----hhHHHHHHHHHHHHHh
Confidence 45778888877754 777889999999999999765 79999999986543 2356778999999999
Q ss_pred CCCCceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCC
Q 043316 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKN 895 (1031)
Q Consensus 816 l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 895 (1031)
++||||+++++++...+..++||||+++++|.+++... .+++.++..++.|++.||+|||+. ||+||||||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 99999999999999999999999999999999998753 489999999999999999999999 99999999999
Q ss_pred eeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhh
Q 043316 896 VLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF 975 (1031)
Q Consensus 896 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~ 975 (1031)
|+++.++.+||+|||++..............||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---- 247 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---- 247 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 9999999999999999987765444455678999999999999989999999999999999999999998644321
Q ss_pred hhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 976 SNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.....+..... ......+.+++.+||+.||++|||++|+++
T Consensus 248 -~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 248 -QAMKRLRDSPPPKLKNS----HKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -HHHHHHHHSSCCCCTTG----GGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHHHHhcCCCCCcCcc----ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11222222222222111 112235778999999999999999999986
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=369.26 Aligned_cols=269 Identities=30% Similarity=0.476 Sum_probs=217.2
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++....++|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES----SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3445668899999999999999999998889999999986542 234678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999976532 23589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-hhh-hHHH-----h
Q 043316 912 AKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-FSN-MITE-----I 982 (1031)
Q Consensus 912 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-~~~-~~~~-----~ 982 (1031)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ... .... .
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 986543221 233456899999999999889999999999999999999999998654332111 110 0000 0
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....++..... ...+....+.+++.+||+.||++|||++|+++.|+
T Consensus 266 ~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 266 EQIVDPNLADK--IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CSSSSSSCTTC--SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcChhhccc--cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111221111 12345567889999999999999999999999986
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=367.40 Aligned_cols=251 Identities=23% Similarity=0.293 Sum_probs=208.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+. .+++.||+|++++.... .....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 46899999999999999999965 47999999999765432 23456788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++...
T Consensus 83 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 999999999999997643 588999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..... .+.. ....++..
T Consensus 157 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~---~i~~-~~~~~p~~--- 227 (337)
T 1o6l_A 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFE---LILM-EEIRFPRT--- 227 (337)
T ss_dssp CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHHH-CCCCCCTT---
T ss_pred cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHH---HHHc-CCCCCCCC---
Confidence 444445667899999999999998999999999999999999999999864332 11111 1111 11122211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||++|| +++|+++
T Consensus 228 ---~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 228 ---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 123577889999999999999 8999875
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=374.01 Aligned_cols=256 Identities=23% Similarity=0.386 Sum_probs=208.9
Q ss_pred hccCccceeecCCCccEEEEEe--------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
++|.+.+.||+|+||.||+|+. .++..||||+++... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 6799999999999999999964 245689999997643 233567899999999999 8999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+.+..|+||||+++|+|.+++..... ...+++.++..++.||+.||+|||++ ||+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 99999999999999999999976432 23578999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-- 312 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 312 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 999999999999999987654322 2233456789999999999899999999999999999999 99998754331
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
. ....+........+.. ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 313 ~---~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 313 E---LFKLLKEGHRMDKPAN------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp G---HHHHHHTTCCCCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred H---HHHHHhcCCCCCCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1 1122222222222211 12357788999999999999999999999863
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=368.80 Aligned_cols=249 Identities=23% Similarity=0.369 Sum_probs=206.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 46799999999999999999965 6899999999976542 23356778999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999997643 488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCC-ccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRAT-EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. .......||+.|+|||++.+..+. .++||||+||++|||++|+.||+.... .... ..+... ....+..
T Consensus 166 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~---~~i~~~-~~~~p~~-- 236 (328)
T 3fe3_A 166 VG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELR---ERVLRG-KYRIPFY-- 236 (328)
T ss_dssp SS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT--
T ss_pred CC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHH---HHHHhC-CCCCCCC--
Confidence 43 334566799999999999887764 899999999999999999999875432 1111 111111 1112211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||.+|||++|+++
T Consensus 237 ----~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 237 ----MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ----SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1235678899999999999999999975
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=360.80 Aligned_cols=277 Identities=29% Similarity=0.476 Sum_probs=224.3
Q ss_pred ccccHHHHHHHHhccCcc------ceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc
Q 043316 747 GKFLYEEIIKAIDDFGEK------YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820 (1031)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n 820 (1031)
..+.+.++..++.+|... +.||+|+||.||+|.. +++.||||++............+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 467889999999998877 8999999999999987 788999999876443333345678999999999999999
Q ss_pred eeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC
Q 043316 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 821 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
|+++++++.+.+..++||||+++++|.+++........+++..++.++.|++.||+|||+. ||+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997655455689999999999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch--hhh
Q 043316 901 EHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS--SFS 976 (1031)
Q Consensus 901 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~--~~~ 976 (1031)
++.+||+|||++......... .....|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||+....... .+.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543221 234568999999998875 588999999999999999999999875543211 111
Q ss_pred hhHH----HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMIT----EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.... ......+....... ......+.+++.+||+.||.+|||++|+++.|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSCCC---HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhccccccccc---hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 1111 11122223332222 2344578899999999999999999999999873
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=378.77 Aligned_cols=188 Identities=20% Similarity=0.226 Sum_probs=91.2
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
++++++|++|++++|.+++ +| .++.+++|++|+|++|++++. | ++.+++|++|++++|++++ +| ++++++|+
T Consensus 38 ~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~ 109 (457)
T 3bz5_A 38 EEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLT 109 (457)
T ss_dssp HHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCC
T ss_pred hhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCC
Confidence 4455555555555555553 23 455555555555555555532 2 5555555555555555553 22 45555555
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|++++ +| ++++++|++|++++|++++ +| ++++++|++|++++|+..+.+ .++.+++|+.|++++|+
T Consensus 110 ~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~ 181 (457)
T 3bz5_A 110 YLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNK 181 (457)
T ss_dssp EEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCc
Confidence 55555555553 33 4555555555555555543 22 444555555555555333333 24444444444444444
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
+++. | ++.+++|++|++++|++++. .++.+++|+.|++++|+++
T Consensus 182 l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~ 225 (457)
T 3bz5_A 182 ITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT 225 (457)
T ss_dssp CCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCS
T ss_pred ccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccc
Confidence 4442 2 44444444444444444432 1344444444444444444
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-40 Score=369.22 Aligned_cols=254 Identities=21% Similarity=0.278 Sum_probs=207.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
++|.+.+.||+|+||.||+|.. .+|+.||||++++...... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 6799999999999999999965 4799999999976543221 124678999999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~ 911 (1031)
+||||+++|+|.+++.... .+++.++..++.||+.||+|||+. ||+||||||+||+++.++ .+||+|||+
T Consensus 92 lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 92 LILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999997643 588999999999999999999999 999999999999998877 799999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||...... ... ..+.. ....
T Consensus 166 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--~~~---~~i~~---~~~~ 236 (361)
T 2yab_A 166 AHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETL---ANITA---VSYD 236 (361)
T ss_dssp CEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHH---HHHHT---TCCC
T ss_pred ceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HHH---HHHHh---cCCC
Confidence 9876543 2345567999999999999989999999999999999999999998654321 111 11111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............+.++|.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111122346788999999999999999999975
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=367.57 Aligned_cols=262 Identities=26% Similarity=0.354 Sum_probs=204.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----ee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----HS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----~~ 834 (1031)
++|++.++||+|+||+||+|+. .++.||||++.... .....+.+|+.++++++||||+++++++.+.. ..
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQD-----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhchhhheecccCceEEEEEEE-CCCEEEEEEeecCc-----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 6799999999999999999987 48999999986542 23445667999999999999999999998744 46
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC-------CCCCeeeCCCCCCCeeeCCCCceEEe
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD-------CLPPIVHGDISSKNVLLDSEHEAHVS 907 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------~~~~ivH~Dlkp~NIll~~~~~~kl~ 907 (1031)
++||||+++|+|.++++.. .+++.+++.++.|++.||+|||+. +.++|+||||||+||+++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999999754 389999999999999999999976 22389999999999999999999999
Q ss_pred ccccccccCCCCC--CceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchh------
Q 043316 908 DFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS------ 974 (1031)
Q Consensus 908 Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~------ 974 (1031)
|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.........
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999987654332 2234678999999999886 35677899999999999999999998754332111
Q ss_pred -----hhhhHHHhh-hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 975 -----FSNMITEIN-QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 975 -----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......... ....+..+. ..........+.+++.+||+.||++|||++|+++.|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRD-YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCG-GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccc-cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 011111111 111111111 01112334568899999999999999999999999873
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=362.05 Aligned_cols=261 Identities=19% Similarity=0.296 Sum_probs=203.0
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||+||+|+..+++.||||++..... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 368999999999999999999888899999999976432 223357788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++ ++.+++.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 999985 7877776543 3588999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCC-------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR------- 989 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~------- 989 (1031)
.........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .............+..
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTS
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhcc
Confidence 5455566788999999999876 568999999999999999999999987554321 1111111110000000
Q ss_pred ----------CCCCChh--HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 990 ----------LPTPSRD--VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 990 ----------~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....... ......++.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 0011235778999999999999999999986
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-40 Score=371.63 Aligned_cols=258 Identities=21% Similarity=0.251 Sum_probs=207.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh-hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+.+|+.++++++||||+++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35799999999999999999955 579999999986543221 1224678999999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~ 911 (1031)
+||||+++++|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988886542 223478999999999999999999999 9999999999999987665 99999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+..............||+.|+|||++.+..++.++||||+||++|||++|+.||..... . ....+.. ....
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~---~~~~i~~---~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---R---LFEGIIK---GKYK 250 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---H---HHHHHHH---TCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---H---HHHHHHc---CCCC
Confidence 98876544444567899999999999998999999999999999999999999865321 1 1111111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111122346788999999999999999999975
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-40 Score=362.73 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=200.8
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhc--CCCCceeeeeeeEec----C
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE--IRHRNIIKFHGFCSN----A 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~~~~~~----~ 831 (1031)
.++|++.+.||+|+||+||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++.+ .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 36799999999999999999987 7999999998653 23445566666555 799999999998654 3
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhh--------hCCCCCeeeCCCCCCCeeeCCCCc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH--------HDCLPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
...++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 5689999999999999999643 4889999999999999999999 77 9999999999999999999
Q ss_pred eEEeccccccccCCCCCC----ceeeccccCcccccccccc------CCCccccchhhhHHHHHHHhC----------CC
Q 043316 904 AHVSDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMM------RATEKYDVHSFGVLALEVIKG----------NH 963 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltG----------~~ 963 (1031)
+||+|||+++........ .....||+.|+|||++.+. .+++++||||+||++|||+|| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999876543322 2234789999999999876 456799999999999999999 77
Q ss_pred CCCCcCccchhhhhhHHHhhhh-cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 964 PRDYVSTNFSSFSNMITEINQN-LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 964 P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
||.................... ..+..+. ..........+.+++.+||+.||++|||++||++.|++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPN-RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCCh-hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 7754433322222222211111 1111111 11122345578899999999999999999999999874
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=373.86 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=201.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 835 (1031)
.++|++.++||+|+||.||+|+. .+++.||||++++..... ....+.+.+|..++.++ +||||+++++++.+.+..+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 46899999999999999999965 468899999998754322 23345678899998877 8999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++..
T Consensus 130 lV~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999997643 589999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh---hhh-hHHHhhhhcCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS---FSN-MITEINQNLDHRLP 991 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~---~~~-~~~~~~~~~~~~~~ 991 (1031)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ... ....+. .....++
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~-~~~~~~p 282 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIP 282 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHH-HCCCCCC
T ss_pred ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHh-ccccCCC
Confidence 44444556678999999999999999999999999999999999999998644321111 011 111111 1122222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
.. ...++.+++.+||+.||++||++
T Consensus 283 ~~------~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 283 RS------LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp TT------SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred Cc------CCHHHHHHHHHHhcCCHhHcCCC
Confidence 21 12357789999999999999985
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-40 Score=378.53 Aligned_cols=255 Identities=20% Similarity=0.283 Sum_probs=207.6
Q ss_pred HHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
..++|++.+.||+|+||.||+|. ..+++.||+|++...... ..+.+.+.+|+.++++++||||+++++++.+++..+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS--ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH--HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 45789999999999999999995 467999999999765432 234677899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---CCCceEEeccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD---SEHEAHVSDFGIA 912 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a 912 (1031)
+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 9999999999999997653 488999999999999999999999 999999999999998 4678999999999
Q ss_pred cccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 913 KFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 913 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
..............||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+....... +.
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~~~----~~ 234 (444)
T 3soa_A 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--HRLYQQIKAGAYDF----PS 234 (444)
T ss_dssp BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTCCCC----CT
T ss_pred EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHhCCCCC----Cc
Confidence 8876555555667899999999999998999999999999999999999999864432 11111111111111 11
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+.+++.+||+.||++|||+.|+++
T Consensus 235 --~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 235 --PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp --TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 011111235778999999999999999999986
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=360.33 Aligned_cols=263 Identities=20% Similarity=0.295 Sum_probs=209.9
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC--eeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--HSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--~~~ 835 (1031)
++|.+.+.||+|+||+||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 57899999999999999999654 699999999976432 234677889999999999999999999998765 779
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee----CCCCceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL----DSEHEAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~ 911 (1031)
+||||+++++|.+++........+++.+++.++.|++.||+|||+. ||+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998765545589999999999999999999999 99999999999999 7888899999999
Q ss_pred ccccCCCCCCceeeccccCcccccccc--------ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAH--------MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
++...... ......||+.|+|||++. +..++.++||||+||++|||+||+.||......... ......+.
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~ 240 (319)
T 4euu_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKII 240 (319)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC-HHHHHHHH
T ss_pred ceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh-HHHHHHHh
Confidence 98775433 334567999999999986 467899999999999999999999998643332111 11111111
Q ss_pred hhcC------------------CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 984 QNLD------------------HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 984 ~~~~------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
...+ ...+............+.+++.+||+.||++|||++|+++..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 1111 112222222234445688999999999999999999999864
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=363.32 Aligned_cols=254 Identities=26% Similarity=0.446 Sum_probs=204.8
Q ss_pred HhccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|.+.+.||+|+||.||+|... .+..||||+++... .....+.+.+|+.++++++||||+++++++.+++.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 367899999999999999999763 34569999997643 22346789999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 999999999999999997543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 914 FLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 914 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
........ .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... .....+.......
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 274 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVISSVEEGYRLP 274 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHHHHTTCCCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHcCCCCC
Confidence 77543222 223345778999999998899999999999999999999 99998644331 1112222221111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+. .....+.+++.+||+.||++|||++||++.|+
T Consensus 275 ~~~------~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 275 APM------GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC------CcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 11236778999999999999999999999986
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-40 Score=364.20 Aligned_cols=251 Identities=21% Similarity=0.284 Sum_probs=206.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 36799999999999999999965 468999999986542 245678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC--CCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS--EHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~ 914 (1031)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||++..
T Consensus 79 v~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 999999999999997643 3588999999999999999999999 9999999999999997 78999999999988
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... . ....+.. .......
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~---~~~~i~~---~~~~~~~ 224 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--Q---IIENIMN---AEYTFDE 224 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHH---TCCCCCH
T ss_pred CCCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--H---HHHHHHc---CCCCCCh
Confidence 7543 3345677999999999999888899999999999999999999998654321 1 1111111 1111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........++.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111122346789999999999999999999986
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=354.41 Aligned_cols=252 Identities=23% Similarity=0.418 Sum_probs=208.8
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-----cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 5789999999999999999988889999999997643 24567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999997643 3588999999999999999999999 9999999999999999999999999999866432
Q ss_pred C-CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 S-SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....+........+...
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~-- 232 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRLA-- 232 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCCCCTTS--
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHhcCccCCCCCcC--
Confidence 1 11233456778999999998899999999999999999999 99998754331 112222222222222111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...+.+++.+||+.||++|||++|+++.|++
T Consensus 233 ----~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 233 ----STHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 2357788999999999999999999999863
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=369.92 Aligned_cols=252 Identities=24% Similarity=0.332 Sum_probs=201.9
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|+. .+++.||||++++.... .....+.+.+|..+++.+ +||||+++++++.+.+..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc-chhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 357899999999999999999965 56899999999775432 234567788999999988 699999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999999997643 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
............||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... ..+... ...++..
T Consensus 174 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~---~~i~~~-~~~~p~~- 246 (353)
T 3txo_A 174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--DLF---EAILND-EVVYPTW- 246 (353)
T ss_dssp SCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHHC-CCCCCTT-
T ss_pred cccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--HHH---HHHHcC-CCCCCCC-
Confidence 544444455678999999999999989999999999999999999999998654331 111 111111 1111211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCH------HHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTM------KKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~ 1027 (1031)
....+.+++.+||++||++||++ +|+++
T Consensus 247 -----~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 247 -----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -----SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -----CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 12256788999999999999998 66653
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=360.67 Aligned_cols=258 Identities=24% Similarity=0.327 Sum_probs=203.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+. .+++.||+|++..... ......+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 5799999999999999999964 5789999999865432 2234467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999997643 588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
... ......||+.|+|||.+.+..++.++||||+|+++|||+||+.||......... .... ....+.....
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~----~~~~----~~~~~~~~~~ 235 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA----IKHI----QDSVPNVTTD 235 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH----HHHH----SSCCCCHHHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHh----hccCCCcchh
Confidence 322 233457899999999999989999999999999999999999998755432111 1111 1111110000
Q ss_pred -HHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhhC
Q 043316 997 -VMDKLMSIMEVAILCLVESPEARP-TMKKVCNLLCK 1031 (1031)
Q Consensus 997 -~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~ 1031 (1031)
..+....+.+++.+|++.||++|| +++++.+.|++
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 001123678899999999999998 89999988763
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=352.18 Aligned_cols=252 Identities=25% Similarity=0.450 Sum_probs=208.5
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|+..++..||||+++... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-----MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-----BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-----CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 6799999999999999999998888899999997643 24567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999997643 3588999999999999999999999 9999999999999999999999999999876443
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||+..... ..............+...
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~-- 230 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLKVSQGHRLYRPHLA-- 230 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCCCCCCTTS--
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHHHHcCCCCCCCCcC--
Confidence 22 1223445678999999998889999999999999999999 99998654432 111111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...+.+++.+||+.||++|||++|+++.|++
T Consensus 231 ----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (268)
T 3sxs_A 231 ----SDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261 (268)
T ss_dssp ----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGG
T ss_pred ----hHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1257789999999999999999999999874
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=363.04 Aligned_cols=252 Identities=19% Similarity=0.336 Sum_probs=203.7
Q ss_pred HHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC---
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--- 832 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--- 832 (1031)
..++|++.+.||+|+||.||+|+.. +++.||||+++... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence 3578999999999999999999664 89999999997543 2335678999999999999999999999986543
Q ss_pred ------------------------------------------------------eeEEEEEeccCCCchhhcccCCcccc
Q 043316 833 ------------------------------------------------------HSFIVSEYLDRGSLTTILKDDAAAKE 858 (1031)
Q Consensus 833 ------------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~ 858 (1031)
..++||||+++++|.+++........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 37999999999999999988766666
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC------------Cceeec
Q 043316 859 FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS------------NWTAFA 926 (1031)
Q Consensus 859 l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~ 926 (1031)
.++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....... ......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 77888999999999999999999 999999999999999999999999999987754321 223456
Q ss_pred cccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHH
Q 043316 927 GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIME 1006 (1031)
Q Consensus 927 gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1006 (1031)
||+.|+|||++.+..++.++||||+||++|||++|..|+.. ........ .... .+.........+.+
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~---~~~~---~~~~~~~~~~~~~~ 304 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDV---RNLK---FPLLFTQKYPQEHM 304 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHH---HTTC---CCHHHHHHCHHHHH
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHh---hccC---CCcccccCChhHHH
Confidence 89999999999998999999999999999999998777211 11111111 1111 12223344456788
Q ss_pred HHHhhccCCCCCCCCHHHHHH
Q 043316 1007 VAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1007 li~~cl~~dP~~Rps~~evl~ 1027 (1031)
++.+||+.||++|||++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999986
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-39 Score=375.62 Aligned_cols=221 Identities=19% Similarity=0.222 Sum_probs=140.8
Q ss_pred CCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccccccccc
Q 043316 134 NNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSI 213 (1031)
Q Consensus 134 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~ 213 (1031)
.....+..+..++++++|++|++++|.+++ +| .++.+++|++|+|++|++++ +| ++++++|++|++++|++++ +
T Consensus 27 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~ 100 (457)
T 3bz5_A 27 AFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-L 100 (457)
T ss_dssp HTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-C
T ss_pred hcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-e
Confidence 334455556677778888888888888774 45 57777888888888887775 44 7777777788877777775 3
Q ss_pred CcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCC
Q 043316 214 PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLS 293 (1031)
Q Consensus 214 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 293 (1031)
| ++++++|++|+|++|++++ +| ++.+++|++|++++|++++. .++++++|++|++++|+..+.+ .+..++
T Consensus 101 ~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~ 170 (457)
T 3bz5_A 101 D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQT 170 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCT
T ss_pred e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCC
Confidence 3 6777777777777777775 44 67777777777777777763 2666777777777777544444 356666
Q ss_pred CCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEcc
Q 043316 294 SLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELC 373 (1031)
Q Consensus 294 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 373 (1031)
+|+.|++++|++++ +| ++.+++|+.|++++|++++. .++.+++|++|++++|++++ +| ++.+++|+.|+++
T Consensus 171 ~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 171 QLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCS 241 (457)
T ss_dssp TCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECC
T ss_pred cCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEee
Confidence 66666666666664 33 44555555555555555543 24445555555555555544 23 4444555555555
Q ss_pred ccccCC
Q 043316 374 RNHLSG 379 (1031)
Q Consensus 374 ~N~l~~ 379 (1031)
+|++++
T Consensus 242 ~N~l~~ 247 (457)
T 3bz5_A 242 VNPLTE 247 (457)
T ss_dssp SSCCSC
T ss_pred CCcCCC
Confidence 555543
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=355.27 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=194.6
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|.. .++.||||+++...........+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 5789999999999999999987 589999999876544333445678999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC--------CCceEEeccc
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS--------EHEAHVSDFG 910 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--------~~~~kl~Dfg 910 (1031)
||+++++|.++++.. .+++..++.++.|++.||+|||++...+|+||||||+||+++. ++.+||+|||
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp ECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999998643 4889999999999999999999991112999999999999986 6789999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++....... .....|++.|+|||.+.+..++.++||||+|+++|||++|+.||......... ............
T Consensus 162 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~ 235 (271)
T 3dtc_A 162 LAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA----YGVAMNKLALPI 235 (271)
T ss_dssp C---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH----HHHHTSCCCCCC
T ss_pred ccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HhhhcCCCCCCC
Confidence 998764332 23457899999999999989999999999999999999999998754432111 111111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.. ....+.+++.+||+.||++|||++|+++.|++
T Consensus 236 ~~~------~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 236 PST------CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp CTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred Ccc------cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 111 12357789999999999999999999999975
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=364.91 Aligned_cols=250 Identities=25% Similarity=0.335 Sum_probs=202.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++++.... .....+.+.+|+.+++++ +||||+++++++.+.+..|+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSC-SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhc-chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 6799999999999999999965 46899999999765432 233466788999999887 89999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++...
T Consensus 88 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999997643 588999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch----hhhhhHHHhhhhcCCCCCC
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS----SFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 992 (1031)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||........ ........+.. ....++.
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~ 240 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQIRIPR 240 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH-CCCCCCT
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc-CCCCCCC
Confidence 444445667899999999999998999999999999999999999999864322110 00111111111 1122222
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
. ....+.+++.+||+.||++||++
T Consensus 241 ~------~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 241 S------LSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp T------SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred C------CCHHHHHHHHHHhcCCHhHCCCC
Confidence 1 12357788999999999999995
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=361.68 Aligned_cols=255 Identities=21% Similarity=0.307 Sum_probs=207.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+.++++++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35799999999999999999965 4799999999976443211 12467899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEeccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFG 910 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg 910 (1031)
++||||+++++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999997643 588999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .. ...+... ..
T Consensus 164 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~---~~~~~~~---~~ 234 (326)
T 2y0a_A 164 LAHKIDFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ET---LANVSAV---NY 234 (326)
T ss_dssp TCEECCTT-SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HH---HHHHHHT---CC
T ss_pred CCeECCCC-CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HH---HHHHHhc---CC
Confidence 99877533 2334567999999999999889999999999999999999999998644321 11 1111111 11
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111112346778999999999999999999986
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=357.26 Aligned_cols=261 Identities=18% Similarity=0.262 Sum_probs=202.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 5799999999999999999965 5789999999976432 223457788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++ ++.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999986 5555554322 3589999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC-----
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP----- 991 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 991 (1031)
.........+|+.|+|||++.+.. ++.++||||+||++|||++|+.||-........................+
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 555556678899999999988765 79999999999999999999888533332221111111111100000000
Q ss_pred -------------CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 -------------TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 -------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............+.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000000112235778999999999999999999986
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=357.39 Aligned_cols=253 Identities=21% Similarity=0.336 Sum_probs=197.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh----------------------hhcHHHHHHHHHHHh
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE----------------------MADQDEFLNEVLALT 814 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~Ei~~l~ 814 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36799999999999999999964 5789999999865432111 112457899999999
Q ss_pred cCCCCceeeeeeeEec--CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCC
Q 043316 815 EIRHRNIIKFHGFCSN--AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDIS 892 (1031)
Q Consensus 815 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 892 (1031)
+++||||+++++++.+ .+..++||||+++++|.+++.. ..+++.++..++.|++.||+|||++ ||+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999986 5688999999999999887653 3589999999999999999999999 99999999
Q ss_pred CCCeeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccccC---CCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 893 SKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR---ATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 893 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
|+||+++.++.+||+|||++..............||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987765444445567999999999987755 3788999999999999999999986443
Q ss_pred ccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 970 TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .. ...+... ....+... .....+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~--~~---~~~~~~~-~~~~~~~~----~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 IM--CL---HSKIKSQ-ALEFPDQP----DIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HH--HH---HHHHHHC-CCCCCSSS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HH--HH---HHHHhcc-cCCCCCcc----ccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 21 11 1111111 11111110 11235778999999999999999999975
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=368.20 Aligned_cols=255 Identities=22% Similarity=0.346 Sum_probs=207.1
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
...++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 103 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH 103 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence 3457899999999999999999955 5799999999976543 223467789999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEEecccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGI 911 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~ 911 (1031)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.++ .+||+|||+
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 104 YLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EEEECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 99999999999999987643 488999999999999999999999 999999999999998654 599999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... .... ..+.... ...+
T Consensus 178 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~---~~i~~~~-~~~~ 250 (362)
T 2bdw_A 178 AIEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLY---AQIKAGA-YDYP 250 (362)
T ss_dssp CBCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHTC-CCCC
T ss_pred ceEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHH---HHHHhCC-CCCC
Confidence 9876533 334556899999999999998999999999999999999999999864432 1111 1111111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. .........+.+++.+||+.||++|||+.|+++
T Consensus 251 ~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 251 S--PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp T--TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c--ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1 111122346788999999999999999999875
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=355.99 Aligned_cols=260 Identities=23% Similarity=0.308 Sum_probs=200.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||+||+|+..+++.||||++..... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 57899999999999999999888899999999976432 2234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++ +|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99985 8988887543 3588899999999999999999999 9999999999999999999999999999877544
Q ss_pred CCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh-------------
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ------------- 984 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~------------- 984 (1031)
........+|+.|+|||++.+. .++.++||||+||++|||++|+.||....... ...........
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccc
Confidence 4444556789999999998764 58999999999999999999999987544321 11111111000
Q ss_pred hcCCCCCC----CCh-hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 NLDHRLPT----PSR-DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ~~~~~~~~----~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..++.... ... ........+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000 000 00011235778999999999999999999975
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=368.16 Aligned_cols=253 Identities=24% Similarity=0.457 Sum_probs=195.8
Q ss_pred hccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.+|++.+.||+|+||.||+|+.. ++..||||+++... .....+.|.+|+.++++++||||+++++++.+.+..
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 57999999999999999999764 57789999997643 223467899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++|+|.++++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999997643 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... .....++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~~i~~~~~~~~ 271 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEGYRLPP 271 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHHHHHTTEECCC
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCC
Confidence 6543221 122345778999999999999999999999999999998 99998644321 11122222111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+. .....+.+++.+||+.||++||++.||++.|+
T Consensus 272 ~~------~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 272 PM------DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CT------TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc------cccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 11 11236788999999999999999999999886
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=362.16 Aligned_cols=252 Identities=23% Similarity=0.313 Sum_probs=194.6
Q ss_pred HhccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.+.||+|+||.||+|+. .+++.||+|++++............+.+|+.++++++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36799999999999999999976 47899999999876543334456678899999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||+++++|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997643 478899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+... ...++..
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~---~~~i~~~-~~~~p~~ 243 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--KT---IDKILKC-KLNLPPY 243 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HH---HHHHHHT-CCCCCTT
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--HH---HHHHHhC-CCCCCCC
Confidence 6544333344567899999999999989999999999999999999999998754321 11 1111111 1111211
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||++|| ++.|+++
T Consensus 244 ------~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 244 ------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ------SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ------CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 123577889999999999999 7778765
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=365.40 Aligned_cols=252 Identities=25% Similarity=0.345 Sum_probs=206.5
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCe
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~ 833 (1031)
...++|.+.+.||+|+||.||+|+. .+++.||||++++..... ....+.+.+|..++..+ +||||+++++++.+.+.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 4567899999999999999999965 468999999997754322 23567788999998876 89999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999999997643 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++..
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~---~~i~~~-~~~~p~~ 240 (345)
T 1xjd_A 167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELF---HSIRMD-NPFYPRW 240 (345)
T ss_dssp CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT
T ss_pred hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHH---HHHHhC-CCCCCcc
Confidence 654444445667899999999999998999999999999999999999999864432 1111 111111 1122211
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHH-HHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMK-KVC 1026 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl 1026 (1031)
....+.+++.+||+.||++||++. |++
T Consensus 241 ------~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 241 ------LEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ------SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ------cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 123577889999999999999997 654
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=361.85 Aligned_cols=252 Identities=24% Similarity=0.350 Sum_probs=202.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 36799999999999999999965 4799999999865432 1234668899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++..+.
T Consensus 83 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999999997653 488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC--CCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 917 PHS--SNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 917 ~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+........+...... ..... .
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~-----~~~~~-~ 230 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-----KTYLN-P 230 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT-----CTTST-T
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc-----cccCC-c
Confidence 222 22345678999999999987765 789999999999999999999987655432222211111 01111 1
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++.+||+.||++|||++|+++
T Consensus 231 ---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 231 ---WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1112235678999999999999999999975
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=371.63 Aligned_cols=254 Identities=23% Similarity=0.365 Sum_probs=205.9
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|... +++.||||+++... .....+.|.+|++++++++||||+++++++.+++..++
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 367899999999999999999765 78999999987542 12235578899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 190 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999999997543 3588999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 917 PHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 917 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .....++..|+|||++.++.++.++|||||||++|||+| |+.||...... ... ..+........+..
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~---~~~~~~~~~~~~~~ 339 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTR---EFVEKGGRLPCPEL 339 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHH---HHHHTTCCCCCCTT
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH---HHHHcCCCCCCCCC
Confidence 32111 112235778999999998899999999999999999998 99998754431 111 11111111111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 340 ------~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 340 ------CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp ------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1235778899999999999999999999986
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-39 Score=363.38 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=206.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|++.+.... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc-cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 6799999999999999999954 56899999999765432 234577899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999998643 488999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........... ....+..
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~~~~-~~~~p~~- 242 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTFETT-VVTYPSA- 242 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHHHHC-CCCCCTT-
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhhc-ccCCCCc-
Confidence 3 33456789999999999864 458999999999999999999999986443321 11111111111 1111211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCC-HHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPT-MKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~ 1027 (1031)
....+.+++.+||+.||++||+ ++++.+
T Consensus 243 -----~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 243 -----WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1235778899999999999998 777653
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-40 Score=371.45 Aligned_cols=263 Identities=21% Similarity=0.328 Sum_probs=209.4
Q ss_pred HHHHHHHhccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeee
Q 043316 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKF 824 (1031)
Q Consensus 752 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l 824 (1031)
.+.....++|++.+.||+|+||.||+|++ .+++.||||+++.... ....+.+.+|++++.++ +||||+++
T Consensus 15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC---HHHHHHHHHHHHHHHhhcCCcceeee
Confidence 33444568899999999999999999963 3568999999976432 23457799999999999 79999999
Q ss_pred eeeEecCC-eeEEEEEeccCCCchhhcccCCc------------------------------------------------
Q 043316 825 HGFCSNAQ-HSFIVSEYLDRGSLTTILKDDAA------------------------------------------------ 855 (1031)
Q Consensus 825 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------ 855 (1031)
++++.+.+ ..++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998754 48999999999999999976532
Q ss_pred ---------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 856 ---------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 856 ---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 11288999999999999999999999 999999999999999999999999999987643322
Q ss_pred --CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 921 --NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 921 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
......+|+.|+|||++.+..++.++||||+||++|||+| |+.||......... . ...........+..
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~---~~~~~~~~~~~~~~---- 320 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-C---RRLKEGTRMRAPDY---- 320 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH-H---HHHHHTCCCCCCTT----
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH-H---HHHHcCCCCCCCCC----
Confidence 2344567899999999999999999999999999999998 99998755432211 1 11111112222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 321 --~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 321 --TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp --CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 1235778899999999999999999999986
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=355.38 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=206.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+. .+|+.||+|++++.... .....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 36799999999999999999965 47999999999765432 23456788899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.++++... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 84 v~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp EECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999998643 488899999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+... ...++..
T Consensus 158 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~---~~~~i~~~-~~~~p~~--- 225 (318)
T 1fot_A 158 DV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--K---TYEKILNA-ELRFPPF--- 225 (318)
T ss_dssp SC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHHC-CCCCCTT---
T ss_pred Cc---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--H---HHHHHHhC-CCCCCCC---
Confidence 32 24567999999999999989999999999999999999999998644321 1 11111111 1122211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
...++.+++.+|++.||++|| +++|+++
T Consensus 226 ---~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 ---FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 123577889999999999999 8888874
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=362.94 Aligned_cols=249 Identities=23% Similarity=0.303 Sum_probs=203.3
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 36799999999999999999965 67999999999765432 22345678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+ +|+|.+++... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 87 v~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 68898888654 3588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. .......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||+..... ..... +... ....+.
T Consensus 160 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~---i~~~-~~~~p~--- 229 (336)
T 3h4j_B 160 DG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP--NLFKK---VNSC-VYVMPD--- 229 (336)
T ss_dssp TS-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST--TCBCC---CCSS-CCCCCT---
T ss_pred CC-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH--HHHHH---HHcC-CCCCcc---
Confidence 33 23455679999999999988776 78999999999999999999998654321 11110 0000 011111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ....+.+++.+||+.||.+|||++|+++
T Consensus 230 ~---~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 230 F---LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp T---SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred c---CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1 1235678999999999999999999875
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=372.32 Aligned_cols=302 Identities=28% Similarity=0.376 Sum_probs=171.3
Q ss_pred CCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 99 SFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
.+++++.|+++++.+. .+|. +..+++|++|+|++|.+++. |. ++++++|++|++++|++++. |. ++++++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADI-TP-LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCCEE
T ss_pred HhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccC-hh-hcCCCCCCEE
Confidence 3556777777777766 3553 66677777777777777643 33 67777777777777777643 33 6667777777
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
+|++|.+++ +|. ++++++|++|++++|.+++ +| .++++++|++|+++ |.+.+.. .+.++++|+.|++++|.++
T Consensus 118 ~L~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITD-IDP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCC-CGG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCC-ChH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 777776663 333 6666777777777776653 33 36666666666664 4444322 2566666666666666665
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 338 (1031)
+. ..+..+++|++|++++|++++..| ++.+++|+.|++++|++++. +.+.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--------------------------~~l~ 240 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--------------------------GTLA 240 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--------------------------GGGG
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--------------------------hhhh
Confidence 43 235556666666666666654433 45555566666655555431 1344
Q ss_pred ccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccce
Q 043316 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418 (1031)
Q Consensus 339 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 418 (1031)
.+++|++|++++|.+++..| +..+++|+.|++++|++++..+ +..+++|+.|++++|++.+..+ +..+++|+.|
T Consensus 241 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 314 (466)
T 1o6v_A 241 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYL 314 (466)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE
T ss_pred cCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEE
Confidence 45555555555555554433 4555555555555555554332 4455555555555555554433 4445555555
Q ss_pred eccccccccccccccCCCCCCCeeccccccccC
Q 043316 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451 (1031)
Q Consensus 419 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 451 (1031)
++++|++.+..+ +..+++|+.|++++|++++
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 555555544433 3445555555555555543
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=361.71 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=206.8
Q ss_pred HHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|+.. +++.||||++++.... .....+.+.+|..++..+ +||+|+++++++.+.+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 3578999999999999999999664 5889999999775432 234567888999999988 799999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++.
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999999997643 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++..
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~---~~i~~~-~~~~p~~- 243 (353)
T 2i0e_A 171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELF---QSIMEH-NVAYPKS- 243 (353)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT-
T ss_pred cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHH---HHHHhC-CCCCCCC-
Confidence 54444445567899999999999999999999999999999999999999864432 1111 111111 1112211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
...++.+++.+||+.||++||+ ++|+++
T Consensus 244 -----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 244 -----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -----SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1236778999999999999995 566653
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=352.01 Aligned_cols=252 Identities=23% Similarity=0.421 Sum_probs=205.8
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||.||+|+..+++.||||+++... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-----MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-----CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 36799999999999999999998888899999997643 2356789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 98 TEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp ECCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999997642 3589999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ......+|+.|+|||++.+..++.++||||+|+++|||+| |+.||...... .....+........+...
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~- 246 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHIAQGLRLYRPHLA- 246 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCCCCCCTTC-
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHHHhcccCCCCCCcC-
Confidence 211 1223446788999999998899999999999999999998 99998754431 111222222222222111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...+.+++.+||+.||++|||++|+++.|+
T Consensus 247 -----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 247 -----SEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp -----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -----CHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 135778999999999999999999999886
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=371.38 Aligned_cols=346 Identities=28% Similarity=0.408 Sum_probs=195.5
Q ss_pred cCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccE
Q 043316 170 GKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGI 249 (1031)
Q Consensus 170 ~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 249 (1031)
..+++|+.|++++|.++ .+|. +..+++|++|++++|.+++. |. ++++++|++|++++|++++..| ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 34678888888888887 5664 77888888888888888754 33 8888888888888888885444 888888888
Q ss_pred EEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhcccccc
Q 043316 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329 (1031)
Q Consensus 250 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 329 (1031)
|++++|.+++..+ +.++++|++|++++|++++ ++ .+..+++|+.|+++ |.+.+.. .+.++++|++|++++|.+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 8888888877543 7788888888888888774 33 47777888888875 4444322 155555555555555555
Q ss_pred CCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhc
Q 043316 330 DGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409 (1031)
Q Consensus 330 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 409 (1031)
.+. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|+.|++++|++.+.
T Consensus 190 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~----- 258 (466)
T 1o6v_A 190 SDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNL----- 258 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC-----
T ss_pred CCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccc-----
Confidence 532 224555555555555555554433 44455555555555555432 2344444444444444444433
Q ss_pred cCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcE
Q 043316 410 RNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQV 489 (1031)
Q Consensus 410 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~ 489 (1031)
.+ +..+++|+.|++++|+++++.. +..+++|+.
T Consensus 259 -------------------~~--~~~l~~L~~L~l~~n~l~~~~~--------------------------~~~l~~L~~ 291 (466)
T 1o6v_A 259 -------------------AP--LSGLTKLTELKLGANQISNISP--------------------------LAGLTALTN 291 (466)
T ss_dssp -------------------GG--GTTCTTCSEEECCSSCCCCCGG--------------------------GTTCTTCSE
T ss_pred -------------------hh--hhcCCCCCEEECCCCccCcccc--------------------------ccCCCccCe
Confidence 22 3444444444444444433221 233334444
Q ss_pred EEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCccc
Q 043316 490 LDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQF 569 (1031)
Q Consensus 490 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 569 (1031)
|++++|++.+..+ +..+++|+.|++++|++++..| +..+++|++|++++|++++. ..+..+++|++|++++|++
T Consensus 292 L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred EEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCcc
Confidence 4444444443222 3444444444444444443332 34444444444444444432 2344444444444444444
Q ss_pred CCCCchhhccccccCceeccCcccC
Q 043316 570 NHKIPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 570 ~~~~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
++..| +..+++|+.|++++|.++
T Consensus 366 ~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 366 SDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp CBCGG--GTTCTTCCEEECCCEEEE
T ss_pred Cccch--hhcCCCCCEEeccCCccc
Confidence 44433 444444555555555444
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-39 Score=359.58 Aligned_cols=247 Identities=22% Similarity=0.274 Sum_probs=206.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++.+.... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc-cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 6799999999999999999965 47999999999765432 234567889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999998643 488999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~---~~i~~~-~~~~p~~---- 260 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIY---EKIVSG-KVRFPSH---- 260 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT----
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHH---HHHHcC-CCCCCCC----
Confidence 2 2456799999999999998999999999999999999999999864432 1111 111111 1112211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
....+.+++.+||+.||++||+ ++|+++
T Consensus 261 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1235778999999999999998 888764
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=360.81 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=181.5
Q ss_pred cceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEEEec
Q 043316 764 KYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
.+.||+|+||.||+|.. .+++.||||++... ....+.+|+.+++.+. ||||+++++++.++...++||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc
Confidence 47899999999999965 57899999998653 3456779999999997 999999999999999999999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEEeccccccccCCC
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~ 918 (1031)
++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||+++.....
T Consensus 89 ~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 89 NGGELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CSCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 9999999998653 589999999999999999999999 999999999999998766 7999999999876655
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc--hhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF--SSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
........+|+.|+|||++.+..++.++||||+||++|||++|+.||....... ......... ............
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~ 239 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK---IKKGDFSFEGEA 239 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH---HTTTCCCCCSHH
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH---HHcCCCCCCccc
Confidence 444566778999999999999999999999999999999999999987544321 111111111 122222222222
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 2233456889999999999999999998864
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=365.95 Aligned_cols=256 Identities=24% Similarity=0.367 Sum_probs=209.0
Q ss_pred hccCccceeecCCCccEEEEEe--------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
++|.+.+.||+|+||.||+|+. .++..||||+++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 6799999999999999999964 234689999997653 233467899999999999 8999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+++..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 99999999999999999999976432 23589999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||......
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-- 300 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-- 300 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999999999987654322 2234556889999999999999999999999999999999 99998654321
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+........+.. ...++.+++.+||+.||++|||++|+++.|++
T Consensus 301 ---~~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 349 (382)
T 3tt0_A 301 ---ELFKLLKEGHRMDKPSN------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349 (382)
T ss_dssp ---HHHHHHHTTCCCCCCSS------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---HHHHHHHcCCCCCCCcc------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11222222222222211 12357789999999999999999999999863
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=355.60 Aligned_cols=257 Identities=22% Similarity=0.358 Sum_probs=208.9
Q ss_pred HhccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 36799999999999999999964 345899999997543 233467889999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc---------------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCC
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA---------------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGD 890 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 890 (1031)
+..++||||+++++|.+++..... ...+++.+++.++.||+.||+|||++ +|+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccc
Confidence 999999999999999999976432 13478999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCC
Q 043316 891 ISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDY 967 (1031)
Q Consensus 891 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~ 967 (1031)
|||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||+||++|||++ |+.||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999876543321 233456788999999998889999999999999999999 9999875
Q ss_pred cCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.... .. ...+........+.. ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 256 ~~~~--~~---~~~~~~~~~~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 256 IPPE--RL---FNLLKTGHRMERPDN------CSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp CCGG--GH---HHHHHTTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCHH--HH---HHHhhcCCcCCCCcc------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 4432 11 111222111222211 12357789999999999999999999999863
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=364.69 Aligned_cols=255 Identities=24% Similarity=0.364 Sum_probs=204.9
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|++.+.||+|+||+||+|.. .+++.||||+++.... ......+.+|+.++++++||||+++++++.+.+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS---EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 6789999999999999999974 2467899999965332 234567899999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCC----ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceE
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA----AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAH 905 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~k 905 (1031)
..++||||+++|+|.++++... ....+++.+++.++.||+.||+|||++ ||+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999997643 123588999999999999999999999 999999999999999655 499
Q ss_pred EeccccccccCCCC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHh
Q 043316 906 VSDFGIAKFLNPHS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
|+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... . ....+
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~---~~~~i 299 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E---VLEFV 299 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H---HHHHH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHH
Confidence 99999998543221 22334567899999999999999999999999999999998 99998654331 1 11222
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
........+.. ....+.+++.+||+.||++|||+.||++.|+
T Consensus 300 ~~~~~~~~~~~------~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 300 TSGGRMDPPKN------CPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HTTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HcCCCCCCCcc------CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 22111111111 1225778999999999999999999999886
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=354.98 Aligned_cols=251 Identities=25% Similarity=0.406 Sum_probs=197.7
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|+. .++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence 5789999999999999999987 5789999998653 246788999999999999999999999874 479999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-eEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-AHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++........+++..++.++.|+++||+|||+.+..||+||||||+||+++.++. +||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999987665556788999999999999999999932229999999999999998886 79999999986543
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||+........... .......+.... .
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~---~- 228 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW---AVHNGTRPPLIK---N- 228 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH---HHHTTCCCCCBT---T-
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH---HHhcCCCCCccc---c-
Confidence 2 23456899999999999989999999999999999999999998754432211111 111111111111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 229 --~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 229 --LPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp --CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1235778899999999999999999999886
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=361.95 Aligned_cols=258 Identities=22% Similarity=0.381 Sum_probs=208.2
Q ss_pred HHhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 830 (1031)
..++|++.+.||+|+||.||+|+.. +++.||||+++... .....+.+.+|+.++++++||||+++++++.+
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3578999999999999999999663 45899999997643 22346789999999999999999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCc---------------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeC
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAA---------------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHG 889 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 889 (1031)
++..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ ||+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 9999999999999999999976421 14689999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCceEEeccccccccCCCC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCC
Q 043316 890 DISSKNVLLDSEHEAHVSDFGIAKFLNPHS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRD 966 (1031)
Q Consensus 890 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~ 966 (1031)
||||+||+++.++.+||+|||+++...... .......+|+.|+|||++.+..++.++||||+||++|||+| |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 999999999999999999999998654322 12234567899999999998899999999999999999999 999986
Q ss_pred CcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 967 YVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..... . ....+........+. . ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 279 ~~~~~--~---~~~~~~~~~~~~~~~---~---~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~ 332 (343)
T 1luf_A 279 GMAHE--E---VIYYVRDGNILACPE---N---CPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332 (343)
T ss_dssp TSCHH--H---HHHHHHTTCCCCCCT---T---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCChH--H---HHHHHhCCCcCCCCC---C---CCHHHHHHHHHHcccCcccCCCHHHHHHHHHH
Confidence 54321 1 111111111111111 1 12367789999999999999999999999863
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=353.78 Aligned_cols=258 Identities=22% Similarity=0.349 Sum_probs=201.5
Q ss_pred hccCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--A 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~ 831 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 6799999999999999999973 368999999987542 2346788999999999999999999999855 3
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 56899999999999999997653 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-----------hhh
Q 043316 912 AKFLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-----------FSN 977 (1031)
Q Consensus 912 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-----------~~~ 977 (1031)
+........ ......++..|+|||++.+..++.++||||+|+++|||+||..||......... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987654322 122345677899999999999999999999999999999999997643321100 001
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.............+. .....+.+++.+||+.||++|||++|+++.|++
T Consensus 241 ~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 241 LIELLKNNGRLPRPD------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHHHHTTCCCCCCT------TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhccCcCCCCc------CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 111111111111111 112367889999999999999999999999863
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=363.03 Aligned_cols=254 Identities=14% Similarity=0.170 Sum_probs=204.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++++ +||||+++++++.+++..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS------RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC------SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc------chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 5789999999999999999964 679999999986542 233578999999999 89999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-----eEEecccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-----AHVSDFGI 911 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~ 911 (1031)
||||+ +++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 899999998642 3689999999999999999999999 9999999999999999887 99999999
Q ss_pred ccccCCCCCC-------ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc-hhhhhhHHHhh
Q 043316 912 AKFLNPHSSN-------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF-SSFSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~-~~~~~~~~~~~ 983 (1031)
++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+....
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~ 236 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK 236 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhh
Confidence 9876443221 245679999999999999999999999999999999999999987654321 11111111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.... .....+...++.+++..||+.||.+||++++|.+.|+
T Consensus 237 ~~~~------~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 237 RATP------IEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHSC------HHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred ccCC------HHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 1110 0100011126888999999999999999999999875
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=363.72 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=205.4
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ..+...+.+|+.++++++||||+++++++.+.+..++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 36799999999999999999955 578999999986543 2235678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC--CCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS--EHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~ 914 (1031)
||||+++|+|.+++.... ..+++.++..++.||+.||+|||+. ||+||||||+||+++. ++.+||+|||++..
T Consensus 126 v~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp EEECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EEEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccccee
Confidence 999999999999997643 3588999999999999999999999 9999999999999984 46799999999997
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+...
T Consensus 201 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~i~~~~~~~~~~~---- 273 (387)
T 1kob_A 201 LNPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQNVKRCDWEFDEDA---- 273 (387)
T ss_dssp CCTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHCCCCCCSST----
T ss_pred cCCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCCCccc----
Confidence 7543 3345567999999999999989999999999999999999999998754321 11111111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......++.+++.+||+.||++|||+.|+++
T Consensus 274 --~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 274 --FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp --TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred --cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1112236778999999999999999999986
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=364.37 Aligned_cols=250 Identities=25% Similarity=0.313 Sum_probs=195.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHH-HhcCCCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLA-LTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||++++..... ....+.+.+|..+ ++.++||||+++++++.+.+..|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 46899999999999999999965 468999999997755322 2334566777776 57789999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++..
T Consensus 116 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999999997643 478899999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++..
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~---~~i~~~-~~~~~~~-- 261 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMY---DNILNK-PLQLKPN-- 261 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHH---HHHHHS-CCCCCSS--
T ss_pred ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHH---HHHHhc-ccCCCCC--
Confidence 4444445667899999999999999999999999999999999999999864432 1111 111111 1112211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVC 1026 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 1026 (1031)
....+.+++.+||+.||++||++.+..
T Consensus 262 ----~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 262 ----ITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred ----CCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 112567889999999999999985433
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-39 Score=357.24 Aligned_cols=257 Identities=22% Similarity=0.384 Sum_probs=209.1
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~ 831 (1031)
++|++.+.||+|+||.||+|.. .+++.||||+++.... ....+.+.+|+.+++++ +||||+++++++.++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh---HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 6799999999999999999964 3578999999976432 23467899999999999 899999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc---------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA---------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ ||+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 999999999999999999976532 12489999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||++......... .....+++.|+|||++.+..++.++||||+|+++|||+| |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 9999999999999999877544322 223456789999999999899999999999999999999 9999875543211
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.... .........+.. ....+.+++.+||+.||.+|||+.|+++.|++
T Consensus 257 -~~~~---~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 257 -FYKM---IKEGFRMLSPEH------APAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp -HHHH---HHHTCCCCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -HHHH---hccCCCCCCccc------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 1111 111111111111 12367889999999999999999999999874
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=347.26 Aligned_cols=255 Identities=29% Similarity=0.438 Sum_probs=203.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhh---hcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEM---ADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++.......+. ...+.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5789999999999999999965 57999999998654322211 12278899999999999999999999997665
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCCCCc-----eEEe
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDSEHE-----AHVS 907 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~kl~ 907 (1031)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ + |+||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 69999999999998886543 3589999999999999999999999 8 999999999999998876 9999
Q ss_pred ccccccccCCCCCCceeeccccCcccccccc--ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH--MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
|||+++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||............... ...
T Consensus 172 Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--~~~ 246 (287)
T 4f0f_A 172 DFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EEG 246 (287)
T ss_dssp CCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH--HSC
T ss_pred CCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh--ccC
Confidence 9999985432 345567899999999984 455788999999999999999999998755443222121111 111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.. ....+.+++.+||+.||++|||++|+++.|++
T Consensus 247 ~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 247 LRPTIPED------CPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CCCCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCCCCCcc------cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 22222211 12367889999999999999999999999975
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-39 Score=356.47 Aligned_cols=262 Identities=19% Similarity=0.312 Sum_probs=191.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS---EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS---TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc---ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence 35789999999999999999965 468999999986543 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCC---ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDA---AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
||||++ ++|.+++.... ....+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccce
Confidence 999998 59999886432 123588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh--------
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ-------- 984 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~-------- 984 (1031)
.............+|+.|+|||++.+. .++.++||||+||++|||++|+.||....... ...........
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPS 235 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGG
T ss_pred ecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhh
Confidence 876544445566789999999998764 58999999999999999999999987554321 11111110000
Q ss_pred -----hcCCCC----CCCChhHH------HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 -----NLDHRL----PTPSRDVM------DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 -----~~~~~~----~~~~~~~~------~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...... +....... .....+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000 00000000 11236789999999999999999999875
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=360.08 Aligned_cols=262 Identities=23% Similarity=0.236 Sum_probs=202.9
Q ss_pred HHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh-hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 755 IKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 755 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
....++|++.+.||+|+||.||+|.. .+++.||+|++....... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 44567899999999999999999955 578999999987654321 2345678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc-------------------------------------cccCCHHHHHHHHHHHHHHH
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA-------------------------------------AKEFGWNQRMNVIKGVANAL 875 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~i~~~L 875 (1031)
..++||||+++|+|.+++..... ...+++..++.++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999863110 11235678889999999999
Q ss_pred HHhhhCCCCCeeeCCCCCCCeeeCCCC--ceEEeccccccccCCCCC----CceeeccccCccccccccc--cCCCcccc
Q 043316 876 SYLHHDCLPPIVHGDISSKNVLLDSEH--EAHVSDFGIAKFLNPHSS----NWTAFAGTFGYAAPEIAHM--MRATEKYD 947 (1031)
Q Consensus 876 ~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~sD 947 (1031)
+|||+. +|+||||||+||+++.++ .+||+|||++..+..... ......||+.|+|||++.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998777 899999999986543221 2345678999999999875 67889999
Q ss_pred chhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 948 VHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 948 vwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
|||+||++|||++|+.||....... ....... ................+.+++.+||+.||++|||+.|+++
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDAD-----TISQVLN---KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHHHH---CCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCChHH-----HHHHHHh---cccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 9999999999999999986544321 1111111 1111111111112346788999999999999999999986
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-39 Score=360.59 Aligned_cols=250 Identities=22% Similarity=0.309 Sum_probs=188.5
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 367999999999999999999664 68899999987542 34567899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~ 913 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 999999999999997643 488999999999999999999999 9999999999999975 8899999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.........+. .+.........+.
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----~i~~~~~~~~~~~ 274 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFR----RILNCEYYFISPW 274 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHH----HHHTTCCCCCTTT
T ss_pred ccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHH----HHHhCCCccCCch
Confidence 76432 223456789999999999998999999999999999999999999865443211111 1111111111110
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++.+||+.||++|||+.|+++
T Consensus 275 ---~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 275 ---WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ---TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---hhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1112236778999999999999999999986
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=348.64 Aligned_cols=252 Identities=24% Similarity=0.394 Sum_probs=185.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... .+....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-YKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhh-hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 46899999999999999999965 5799999999976542 223346789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999997642 3588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........|++.|+|||++.+..++.++||||+|+++|||++|+.||....... ....... .+...+..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~-~~~~~~~~--- 234 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLNKVVL-ADYEMPSF--- 234 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCS-SCCCCCTT---
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHHHHhh-cccCCccc---
Confidence 44433445678999999999998889999999999999999999999987543311 0111000 01111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 235 ---~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 235 ---LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1235778999999999999999999975
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-39 Score=373.73 Aligned_cols=253 Identities=22% Similarity=0.415 Sum_probs=207.4
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|.+.+.||+|+||.||+|...++..||||+++... ...+.|.+|+.++++++||||+++++++. .+..++|
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 46789999999999999999998888999999997643 35778999999999999999999999986 5678999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.++++... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 261 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp ECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 99999999999997643 23578899999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ......++..|+|||++.++.++.++|||||||++|||+| |+.||...... . ....+........+.
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~---~~~~i~~~~~~~~~~--- 408 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--E---VIRALERGYRMPRPE--- 408 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H---HHHHHHHTCCCCCCT---
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCC---
Confidence 211 1223446788999999998899999999999999999999 99998754331 1 112222221111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||+.||++|||+++|++.|+.
T Consensus 409 ---~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~ 441 (454)
T 1qcf_A 409 ---NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441 (454)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 112367789999999999999999999999874
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=370.40 Aligned_cols=264 Identities=21% Similarity=0.266 Sum_probs=208.2
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS 829 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~ 829 (1031)
+.++....++|++.++||+|+||+||+|+.. +++.||||++++..... ....+.+.+|+.++..++||||+++++++.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-RAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 3444445689999999999999999999664 58899999997643322 223445889999999999999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
+++..|+||||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++++||+||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 9999999999999999999997632 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC-ceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 910 GIAKFLNPHSSN-WTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 910 g~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
|+|+........ ....+||+.|+|||++. ++.++.++||||+||++|||++|+.||...... ..+........
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~ 298 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHKE 298 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHHhhhhccc
Confidence 999876543322 23467999999999987 456899999999999999999999998654321 11111111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCC--CCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEA--RPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 1027 (1031)
. ..++..... ....+.+++.+|+..+|++ ||+++|+++
T Consensus 299 ~---~~~p~~~~~---~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 299 R---FQFPTQVTD---VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp H---CCCCSSCCC---SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred c---ccCCccccc---CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1 111111111 1225678899999998888 999999875
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-39 Score=360.93 Aligned_cols=257 Identities=22% Similarity=0.356 Sum_probs=206.1
Q ss_pred HhccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~ 830 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++.+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 47899999999999999999964 246789999997543 223457889999999999 89999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCcc--------------------ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCC
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAA--------------------KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGD 890 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 890 (1031)
.+..++||||+++|+|.+++...... ..+++.+++.++.||+.||+|||++ ||+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999999999765321 2478999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCC
Q 043316 891 ISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDY 967 (1031)
Q Consensus 891 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~ 967 (1031)
|||+||+++.++.+||+|||++......... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876543322 233557889999999998899999999999999999998 9999875
Q ss_pred cCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..... .... ..........+.. ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 278 ~~~~~-~~~~---~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 278 IPVDA-NFYK---LIQNGFKMDQPFY------ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CCCSH-HHHH---HHHTTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCcHH-HHHH---HHhcCCCCCCCCC------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 54321 1111 1111111111111 1236778999999999999999999999886
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=361.91 Aligned_cols=249 Identities=22% Similarity=0.317 Sum_probs=197.2
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|...+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E 166 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVME 166 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 34467899999999999965 579999999987643 2346788999999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee--CCCCceEEeccccccccCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL--DSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|+++++|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 167 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 167 YVDGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp CCTTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred CCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 999999999886542 3588999999999999999999999 99999999999999 5678999999999997754
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+... .........
T Consensus 242 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~---~~~~i~~~---~~~~~~~~~ 312 (373)
T 2x4f_A 242 R-EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--E---TLNNILAC---RWDLEDEEF 312 (373)
T ss_dssp T-CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHHT---CCCSCSGGG
T ss_pred c-cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--H---HHHHHHhc---cCCCChhhh
Confidence 3 2334557999999999999888999999999999999999999998654331 1 11111111 111111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+++.+||+.||.+|||++|+++
T Consensus 313 ~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 313 QDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 122346788999999999999999999986
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=368.08 Aligned_cols=249 Identities=24% Similarity=0.341 Sum_probs=206.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|+. .+|+.||||++..... ......+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 6799999999999999999965 4799999999976542 2233467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++.+++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999997643 589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+..... .....+..... ..+. .
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~~~i~~~~~-~~p~---~ 238 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLFKKICDGIF-YTPQ---Y 238 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHHHHHHTTCC-CCCT---T
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHHHHHhcCCc-CCCc---c
Confidence 3 33455679999999999988765 78999999999999999999998754321 11122211111 1111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 239 ---~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 239 ---LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ---CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1125778999999999999999999985
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=354.05 Aligned_cols=264 Identities=23% Similarity=0.362 Sum_probs=200.5
Q ss_pred HHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC--CCCceeeeeeeEecC-
Q 043316 755 IKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI--RHRNIIKFHGFCSNA- 831 (1031)
Q Consensus 755 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l--~h~niv~l~~~~~~~- 831 (1031)
....++|++.+.||+|+||.||+|+. .++.||||++... ....+.+|.+++... +||||+++++++.+.
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 34457899999999999999999987 4899999998543 233445565665554 899999999999877
Q ss_pred ---CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC-----CCCeeeCCCCCCCeeeCCCCc
Q 043316 832 ---QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC-----LPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 832 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
...++||||+++|+|.++++.. .+++.+++.++.|++.||+|||+.+ .++|+||||||+||+++.++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 7889999999999999999654 4889999999999999999999752 338999999999999999999
Q ss_pred eEEeccccccccCCCCCC----ceeeccccCccccccccccCCCcc------ccchhhhHHHHHHHhC----------CC
Q 043316 904 AHVSDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMMRATEK------YDVHSFGVLALEVIKG----------NH 963 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------sDvwslG~il~elltG----------~~ 963 (1031)
+||+|||+++.+...... .....||+.|+|||++.+.....+ +|||||||++|||+|| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 999999999876443222 124578999999999987766554 9999999999999999 56
Q ss_pred CCCCcCccchhhhhhHHHhh-hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 964 PRDYVSTNFSSFSNMITEIN-QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 964 P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
||.................. ....+..+. .........++.+++.+||+.||++|||+.|+++.|++
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPN-RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cHhhhcCCCCchhhhHHHHhhhccCccccc-cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 65443332222222222111 111111111 11112445678899999999999999999999999863
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-39 Score=367.01 Aligned_cols=259 Identities=19% Similarity=0.250 Sum_probs=206.4
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
++....++|++.++||+|+||+||+|+. .+++.||+|++++..... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3334467899999999999999999965 468999999997644322 23345688999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
+..|+||||+++|+|.++++.. .+++..+..++.||+.||+|||++ ||+||||||+||+++.++++||+|||+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 9999999999999999999753 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-CceeeccccCccccccccccC----CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 912 AKFLNPHSS-NWTAFAGTFGYAAPEIAHMMR----ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 912 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
++....... .....+||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ......+.....
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~-- 290 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSKIMNHKN-- 290 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTHHH--
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--hhHHHHHHhccc--
Confidence 987654322 223567999999999998655 78999999999999999999999864432 111111111111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCC--CCCHHHHHH
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEA--RPTMKKVCN 1027 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 1027 (1031)
....+... .....+.++|.+|++.+|++ ||+++||++
T Consensus 291 ~~~~p~~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 291 SLTFPDDN----DISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HCCCCTTC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred cccCCCcc----cccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 11111110 01235678899999999999 999999975
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=358.66 Aligned_cols=252 Identities=23% Similarity=0.287 Sum_probs=192.7
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-----AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-----TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-----cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 367999999999999999999654 79999999986543 234567899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc--eEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE--AHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 914 (1031)
||||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+++.
T Consensus 94 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 94 IMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 999999999999997543 589999999999999999999999 9999999999999987765 99999999985
Q ss_pred cCCCCCCceeeccccCccccccccccCCCcc-ccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEK-YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.... .......||+.|+|||++.+..+..+ +||||+||++|||++|+.||....... .+......+... ....+..
T Consensus 168 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 244 (361)
T 3uc3_A 168 SVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSV-KYSIPDD 244 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTT-CCCCCTT
T ss_pred cccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcC-CCCCCCc
Confidence 4322 22345679999999999988777655 899999999999999999987544321 112222222111 1111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. .....+.+++.+||+.||++|||+.|+++
T Consensus 245 ~----~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 245 I----RISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp S----CCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred C----CCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 0 11235778999999999999999999975
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=346.64 Aligned_cols=251 Identities=19% Similarity=0.289 Sum_probs=203.8
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--CeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~~l 836 (1031)
++|.+.+.||+|+||.||+|+. +++.||||++..... .....+.+.+|+.++++++||||+++++++.+. +..++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDW--STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTC--CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 6789999999999999999987 589999999976532 223467799999999999999999999999887 78899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999998653 23589999999999999999999998 8 99999999999999999999999998765
Q ss_pred cCCCCCCceeeccccCccccccccccCCCc---cccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATE---KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
... ....+|+.|+|||++.+..++. ++||||+||++|||++|+.||........ .............+
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~ 233 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----GMKVALEGLRPTIP 233 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----HHHHHHSCCCCCCC
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----HHHHHhcCCCCCCC
Confidence 432 2346799999999998765544 79999999999999999999875443211 11111111122222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. ....+.+++.+||+.||++|||++|+++.|++
T Consensus 234 ~~------~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 234 PG------ISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp TT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11 12357788999999999999999999999863
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=368.75 Aligned_cols=248 Identities=26% Similarity=0.419 Sum_probs=203.3
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-eeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ-HSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~-~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .++.||||+++... ..+.|.+|+.++++++||||+++++++.+.. ..++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 46789999999999999999987 47899999987642 4567999999999999999999999987654 7899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.++++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 265 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999998653 23468899999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. .....++..|+|||++.+..++.++|||||||++|||+| |+.||...... . ....+........+..
T Consensus 341 ~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~---~~~~i~~~~~~~~p~~-- 410 (450)
T 1k9a_A 341 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--D---VVPRVEKGYKMDAPDG-- 410 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--T---HHHHHHTTCCCCCCTT--
T ss_pred cc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCCc--
Confidence 22 223467889999999999999999999999999999998 99998755432 1 1122222222222211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||+.|+++.|+
T Consensus 411 ----~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 411 ----CPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1236778899999999999999999999886
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=375.44 Aligned_cols=254 Identities=22% Similarity=0.416 Sum_probs=208.9
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
..+|++.+.||+|+||.||+|.+. +++.||||+++... ...+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 367899999999999999999765 48899999997543 346789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.++++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 999999999999997643 24588999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 917 PHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 917 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... ......++..|+|||++.+..++.++|||||||++|||+| |+.||...... . ....+........+..
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~---~~~~~~~~~~~~~~~~- 443 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--Q---VYELLEKDYRMERPEG- 443 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G---HHHHHHTTCCCCCCTT-
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCCC-
Confidence 3221 1123345778999999998899999999999999999999 99998755432 1 1122222222221211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+.+++.+||+.||++|||+.||++.|++
T Consensus 444 -----~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 444 -----CPEKVYELMRACWQWNPSDRPSFAEIHQAFET 475 (495)
T ss_dssp -----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 12357788999999999999999999999874
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=364.22 Aligned_cols=264 Identities=20% Similarity=0.293 Sum_probs=209.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC--eeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--HSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--~~~ 835 (1031)
++|.+.++||+|+||+||+|.. .+++.||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 5789999999999999999965 4699999999976432 234677889999999999999999999998755 779
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee----CCCCceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL----DSEHEAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~ 911 (1031)
+||||+++|+|.++++.......+++.+++.++.||+.||+|||+. ||+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999998765445589999999999999999999999 99999999999999 7788899999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc--------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM--------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... ......+.
T Consensus 163 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~~ 240 (396)
T 4eut_A 163 ARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKII 240 (396)
T ss_dssp CEECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-HHHHHHHH
T ss_pred ceEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-HHHHHHHh
Confidence 9876543 23345678999999999865 56788999999999999999999998643322111 11111111
Q ss_pred hhcC------------------CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLD------------------HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...+ ...+............+.+++.+||+.||++||+++|+++.++
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 1111 1112222222344457889999999999999999999998775
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=345.35 Aligned_cols=249 Identities=28% Similarity=0.447 Sum_probs=202.5
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ......+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecccc-chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 47899999999999999999954 5678999999866542 223446778999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999999997643 488899999999999999999999 99999999999999999999999999987543
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... ... ..+.. .....+..
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~---~~~~~-~~~~~~~~--- 229 (279)
T 3fdn_A 161 SS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETY---KRISR-VEFTFPDF--- 229 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHH---HHHHH-TCCCCCTT---
T ss_pred cc--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHH---HHHHh-CCCCCCCc---
Confidence 22 234567899999999999988999999999999999999999998644321 111 11111 11112211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 230 ---~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 230 ---VTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp ---SCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ---CCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1125678899999999999999999986
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=355.01 Aligned_cols=258 Identities=21% Similarity=0.342 Sum_probs=191.7
Q ss_pred HhccCccceeecCCCccEEEEEeCC-C---cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPS-G---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.+.||+|+||.||+|.... + ..||||+++.... .....+.+.+|++++++++||||+++++++.....
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 3579999999999999999997643 3 2899999976532 22346789999999999999999999999987765
Q ss_pred e------EEEEEeccCCCchhhcccCCc---cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 834 S------FIVSEYLDRGSLTTILKDDAA---AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 834 ~------~lv~e~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
. ++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 999999999999999965321 12588999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHH
Q 043316 905 HVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~ 981 (1031)
||+|||+++....... ......+++.|+|||.+.+..++.++||||+||++|||++ |+.||...... . ....
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~---~~~~ 251 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--E---IYNY 251 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G---HHHH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--H---HHHH
Confidence 9999999987644322 1234456789999999999899999999999999999999 99998754432 1 1111
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.........+.. ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 252 ~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 295 (323)
T 3qup_A 252 LIGGNRLKQPPE------CMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295 (323)
T ss_dssp HHTTCCCCCCTT------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HhcCCCCCCCCc------cCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111111111 12357889999999999999999999998863
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=372.46 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=206.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|+. .+|+.||||++.+.... .....+.+.+|+.++++++||||+++++++.+....|+|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 6789999999999999999966 47999999999765432 234567889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 838 SEYLDRGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|||+++|+|.+++..... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.+|++||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999876432 34589999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......+... ...++..
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~~i~~~-~~~~p~~--- 415 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRVLEQ-AVTYPDK--- 415 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHHHHHHC-CCCCCTT---
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHHHHhhc-ccCCCcc---
Confidence 544444556899999999999998999999999999999999999999875432111 11111111111 1122211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
....+.+++.+||+.||++||++
T Consensus 416 ---~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 416 ---FSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ---cCHHHHHHHHHhccCCHhHCCCC
Confidence 12356788999999999999975
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=352.85 Aligned_cols=255 Identities=20% Similarity=0.287 Sum_probs=207.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 46799999999999999999965 4799999999976443221 12467899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEeccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFG 910 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg 910 (1031)
++||||+++++|.+++.... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999997643 478899999999999999999999 999999999999999888 79999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... . ....+.. ...
T Consensus 165 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~---~~~~i~~---~~~ 235 (321)
T 2a2a_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--E---TLANITS---VSY 235 (321)
T ss_dssp TCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--H---HHHHHHT---TCC
T ss_pred cceecCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--H---HHHHHHh---ccc
Confidence 99876543 2334567899999999999889999999999999999999999998644321 1 1111111 111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111111112236788999999999999999999986
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=344.81 Aligned_cols=252 Identities=23% Similarity=0.422 Sum_probs=208.0
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 5789999999999999999988889999999997643 23567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999997643 3578999999999999999999999 9999999999999999999999999999876432
Q ss_pred C-CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 S-SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......++..|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+........+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~--- 229 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRL--- 229 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCCCCTT---
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-----HHHHHHhcCCcCCCCcc---
Confidence 1 11223456788999999998899999999999999999999 89998654321 11122222212111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+.+++.+||+.||++|||++|+++.|++
T Consensus 230 ---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 230 ---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261 (267)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 12357789999999999999999999999863
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=355.66 Aligned_cols=252 Identities=21% Similarity=0.404 Sum_probs=197.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCc----EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
++|++.+.||+|+||+||+|.+ .+++ +||+|++.... .....+.+.+|+.++++++||||+++++++.++.
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 5799999999999999999964 3444 46888875432 2345678999999999999999999999998765
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 789999999999999997653 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
........ .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||+..... .....+. .......
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~---~~~~~~~ 240 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE---KGERLPQ 240 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH---TTCCCCC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHH---cCCCCCC
Confidence 76543322 234456889999999999999999999999999999999 99998755432 1111111 1111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~------~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 241 PPI------CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CTT------BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred Ccc------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111 1235778999999999999999999999885
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=346.20 Aligned_cols=253 Identities=23% Similarity=0.382 Sum_probs=193.6
Q ss_pred HhccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.+.||+|+||.||+|... .+..||+|++.... .....+.+.+|+.++++++||||+++++++. ++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 367999999999999999999653 24579999986542 2234678999999999999999999999985 467
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 899999999999999997543 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 914 FLNPHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 914 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
....... ......+++.|+|||++.+..++.++||||+||++|||++ |..||...... .....+........+
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~~~i~~~~~~~~~ 239 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMP 239 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTCCCCCC
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHHHHHHcCCCCCCC
Confidence 7654322 1233456789999999998899999999999999999997 99998755432 111122111111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 240 ~~------~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 240 PN------CPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp TT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11 1235778899999999999999999999986
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-39 Score=373.53 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=196.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++...... .......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 47899999999999999999954 57999999999765321 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+ . ||+||||||+||+++.++.+||+|||+++..
T Consensus 226 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999997643 58899999999999999999998 7 9999999999999999999999999999875
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+.. ....++..
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~---~i~~-~~~~~p~~-- 371 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFE---LILM-EEIRFPRT-- 371 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH---HHHH-CCCCCCTT--
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHH---HHHh-CCCCCCcc--
Confidence 44444456678999999999999999999999999999999999999998644321 1111 1111 11112211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||++|| +++|+++
T Consensus 372 ----~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 372 ----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ----SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 113577899999999999999 9999875
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=354.75 Aligned_cols=256 Identities=23% Similarity=0.387 Sum_probs=206.5
Q ss_pred hccCccceeecCCCccEEEEEe--------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
++|++.+.||+|+||.||+|+. .+++.||||+++... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 6899999999999999999975 356789999997643 223467889999999999 8999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+.+..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+. ||+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 99999999999999999999976532 23488999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||++........ ......+++.|+|||++.+..++.++||||+||++|||++ |+.||......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 999999999999999987654322 1233456788999999988889999999999999999999 99998654321
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. ...+........+.. ....+.+++.+||+.||.+|||+.|+++.|++
T Consensus 267 ~~---~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 315 (334)
T 2pvf_A 267 EL---FKLLKEGHRMDKPAN------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315 (334)
T ss_dssp HH---HHHHHHTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH---HHHHhcCCCCCCCcc------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11 111222111122111 12357788999999999999999999999863
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=353.74 Aligned_cols=261 Identities=20% Similarity=0.273 Sum_probs=198.7
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED--DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL 79 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEE
Confidence 36799999999999999999965 4699999999866432 22346678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.++++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 80 v~e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 80 VFEYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp EEECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 999999999999887543 488999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh------------
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN------------ 983 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~------------ 983 (1031)
..........+|+.|+|||++.+ ..++.++||||+|+++|+|++|+.||......... ........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 154 GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL-YLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCSCCHHHHHHHHT
T ss_pred CcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhccccccccccccc
Confidence 54444556788999999999876 56799999999999999999999998755432111 10000000
Q ss_pred -hh-cCCCCCCCC--hh----HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 -QN-LDHRLPTPS--RD----VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 -~~-~~~~~~~~~--~~----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .....+... .. .......+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 000111000 00 0112235788999999999999999999985
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=363.85 Aligned_cols=264 Identities=18% Similarity=0.230 Sum_probs=203.8
Q ss_pred HhccCccceeecC--CCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 758 IDDFGEKYCIGKG--RQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.++|++.++||+| +||.||+|+.. +++.||||++...... ....+.+.+|+.++++++||||+++++++.+++..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS--NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC--hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 3679999999999 99999999654 7999999999765432 23467788999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999999997653 23588999999999999999999999 999999999999999999999999999865
Q ss_pred cCCCC-------CCceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 915 LNPHS-------SNWTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 915 ~~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....................
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 42211 11223478899999999987 5789999999999999999999999875443221111100000000
Q ss_pred cCCC---------------------------CC-------CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHR---------------------------LP-------TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~---------------------------~~-------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+.. .+ ............+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0000 00 000000111235788999999999999999999975
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=373.55 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=209.4
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|+. .+|+.||||++.+.... .....+.+.+|+.++++++||||+++++++.+.+..|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 36799999999999999999965 57999999999765432 23456778999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++...
T Consensus 262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999997653 23489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ..+..........++..
T Consensus 338 ~~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~--~~i~~~i~~~~~~~p~~--- 411 (576)
T 2acx_A 338 EG-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR--EEVERLVKEVPEEYSER--- 411 (576)
T ss_dssp TT-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH--HHHHHHHHHCCCCCCTT---
T ss_pred cC-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH--HHHHHHhhcccccCCcc---
Confidence 33 2335568999999999999988999999999999999999999998754432111 11111111122222211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||++|| +++|+++
T Consensus 412 ---~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 412 ---FSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ---CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 123677899999999999999 7888864
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=351.11 Aligned_cols=262 Identities=23% Similarity=0.338 Sum_probs=197.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .+....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 46799999999999999999964 5799999999875332 123456788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||+++++|.+++.... ....+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999997532 234578999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
...........+++.|+|||++.+..++.++||||||+++|||++|+.||............ .......+.... .
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~--~ 261 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK---KIEQCDYPPLPS--D 261 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHH---HHHTTCSCCCCT--T
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHH---HhhcccCCCCcc--c
Confidence 54444444567899999999999989999999999999999999999998654332222221 111111111110 1
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||+.||++|||++|+++.|++
T Consensus 262 ---~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~ 294 (310)
T 2wqm_A 262 ---HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294 (310)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 112357788999999999999999999998863
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=344.22 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=204.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF----VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 46799999999999999999965 467899999987643 2356789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 999999999999987643 488999999999999999999999 99999999999999 788899999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......+|+.|+|||++.+ .++.++||||+|+++|||++|+.||...... . ....+.. .....+
T Consensus 158 ~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~---~~~~~~~---~~~~~~ 227 (277)
T 3f3z_A 158 RFKPG-KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--E---VMLKIRE---GTFTFP 227 (277)
T ss_dssp ECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--H---HHHHHHH---CCCCCC
T ss_pred eccCc-cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--H---HHHHHHh---CCCCCC
Confidence 76543 33455678999999999876 4899999999999999999999998754331 1 1111111 111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..........+.+++.+|++.||++|||+.|+++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111122346788999999999999999999875
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=357.97 Aligned_cols=252 Identities=21% Similarity=0.274 Sum_probs=200.4
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++.+... ...+|++++.++ +||||+++++++.+++..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~ 91 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGKYV 91 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence 457899999999999999999965 4789999999966431 134688888777 799999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-C---ceEEeccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-H---EAHVSDFG 910 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~---~~kl~Dfg 910 (1031)
|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||++..+ + .+||+|||
T Consensus 92 ~lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 99999999999999997653 488999999999999999999999 99999999999998543 3 49999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++..............||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......+...... .
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~~~~~-~ 242 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEILARIGSGKFS-L 242 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHHHHHHHCCCC-C
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHHHHHccCCcc-c
Confidence 99977655444556788999999999988889999999999999999999999987533211 11111222111111 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+ ..........+.+++.+||+.||++|||+.|+++
T Consensus 243 ~--~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 243 S--GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp C--STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred C--ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 0001112235778999999999999999999875
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=358.33 Aligned_cols=265 Identities=17% Similarity=0.218 Sum_probs=199.5
Q ss_pred hccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhh--hh-----hhcHHHHHHHHHHHhcCCCCceeeeeee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLF--DE-----MADQDEFLNEVLALTEIRHRNIIKFHGF 827 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--~~-----~~~~~~~~~Ei~~l~~l~h~niv~l~~~ 827 (1031)
++|.+.+.||+|+||.||+|... ++..||||++...... .+ ......+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999764 5789999998654211 00 1123457789999999999999999999
Q ss_pred Eec----CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-
Q 043316 828 CSN----AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH- 902 (1031)
Q Consensus 828 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 902 (1031)
+.+ ....++||||+ +++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence 987 78899999999 999999998654 589999999999999999999999 999999999999999887
Q ss_pred -ceEEeccccccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh
Q 043316 903 -EAHVSDFGIAKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS 974 (1031)
Q Consensus 903 -~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~ 974 (1031)
.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 999999999987643211 124457899999999999988999999999999999999999998643332222
Q ss_pred hhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
............+........ ......++.+++.+||+.||++|||++||++.|++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 270 VQTAKTNLLDELPQSVLKWAP-SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp HHHHHHHHHHTTTHHHHHHSC-TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred HHHHHHhhcccccHHHHhhcc-ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 222222211111110000000 00112367889999999999999999999999874
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=358.25 Aligned_cols=254 Identities=23% Similarity=0.298 Sum_probs=195.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH---- 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~---- 833 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++..... .+....+.+.+|+.++++++||||+++++++.....
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 5799999999999999999964 6799999999976542 223446788999999999999999999999876543
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||+++++|.++++... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 499999999999999997643 588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .... ...
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~----~~~~----~~~ 236 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVR----EDP 236 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH----HHHH----CCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH----HHhc----CCC
Confidence 7654322 2234568999999999999899999999999999999999999986544321111 1110 111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............+.+++.+||+.||++||++.++++
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 237 IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 1100000112236788999999999999997776654
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=365.39 Aligned_cols=263 Identities=23% Similarity=0.259 Sum_probs=206.6
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS 829 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~ 829 (1031)
+++.....++|++.+.||+|+||+||+|+. .+++.||||++++..... ....+.+.+|+.++..++||||+++++++.
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~-~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK-RGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-HGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 334444568899999999999999999965 579999999997643221 223456889999999999999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
+.+..|+||||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++++||+||
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 9999999999999999999997642 3588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC-ceeeccccCcccccccc-------ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH
Q 043316 910 GIAKFLNPHSSN-WTAFAGTFGYAAPEIAH-------MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 910 g~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~ 981 (1031)
|+++........ ....+||+.|+|||++. +..++.++||||+||++|||++|+.||...... .....+..
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~ 284 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ETYGKIVH 284 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHT
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HHHHHHHh
Confidence 999876543322 23467999999999987 356899999999999999999999998654321 11111111
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCC---CCHHHHHH
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR---PTMKKVCN 1027 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~ 1027 (1031)
.... ...+.... ....++.++|.+||+ +|++| |+++|+++
T Consensus 285 ~~~~--~~~p~~~~---~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 285 YKEH--LSLPLVDE---GVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHH--CCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cccC--cCCCcccc---CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1111 11111000 112367789999999 99998 58999864
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=358.09 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=197.3
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC--CceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH--RNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++| |||+++++++.+++..++
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 56999999999999999999888899999999875432 23346788999999999986 999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 87 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 45789999998653 588899999999999999999999 999999999999997 6889999999998765
Q ss_pred CCCC--CceeeccccCccccccccc-----------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 917 PHSS--NWTAFAGTFGYAAPEIAHM-----------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 917 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........... ....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---~~~~ 235 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH---AIID 235 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH---HHHC
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHH---HHhc
Confidence 4332 2345679999999999865 6788999999999999999999999875433211111 1111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+... ...+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~------~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 236 PNHEIEFPDIP------EKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp TTSCCCCCCCS------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCcccCCcccC------CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 11122222211 125778999999999999999999975
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=349.23 Aligned_cols=259 Identities=20% Similarity=0.309 Sum_probs=204.1
Q ss_pred hccCccceeecCCCccEEEEE-----eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-----LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-- 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-- 831 (1031)
+.|++.+.||+|+||.||+|+ ..+++.||||++.... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 458899999999999999997 3468999999997643 233567899999999999999999999999876
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 66899999999999999996543 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc----------chhhhhh
Q 043316 912 AKFLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN----------FSSFSNM 978 (1031)
Q Consensus 912 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~----------~~~~~~~ 978 (1031)
+........ ......+|..|+|||++.+..++.++||||+|+++|||+||+.|+...... .......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987754432 123456788899999999989999999999999999999999985422111 0011111
Q ss_pred HHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
............+.. ....+.+++.+||+.||.+|||++|+++.|++
T Consensus 253 ~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPN------CPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHHHHTTCCCCCCTT------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCC------CCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 111111111111111 12367789999999999999999999999863
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=347.29 Aligned_cols=255 Identities=17% Similarity=0.198 Sum_probs=204.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++++ +|++++++++++.+....++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS------DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT------TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC------ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 5799999999999999999964 679999999986532 234577899999999 79999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-----eEEecccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-----AHVSDFGI 911 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~ 911 (1031)
||||+ +++|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+
T Consensus 84 v~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 999999998643 3589999999999999999999999 9999999999999988776 99999999
Q ss_pred ccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-hhhhHHHhh
Q 043316 912 AKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-FSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~ 983 (1031)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ....+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK 237 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc
Confidence 987654322 124567899999999999989999999999999999999999998765432111 111111110
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.... .+ .........+.+++.+||+.||++|||+++|++.|+
T Consensus 238 ~~~~--~~---~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 238 QSTP--LR---ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHSC--HH---HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred cCcc--HH---HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 0000 00 000011236788999999999999999999999886
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=347.33 Aligned_cols=257 Identities=24% Similarity=0.403 Sum_probs=193.8
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.++||+|+||+||+|+.. ..||||+++.... .....+.+.+|+.++++++||||+++++++ .....++||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 57999999999999999999763 3599999876432 234567899999999999999999999965 456689999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999997543 4588999999999999999999999 9999999999999999999999999999865432
Q ss_pred C--CCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 919 S--SNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 919 ~--~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
. .......||+.|+|||++. +..++.++||||+|+++|||++|+.||........ ....... ..........
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~--~~~~~~~~~~ 250 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIEMVGR--GSLSPDLSKV 250 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HHHHHHH--TSCCCCTTSS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HHHHhcc--cccCcchhhc
Confidence 2 2234567899999999986 56788899999999999999999999875543211 1111111 1111111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. .....+.+++.+||+.||++|||++|+++.|++
T Consensus 251 ~~---~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 251 RS---NCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285 (289)
T ss_dssp CT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cc---cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 11 112367889999999999999999999999873
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-38 Score=353.35 Aligned_cols=263 Identities=23% Similarity=0.336 Sum_probs=206.9
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhc--CCCCceeeeeeeEec
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE--IRHRNIIKFHGFCSN 830 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~~~~~~ 830 (1031)
......++|.+.+.||+|+||.||+|+. +++.||||++... ..+.+.+|++++.. ++||||+++++++..
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3345567899999999999999999987 6999999998653 24567788888877 789999999999988
Q ss_pred CC----eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhh--------hCCCCCeeeCCCCCCCeee
Q 043316 831 AQ----HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH--------HDCLPPIVHGDISSKNVLL 898 (1031)
Q Consensus 831 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll 898 (1031)
.. ..++||||+++|+|.+++... .+++.+++.++.|++.||+||| +. +|+||||||+||++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 180 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence 76 789999999999999999753 4889999999999999999999 77 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCC----ceeeccccCcccccccccc------CCCccccchhhhHHHHHHHhC-------
Q 043316 899 DSEHEAHVSDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMM------RATEKYDVHSFGVLALEVIKG------- 961 (1031)
Q Consensus 899 ~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltG------- 961 (1031)
+.++.+||+|||++......... .....||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 99999999999999876543321 2345789999999998765 334789999999999999999
Q ss_pred ---CCCCCCcCccchhhhhhHHHhh-hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 962 ---NHPRDYVSTNFSSFSNMITEIN-QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 962 ---~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.||.................. ....+.++.. ....+....+.+++.+||+.||++|||++||++.|++
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 261 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccCccccCcCcccHHHHHHHHHHHHhCCCCccc-ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 6777544332222222222211 1122222211 0112445578899999999999999999999999863
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=356.43 Aligned_cols=257 Identities=23% Similarity=0.405 Sum_probs=206.7
Q ss_pred HhccCccceeecCCCccEEEEEeC-CC-----cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SG-----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~ 830 (1031)
.++|.+.+.||+|+||.||+|... ++ ..||+|++.... .....+.+.+|+.+++++ +||||+++++++.+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 367999999999999999999653 23 489999987643 223467889999999999 89999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCc-----------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAA-----------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
++..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. ||+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence 9999999999999999999975421 23578999999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhh
Q 043316 900 SEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~ 976 (1031)
.++.+||+|||++......... .....+|+.|+|||++.+..++.++||||+||++|||+| |..||........ ..
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~ 277 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FY 277 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HH
Confidence 9999999999999876433221 233456889999999998899999999999999999999 9999875443211 11
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. .........+... ...+.+++.+||+.||.+|||++|+++.|+
T Consensus 278 ~~---~~~~~~~~~~~~~------~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 278 KL---VKDGYQMAQPAFA------PKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp HH---HHHTCCCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HH---HhcCCCCCCCCCC------CHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 11 1111111111111 235778999999999999999999999986
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=346.02 Aligned_cols=253 Identities=23% Similarity=0.357 Sum_probs=204.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 36799999999999999999955 5689999999876543 22345778899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~ 913 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++. +||+|||++.
T Consensus 83 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999998887643 488999999999999999999999 9999999999999987665 9999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .....+. ..... .+..
T Consensus 157 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~---~~~~~-~~~~ 229 (284)
T 3kk8_A 157 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIK---AGAYD-YPSP 229 (284)
T ss_dssp ECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH---HTCCC-CCTT
T ss_pred EcccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHH---hcccc-CCch
Confidence 76533 2334567899999999999989999999999999999999999998644321 1111111 11111 1110
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........+.+++.+||+.||++|||++|+++
T Consensus 230 --~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 230 --EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp --TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00111235778999999999999999999975
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=369.31 Aligned_cols=253 Identities=24% Similarity=0.412 Sum_probs=202.0
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||.||+|....+..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++|
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 36788999999999999999988888889999997643 245689999999999999999999999876 678999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.++++... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 257 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp ECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred ehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999997532 23588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ......++..|+|||++.++.++.++|||||||++|||+| |+.||...... .....+........+..
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~-- 405 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPE-- 405 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTT--
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCC--
Confidence 322 1233456789999999998899999999999999999999 99998654331 11122222111111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+.+++.+||+.||++|||++++++.|+.
T Consensus 406 ----~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~ 437 (452)
T 1fmk_A 406 ----CPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437 (452)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 12357788999999999999999999999874
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=351.74 Aligned_cols=259 Identities=20% Similarity=0.285 Sum_probs=197.8
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
...++|.+.+.||+|+||.||+|.. .+++.||||++..... .+....+.+.+|+.++++++||||+++++++.+++..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-SDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 3457899999999999999999965 4789999999976532 2233457889999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp EEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred EEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 9999999999999999764 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC-CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 915 LNPHS-SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 915 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......+++.|+|||++.+..++.++||||+|+++|||++|+.||...... ... ........ ..
T Consensus 184 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~---~~~~~~~~----~~ 254 (309)
T 2h34_A 184 TTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMG---AHINQAIP----RP 254 (309)
T ss_dssp -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHH---HHHHSCCC----CG
T ss_pred ccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHH---HHhccCCC----Cc
Confidence 64432 2234567899999999999989999999999999999999999998644321 111 11111111 00
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARP-TMKKVCNLLC 1030 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~ 1030 (1031)
..........+.+++.+||+.||++|| +++++++.|+
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 000011122577889999999999999 9999999886
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=346.63 Aligned_cols=252 Identities=25% Similarity=0.350 Sum_probs=198.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR---SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG---CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc---cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 6799999999999999999965 578999999987653 233567899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 838 SEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
|||+++++|.+++.... ....+++..++.++.|++.||+|||+. ||+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999986532 224589999999999999999999999 99999999999999 456789999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......|++.|+|||++. +.++.++||||+|+++|||++|+.||...... ... ..... ........
T Consensus 176 ~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~---~~~~~-~~~~~~~~ 247 (285)
T 3is5_A 176 LFKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQ---QKATY-KEPNYAVE 247 (285)
T ss_dssp C-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHH-CCCCCCC-
T ss_pred ecCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHH---hhhcc-CCcccccc
Confidence 76433 2334567899999999886 46899999999999999999999998754321 111 11111 11111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... ....+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 CRP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp -CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 1235678999999999999999999985
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=346.27 Aligned_cols=253 Identities=23% Similarity=0.421 Sum_probs=209.1
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 467999999999999999999654 58899999986542 346788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999997643 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 917 PHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 917 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... ......+++.|+|||++.+..++.++||||+|+++|+|++ |..||...... ..............+..
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~- 236 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYRMERPEG- 236 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCCCCCTT-
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhccCCCCCCCC-
Confidence 4332 1233456789999999998899999999999999999999 99998654432 11122222222222211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+|++.||++|||++|+++.|+
T Consensus 237 -----~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 237 -----CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp -----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 1235778999999999999999999999886
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=355.57 Aligned_cols=258 Identities=20% Similarity=0.337 Sum_probs=207.4
Q ss_pred HHhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 830 (1031)
..++|++.+.||+|+||.||+|... +++.||||++.... .......+.+|+.++++++||||+++++++.+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 4578999999999999999999553 47889999997543 22345678999999999999999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCc-------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAA-------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCe
Confidence 9999999999999999999975321 13568899999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHH
Q 043316 904 AHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 980 (1031)
+||+|||++........ ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... ....
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~ 251 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-----QVLR 251 (322)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----HHHH
T ss_pred EEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-----HHHH
Confidence 99999999986543221 1223456889999999998899999999999999999999 88997654321 1111
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..........+ .. ....+.+++.+||+.||.+|||+.|+++.|++
T Consensus 252 ~~~~~~~~~~~---~~---~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 252 FVMEGGLLDKP---DN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp HHHTTCCCCCC---TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HHHcCCcCCCC---CC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 11111111111 11 12357788999999999999999999999864
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=354.54 Aligned_cols=262 Identities=19% Similarity=0.262 Sum_probs=194.4
Q ss_pred HHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
...++|++.+.||+|+||+||+|. ..+++.||||+++.... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 345789999999999999999995 45799999999976532 223456778999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-----CCCceEEecc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-----SEHEAHVSDF 909 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-----~~~~~kl~Df 909 (1031)
++||||++ |+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++ .++.+||+||
T Consensus 109 ~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 109 HLIFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEEEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEEEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 99999998 59999997654 488999999999999999999999 999999999999994 4556999999
Q ss_pred ccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC-
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD- 987 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~- 987 (1031)
|+++.............+|+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..............+
T Consensus 182 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 260 (329)
T 3gbz_A 182 GLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDT 260 (329)
T ss_dssp THHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTT
T ss_pred CCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchh
Confidence 9998876554455666789999999998874 4899999999999999999999998654332 111111111100000
Q ss_pred ------------CCCCCCChhHHH------HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 ------------HRLPTPSRDVMD------KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ------------~~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+........ ...++.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 001100000011 1236789999999999999999999986
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-38 Score=365.44 Aligned_cols=257 Identities=20% Similarity=0.297 Sum_probs=195.3
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA----- 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 831 (1031)
.++|++.+.||+|+||+||+|. ..+++.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 3679999999999999999995 4579999999997642 2234567889999999999999999999999654
Q ss_pred -CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 832 -QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 832 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
...|+||||++++ +.+.+.. .+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 4579999999864 5555543 378899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh--------
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI-------- 982 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~-------- 982 (1031)
+++..... ...+..+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.......
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~~~~~ 287 (464)
T 3ttj_A 210 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFM 287 (464)
T ss_dssp CC-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred eeeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence 99876532 3345678999999999999999999999999999999999999998754421 1111111000
Q ss_pred -------hhhcC--CC--------------CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 -------NQNLD--HR--------------LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 -------~~~~~--~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..... +. .+...........++.+++.+||+.||++|||++|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 00 01111111122456889999999999999999999985
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=359.54 Aligned_cols=262 Identities=18% Similarity=0.267 Sum_probs=199.5
Q ss_pred HhccCccceeecCCCccEEEEEeCC------CcEEEEEEccchhhhh--h-----hhcHHHHHHHHHHHhcCCCCceeee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPS------GIIFAVKKFNSQLLFD--E-----MADQDEFLNEVLALTEIRHRNIIKF 824 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~--~-----~~~~~~~~~Ei~~l~~l~h~niv~l 824 (1031)
.++|.+.+.||+|+||.||+|.... ++.||||++....... + ......+.+|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3579999999999999999997654 4789999986543110 0 1112345567777888999999999
Q ss_pred eeeEecC----CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-
Q 043316 825 HGFCSNA----QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD- 899 (1031)
Q Consensus 825 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~- 899 (1031)
++++... ...++||||+ +++|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9998764 4589999999 999999997642 4589999999999999999999999 999999999999999
Q ss_pred -CCCceEEeccccccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 900 -SEHEAHVSDFGIAKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 900 -~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
.++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999987643221 113455999999999999989999999999999999999999998754332
Q ss_pred chhhhhhHHHh----hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 972 FSSFSNMITEI----NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 972 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
........... ....+..++.. ....++.+++..||+.||++||++++|++.|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAA-----NAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTT-----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccc-----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 11111111111 11111110000 01236788899999999999999999999886
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-38 Score=342.79 Aligned_cols=251 Identities=22% Similarity=0.413 Sum_probs=205.3
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-----ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 6799999999999999999988888899999986543 246788999999999999999999999874 4589999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ...+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+......
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp ECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred ecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999999997642 23588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......++..|+|||++.++.++.++||||+|+++|||++ |+.||...... .....+........+..
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~--- 234 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQNLERGYRMVRPDN--- 234 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTT---
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHHHHhcccCCCCccc---
Confidence 21 1223456788999999998889999999999999999999 89998654321 11122222111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+|++.||++|||+.++++.|+
T Consensus 235 ---~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 235 ---CPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---ccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 1236778999999999999999999999886
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=346.76 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=205.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe--cCCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS--NAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~--~~~~~ 834 (1031)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+.++++++||||+++++++. ..+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 46899999999999999999965 4799999999976542 2234678999999999999999999999874 46788
Q ss_pred EEEEEeccCCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCC-----eeeCCCCCCCeeeCCCCceEEec
Q 043316 835 FIVSEYLDRGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPP-----IVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
++||||+++++|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 999999999999999976432 23489999999999999999999999 7 99999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
||.+..............|++.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~i~~~~~~ 234 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-----ELAGKIREGKFR 234 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHTCCC
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-----HHHHHHhhcccc
Confidence 999987654333334457899999999999888999999999999999999999998754321 111222222222
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
..+.. ....+.+++.+||+.||++|||++|+++.+
T Consensus 235 ~~~~~------~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 235 RIPYR------YSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp CCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred cCCcc------cCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 22211 123677899999999999999999999765
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=340.25 Aligned_cols=253 Identities=24% Similarity=0.344 Sum_probs=205.5
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEE
Confidence 357899999999999999999965 4799999999865432 234577899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+...
T Consensus 82 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EEEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 9999999999999997643 488999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC--CCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 916 NPHS--SNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 916 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.... .......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||+........+..... . .....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~-~~~~~- 229 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE----K-KTYLN- 229 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT----T-CTTST-
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh----c-ccccC-
Confidence 4322 22345678999999999987665 78999999999999999999998765443222211111 0 01111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ......+.+++.+||+.||++|||++|+++
T Consensus 230 ~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 PW---KKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TG---GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ch---hhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 10 112235778999999999999999999975
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=345.94 Aligned_cols=247 Identities=21% Similarity=0.376 Sum_probs=199.8
Q ss_pred hccCccceeecCCCccEEEEEeC-CC-------cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SG-------IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN 830 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 830 (1031)
++|.+.+.||+|+||+||+|... ++ ..||+|++.... ....+.+.+|+.++++++||||+++++++.+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 67999999999999999999543 33 579999986543 3456789999999999999999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE------- 903 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~------- 903 (1031)
++..++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999998653 3488999999999999999999999 9999999999999998887
Q ss_pred -eEEeccccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCC-CCCcCccchhhhhhHH
Q 043316 904 -AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHP-RDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 904 -~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P-~~~~~~~~~~~~~~~~ 980 (1031)
+||+|||.+..... .....+++.|+|||++.+ ..++.++||||+||++|||++|..| |...... . ...
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--~---~~~ 229 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ--R---KLQ 229 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--H---HHH
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH--H---HHH
Confidence 99999999976532 234567899999999987 6789999999999999999996554 3322211 1 111
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. . .....+... ...+.+++.+||+.||++|||++|+++.|++
T Consensus 230 ~~-~-~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 230 FY-E-DRHQLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp HH-H-TTCCCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred Hh-h-ccCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 11 1 111111111 1246788999999999999999999999874
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=355.98 Aligned_cols=246 Identities=21% Similarity=0.313 Sum_probs=203.6
Q ss_pred HHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhh----hhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDE----MADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~----~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
..++|++.+.||+|+||.||+|. ..+++.||||++........ ....+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45789999999999999999995 46789999999976542211 11334577899999999999999999999999
Q ss_pred CeeEEEEEeccCC-CchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 832 QHSFIVSEYLDRG-SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 832 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999997654 488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
++...... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ..... .
T Consensus 176 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------~~~~~--~ 242 (335)
T 3dls_A 176 SAAYLERG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------VEAAI--H 242 (335)
T ss_dssp TCEECCTT-CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------TTTCC--C
T ss_pred cceECCCC-CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------Hhhcc--C
Confidence 99877543 33455779999999999988776 88999999999999999999998643221 00000 0
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+.. ....+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~------~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 243 PPYL------VSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp CSSC------CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcc------cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 1235778999999999999999999986
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=360.38 Aligned_cols=250 Identities=22% Similarity=0.336 Sum_probs=198.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC--CCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR--HRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~~~~l 836 (1031)
.+|.+.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++..++..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 46999999999999999999888899999999876432 2345678999999999996 5999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++.+.
T Consensus 134 v~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 999 56789999998653 578889999999999999999999 999999999999995 6899999999998765
Q ss_pred CCCC--CceeeccccCccccccccc-----------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 917 PHSS--NWTAFAGTFGYAAPEIAHM-----------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 917 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ ...
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~---~~~ 282 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA---IID 282 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH---HHC
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH---HhC
Confidence 4322 2345679999999999865 36889999999999999999999998754332111111 111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+... ...+.+++.+||+.||++|||+.|+++
T Consensus 283 ~~~~~~~~~~~------~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 283 PNHEIEFPDIP------EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp TTSCCCCCCCS------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCCCCccc------hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 11111222211 235778999999999999999999975
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-38 Score=345.76 Aligned_cols=250 Identities=22% Similarity=0.372 Sum_probs=207.2
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|... +++.||+|++...... +....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 67999999999999999999654 6889999998765422 234567889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 9999999999998754 3588999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........|++.|+|||++.+..++.++||||+|+++|||++|+.||+..... ......... ....+..
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~-~~~~~~~---- 237 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLRIKKN-EYSIPKH---- 237 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHTT-CCCCCTT----
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhhc-cCCCccc----
Confidence 444455667899999999999888999999999999999999999998754321 111111111 1111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 238 --~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 238 --INPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --cCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1135778899999999999999999875
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=353.10 Aligned_cols=252 Identities=23% Similarity=0.407 Sum_probs=198.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcE----EEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGII----FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
++|++.+.||+|+||+||+|.. .+++. ||+|++..... ....+.+.+|+.++++++||||+++++++. ++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG---RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS---CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCc
Confidence 5788999999999999999965 34543 78887754321 223456778999999999999999999986 456
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred cEEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 899999999999999997652 3588899999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... ......++..|+|||++.+..++.++||||+||++|||+| |+.||...... .....+. .......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~---~~~~~~~ 238 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLE---KGERLAQ 238 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHH---TTCBCCC
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHH---cCCCCCC
Confidence 8754332 2345567889999999999899999999999999999999 99998754432 1111111 1111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. ....+.+++.+||+.||.+|||++|+++.|+
T Consensus 239 ~~~------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 239 PQI------CTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CTT------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCc------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 1124667899999999999999999999886
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=343.17 Aligned_cols=254 Identities=23% Similarity=0.336 Sum_probs=203.3
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
++|++.+.||+|+||.||+|... +++.||||+++....... ....+.+.+|+.++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 57999999999999999999664 799999999876543221 124678999999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~ 911 (1031)
+||||+++++|.+++... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++ .+||+|||.
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999999754 3588999999999999999999999 999999999999999877 799999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+....... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...... . ....+.. ....
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~---~~~~~~~---~~~~ 229 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--E---TLTNISA---VNYD 229 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHT---TCCC
T ss_pred ceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--H---HHHHhHh---cccC
Confidence 98764332 234567899999999999889999999999999999999999998654321 1 1111111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 111111112346788999999999999999999986
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=351.80 Aligned_cols=262 Identities=22% Similarity=0.339 Sum_probs=208.8
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeee
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFH 825 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~ 825 (1031)
+.....++|++.+.||+|+||.||+|+. .+++.||||+++.... ....+.+.+|+.+++++ +||||++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC---cHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3333457899999999999999999963 3568999999976432 23456789999999999 699999999
Q ss_pred eeEecC-CeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCC
Q 043316 826 GFCSNA-QHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDI 891 (1031)
Q Consensus 826 ~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 891 (1031)
+++... +..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+. ||+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 998765 458999999999999999976542 12278899999999999999999999 9999999
Q ss_pred CCCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCc
Q 043316 892 SSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYV 968 (1031)
Q Consensus 892 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~ 968 (1031)
||+||+++.++.+||+|||+++........ .....+|+.|+|||++.+..++.++||||+||++|||+| |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999999876543322 234567889999999999899999999999999999998 99998755
Q ss_pred CccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 969 STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..... .. ...........+.. ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 255 ~~~~~-~~---~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 255 KIDEE-FC---RRLKEGTRMRAPDY------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp CCSHH-HH---HHHHHTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred chhHH-HH---HHhccCccCCCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 43211 11 11111111111111 1235778899999999999999999999886
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=353.67 Aligned_cols=259 Identities=17% Similarity=0.242 Sum_probs=193.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||+||+|.. .+++.||||++...... .....+.+|+.++++++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 5799999999999999999965 47899999998654321 1122455799999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++ |+|.+++.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 79 ~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ecccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 99997 58888887643 3588899999999999999999999 999999999999999999999999999987655
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC---
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP--- 993 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 993 (1031)
.........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ................++..
T Consensus 153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGC
T ss_pred CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcc
Confidence 4444556678999999999876 568999999999999999999999987544311 11111111111011111000
Q ss_pred ------------ChhH----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 ------------SRDV----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ------------~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... ......+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000 011235789999999999999999999975
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=349.62 Aligned_cols=246 Identities=22% Similarity=0.253 Sum_probs=193.1
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.++||+|+||+||+|... +++.||||++..... .......+.+|+..+.++ +||||+++++++.+++..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 67999999999999999999664 799999999865432 123344556666666555 89999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+ +++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 668988887543 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. .......||+.|+|||++.+ .++.++||||+||++|||++|..|+..... ...+.. ...+ ...
T Consensus 209 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------~~~~~~---~~~~--~~~ 273 (311)
T 3p1a_A 209 TA-GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------WQQLRQ---GYLP--PEF 273 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------HHHHTT---TCCC--HHH
T ss_pred cC-CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHhc---cCCC--ccc
Confidence 33 23345668999999999876 789999999999999999999776432211 111111 1110 011
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++.+||+.||++|||++|+++
T Consensus 274 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 274 TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1112346888999999999999999999986
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=352.23 Aligned_cols=251 Identities=22% Similarity=0.365 Sum_probs=207.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 36799999999999999999965 46889999998765322 23456788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 119 v~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp EECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999998754 3588999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........|++.|+|||++.+..++.++||||+|+++|||++|+.||...... . ....+... ...++..
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~---~~~~~~~~-~~~~~~~--- 263 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--E---TYLRIKKN-EYSIPKH--- 263 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHHT-CCCCCTT---
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--H---HHHHHhcC-CCCCCcc---
Confidence 4444455677899999999999888999999999999999999999998654321 1 11111111 1111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 264 ---~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 264 ---INPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1125678899999999999999999875
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=343.68 Aligned_cols=248 Identities=26% Similarity=0.397 Sum_probs=207.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|++.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 5689999999999999999954 5799999999876432 23467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 99 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999999999753 488999999999999999999999 999999999999999999999999999987755
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........|++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.....+..+..
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~---- 242 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLFLIPKNNPPTLEGN---- 242 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCCSS----
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHHHhhcCCCCCCccc----
Confidence 444445667899999999999989999999999999999999999998654321 11111111122222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||+.|+++
T Consensus 243 --~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 243 --YSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp --CCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --cCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1235778999999999999999999975
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=362.64 Aligned_cols=256 Identities=23% Similarity=0.284 Sum_probs=193.7
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh----hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD----EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
..++|.+.+.||+|+||+||+|.. .+++.||||++....... +......+.+|+.++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 457899999999999999999954 578999999997654221 11223458899999999999999999999865
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEEec
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSD 908 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~D 908 (1031)
+..++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 45799999999999999987653 588999999999999999999999 999999999999997554 599999
Q ss_pred cccccccCCCCCCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
||+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ....+. .
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i~---~- 359 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQIT---S- 359 (419)
T ss_dssp SSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHHH---T-
T ss_pred cccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHHh---c-
Confidence 9999876532 33455779999999999853 5678899999999999999999999875433211 111111 1
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.........+.+++.+||+.||++|||++|+++
T Consensus 360 --~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 360 --GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp --TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1111111111122346788999999999999999999986
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-38 Score=347.74 Aligned_cols=264 Identities=22% Similarity=0.279 Sum_probs=199.8
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh-hhhcHHHHHHHHHHHhcC---CCCceeeeeeeEecC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEI---RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~~~ 831 (1031)
..++|++.+.||+|+||+||+|+. .+++.||||++....... .......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999975 579999999986533211 112234566777777666 499999999999775
Q ss_pred C-----eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 832 Q-----HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 832 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
. ..++||||++ ++|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 5 5799999997 599999976542 3489999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPP 239 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCCC
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC
Confidence 999999876533 2345567899999999999999999999999999999999999998654432 11111111111100
Q ss_pred CCCCC---------------CCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 DHRLP---------------TPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ~~~~~---------------~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...++ ..... ..+....+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00000 00000 0011236788999999999999999999985
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-38 Score=351.31 Aligned_cols=257 Identities=24% Similarity=0.348 Sum_probs=206.1
Q ss_pred hccCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe--cC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS--NA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~--~~ 831 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++. +.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 6799999999999999999973 468899999987643 234567899999999999999999999986 45
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 67899999999999999997643 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch----------hhhhh
Q 043316 912 AKFLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS----------SFSNM 978 (1031)
Q Consensus 912 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~----------~~~~~ 978 (1031)
+........ ......+|..|+|||++.+..++.++||||+||++|+|++|+.||........ .....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 987654332 12334578889999999998899999999999999999999999754332110 01111
Q ss_pred HHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
............+. .....+.+++.+||+.||++|||++|+++.|+
T Consensus 254 ~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 254 LELLEEGQRLPAPP------ACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHTTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcccCCCCCC------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111111111 11235778999999999999999999999886
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=354.26 Aligned_cols=265 Identities=20% Similarity=0.240 Sum_probs=199.0
Q ss_pred HHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhh-hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDE-MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
...++|++.+.||+|+||.||+|... +++.||||++........ ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999664 689999999975432211 1123467899999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++ +|.+++.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999986 8888887643 3578899999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC-
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP- 991 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~- 991 (1031)
.............+|+.|+|||++.+. .++.++||||+||++|||++|..||...... .................++
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSS
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhh
Confidence 876554455667889999999998764 4789999999999999999999997654331 1111111111111110000
Q ss_pred --------------CCCh--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 --------------TPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 --------------~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+. ........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 00111246889999999999999999999986
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=361.92 Aligned_cols=204 Identities=25% Similarity=0.406 Sum_probs=165.2
Q ss_pred HHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCC-
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQ- 832 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~- 832 (1031)
...++|++.+.||+|+||.||+|. ..+++.||||++.... ......+.+.+|+.+++++. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 346789999999999999999995 4579999999986542 22345677889999999997 999999999997544
Q ss_pred -eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 -HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..|+||||++ ++|.++++.. .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 7899999997 5899888753 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC---------------------CCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 912 AKFLNPH---------------------SSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 912 a~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
|+.+... ....+..+||++|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9865321 112344679999999999876 578999999999999999999999987544
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=346.88 Aligned_cols=254 Identities=23% Similarity=0.347 Sum_probs=202.3
Q ss_pred cCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--CCe
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--AQH 833 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~~ 833 (1031)
|++.+.||+|+||+||+|.+ .+++.||||+++... .....+.+.+|++++++++||||+++++++.+ ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 48999999999999988854 268899999997643 23346789999999999999999999999987 467
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++... .+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 89999999999999999764 388999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh----------hhhhHH
Q 043316 914 FLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS----------FSNMIT 980 (1031)
Q Consensus 914 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~----------~~~~~~ 980 (1031)
........ .....++..|+|||++.+..++.++||||+||++|||+||+.||......... ......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 87543321 23455788899999999988999999999999999999999997643321100 001111
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..........+. .....+.+++.+||+.||++|||++|+++.|+
T Consensus 263 ~~~~~~~~~~~~------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 263 LLERGERLPRPD------KCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHHTTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcccCCCCCc------cccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111111111111 11236788999999999999999999999886
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=367.34 Aligned_cols=304 Identities=23% Similarity=0.197 Sum_probs=151.7
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 35666666666666555555666666666666666666555555555555555555555555222223445555555555
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 260 (1031)
++|.+++..|..|.++++|++|++++|.+++..|.. |.++++|+.|+|++|++++.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------------------------~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRA------------------------FSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTS------------------------STTCTTCCEEEEESCCCSSC
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhh------------------------ccCCCCCCEEECCCCcCccc
Confidence 555555444444555555555555555444444444 44444444444444444444
Q ss_pred CCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccc
Q 043316 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340 (1031)
Q Consensus 261 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 340 (1031)
.+..|.++++|+.|+|++|++.+..+..|..+++|+.|++++|.+.+.+|.......+|++|++++|++++..+..+..+
T Consensus 168 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 247 (477)
T 2id5_A 168 PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL 247 (477)
T ss_dssp CHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTC
T ss_pred ChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCc
Confidence 44444445555555555555544444445555555555555554444333333322333333333333332222344445
Q ss_pred ccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceec
Q 043316 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420 (1031)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 420 (1031)
++|++|+|++|.+++..+..|..+++|+.|+|++|++++..|..|.++++ |++|++
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~------------------------L~~L~L 303 (477)
T 2id5_A 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY------------------------LRVLNV 303 (477)
T ss_dssp TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTT------------------------CCEEEC
T ss_pred cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCccc------------------------CCEEEC
Confidence 55555555555555444444444555555555555544444444444444 444444
Q ss_pred cccccccccccccCCCCCCCeeccccccccCc
Q 043316 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452 (1031)
Q Consensus 421 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 452 (1031)
++|+++++.+..|..+++|+.|+|++|++.+.
T Consensus 304 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 304 SGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred CCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 44444444444455555555566666665544
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=348.42 Aligned_cols=254 Identities=27% Similarity=0.473 Sum_probs=198.5
Q ss_pred hccCccceeecCCCccEEEEEeCC-----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS-----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.+|+..+.||+|+||.||+|.... +..||||+++... .......+.+|+.++++++||||+++++++.+.+.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 467788999999999999996532 3469999987543 22345678999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 999999999999999997642 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 914 FLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 914 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
........ .....+++.|+|||++.+..++.++||||+||++|||++ |+.||...... .....+.......
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~~~~~~~~~~ 270 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVMKAINDGFRLP 270 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHCCCcCC
Confidence 76543221 123345788999999998899999999999999999999 99998644321 1112221111111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.+. .....+.+++.+||+.||++||++.|+++.|++
T Consensus 271 ~~~------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 306 (333)
T 1mqb_A 271 TPM------DCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306 (333)
T ss_dssp CCT------TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred Ccc------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 112357788999999999999999999998863
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=356.15 Aligned_cols=253 Identities=25% Similarity=0.381 Sum_probs=191.8
Q ss_pred hccCccceeecCCCccEEEEEeC--C--CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe-cCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--S--GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS-NAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~-~~~~ 833 (1031)
..|...+.||+|+||.||+|... + +..||||.++... +....+.+.+|+.++++++||||+++++++. .++.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS---CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCC
Confidence 34677889999999999999653 2 2468999986532 2345678999999999999999999999875 4568
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++|+|.++++... ..+++.++..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 899999999999999997643 3578899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC----CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 914 FLNPHSS----NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 914 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
....... ......+|+.|+|||++.+..++.++|||||||++|||+| |..||....... .... .......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~---~~~~~~~ 315 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVY---LLQGRRL 315 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHH---HHTTCCC
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHH---HHcCCCC
Confidence 6643221 1234456789999999999999999999999999999999 677776543321 1111 1111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 316 ~~p~~------~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 316 LQPEY------CPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 1235778899999999999999999999886
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=342.77 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=199.7
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|.....||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 355566899999999999964 578999999986542 234677899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++........+++..+..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||++.....
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999998764444567889999999999999999999 9999999999999987 89999999999987654
Q ss_pred CCCCceeeccccCccccccccccC--CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMR--ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.........|++.|+|||++.+.. ++.++||||+|+++|||++|+.||........... ........+..+..
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~-- 250 (295)
T 2clq_A 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKVHPEIPES-- 250 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH---HHHHHCCCCCCCTT--
T ss_pred CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH---hhcccccccccccc--
Confidence 333344567899999999987654 78999999999999999999999864433211111 11111122222211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||+.|+++
T Consensus 251 ----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 251 ----MSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----SCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1235778899999999999999999975
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-38 Score=349.01 Aligned_cols=256 Identities=20% Similarity=0.310 Sum_probs=196.8
Q ss_pred hccCcc-ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeE
Q 043316 759 DDFGEK-YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 759 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 835 (1031)
+.|.+. +.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+++..+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 467774 7899999999999964 579999999986542 23467889999999885 7999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEeccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIA 912 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a 912 (1031)
+||||+++++|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999997643 488899999999999999999999 9999999999999998776 999999999
Q ss_pred cccCCCCC-------CceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhh-----
Q 043316 913 KFLNPHSS-------NWTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF----- 975 (1031)
Q Consensus 913 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~----- 975 (1031)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 86542211 1234568999999999875 568899999999999999999999987554321111
Q ss_pred -----hhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 976 -----SNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 976 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.. .....+..........+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 242 CPACQNMLFESIQE---GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CHHHHHHHHHHHHH---CCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhHHHHHHHHHhc---cCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 001111111 1111111111112346789999999999999999999986
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=353.84 Aligned_cols=248 Identities=26% Similarity=0.378 Sum_probs=199.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|+..+.||+|+||+||+|+. .+++.||||++..... ......+.+.+|++++++++||||+++++++.+++..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 5689999999999999999964 6799999999865432 1223457789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++ |++.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 133 ~e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 67888775432 3588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
. ....||+.|+|||++. ++.++.++|||||||++|||++|+.||....... ....+.....+....
T Consensus 207 ~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~-- 275 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNESPALQS-- 275 (348)
T ss_dssp B----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCCCCCC--
T ss_pred C----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhcCCCCCCC--
Confidence 2 3457899999999984 4678999999999999999999999976443211 111111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 276 ~~---~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 276 GH---WSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC---CCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11 1235678899999999999999999875
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=340.55 Aligned_cols=249 Identities=26% Similarity=0.395 Sum_probs=205.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 46899999999999999999965 46889999998764422 23346788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999999997643 488999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......|++.|+|||++.+..++.++||||+|+++|||++|+.||+..... ... ..+.. ....++..
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~---~~~~~-~~~~~~~~--- 234 (284)
T 2vgo_A 166 SL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETH---RRIVN-VDLKFPPF--- 234 (284)
T ss_dssp SS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHH---HHHHT-TCCCCCTT---
T ss_pred cc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHH---HHHhc-cccCCCCc---
Confidence 32 234567899999999999988999999999999999999999998754321 111 11111 11122211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+|++.||.+|||++|+++
T Consensus 235 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 235 ---LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1235678999999999999999999975
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=353.58 Aligned_cols=256 Identities=23% Similarity=0.260 Sum_probs=201.7
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-----CCceeeeeeeEec
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-----HRNIIKFHGFCSN 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----h~niv~l~~~~~~ 830 (1031)
..++|.+.++||+|+||+||+|+. .+++.||||+++... ...+.+.+|+.++++++ ||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-----KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-----HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-----hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 347899999999999999999965 578999999986532 23556778999998886 9999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC----------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---------- 900 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---------- 900 (1031)
.+..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||+. ||+||||||+||+++.
T Consensus 108 ~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~ 182 (360)
T 3llt_A 108 YDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITV 182 (360)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred CCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccch
Confidence 99999999999 8999999986542 3588999999999999999999999 9999999999999975
Q ss_pred ---------------CCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCC
Q 043316 901 ---------------EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPR 965 (1031)
Q Consensus 901 ---------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~ 965 (1031)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp ECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred hcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 788999999999875432 24567899999999999999999999999999999999999998
Q ss_pred CCcCccchhhhhhHHHhhhhc----------------------CCCCCCCChhHH--H------------HHHHHHHHHH
Q 043316 966 DYVSTNFSSFSNMITEINQNL----------------------DHRLPTPSRDVM--D------------KLMSIMEVAI 1009 (1031)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~--~------------~~~~l~~li~ 1009 (1031)
...... .....+....... ...++....... . ....+.+++.
T Consensus 260 ~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 337 (360)
T 3llt_A 260 RTHEHM--EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY 337 (360)
T ss_dssp CCSSHH--HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHH
T ss_pred CCCcHH--HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHH
Confidence 654321 1111111100000 000111100000 0 0135779999
Q ss_pred hhccCCCCCCCCHHHHHH
Q 043316 1010 LCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1010 ~cl~~dP~~Rps~~evl~ 1027 (1031)
+||+.||++|||++|+++
T Consensus 338 ~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 338 SILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHCCSSGGGSCCHHHHTT
T ss_pred HHhcCChhhCCCHHHHhc
Confidence 999999999999999975
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=345.66 Aligned_cols=259 Identities=23% Similarity=0.342 Sum_probs=196.0
Q ss_pred HHhccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
..++|.+.+.||+|+||.||+|... +++.||||+++.... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 3478999999999999999999543 345899999876432 2234677899999999999999999999997754
Q ss_pred -----eeEEEEEeccCCCchhhcccC---CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 833 -----HSFIVSEYLDRGSLTTILKDD---AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 833 -----~~~lv~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
..++||||+++++|.+++... .....+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 359999999999999998532 2234689999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHH
Q 043316 905 HVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~ 981 (1031)
||+|||++........ ......+++.|+|||.+.+..++.++||||+|+++|||++ |..||...... . ....
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~---~~~~ 261 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--E---MYDY 261 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G---HHHH
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--H---HHHH
Confidence 9999999987643321 1234456889999999999899999999999999999999 88897654432 1 1111
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.........+. .....+.+++.+||+.||++|||+.|+++.|++
T Consensus 262 ~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 262 LLHGHRLKQPE------DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp HHTTCCCCCBT------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHcCCCCCCCc------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11111111111 112367889999999999999999999999863
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=340.33 Aligned_cols=252 Identities=25% Similarity=0.367 Sum_probs=203.5
Q ss_pred hccCccc-eeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKY-CIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|.+.+ .||+|+||.||+|... +++.||||+++... .....+.+.+|++++++++||||+++++++ ..+..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCc
Confidence 4566665 8999999999999643 67889999997642 234567899999999999999999999999 45568
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 99999999999999997542 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... .....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... . ....+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~---~~~~i~~~~~~~~ 234 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--E---VMAFIEQGKRMEC 234 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--H---HHHHHHTTCCCCC
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--H---HHHHHhcCCcCCC
Confidence 7543321 123346789999999988889999999999999999998 99998654431 1 1112222111222
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. ....+.+++.+||+.||++||++.|+++.|+
T Consensus 235 ~~~------~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 235 PPE------CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CTT------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCC------cCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 211 1236778999999999999999999999886
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-38 Score=341.16 Aligned_cols=248 Identities=26% Similarity=0.416 Sum_probs=196.5
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-CeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-QHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+. +++.||||+++... ..+.+.+|+.++++++||||+++++++.+. +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 46899999999999999999987 58899999986532 457789999999999999999999997554 57899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 999999999999997643 23478899999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. .....+++.|+|||++.+..++.++||||+|+++|||+| |+.||...... .....+........+..
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~-- 238 (278)
T 1byg_A 169 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDG-- 238 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHTTTCCCCCCTT--
T ss_pred cc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhcCCCCCCccc--
Confidence 32 233457889999999998899999999999999999998 99998754331 11122222212222211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||+.|+++.|+
T Consensus 239 ----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 239 ----CPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 1236778899999999999999999999986
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=341.60 Aligned_cols=253 Identities=25% Similarity=0.357 Sum_probs=201.4
Q ss_pred HhccCccc-eeecCCCccEEEEEe---CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKY-CIGKGRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|.+.+ .||+|+||.||+|.. .+++.||||+++... .+....+.+.+|+.++++++||||+++++++ ..+.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 35788887 999999999999943 347899999997653 2233467899999999999999999999999 5667
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 899999999999999998643 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 914 FLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 914 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... . ....+.......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~---~~~~~~~~~~~~ 240 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--E---VTAMLEKGERMG 240 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--H---HHHHHHTTCCCC
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--H---HHHHHHcCCCCC
Confidence 76543322 122345788999999998889999999999999999999 99998754431 1 111111111112
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+. .....+.+++.+||+.||++|||+.|+++.|+
T Consensus 241 ~~~------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 241 CPA------GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCT------TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 211 11236778999999999999999999999986
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=354.24 Aligned_cols=261 Identities=20% Similarity=0.289 Sum_probs=199.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD--DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC--chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 46899999999999999999965 4699999999865432 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.++..... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 102 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 999999999988876543 488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh-------------
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI------------- 982 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~------------- 982 (1031)
..........+++.|+|||++.+. .++.++||||+||++|||++|+.||......... .......
T Consensus 176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 254 (331)
T 4aaa_A 176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL-YHIMMCLGNLIPRHQELFNK 254 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCSCCHHHHHHHHH
T ss_pred CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH-HHHHHHhCCCChhhhhHhhh
Confidence 544445566789999999998875 6899999999999999999999998755432111 1110000
Q ss_pred ----hhhcCCCCCCCCh---hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 ----NQNLDHRLPTPSR---DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ----~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+....... ........+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000001100000 00111346889999999999999999999875
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=344.31 Aligned_cols=253 Identities=25% Similarity=0.400 Sum_probs=198.7
Q ss_pred hccCccceeecCCCccEEEEEeCC----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeE-ecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC-SNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~-~~~~~ 833 (1031)
.+|.+.+.||+|+||.||+|...+ ...||+|++.... .....+.+.+|+.++++++||||+++++++ ..++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC---CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 468888999999999999996532 2368999987532 234567899999999999999999999986 45678
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++|+|.++++... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 899999999999999997643 3578899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC----CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 914 FLNPHS----SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 914 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
...... .......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...... ... .........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~---~~~~~~~~~ 251 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DIT---VYLLQGRRL 251 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THH---HHHHTTCCC
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHH---HHHhcCCCC
Confidence 764322 12234567889999999999899999999999999999999 55555443321 111 111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..+... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 252 ~~~~~~------~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 252 LQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCccC------CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 125778899999999999999999999986
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-38 Score=349.19 Aligned_cols=253 Identities=21% Similarity=0.395 Sum_probs=196.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcE----EEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGII----FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
++|++.+.||+|+||.||+|.. .+++. ||+|.+.... .....+.+.+|+.++++++||||+++++++.++.
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 5799999999999999999964 44543 5777765432 2345778999999999999999999999998765
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 789999999999999997653 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||+..... .... .+........
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~---~~~~~~~~~~ 240 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS---ILEKGERLPQ 240 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH---HHHTTCCCCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHH---HHHcCCCCCC
Confidence 7644322 2233456788999999999999999999999999999999 99998755432 1111 1111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.. ....+.+++.+||+.||.+|||++|+++.|++
T Consensus 241 ~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 275 (327)
T 3lzb_A 241 PPI------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 275 (327)
T ss_dssp CTT------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred Ccc------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 111 12257789999999999999999999998863
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=343.15 Aligned_cols=254 Identities=24% Similarity=0.337 Sum_probs=199.5
Q ss_pred ccCccceeecCCCccEEEEEeC-CC---cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee-
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS- 834 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~- 834 (1031)
.|...++||+|+||+||+|... ++ ..||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 4666789999999999999642 33 379999986532 234567899999999999999999999999776555
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+.+++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 99999999999999997643 4578899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC----CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHS----SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
..... .......+++.|+|||.+.+..++.++||||+|+++|||++|..|+...... .... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~---~~~~~~~~~~~ 249 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLT---HFLAQGRRLPQ 249 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHH---HHHHTTCCCCC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHH---HHhhcCCCCCC
Confidence 54321 1223456788999999999989999999999999999999966653322221 1111 11111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.. ....+.+++.+||+.||.+|||++|+++.|++
T Consensus 250 ~~~------~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 250 PEY------CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp CTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred Ccc------chHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111 11357789999999999999999999999863
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-38 Score=359.59 Aligned_cols=252 Identities=25% Similarity=0.312 Sum_probs=189.9
Q ss_pred HhccCcc-ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHH-hcCCCCceeeeeeeEec----
Q 043316 758 IDDFGEK-YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL-TEIRHRNIIKFHGFCSN---- 830 (1031)
Q Consensus 758 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l-~~l~h~niv~l~~~~~~---- 830 (1031)
.++|.+. +.||+|+||+||+|.. .+++.||||++... ..+.+|+.++ +..+||||+++++++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 3567766 6899999999999955 57899999998532 3456788886 44589999999999875
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCceEEe
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHEAHVS 907 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 907 (1031)
.+..|+||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. ||+||||||+||+++. ++.+||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 567899999999999999998643 24589999999999999999999999 9999999999999997 7889999
Q ss_pred ccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 987 (1031)
|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ......+....
T Consensus 207 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~i~~~~- 283 (400)
T 1nxk_A 207 DFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIRMGQ- 283 (400)
T ss_dssp CCTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-CSHHHHHHHTC-
T ss_pred ecccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-HHHHHHHHcCc-
Confidence 99999876432 2335667899999999999989999999999999999999999998654332110 00111111110
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+.. .......++.+++.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~--~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 284 YEFPNP--EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCCCTT--TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCc--ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111110 01112235788999999999999999999986
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-38 Score=349.59 Aligned_cols=263 Identities=21% Similarity=0.306 Sum_probs=205.6
Q ss_pred cHHHHHHHHhccCcc-ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeee
Q 043316 750 LYEEIIKAIDDFGEK-YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHG 826 (1031)
Q Consensus 750 ~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~ 826 (1031)
.+.......++|.+. +.||+|+||.||+|.. .+++.||||++..... .......+.+|+.++++++ ||||+++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET--TEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 334445556778877 8899999999999965 4699999999976542 2234678899999999995 699999999
Q ss_pred eEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCc
Q 043316 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHE 903 (1031)
Q Consensus 827 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~ 903 (1031)
++.+.+..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++. ++.
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999999986543 24689999999999999999999999 9999999999999998 789
Q ss_pred eEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 904 AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+....
T Consensus 173 ~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~ 249 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--ETYLNISQVN 249 (327)
T ss_dssp EEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC
T ss_pred EEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHHHhcc
Confidence 9999999998765332 234567999999999999999999999999999999999999998654331 1111111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....... .......+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 250 VDYSEET------FSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp CCCCTTT------TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccCchh------hcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1111111 1112235778899999999999999999975
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=339.50 Aligned_cols=253 Identities=20% Similarity=0.331 Sum_probs=200.7
Q ss_pred HhccCccceeecCCCccEEEEEeCC----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|.+.+.||+|+||.||+|.... +..||||++.... .....+.+.+|+.++++++||||+++++++.++ .
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-P 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-S
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-C
Confidence 3679999999999999999996432 3469999987643 223467899999999999999999999998754 5
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CEEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 689999999999999997643 3578999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 914 FLNPHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 914 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
....... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... .. ...........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~---~~~~~~~~~~~~ 236 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VI---GVLEKGDRLPKP 236 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HH---HHHHHTCCCCCC
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HH---HHHhcCCCCCCC
Confidence 7654322 2234456889999999998899999999999999999998 999986443321 11 111111111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 237 ~~------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 237 DL------CPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp TT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC------CCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 11 1235778999999999999999999999886
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=340.29 Aligned_cols=248 Identities=21% Similarity=0.310 Sum_probs=199.0
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----CCee
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----AQHS 834 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~~ 834 (1031)
.|.+.+.||+|+||.||+|.. .++..||+|++...... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC--HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 477888999999999999955 57889999998765432 2346788999999999999999999999865 4568
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeC-CCCceEEecccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLD-SEHEAHVSDFGI 911 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~ 911 (1031)
++||||+++++|.+++... ..+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999999764 3488899999999999999999999 7 99999999999998 789999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+..... .......|++.|+|||++.+ .++.++||||+||++|+|++|+.||......... .........+.
T Consensus 179 ~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~-- 249 (290)
T 1t4h_A 179 ATLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI----YRRVTSGVKPA-- 249 (290)
T ss_dssp GGGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH----HHHHTTTCCCG--
T ss_pred cccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH----HHHHhccCCcc--
Confidence 976533 23355678999999998875 5899999999999999999999998754432111 11111111110
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+.+++.+||+.||++|||++|+++
T Consensus 250 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 250 ---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000111235788999999999999999999986
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=364.82 Aligned_cols=318 Identities=21% Similarity=0.200 Sum_probs=192.4
Q ss_pred eeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcC
Q 043316 178 LTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 257 (1031)
++.++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 16 v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 16 VLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 444444444 4444332 3455555555555544444555555555555555555544455555555555555555555
Q ss_pred CCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccc
Q 043316 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI 337 (1031)
Q Consensus 258 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 337 (1031)
++..+..|.++++|++|+|++|++++..|..|.++++|+.|++++|.+++..|..|.++++|++|++++|.+++..+..+
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 172 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL 172 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHH
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHh
Confidence 55444455555555555555555555555555555666666666665555555555555566666666666655555566
Q ss_pred cccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccc
Q 043316 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLER 417 (1031)
Q Consensus 338 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 417 (1031)
..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|+.|++++|+++...+..|..+++|++
T Consensus 173 ~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 252 (477)
T 2id5_A 173 SHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRF 252 (477)
T ss_dssp TTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCE
T ss_pred cccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCe
Confidence 77777777777777777766667777777777777777766666655555556777777777776665566666666666
Q ss_pred eeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcc
Q 043316 418 LRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI 497 (1031)
Q Consensus 418 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l 497 (1031)
|+|++|.+.++.+..|..+++|+.|+|++|++++ ..|..|..+++|+.|+|++|+|
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------------~~~~~~~~l~~L~~L~L~~N~l 308 (477)
T 2id5_A 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAV------------------------VEPYAFRGLNYLRVLNVSGNQL 308 (477)
T ss_dssp EECCSSCCCEECTTSCTTCTTCCEEECCSSCCSE------------------------ECTTTBTTCTTCCEEECCSSCC
T ss_pred eECCCCcCCccChhhccccccCCEEECCCCccce------------------------ECHHHhcCcccCCEEECCCCcC
Confidence 6666666666666666666666666666665554 3444555566666666666666
Q ss_pred cCCChhhhhccccCceeeccccccc
Q 043316 498 VGKIPVQFEKLFSLNKLILNLNQLS 522 (1031)
Q Consensus 498 ~~~~p~~~~~l~~L~~L~L~~N~l~ 522 (1031)
++..+..|..+++|+.|++++|.+.
T Consensus 309 ~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 309 TTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp SCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred ceeCHhHcCCCcccCEEEccCCCcc
Confidence 6655556666666666666666665
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=351.69 Aligned_cols=261 Identities=23% Similarity=0.332 Sum_probs=207.4
Q ss_pred HHHHHHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcC-CCCceeeee
Q 043316 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEI-RHRNIIKFH 825 (1031)
Q Consensus 752 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l-~h~niv~l~ 825 (1031)
.......++|.+.+.||+|+||.||+|... +|+.||||++...... ......+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334455678999999999999999999764 7999999998654311 1112256788999999999 799999999
Q ss_pred eeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceE
Q 043316 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH 905 (1031)
Q Consensus 826 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 905 (1031)
+++...+..++||||+++++|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+|
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 9999999999999999999999999754 3588999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCCceeeccccCccccccccc------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH
Q 043316 906 VSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~ 979 (1031)
|+|||++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ...
T Consensus 241 l~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~--- 314 (365)
T 2y7j_A 241 LSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LML--- 314 (365)
T ss_dssp ECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---
T ss_pred EEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHH---
Confidence 9999999877543 23455679999999999864 35788999999999999999999998643321 111
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+.. ................+.+++.+||+.||++|||+.|+++
T Consensus 315 ~~i~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 315 RMIME---GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHH---TCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHh---CCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111 1111111111112235788999999999999999999986
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=337.31 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=197.1
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|... +++.||||++..... ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccc-cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 67999999999999999999664 799999999876432 2334567899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 99999999999997643 478899999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......+++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+.... . .....+..... ..+..
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~---~~~~~~~~~~~-~~~~~--- 233 (276)
T 2h6d_A 164 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--P---TLFKKIRGGVF-YIPEY--- 233 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHHHCCC-CCCTT---
T ss_pred C-cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--H---HHHHHhhcCcc-cCchh---
Confidence 3 22345578999999999987765 6899999999999999999999865432 1 11122211111 11111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 234 ---~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 234 ---LNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---cCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1135778899999999999999999986
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=346.70 Aligned_cols=250 Identities=26% Similarity=0.388 Sum_probs=201.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 46799999999999999999965 469999999986532 35678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++... ...+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+....
T Consensus 102 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 99999999999998743 23588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........|++.|+|||++.+..++.++||||+|+++|+|++|+.||....... ............... ..
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~-~~- 249 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-----AIFMIPTNPPPTFRK-PE- 249 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCCCCSS-GG-
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhcCCCcccCC-cc-
Confidence 54444455678999999999999889999999999999999999999987543311 111111111111111 11
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.||.+|||+.|+++
T Consensus 250 --~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 --LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11236788999999999999999999975
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-38 Score=352.12 Aligned_cols=262 Identities=26% Similarity=0.359 Sum_probs=195.2
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHH--HHHHhcCCCCceeeeeeeEe-----c
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALTEIRHRNIIKFHGFCS-----N 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E--i~~l~~l~h~niv~l~~~~~-----~ 830 (1031)
.++|++.+.||+|+||.||+|+. +++.||||++.... .+.+..| +..+..++||||+++++++. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 36899999999999999999976 78999999986532 2334444 44455689999999998653 2
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC------CCCeeeCCCCCCCeeeCCCCce
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC------LPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
...+++||||+++|+|.++++... .++..+..++.||++||+|||+.+ .++|+||||||+||+++.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 346789999999999999997543 478899999999999999999863 2389999999999999999999
Q ss_pred EEeccccccccCCCC--------CCceeeccccCccccccccc-------cCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 905 HVSDFGIAKFLNPHS--------SNWTAFAGTFGYAAPEIAHM-------MRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
||+|||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998764321 11234568999999999876 456789999999999999999977753222
Q ss_pred ccch-h------------hhhhHH-HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 970 TNFS-S------------FSNMIT-EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 970 ~~~~-~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.... . ...... .......+.++............+.+++.+||+.||++|||++|+++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 1100 0 000000 011112222232222223344578899999999999999999999998863
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=365.93 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=203.4
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.++||+|+||+||+|.. .+++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH--BCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 46799999999999999999965 4799999999976432 22356789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---CCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD---SEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~ 913 (1031)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||+++
T Consensus 99 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999999887543 588999999999999999999999 999999999999995 45679999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .... ..+... .....
T Consensus 173 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~---~~i~~~---~~~~~ 242 (486)
T 3mwu_A 173 CFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDIL---KRVETG---KYAFD 242 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHT---CCCSC
T ss_pred ECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHH---HHHHhC---CCCCC
Confidence 76543 33455679999999999876 589999999999999999999999864432 1111 111111 11111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..........+.+++.+||+.||.+|||+.|+++
T Consensus 243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111122346778999999999999999999986
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=364.45 Aligned_cols=194 Identities=23% Similarity=0.349 Sum_probs=155.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-----CC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN-----AQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-----~~ 832 (1031)
++|++.+.||+|+||+||+|.. .+++.||||++.... .+....+.+.+|+.++++++||||+++++++.. ..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 6799999999999999999954 579999999986542 233456789999999999999999999999843 35
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..|+||||++ ++|.++++... .+++.++..++.||+.||+|||+. |||||||||+||+++.++.+||+|||+|
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 7899999984 68999987643 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---------------------------CCceeeccccCccccccc-cccCCCccccchhhhHHHHHHHhC
Q 043316 913 KFLNPHS---------------------------SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKG 961 (1031)
Q Consensus 913 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~elltG 961 (1031)
+...... ...+..+||++|+|||++ .+..++.++||||+||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 8764321 123456789999999986 456799999999999999999993
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=361.08 Aligned_cols=198 Identities=25% Similarity=0.365 Sum_probs=168.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----Q 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~ 832 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.++++++||||+++++++... .
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 6799999999999999999954 578999999997542 2344567899999999999999999999999766 5
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..|+||||++ ++|.++++.. ..+++.++..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+|
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 7899999996 5999999764 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----------------------CceeeccccCccccccc-cccCCCccccchhhhHHHHHHHhCCCCC
Q 043316 913 KFLNPHSS----------------------NWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGNHPR 965 (1031)
Q Consensus 913 ~~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~elltG~~P~ 965 (1031)
+....... ..+..+||++|+|||++ .+..++.++||||+||++|||++|..||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 87653321 23567899999999986 5567999999999999999999866554
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=347.57 Aligned_cols=254 Identities=24% Similarity=0.384 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcE--EEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGII--FAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||.||+|+. .++.. +|+|+++... .....+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 6799999999999999999955 45664 4999886532 223456789999999999 899999999999999999
Q ss_pred EEEEEeccCCCchhhcccCC-------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 835 FIVSEYLDRGSLTTILKDDA-------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
++||||+++++|.+++.... ....+++.+++.++.|++.||+|||++ ||+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999997653 124689999999999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHH
Q 043316 902 HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 980 (1031)
+.+||+|||+++..... .......+++.|+|||++.+..++.++||||+||++|||++ |+.||...... ....
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~ 252 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYE 252 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----HHHH
Confidence 99999999999754321 12234456889999999998889999999999999999998 99998654321 1112
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+........+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 253 ~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 253 KLPQGYRLEKPLN------CDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HGGGTCCCCCCTT------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhhcCCCCCCCCC------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2222211111111 1235778999999999999999999999886
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=377.29 Aligned_cols=252 Identities=22% Similarity=0.313 Sum_probs=207.8
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|+. .+++.||||++++..... ....+.+.+|..++..+ +||+|+++++++.+.+.+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH-TTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc-HHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 457899999999999999999965 568999999998754322 34567788999999988 699999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||+++|+|.++++... .+++.++..++.||+.||+|||+. +||||||||+|||++.++++||+|||+|+.
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999999998643 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++.
T Consensus 492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~---~~i~~~-~~~~p~-- 563 (674)
T 3pfq_A 492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELF---QSIMEH-NVAYPK-- 563 (674)
T ss_dssp CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHSS-CCCCCT--
T ss_pred cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHH---HHHHhC-CCCCCc--
Confidence 54444445667899999999999999999999999999999999999999875432 1111 111111 111221
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTM-----KKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~ 1027 (1031)
. ...++.++|.+||+.||++||++ +||++
T Consensus 564 -~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 564 -S---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -T---SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -c---CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1 12357789999999999999997 66653
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=371.70 Aligned_cols=253 Identities=24% Similarity=0.412 Sum_probs=206.3
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||.||+|.+..+..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++|
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 36788999999999999999988888889999997643 245689999999999999999999999876 678999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.++++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999997532 23588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ......++..|+|||++.++.++.++|||||||++|||++ |+.||...... .....+........+..
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~-- 488 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPE-- 488 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTT--
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCC--
Confidence 211 1223456788999999998899999999999999999999 99998654321 11122222111111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+.+++.+||+.||++|||+++|++.|++
T Consensus 489 ----~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 489 ----CPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 12357788999999999999999999999874
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-38 Score=353.65 Aligned_cols=257 Identities=22% Similarity=0.321 Sum_probs=203.8
Q ss_pred HhccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~ 832 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||+++...........+.+.+|+++++++ +||||+++++++.+++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999976 478999999997654333333455677899999999 6999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++||||+++++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999997643 588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC-CCceeeccccCcccccccccc--CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 913 KFLNPHS-SNWTAFAGTFGYAAPEIAHMM--RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 913 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
+.+.... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ........... ...
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~-~~~ 284 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKS-EPP 284 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHC-CCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHhcc-CCC
Confidence 8654322 223346799999999999863 478899999999999999999999864433211 11111111111 112
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARP-----TMKKVCNL 1028 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1028 (1031)
.+.. ....+.+++.+||+.||++|| +++|+++.
T Consensus 285 ~~~~------~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 285 YPQE------MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCTT------SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCcc------cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 2211 123567889999999999999 99998763
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=368.20 Aligned_cols=253 Identities=23% Similarity=0.352 Sum_probs=206.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 36799999999999999999965 47999999999665432 23457889999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
||||+.+|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||++ +.++.+||+|||++.
T Consensus 104 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999999987653 488999999999999999999999 99999999999999 467899999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.+... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ... ..+... .....
T Consensus 178 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~---~~i~~~---~~~~~ 247 (484)
T 3nyv_A 178 HFEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DIL---KKVEKG---KYTFE 247 (484)
T ss_dssp HBCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHHC---CCCCC
T ss_pred Ecccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHH---HHHHcC---CCCCC
Confidence 77543 33455679999999999876 6899999999999999999999998754331 111 111111 11111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..........+.+++.+||+.||.+|||+.|+++
T Consensus 248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 1111122346788999999999999999999975
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-38 Score=355.93 Aligned_cols=247 Identities=16% Similarity=0.130 Sum_probs=198.7
Q ss_pred HhccCccceeecCCCccEEEE------EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC---CCceeeeeeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKA------ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNIIKFHGFC 828 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~~~~ 828 (1031)
.++|.+.+.||+|+||+||+| ...+++.||||+++.. ....+.+|++++++++ |+||+++++++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 367999999999999999999 3457899999998653 3456778888888776 99999999999
Q ss_pred ecCCeeEEEEEeccCCCchhhcccCC--ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC------
Q 043316 829 SNAQHSFIVSEYLDRGSLTTILKDDA--AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS------ 900 (1031)
Q Consensus 829 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~------ 900 (1031)
...+..++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||++ |||||||||+||+++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcc
Confidence 99999999999999999999997532 234689999999999999999999999 9999999999999998
Q ss_pred -----CCceEEeccccccccCC--CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch
Q 043316 901 -----EHEAHVSDFGIAKFLNP--HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS 973 (1031)
Q Consensus 901 -----~~~~kl~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~ 973 (1031)
++.+||+|||+|+.+.. ........+||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 293 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce
Confidence 89999999999976532 22234556799999999999999999999999999999999999999753322110
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCC-CCHHHHHHHhh
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR-PTMKKVCNLLC 1030 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-ps~~evl~~L~ 1030 (1031)
. ......... . ...+.+++..|++.+|.+| |+++++.+.|+
T Consensus 294 ~-----------~~~~~~~~~--~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 294 K-----------PEGLFRRLP--H---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp E-----------ECSCCTTCS--S---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred e-----------echhccccC--c---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 0 111111111 1 2245677889999999998 67888777665
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=337.96 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=199.6
Q ss_pred HHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||+||+|... +++.||||++..... .......+.+|+..+.++ +||||+++++++.+++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA--GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT--TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc--ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 3478999999999999999999654 799999999876432 223467788999999999 899999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC------------
Q 043316 835 FIVSEYLDRGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE------------ 901 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------------ 901 (1031)
++||||+++++|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 999999999999999976432 24589999999999999999999999 99999999999999844
Q ss_pred -------CceEEeccccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccch
Q 043316 902 -------HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS 973 (1031)
Q Consensus 902 -------~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~ 973 (1031)
..+||+|||.+....... ...||+.|+|||++.+. .+++++||||+||++|||++|..|+....
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---- 235 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---- 235 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----
T ss_pred ccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----
Confidence 479999999998765432 34589999999998875 56789999999999999999987753221
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.....+..+... ...+.+++.+||+.||++|||+.|+++
T Consensus 236 ----~~~~~~~~~~~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 ----QWHEIRQGRLPRIPQVL------SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HHHHHHTTCCCCCSSCC------CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHcCCCCCCCccc------CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11112222222222111 235778899999999999999999985
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=371.27 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=198.3
Q ss_pred cCccc-eeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 761 FGEKY-CIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 761 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
+.+.+ .||+|+||.||+|... ++..||||+++... .....+.+.+|++++++++|||||++++++.. +..++
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 34444 7999999999999653 46789999997642 23457889999999999999999999999987 56899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 413 v~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EEECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 999999999999997542 4589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 917 PHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 917 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
..... .....+++.|+|||++.++.++.++|||||||++|||++ |+.||...... .. ...+........+.
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~---~~~i~~~~~~~~p~ 562 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EV---MAFIEQGKRMECPP 562 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HH---HHHHHTTCCCCCCT
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HH---HHHHHcCCCCCCCC
Confidence 33221 122345689999999998899999999999999999998 99998755432 11 12222221112221
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. ....+.+++.+||+.||++||++.+|++.|+
T Consensus 563 ~------~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 563 E------CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp T------CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred c------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 1236778999999999999999999999886
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=365.29 Aligned_cols=252 Identities=22% Similarity=0.318 Sum_probs=199.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||+||+|+. .+++.||||++...... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 46799999999999999999965 47899999999765422 2235678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~ 913 (1031)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.. +.+||+|||++.
T Consensus 114 v~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 999999999999887543 488899999999999999999999 99999999999999764 459999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.. . .....
T Consensus 188 ~~~~~-~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~---~---~~~~~ 257 (494)
T 3lij_A 188 VFENQ-KKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEK---G---KYTFD 257 (494)
T ss_dssp ECBTT-BCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---T---CCCCC
T ss_pred ECCCC-ccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh---C---CCCCC
Confidence 77543 23455679999999999864 6899999999999999999999998754431 11111111 1 11111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..........+.+++.+||+.||.+|||+.|+++
T Consensus 258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1111122336778999999999999999999875
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=365.87 Aligned_cols=255 Identities=23% Similarity=0.321 Sum_probs=202.3
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh---------hhcHHHHHHHHHHHhcCCCCceeeeee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE---------MADQDEFLNEVLALTEIRHRNIIKFHG 826 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~~~~~Ei~~l~~l~h~niv~l~~ 826 (1031)
..++|.+.++||+|+||+||+|.. .+++.||||++........ ....+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 347899999999999999999965 4689999999976542211 134678899999999999999999999
Q ss_pred eEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---c
Q 043316 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---E 903 (1031)
Q Consensus 827 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~ 903 (1031)
++.+++..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999999987643 489999999999999999999999 999999999999999776 6
Q ss_pred eEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 904 AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
+||+|||++...... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~--- 260 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVE--- 260 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH---
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH---
Confidence 999999999877543 33455679999999999874 6899999999999999999999998754331 1111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ................+.+++.+||+.||.+|||++|+++
T Consensus 261 ~---~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 261 K---GKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp H---CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c---CCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1 1111111111122346788999999999999999999975
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=345.51 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++.... .......+.+|+.++++++||||+++++++.+.+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 6799999999999999999973 357799999996532 2234667899999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc----cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceE
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA----AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAH 905 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~k 905 (1031)
..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.+ ..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999976532 13588999999999999999999999 99999999999999944 4699
Q ss_pred EeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHh
Q 043316 906 VSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
|+|||++........ ......+++.|+|||++.+..++.++||||+||++|||+| |+.||...... . ....+
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~---~~~~~ 258 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E---VLEFV 258 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H---HHHHH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--H---HHHHH
Confidence 999999986533221 2234567889999999998899999999999999999998 99997654321 1 11111
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
........+.. ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 259 ~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 259 TSGGRMDPPKN------CPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HTTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hcCCCCCCCCC------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11111111111 1235778999999999999999999999875
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=351.77 Aligned_cols=254 Identities=25% Similarity=0.381 Sum_probs=202.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 6799999999999999999965 478999999987642 223467889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ||+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999997643 4888999999999999999999832 899999999999999999999999999976532
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhh---------------------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS--------------------- 976 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~--------------------- 976 (1031)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...........
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 22345789999999999999999999999999999999999999875433211000
Q ss_pred ----------------hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 977 ----------------NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 977 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...........+..+. . .....+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS---G--VFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCT---T--TSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCc---c--cccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0001111111111110 0 01235788999999999999999999975
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=350.63 Aligned_cols=255 Identities=20% Similarity=0.293 Sum_probs=194.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----- 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----- 832 (1031)
++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.++++++||||+++++++...+
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 5799999999999999999965 579999999986543 22344678899999999999999999999997653
Q ss_pred -eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 -HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..|+||||+ +++|.++++.. .+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 78999998753 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT---------- 980 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~---------- 980 (1031)
++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.....
T Consensus 175 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 175 ARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp CEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHH
T ss_pred cccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHH
Confidence 987643 2345678999999999877 678999999999999999999999987544311 1111000
Q ss_pred ---------HhhhhcCCCCCCC-ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 ---------EINQNLDHRLPTP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 ---------~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+...... ..........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000011000000 0000111235788999999999999999999986
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=356.84 Aligned_cols=257 Identities=17% Similarity=0.249 Sum_probs=201.8
Q ss_pred hccCccceeecCCCccEEEEEeC---------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceee------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP---------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK------ 823 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~------ 823 (1031)
++|.+.+.||+|+||.||+|... +++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 57999999999999999999765 3789999998643 35678999999999999988
Q ss_pred ---------eeeeEec-CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCC
Q 043316 824 ---------FHGFCSN-AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISS 893 (1031)
Q Consensus 824 ---------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 893 (1031)
+++++.. ++..++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||++ ||+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 5677765 78889999999 999999998652 24689999999999999999999999 999999999
Q ss_pred CCeeeCCCC--ceEEeccccccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCC
Q 043316 894 KNVLLDSEH--EAHVSDFGIAKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 894 ~NIll~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P 964 (1031)
+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998 899999999987643221 12345789999999999998999999999999999999999999
Q ss_pred CCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 965 RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
|.......................... ...........+.+++.+||+.||++|||++|+++.|+
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKPGPFVG-PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSCCCEEC-TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccCCcCHHHHHHHHHhccCChhhhhh-hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 876543333333222222221111111 00000011236788999999999999999999999986
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=336.46 Aligned_cols=245 Identities=21% Similarity=0.362 Sum_probs=201.1
Q ss_pred HHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----- 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----- 830 (1031)
...+|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 3468999999999999999999664 79999999986532 245689999999999999999998854
Q ss_pred -----------CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 831 -----------AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 831 -----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
....++||||+++++|.+++.... ...+++..++.++.|++.||+|||+. ||+||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 455899999999999999997543 24588999999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH
Q 043316 900 SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~ 979 (1031)
.++.+||+|||++....... ......+++.|+|||++.+..++.++||||+|+++|||++|..|+.... ...
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~ 228 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFF 228 (284)
T ss_dssp ETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHH
T ss_pred CCCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHH
Confidence 99999999999998765432 2345678999999999999889999999999999999999998843111 111
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..... ..++... ...+.+++.+||+.||++|||+.|+++.|+
T Consensus 229 ~~~~~---~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 229 TDLRD---GIISDIF------DKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HHHHT---TCCCTTS------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhc---ccccccC------CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111 1111111 124678899999999999999999999875
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-37 Score=338.88 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=200.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeE--ecCCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC--SNAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~--~~~~~~ 834 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++............+.+.+|++++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999965 578999999998765443344577899999999999999999999998 445688
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||++++ +.+++.... ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999876 767765543 34689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--CceeeccccCccccccccccC--CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSS--NWTAFAGTFGYAAPEIAHMMR--ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
...... ......|++.|+|||++.+.. ++.++||||+|+++|||++|+.||..... .. ....+... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~---~~~~i~~~-~~~~ 232 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YK---LFENIGKG-SYAI 232 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HH---HHHHHHHC-CCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HH---HHHHHhcC-CCCC
Confidence 653222 223456899999999987644 37799999999999999999999875432 11 11111111 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+.. ....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~------~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 233 PGD------CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CSS------SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCc------cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 1235678899999999999999999986
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=339.01 Aligned_cols=255 Identities=17% Similarity=0.217 Sum_probs=200.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeE-ecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC-SNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~-~~~~~~~ 835 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.+++.++|++++..++++ .+.+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS------SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc------chhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 36799999999999999999965 689999999986543 234578999999999988766666555 6678889
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---CCCceEEeccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD---SEHEAHVSDFGIA 912 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a 912 (1031)
+||||+ +++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 899999997433 3589999999999999999999999 999999999999994 7889999999999
Q ss_pred cccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc-hhhhhhHHHhhh
Q 043316 913 KFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF-SSFSNMITEINQ 984 (1031)
Q Consensus 913 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~-~~~~~~~~~~~~ 984 (1031)
........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ......+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc
Confidence 87654332 1245678999999999999899999999999999999999999987543321 111111111111
Q ss_pred hcC-CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 985 NLD-HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 985 ~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
... ..... .....+.+++.+||+.||++|||++|+++.|+
T Consensus 236 ~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 236 STPIEVLCK------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HSCHHHHTT------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred CCchHHHHh------hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 100 00000 01235788999999999999999999999986
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=347.77 Aligned_cols=260 Identities=20% Similarity=0.298 Sum_probs=200.4
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec------
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN------ 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------ 830 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .......+.+|+.++++++||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC--SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc--cccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 36899999999999999999965 6799999999866532 22335678899999999999999999999977
Q ss_pred --CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 831 --AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 831 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
.+..++||||+++ ++.+.+.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred cCCceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEcc
Confidence 4568999999985 7777765542 3589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCC----CCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 909 FGIAKFLNPHS----SNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 909 fg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||+++.+.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+....
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~ 245 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLC 245 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHH
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHh
Confidence 99998764321 22345678999999999876 45799999999999999999999998754331 1111111111
Q ss_pred hhcCCCCC----------------CCChhHHHH------HHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLP----------------TPSRDVMDK------LMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~----------------~~~~~~~~~------~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ .......+. ...+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 11111110 000111111 234789999999999999999999985
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=339.41 Aligned_cols=257 Identities=16% Similarity=0.211 Sum_probs=198.0
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeE-ecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC-SNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~-~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++.++|++++..++++ .+....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc------cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 347899999999999999999964 679999999875543 123477899999999988776666655 677888
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGI 911 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~ 911 (1031)
++||||+ +++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 9999999 899999997542 3589999999999999999999999 99999999999999 7889999999999
Q ss_pred ccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch-hhhhhHHHhh
Q 043316 912 AKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS-SFSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~-~~~~~~~~~~ 983 (1031)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..........
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 234 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc
Confidence 987654322 12356789999999999999999999999999999999999999875443211 1111111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...+ .. .........+.+++.+||+.||++|||++|+++.|+
T Consensus 235 ~~~~--~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 235 MSTP--IE---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHSC--HH---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred ccch--hh---hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 1100 00 000001236788999999999999999999999886
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=347.19 Aligned_cols=257 Identities=20% Similarity=0.311 Sum_probs=200.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe----cCC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS----NAQ 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~----~~~ 832 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 36799999999999999999965 679999999986532 245678899999999999999999999986 345
Q ss_pred eeEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 7899999999999999997531 234589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC---------ceeeccccCccccccccccC---CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH
Q 043316 912 AKFLNPHSSN---------WTAFAGTFGYAAPEIAHMMR---ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 912 a~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~ 979 (1031)
+......... .....||+.|+|||++.+.. ++.++||||+||++|||++|+.||+.............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 8765321111 12345699999999987543 68899999999999999999999854222111111111
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. .. ...+... .....+.+++.+||+.||.+|||++|+++.|+
T Consensus 261 ~---~~--~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 261 Q---NQ--LSIPQSP----RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp H---CC----CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred h---cc--CCCCccc----cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 1 11 1111111 11236788999999999999999999999986
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=345.34 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=197.4
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC----HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 67999999999999999999664 68999999986542 34577899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ..+++.++..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999987532 3588999999999999999999999 999999999999999999999999999864322
Q ss_pred CCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.........|++.|+|||++. +..++.++||||+|+++|||++|+.||...... ...........+....
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 244 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLKIAKSDPPTLLT 244 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCSS
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHHHHhccCCcccCC
Confidence 111223457899999999983 567889999999999999999999998754431 1111111111111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .....+.+++.+||+.||++|||+.|+++
T Consensus 245 -~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 -PS---KWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -GG---GSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -cc---ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11 11236788999999999999999999975
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=339.66 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=201.3
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc----ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 46799999999999999999965 479999999987543 1234568899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999999987543 488899999999999999999999 99999999999999 788899999999997
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.... .......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ... ...+...........
T Consensus 158 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~---~~~i~~~~~~~~~~~ 230 (304)
T 2jam_A 158 MEQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKL---FEKIKEGYYEFESPF 230 (304)
T ss_dssp CCCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHH---HHHHHHCCCCCCTTT
T ss_pred ecCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHH---HHHHHcCCCCCCccc
Confidence 6432 223455789999999999998999999999999999999999999864432 111 111111111110110
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .....+.+++.+||+.||++|||++|+++
T Consensus 231 ~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 231 WD---DISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TT---TSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cc---cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01 11236778999999999999999999975
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=347.62 Aligned_cols=256 Identities=21% Similarity=0.276 Sum_probs=191.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----- 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----- 832 (1031)
++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC--ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 6799999999999999999954 5789999999875432 2334677889999999999999999999997664
Q ss_pred -eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 -HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..++||||+++ +|.+++.. .+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 78777753 378899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE---------- 981 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~---------- 981 (1031)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .+......
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHHT
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 9876432 22345678999999999999899999999999999999999999987544311 11110000
Q ss_pred -----hhhh--cCCC--------------CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 -----INQN--LDHR--------------LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 -----~~~~--~~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... ..+. .+............+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000 0000 01111111222457889999999999999999999986
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=343.78 Aligned_cols=256 Identities=24% Similarity=0.293 Sum_probs=197.5
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
..++|.+.+.||+|+||.||+|.. .+++.||||++...... .+......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 346899999999999999999955 56899999998764321 1122345688999999999999999999999776
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEec
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSD 908 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~D 908 (1031)
. .++||||+++++|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 799999999999999987643 588999999999999999999999 9999999999999987665 99999
Q ss_pred cccccccCCCCCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
||++...... .......||+.|+|||++. +..++.++||||+||++|||++|+.||........ ....+...
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~--- 235 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSG--- 235 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHHHT---
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHHhC---
Confidence 9999876432 2233457899999999974 45688999999999999999999999875443211 11111111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.........+.+++.+||+.||++|||+.|+++
T Consensus 236 ---~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 ---KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp ---CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---ccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 111111111112346788999999999999999999975
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=358.97 Aligned_cols=244 Identities=15% Similarity=0.112 Sum_probs=189.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHH---HHHhcCCCCceeeee-------ee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEV---LALTEIRHRNIIKFH-------GF 827 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei---~~l~~l~h~niv~l~-------~~ 827 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|+ +.+++++|||||+++ ++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 5788999999999999999975 57999999999754321 223467889999 455566899999998 66
Q ss_pred EecCC-----------------eeEEEEEeccCCCchhhcccCCcc----ccCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 043316 828 CSNAQ-----------------HSFIVSEYLDRGSLTTILKDDAAA----KEFGWNQRMNVIKGVANALSYLHHDCLPPI 886 (1031)
Q Consensus 828 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 886 (1031)
+.+.+ ..|+||||+ +|+|.+++...... ..+++..++.++.||+.||+|||++ ||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 66553 278999999 68999999764221 1244588889999999999999999 99
Q ss_pred eeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeeccccCcccccccccc-----------CCCccccchhhhHHH
Q 043316 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-----------RATEKYDVHSFGVLA 955 (1031)
Q Consensus 887 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslG~il 955 (1031)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 9999999999999999999999999986432 3345567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 956 LEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 956 ~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
|||++|+.||........ . .. .....+.. ...+.+++.+||+.||++|||+.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~~-~----~~----~~~~~~~~-------~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALGG-S----EW----IFRSCKNI-------PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------CC-S----GG----GGSSCCCC-------CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCcccccccc-h----hh----hhhhccCC-------CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999864432110 0 00 01111111 135778899999999999999999985
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=371.28 Aligned_cols=246 Identities=25% Similarity=0.369 Sum_probs=196.6
Q ss_pred ceeecCCCccEEEEEe---CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEec
Q 043316 765 YCIGKGRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
+.||+|+||.||+|.+ .+++.||||+++.... +....+.+.+|++++++++|||||++++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG--CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 4799999999999944 3468899999976532 23456789999999999999999999999975 4578999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC-
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS- 920 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 920 (1031)
++|+|.++++.. ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 452 ~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999999754 3588999999999999999999999 999999999999999999999999999987654332
Q ss_pred --CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 921 --NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 921 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... . ....+........+..
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~---~~~~i~~~~~~~~p~~---- 596 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--E---VTAMLEKGERMGCPAG---- 596 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--H---HHHHHHTTCCCCCCTT----
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCCC----
Confidence 1233456789999999999999999999999999999998 99998754431 1 1122222222222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...++.+++.+||+.||++|||+++|++.|+
T Consensus 597 --~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 597 --CPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp --CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1236778999999999999999999999986
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=341.30 Aligned_cols=255 Identities=27% Similarity=0.428 Sum_probs=194.5
Q ss_pred hccCccceeecCCCccEEEEEeC--CCc--EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--SGI--IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||+||+|++. +++ .||||+++..... .....+.+.+|++++++++||||+++++++.++. .
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 67999999999999999999642 333 6899998764322 2345678999999999999999999999998765 7
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++|+||+++++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 99999999999999997642 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... .....++..|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+... ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~-~~~~ 244 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILHKIDKE-GERL 244 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTS-CCCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HHHHHHHcc-CCCC
Confidence 7543321 223456788999999998889999999999999999999 99998654331 111111111 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. . .....+.+++.+||+.||++|||+.|+++.|+
T Consensus 245 ~~~-~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 245 PRP-E---DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCC-T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-c---CcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 111 1 11236788999999999999999999999886
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=348.54 Aligned_cols=254 Identities=21% Similarity=0.323 Sum_probs=182.2
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------ 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 831 (1031)
++|++.+.||+|+||.||+|. ..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 679999999999999999995 4679999999986542 2234567888999999999999999999998654
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++|+||+ +++|.++++. ..+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5679999999 6899998875 3488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH---------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE--------- 981 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~--------- 981 (1031)
++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 179 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 179 ARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELL 254 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHH
T ss_pred cccccc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 987543 2345678999999999877 678999999999999999999999987554311 11111000
Q ss_pred ----------hhhhcCCCCCCCChh--HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 ----------INQNLDHRLPTPSRD--VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ----------~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...... ..+..... .......+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 255 KKISSESARNYIQSLT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TTCCCHHHHHHHHTSC-CCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhhHHHHHHHhccC-CCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000000 00100000 0011235789999999999999999999975
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=342.25 Aligned_cols=259 Identities=22% Similarity=0.347 Sum_probs=204.0
Q ss_pred HhccCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 36789999999999999999973 468999999987632 234678999999999999999999999986654
Q ss_pred --eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 833 --HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 833 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
..++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 7899999999999999997653 3588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh----------h-h
Q 043316 911 IAKFLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS----------F-S 976 (1031)
Q Consensus 911 ~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~----------~-~ 976 (1031)
++......... .....++..|+|||.+.+..++.++||||+|+++|||+||..||......... . .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 99877543321 12345677899999999888999999999999999999999986533111000 0 0
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..............+. . ...++.+++.+||+.||++|||+.|+++.|++
T Consensus 271 ~~~~~~~~~~~~~~~~---~---~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPD---G---CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp HHHHHHHTTCCCCCCT---T---CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCC---c---ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 0111111111111111 1 12367889999999999999999999999863
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=344.93 Aligned_cols=252 Identities=25% Similarity=0.375 Sum_probs=195.3
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN---- 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~---- 830 (1031)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 457799999999999999999965 579999999986532 2356788999999998 79999999999976
Q ss_pred --CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 831 --AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 831 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
.+..++||||+++++|.+++.... ...+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 567899999999999999997653 34688999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||++..............|++.|+|||++. +..++.++||||+||++|+|++|+.||....... ......
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~ 247 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----ALFLIP 247 (326)
T ss_dssp CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHH
T ss_pred CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-----HHHHhh
Confidence 999987654433345567899999999986 5678899999999999999999999986543311 111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+..... .....+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 248 RNPAPRLKSK-----KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HSCCCCCSCS-----CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCccccCCcc-----ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111111110 11236778999999999999999999986
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=340.94 Aligned_cols=252 Identities=18% Similarity=0.276 Sum_probs=199.2
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEec--CCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSN--AQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~--~~~~ 834 (1031)
++|++.+.||+|+||+||+|. ..+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.+ ....
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 679999999999999999995 467999999998643 3567889999999997 9999999999987 6778
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEecccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAK 913 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~ 913 (1031)
++||||+++++|.++++. +++.++..++.|++.||+|||+. ||+||||||+||+++.++ .+||+|||+++
T Consensus 109 ~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 999999999999998853 77889999999999999999999 999999999999999777 89999999998
Q ss_pred ccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh--------h
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN--------Q 984 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~--------~ 984 (1031)
...... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.................. .
T Consensus 180 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 180 FYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp ECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 765432 3355678999999999877 66899999999999999999999998544332222211111000 0
Q ss_pred hcCCCCCC------------------CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 NLDHRLPT------------------PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ~~~~~~~~------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ ...........+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000 00000001346789999999999999999999986
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=344.64 Aligned_cols=259 Identities=26% Similarity=0.384 Sum_probs=185.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 46799999999999999999965 4789999999865432 2345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccC-----CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 837 VSEYLDRGSLTTILKDD-----AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
||||+++++|.+++... .....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 99999999999998642 1234589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-----CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 912 AKFLNPHSS-----NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 912 a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
+........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......... ... ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~-~~ 242 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM----LTL-QN 242 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH----HHH-TS
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH----HHh-cc
Confidence 987643221 1234578999999999876 568999999999999999999999987554321111 010 11
Q ss_pred cCCCCCCCC---hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+...... .........+.+++.+||+.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111100000 000011235778999999999999999999985
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=338.69 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=187.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+.++...++.++||||+++++++.+++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 36799999999999999999965 5799999999976532 12233444555566888899999999999999999999
Q ss_pred EEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||++ |+|.+++... .....+++..++.++.|++.||+|||+++ ||+||||||+||+++.++.+||+|||++...
T Consensus 84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999997 5887777542 12346899999999999999999999852 8999999999999999999999999999876
Q ss_pred CCCCCCceeeccccCccccccc----cccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIA----HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
.... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||+.............. ......+
T Consensus 161 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~ 235 (290)
T 3fme_A 161 VDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----EPSPQLP 235 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH----SCCCCCC
T ss_pred cccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc----cCCCCcc
Confidence 4432 23445789999999996 5567899999999999999999999998754433222222111 1111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. . .....+.+++.+||+.||++|||++|+++
T Consensus 236 ~--~---~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 A--D---KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp T--T---TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c--c---cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1 1 11235788999999999999999999975
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-37 Score=346.01 Aligned_cols=258 Identities=21% Similarity=0.347 Sum_probs=204.7
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhh-------------hcHHHHHHHHHHHhcCCCCceeee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEM-------------ADQDEFLNEVLALTEIRHRNIIKF 824 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-------------~~~~~~~~Ei~~l~~l~h~niv~l 824 (1031)
.++|.+.+.||+|+||.||+|.. +++.||||++......... ...+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36799999999999999999988 9999999999765432111 012789999999999999999999
Q ss_pred eeeEecCCeeEEEEEeccCCCchhh------cccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCee
Q 043316 825 HGFCSNAQHSFIVSEYLDRGSLTTI------LKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVL 897 (1031)
Q Consensus 825 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIl 897 (1031)
++++.+.+..++||||+++++|.++ +.... ...+++..++.++.|++.||+|||+ . ||+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999999 54421 3568999999999999999999999 8 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCCceeeccccCcccccccccc-CCCc-cccchhhhHHHHHHHhCCCCCCCcCccchhh
Q 043316 898 LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATE-KYDVHSFGVLALEVIKGNHPRDYVSTNFSSF 975 (1031)
Q Consensus 898 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwslG~il~elltG~~P~~~~~~~~~~~ 975 (1031)
++.++.+||+|||.+...... ......+++.|+|||++.+. .++. ++||||+||++|||++|+.||........ .
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~ 261 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE-L 261 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH-H
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-H
Confidence 999999999999999876432 33456789999999999877 5665 99999999999999999999875543211 1
Q ss_pred hhhHHHhhhhcCCCCCCCC-------------hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 976 SNMITEINQNLDHRLPTPS-------------RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+... ....+... .........+.+++.+||+.||.+|||++|+++
T Consensus 262 ---~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 ---FNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ---HHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---HHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111 01111000 000112236788999999999999999999986
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-37 Score=337.35 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=203.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhh-----hhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLL-----FDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~ 830 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .......+.+.+|+.+++++. ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 47899999999999999999965 4789999999865421 111223567889999999996 9999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
.+..++||||+++++|.+++... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999764 3588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCcccccccc------ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAH------MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ 984 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~ 984 (1031)
.+....... ......+++.|+|||++. ...++.++||||+|+++|||++|+.||...... ... ..+..
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~---~~~~~ 243 (298)
T 1phk_A 170 FSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LML---RMIMS 243 (298)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHH
T ss_pred chhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHH---HHHhc
Confidence 998765432 334567899999999985 346788999999999999999999998644321 111 11111
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ...+. .........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~-~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GN-YQFGS--PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TC-CCCCT--TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CC-cccCc--ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11 11111 111122346788999999999999999999975
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=349.67 Aligned_cols=310 Identities=21% Similarity=0.280 Sum_probs=212.7
Q ss_pred CCCcccEEecCCCcCcCCCccc-cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCce
Q 043316 99 SFPHLMYLNLSCNVLYGNIPPQ-ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINV 177 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 177 (1031)
.++++++|++++|.++ .+|+. +..+++|++|+|++|.+++..|..++.+++|++|+|++|++++..|..++++++|++
T Consensus 43 ~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 4688999999999987 45554 688999999999999998777778999999999999999998777778899999999
Q ss_pred eeccCcccCCCCCCc-ccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 178 LTLCHNNFSGRIPPS-LGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
|+|++|.++ .+|.. |+++++|++|++++|++++..|..|+++++|++|++++|++++. .+..+++|+.|++++|.
T Consensus 122 L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 122 LVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNL 197 (390)
T ss_dssp EECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSC
T ss_pred EECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccc
Confidence 999999988 55554 68899999999999998877777888888999999999888853 35667888888888887
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 336 (1031)
+++. ...++|++|++++|+++.. |.. ..++|+.|++++|++++. ..+.++++|++|++++|.+++..|..
T Consensus 198 l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~ 267 (390)
T 3o6n_A 198 LSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHP 267 (390)
T ss_dssp CSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGG
T ss_pred cccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhH
Confidence 7642 3345778888888877643 322 235677777777776642 34444555555555555555444444
Q ss_pred ccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccc
Q 043316 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 416 (1031)
|+.+++|++|+|++|++++ +|..+..+++|++|++++|++.++ |..+..+++|+
T Consensus 268 ~~~l~~L~~L~L~~n~l~~-------------------------~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~ 321 (390)
T 3o6n_A 268 FVKMQRLERLYISNNRLVA-------------------------LNLYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLE 321 (390)
T ss_dssp GTTCSSCCEEECCSSCCCE-------------------------EECSSSCCTTCCEEECCSSCCCCC-GGGHHHHTTCS
T ss_pred ccccccCCEEECCCCcCcc-------------------------cCcccCCCCCCCEEECCCCcceec-CccccccCcCC
Confidence 5555555555555555443 233334444455555555544432 33344455555
Q ss_pred ceeccccccccccccccCCCCCCCeeccccccccCc
Q 043316 417 RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452 (1031)
Q Consensus 417 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 452 (1031)
+|++++|++..+. +..+++|+.|++++|++.+.
T Consensus 322 ~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 322 NLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp EEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred EEECCCCccceeC---chhhccCCEEEcCCCCccch
Confidence 5555555554442 44556666777777766654
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=345.87 Aligned_cols=250 Identities=20% Similarity=0.278 Sum_probs=184.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEe-------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCS------- 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~------- 829 (1031)
.+|++.++||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 5799999999999999999965 579999999985542 234667899999999996 999999999984
Q ss_pred -cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCCCCceEE
Q 043316 830 -NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 830 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl 906 (1031)
.....++||||++ |+|.+++........+++.+++.++.||+.||+|||+. + |+||||||+||+++.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3455899999996 79999887644445689999999999999999999999 8 999999999999999999999
Q ss_pred eccccccccCCCCCC------------ceeeccccCccccccc---cccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 907 SDFGIAKFLNPHSSN------------WTAFAGTFGYAAPEIA---HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
+|||+++........ .....+|+.|+|||++ .+..++.++||||+||++|||++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999876543221 1134589999999998 5667899999999999999999999998643321
Q ss_pred chhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 972 FSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. ... ........... ...+.+++.+||+.||++|||+.|+++.|+
T Consensus 260 ~-----~~~---~~~~~~~~~~~------~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 260 R-----IVN---GKYSIPPHDTQ------YTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp --------------CCCCTTCCS------SGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred H-----hhc---CcccCCccccc------chHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0 001 11111111111 123667899999999999999999999886
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=367.97 Aligned_cols=351 Identities=18% Similarity=0.197 Sum_probs=232.8
Q ss_pred CccCCCCCCCCCCCCCCCCc----cceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccc
Q 043316 47 SLLSSWTLYPANATKISPCT----WFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQIS 122 (1031)
Q Consensus 47 ~~~~sw~~~~~~~~~~~~C~----w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~ 122 (1031)
..+++|. ++.+||. |.++.|+. +| +.........++ -..+++++.|++++|.+.+..+..+.
T Consensus 7 ~~l~~~~------~~~~C~~~~~~~~c~~~~~--~i---~~~~~~~~~~~~---~l~l~~l~~l~l~~~~l~~lp~~~~~ 72 (597)
T 3oja_B 7 YNVKPRQ------PEYKCIDSNLQYDCVFYDV--HI---DMQTQDVYFGFE---DITLNNQKIVTFKNSTMRKLPAALLD 72 (597)
T ss_dssp ----CCC------SEECCCCC--CCSEEECSC--EE---CSSCCCCEESCS---SGGGCCCSEEEESSCEESEECTHHHH
T ss_pred ccccCCC------CCCcCcccCcCceeEecCc--ee---cccccccccCcc---cccCCCceEEEeeCCCCCCcCHHHHc
Confidence 3477887 5667773 77777753 11 111111111121 22467889999999998754444578
Q ss_pred cCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 123 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 89999999999999998777889999999999999999997777778999999999999999985444456889999999
Q ss_pred EecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc
Q 043316 203 YLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282 (1031)
Q Consensus 203 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 282 (1031)
+|++|.+++..|..|+++++|++|+|++|++++. + ++.+++|+.|++++|.+++. ...++|+.|++++|.++
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~--~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~ 224 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSIN 224 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-C--GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCC
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-C--hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccc
Confidence 9999999887788888889999999999988853 2 56677888888888877642 33456778888888776
Q ss_pred ccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccC
Q 043316 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIG 362 (1031)
Q Consensus 283 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 362 (1031)
...+ .+ .++|+.|+|++|.+++ +..++. +++|++|+|++|.+++..|..|+
T Consensus 225 ~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~------------------------l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 225 VVRG-PV--NVELTILKLQHNNLTD--TAWLLN------------------------YPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp EEEC-SC--CSCCCEEECCSSCCCC--CGGGGG------------------------CTTCSEEECCSSCCCEEESGGGT
T ss_pred cccc-cc--CCCCCEEECCCCCCCC--Chhhcc------------------------CCCCCEEECCCCccCCCCHHHhc
Confidence 4322 22 2466677777766664 234444 44555555555555544444555
Q ss_pred cccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCee
Q 043316 363 YLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFL 442 (1031)
Q Consensus 363 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 442 (1031)
.+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+.. +|..+..+++|++|++++|.+.+++ +..+++|+.|
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L 350 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNL 350 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEE
T ss_pred CccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEE
Confidence 55555555555555543 23344445555555555555553 2344455555666666666555443 4556778888
Q ss_pred ccccccccCcc
Q 043316 443 DLSQNNLYGEI 453 (1031)
Q Consensus 443 ~Ls~N~l~~~~ 453 (1031)
++++|++.+..
T Consensus 351 ~l~~N~~~~~~ 361 (597)
T 3oja_B 351 TLSHNDWDCNS 361 (597)
T ss_dssp ECCSSCEEHHH
T ss_pred EeeCCCCCChh
Confidence 88888877643
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=352.23 Aligned_cols=254 Identities=10% Similarity=0.017 Sum_probs=182.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHH---HHHhcCCCCceeeee-------ee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEV---LALTEIRHRNIIKFH-------GF 827 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei---~~l~~l~h~niv~l~-------~~ 827 (1031)
.+|.+.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|+ ..++. +||||++++ ++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 4588999999999999999965 57999999999775421 233456777884 45555 799988755 44
Q ss_pred EecC-----------------CeeEEEEEeccCCCchhhcccCCccccCCHHHH------HHHHHHHHHHHHHhhhCCCC
Q 043316 828 CSNA-----------------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR------MNVIKGVANALSYLHHDCLP 884 (1031)
Q Consensus 828 ~~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~ 884 (1031)
+... ...++||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 4433 33799999998 899999986532 2344555 67889999999999999
Q ss_pred CeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCC
Q 043316 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGN 962 (1031)
Q Consensus 885 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~ 962 (1031)
||+||||||+||+++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999987642 2224567799999999987 67999999999999999999999
Q ss_pred CCCCCcCccchhhhhhHH-HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 963 HPRDYVSTNFSSFSNMIT-EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 963 ~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.||............... ..........+... .....+.+++.+||+.||++|||+.|+++
T Consensus 291 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 291 LPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCT----PLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSS----CCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCcCcccccchhhhhhhhccccccchhhcc----CCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 998765432111111000 00000011111100 11236778999999999999999999864
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=353.18 Aligned_cols=198 Identities=22% Similarity=0.257 Sum_probs=171.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC------CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI------RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l------~h~niv~l~~~~~~~ 831 (1031)
.+|++.+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|+.+++.+ +|+||+++++++...
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 5699999999999999999954 568999999997542 2345666777777666 578999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc--eEEecc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE--AHVSDF 909 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Df 909 (1031)
+..++||||+. ++|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 99999999996 68999887654 23589999999999999999999999 9999999999999999987 999999
Q ss_pred ccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 247 G~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 247 GSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 999865432 234678999999999999999999999999999999999999987554
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=332.84 Aligned_cols=255 Identities=24% Similarity=0.321 Sum_probs=204.8
Q ss_pred HHHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 755 IKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 755 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
....++|++.+.||+|+||.||+|... +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS 95 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB--SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc--chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence 344578999999999999999999664 799999999876432 23457789999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceEEeccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFG 910 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg 910 (1031)
.++|+||+++++|.+++.... .+++.+++.++.|++.||+|||+. ||+||||||+||+++.+ +.+||+|||
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEEEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccC
Confidence 999999999999999886543 588999999999999999999999 99999999999999764 469999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++....... ......+++.|+|||++.+ .++.++||||+|+++|+|++|+.||...... ... ..+... ..
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~---~~~~~~---~~ 239 (287)
T 2wei_A 170 LSTCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DIL---KRVETG---KY 239 (287)
T ss_dssp GGGTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHHC---CC
T ss_pred cceeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHH---HHHHcC---CC
Confidence 998765432 2344568999999999876 5899999999999999999999998654321 111 111111 11
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1111111112236788999999999999999999986
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-37 Score=347.45 Aligned_cols=270 Identities=18% Similarity=0.234 Sum_probs=199.1
Q ss_pred cHHHHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhh-------hhhcHHHHHHHHHHHhcCCCCcee
Q 043316 750 LYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFD-------EMADQDEFLNEVLALTEIRHRNII 822 (1031)
Q Consensus 750 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~~Ei~~l~~l~h~niv 822 (1031)
...++....++|.+.+.||+|+||.||+|...+++.||||++....... +....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4556677789999999999999999999988889999999986543211 122347899999999999999999
Q ss_pred eeeeeEec-----CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCee
Q 043316 823 KFHGFCSN-----AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897 (1031)
Q Consensus 823 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 897 (1031)
++++++.. ....++||||++ |+|.+++.... ..+++..+..++.||+.||+|||+. ||+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999843 346899999998 58888876542 3589999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhh
Q 043316 898 LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 898 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~ 976 (1031)
++.++.+||+|||++...... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~ 244 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLN 244 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH
T ss_pred EcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHH
Confidence 999999999999999865432 23345678999999999877 678999999999999999999999987543211 111
Q ss_pred hhHHHh----------------hh---hcCCCCCCCChh--HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 977 NMITEI----------------NQ---NLDHRLPTPSRD--VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 977 ~~~~~~----------------~~---~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...... .. ......+..... .......+.+++.+||+.||++|||+.|+++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 110000 00 000011110000 0011235789999999999999999999985
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=344.67 Aligned_cols=257 Identities=21% Similarity=0.295 Sum_probs=198.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----Q 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~ 832 (1031)
.+|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++... .
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 5799999999999999999954 578999999987532 233457889999999999999999999999654 4
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++||||++ ++|.++++.. .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 6899999997 5899988653 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH-------
Q 043316 913 KFLNPHSS---NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE------- 981 (1031)
Q Consensus 913 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~------- 981 (1031)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQE 254 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHH
Confidence 87643322 1345678999999998654 458999999999999999999999987554321 11111000
Q ss_pred ------------hhhhcCCCCCCCC-hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 ------------INQNLDHRLPTPS-RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ------------~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............. .........+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000000 000011236789999999999999999999985
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=334.16 Aligned_cols=251 Identities=24% Similarity=0.406 Sum_probs=191.7
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----- 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----- 830 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence 356899999999999999999965 57999999998643 2346788999999999999999999998854
Q ss_pred --------CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC
Q 043316 831 --------AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902 (1031)
Q Consensus 831 --------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1031)
.+..++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTS
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCC
Confidence 457899999999999999997643 3567889999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCC--------------CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCC
Q 043316 903 EAHVSDFGIAKFLNPHS--------------SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDY 967 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~ 967 (1031)
.+||+|||++....... .......|++.|+|||++.+. .++.++||||+||++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 99999999998764321 122345689999999998764 68999999999999999998 4432
Q ss_pred cCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... ......+... ....+.... ......+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~----~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 231 GMER----VNILKKLRSV-SIEFPPDFD--DNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHH----HHHHHHHHST-TCCCCTTCC--TTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhH----HHHHHhcccc-ccccCcccc--ccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 2111 1111111111 111111111 112235678999999999999999999986
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=340.52 Aligned_cols=284 Identities=20% Similarity=0.249 Sum_probs=162.9
Q ss_pred cCCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCC
Q 043316 22 SSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFP 101 (1031)
Q Consensus 22 ~~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~ 101 (1031)
+++..+|++||++||+++.. ++ .+++++|... +..+.++|.|.|++|+.... .+. -...+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~-~~-~~~~~~w~~~--~~~~~~~~~~~g~~~~~~~~-------------~l~---~~~~~ 81 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNA-DR-NRWHSAWRQA--NSNNPQIETRTGRALKATAD-------------LLE---DATQP 81 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHH-CC-TTHHHHHHHH--TTTCTTSCCSHHHHHHHHHH-------------HHH---HHTST
T ss_pred cccCchHHHHHHHHHHhccC-Cc-hhhhhhhccc--ccccccccccCCcchhhhHH-------------HHh---ccccc
Confidence 34667899999999999852 33 5678899310 11456899999999953100 000 01123
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
++++|+|++|.++ .+|+.++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 4444455555544 44545555555555555555554 44555555555555555555554 445555555555555555
Q ss_pred CcccCCCCCCcccc---------cccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEe
Q 043316 182 HNNFSGRIPPSLGN---------LSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYL 252 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~---------l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 252 (1031)
+|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|+|
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDL 236 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEEC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEEC
Confidence 55555555544433 566666666666655 55555666666666666666665 34445556666666666
Q ss_pred ecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccC
Q 043316 253 YKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD 330 (1031)
Q Consensus 253 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 330 (1031)
++|.+.+.+|..++++++|++|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..++++++|+.+++..+.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 666666666666666666666666666665566666666666666666666666666666666666666655554443
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-37 Score=352.61 Aligned_cols=201 Identities=21% Similarity=0.342 Sum_probs=155.9
Q ss_pred hccCc-cceeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe--cCC
Q 043316 759 DDFGE-KYCIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS--NAQ 832 (1031)
Q Consensus 759 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~--~~~ 832 (1031)
+.|++ +++||+|+||+||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++++++. ...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 45665 568999999999999754 57899999997543 2346789999999999999999999994 477
Q ss_pred eeEEEEEeccCCCchhhcccCC------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee----CCCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL----DSEH 902 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~ 902 (1031)
..++||||++ ++|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 8999999997 47877775322 122488999999999999999999999 99999999999999 6778
Q ss_pred ceEEeccccccccCCCC---CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 903 EAHVSDFGIAKFLNPHS---SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
.+||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999998765322 223456789999999998874 58999999999999999999999986443
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=349.14 Aligned_cols=256 Identities=21% Similarity=0.237 Sum_probs=192.6
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ------ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~------ 832 (1031)
.+|++.+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~--------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR--------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc--------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 56999999999999999999887777799998855321 1237999999999999999999995443
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-CCCceEEecccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-SEHEAHVSDFGI 911 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~ 911 (1031)
..++||||++++.+............+++..+..++.||++||+|||+. ||+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 3789999998754443332222234688999999999999999999999 999999999999999 799999999999
Q ss_pred ccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT---------- 980 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~---------- 980 (1031)
++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||....... .......
T Consensus 189 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 189 AKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQI 266 (394)
T ss_dssp CEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHH
T ss_pred cccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 98764332 23456789999999998765 58999999999999999999999987554321 1111111
Q ss_pred -Hhhh-hcCCCCCCCCh-hHHH-----HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 -EINQ-NLDHRLPTPSR-DVMD-----KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 -~~~~-~~~~~~~~~~~-~~~~-----~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... .....++.... .... ...++.+++.+||+.||++|||+.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000 01111111000 0000 1236789999999999999999999975
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=341.92 Aligned_cols=254 Identities=23% Similarity=0.389 Sum_probs=198.6
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||.||+|.... .||+|+++.... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERD--NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSC--CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCC--CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 4678999999999999999997743 499999876432 222345677899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++ ++.+||+|||++.....
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999999997653 3588899999999999999999999 999999999999998 78999999999876532
Q ss_pred C-----CCCceeeccccCccccccccc---------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 918 H-----SSNWTAFAGTFGYAAPEIAHM---------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 918 ~-----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
. ........|++.|+|||++.+ ..++.++||||+||++|||++|+.||...... .......
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~ 256 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-----AIIWQMG 256 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-----HHHHHHH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHhc
Confidence 1 122334568999999999874 34788999999999999999999998654331 1111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+..... .....+.+++.+||+.||++|||+.|+++.|++
T Consensus 257 ~~~~~~~~~~-----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 299 (319)
T 2y4i_B 257 TGMKPNLSQI-----GMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299 (319)
T ss_dssp TTCCCCCCCS-----SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTT
T ss_pred cCCCCCCCcC-----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 2222221111 011257788999999999999999999999874
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=345.65 Aligned_cols=265 Identities=20% Similarity=0.221 Sum_probs=187.6
Q ss_pred HHHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec
Q 043316 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN 830 (1031)
Q Consensus 752 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 830 (1031)
+......++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+|++.++.++||||+++++++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-----TCCCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-----cccHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 44567789999999999999999999965 579999999985532 223456678888888999999999999865
Q ss_pred CCe-------eEEEEEeccCCCchhhccc-CCccccCCHHHHHHHHHHHHHHHHHhh--hCCCCCeeeCCCCCCCeeeCC
Q 043316 831 AQH-------SFIVSEYLDRGSLTTILKD-DAAAKEFGWNQRMNVIKGVANALSYLH--HDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 831 ~~~-------~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
.+. .++||||+++ ++.+.+.. ......+++..+..++.|++.|++||| +. ||+||||||+||+++.
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNE 166 (360)
T ss_dssp ECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEET
T ss_pred cccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeC
Confidence 433 7899999986 44443332 122345788999999999999999999 77 9999999999999997
Q ss_pred -CCceEEeccccccccCCCCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhh
Q 043316 901 -EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978 (1031)
Q Consensus 901 -~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~ 978 (1031)
++.+||+|||+++...... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||....... .....
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~ 244 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEI 244 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred CCCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHH
Confidence 8999999999998765432 234567899999999987654 8999999999999999999999987544321 11111
Q ss_pred HHHh-------hhhcCCCCCC------CChhH--------HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 979 ITEI-------NQNLDHRLPT------PSRDV--------MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 979 ~~~~-------~~~~~~~~~~------~~~~~--------~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... .....+.... ..... ......+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1100 0000000000 00000 012346889999999999999999999975
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=355.41 Aligned_cols=254 Identities=17% Similarity=0.252 Sum_probs=201.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC-CceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~~~~~~~~~~~l 836 (1031)
++|.+.++||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++.++| +++..+..++.+.+..++
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~------~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT------KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC------SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc------ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 6799999999999999999964 679999999876543 22347789999999986 566677777788889999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
||||+ +++|.+++.... ..+++.+++.++.||+.||+|||++ +||||||||+||++ +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 899999997542 3589999999999999999999999 99999999999999 588999999999998
Q ss_pred ccCCCCCC-------ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch--hhhhhHHHhhh
Q 043316 914 FLNPHSSN-------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS--SFSNMITEINQ 984 (1031)
Q Consensus 914 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~--~~~~~~~~~~~ 984 (1031)
.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-- 232 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-- 232 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH--
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc--
Confidence 76543321 2256799999999999999999999999999999999999999876543211 111111110
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...... ........++.+++..||+.||++||++++|++.|+
T Consensus 233 -~~~~~~---~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 233 -VATSIE---ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp -HHSCHH---HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred -ccccHH---HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 000000 000011236788999999999999999999999886
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=336.48 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=196.9
Q ss_pred HHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC--CCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR--HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++.+++..
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 3467999999999999999999888899999999865432 2335678899999999997 59999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||| +.+++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||++..
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeecccccc
Confidence 99999 56789999998653 578899999999999999999999 999999999999996 58999999999987
Q ss_pred cCCCCC--CceeeccccCccccccccc-----------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH
Q 043316 915 LNPHSS--NWTAFAGTFGYAAPEIAHM-----------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 915 ~~~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~ 981 (1031)
...... ......|++.|+|||++.+ ..++.++||||+||++|||++|+.||........... ..
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~---~~ 252 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH---AI 252 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH---HH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH---HH
Confidence 654322 1234578999999999865 4678899999999999999999999875443221111 11
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+... ...+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 253 IDPNHEIEFPDIP------EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HCTTSCCCCCCCS------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhcccccCCcccc------hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1111111222211 135778899999999999999999985
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=345.59 Aligned_cols=257 Identities=23% Similarity=0.255 Sum_probs=193.1
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----- 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----- 830 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++..... ...+|+++++.++||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 456899999999999999999954 6899999999865421 12379999999999999999999843
Q ss_pred ---------------------------------CCeeEEEEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHH
Q 043316 831 ---------------------------------AQHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALS 876 (1031)
Q Consensus 831 ---------------------------------~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~ 876 (1031)
....++||||++ ++|.+.+... .....+++..+..++.||++||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 334889999998 5777777542 12345889999999999999999
Q ss_pred HhhhCCCCCeeeCCCCCCCeeeC-CCCceEEeccccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHH
Q 043316 877 YLHHDCLPPIVHGDISSKNVLLD-SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVL 954 (1031)
Q Consensus 877 ~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~i 954 (1031)
|||+. ||+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||++.+. .++.++||||+||+
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 99999 999999999999998 68899999999998765432 33456789999999998775 48999999999999
Q ss_pred HHHHHhCCCCCCCcCccchhhhhhHHHh-----------hhh-cCCCCCCCC-hhHHH-----HHHHHHHHHHhhccCCC
Q 043316 955 ALEVIKGNHPRDYVSTNFSSFSNMITEI-----------NQN-LDHRLPTPS-RDVMD-----KLMSIMEVAILCLVESP 1016 (1031)
Q Consensus 955 l~elltG~~P~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~-~~~~~-----~~~~l~~li~~cl~~dP 1016 (1031)
+|||++|+.||....... .....+... ... ....++... ..... ....+.+++.+||+.||
T Consensus 232 l~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 232 FGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 999999999987544321 111111100 000 000011000 00000 12357899999999999
Q ss_pred CCCCCHHHHHH
Q 043316 1017 EARPTMKKVCN 1027 (1031)
Q Consensus 1017 ~~Rps~~evl~ 1027 (1031)
++|||+.|+++
T Consensus 311 ~~R~t~~e~l~ 321 (383)
T 3eb0_A 311 DLRINPYEAMA 321 (383)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999999974
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=343.20 Aligned_cols=254 Identities=20% Similarity=0.275 Sum_probs=195.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee---
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS--- 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~--- 834 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc--chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 5789999999999999999954 5799999999976432 223467889999999999999999999999877655
Q ss_pred ---EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 835 ---FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 835 ---~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
++||||++ ++|.+++.. .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 588887743 388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT---------- 980 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~---------- 980 (1031)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .......
T Consensus 191 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 191 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFV 266 (371)
T ss_dssp C-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHH
T ss_pred ccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHH
Confidence 9865432 345678999999999887 678999999999999999999999987543211 1111100
Q ss_pred ---------HhhhhcCCCCCCCC-hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 ---------EINQNLDHRLPTPS-RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 ---------~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............. .........+.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00000111100000 000011346789999999999999999999975
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=348.98 Aligned_cols=257 Identities=21% Similarity=0.231 Sum_probs=197.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC--------CCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR--------HRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--------h~niv~l~~~~~ 829 (1031)
++|++.++||+|+||+||+|+. .+++.||||+++... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-----HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-----cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 6799999999999999999954 578999999987532 34567889999999885 788999999997
Q ss_pred ----cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---
Q 043316 830 ----NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH--- 902 (1031)
Q Consensus 830 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 902 (1031)
.....++||||+. +++.+++.... ...+++..++.++.||+.||+|||+++ ||+||||||+||+++.++
T Consensus 112 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 112 ISGVNGTHICMVFEVLG-HHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEETTEEEEEEEECCCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ecCCCCceEEEEEeccC-ccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 5668899999994 56656554432 245899999999999999999999864 899999999999999775
Q ss_pred ----------------------------------------------ceEEeccccccccCCCCCCceeeccccCcccccc
Q 043316 903 ----------------------------------------------EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936 (1031)
Q Consensus 903 ----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~ 936 (1031)
.+||+|||++...... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999876432 345678999999999
Q ss_pred ccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-hhhhHHHhhhhcCC--------------------------C
Q 043316 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-FSNMITEINQNLDH--------------------------R 989 (1031)
Q Consensus 937 ~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~~~~~~--------------------------~ 989 (1031)
+.+..++.++||||+||++|||+||+.||......... .......+...... .
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 99989999999999999999999999998754432110 00000000000000 0
Q ss_pred CCCC---------ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 990 LPTP---------SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 990 ~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... ..........+.+++.+||+.||++|||++|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0000 0001233457889999999999999999999985
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=335.22 Aligned_cols=256 Identities=18% Similarity=0.257 Sum_probs=190.3
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe--------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS-------- 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~-------- 829 (1031)
++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC----hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 57899999999999999999664 58999999986532 345678899999999999999999999873
Q ss_pred ------cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-CCC
Q 043316 830 ------NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-SEH 902 (1031)
Q Consensus 830 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 902 (1031)
+....++||||++ |+|.+++... .+++..++.++.|++.||+|||++ ||+||||||+||+++ .++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 4467899999998 6999998653 478899999999999999999999 999999999999997 567
Q ss_pred ceEEeccccccccCCCC---CCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhh
Q 043316 903 EAHVSDFGIAKFLNPHS---SNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~ 978 (1031)
.+||+|||+++...... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... .....
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~ 237 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLI 237 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 99999999998764321 12234567899999998765 678999999999999999999999987554311 11100
Q ss_pred HHH-----------h--------hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 979 ITE-----------I--------NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 979 ~~~-----------~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... . .....................+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000 0 000000000000000011346789999999999999999999975
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=346.76 Aligned_cols=255 Identities=23% Similarity=0.285 Sum_probs=191.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------ 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 831 (1031)
.+|+..+.||+|+||.||+|+. .+++.||||++.... ..+.+|++++++++||||+++++++...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 4688999999999999999966 469999999986532 1123799999999999999999998432
Q ss_pred CeeEEEEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEecc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDF 909 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Df 909 (1031)
...++||||+++ ++.+.+... .....+++..+..++.||++||+|||++ ||+||||||+||+++.+ +.+||+||
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccc
Confidence 236799999986 565555432 1234689999999999999999999999 99999999999999965 56899999
Q ss_pred ccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh-----
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN----- 983 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~----- 983 (1031)
|+++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+...+....
T Consensus 202 G~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 202 GSAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 279 (420)
T ss_dssp TTCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHH
T ss_pred hhhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHH
Confidence 9998764332 23456789999999998764 6899999999999999999999998754431 11111111000
Q ss_pred --hhcCC-----CCCCCCh-hHH-----HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 --QNLDH-----RLPTPSR-DVM-----DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 --~~~~~-----~~~~~~~-~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+ .++.... .+. ....++.+++.+||+.||++|||+.|+++
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00000 1111000 000 11246789999999999999999999975
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=348.29 Aligned_cols=249 Identities=24% Similarity=0.309 Sum_probs=186.4
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+++..++||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 35556889999999998876678999999998653 244678999999876 8999999999999999999999
Q ss_pred EeccCCCchhhcccCCcccc----CCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-------------
Q 043316 839 EYLDRGSLTTILKDDAAAKE----FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE------------- 901 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~----l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------------- 901 (1031)
||++ |+|.+++........ .++..++.++.||+.||+|||++ ||+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 699999976532211 13445678999999999999999 99999999999999754
Q ss_pred CceEEeccccccccCCCCCC----ceeeccccCccccccccc-------cCCCccccchhhhHHHHHHHh-CCCCCCCcC
Q 043316 902 HEAHVSDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHM-------MRATEKYDVHSFGVLALEVIK-GNHPRDYVS 969 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~ellt-G~~P~~~~~ 969 (1031)
+.+||+|||+++........ .....||+.|+|||++.+ ..++.++||||+||++|||+| |+.||+...
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 47999999999987543221 234579999999999875 568999999999999999999 999986443
Q ss_pred ccchhhhhhHHHhhhhcCC-CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 970 TNFSSFSNMITEINQNLDH-RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... .... ...... .... ........++.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~---~~i~---~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 SRE---SNII---RGIFSLDEMKC--LHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp THH---HHHH---HTCCCCCCCTT--CCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhH---HHHh---cCCCCcccccc--cccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 211 1111 111111 1111 111233457889999999999999999999975
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-36 Score=363.19 Aligned_cols=253 Identities=23% Similarity=0.381 Sum_probs=201.2
Q ss_pred HhccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.+.||+|+||.||+|... .+..||||+++... .....+.+.+|+.++++++||||+++++++.+ +.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~ 464 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP 464 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc
Confidence 467999999999999999999653 25679999986532 22345789999999999999999999999854 56
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++|+|.++++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 899999999999999997543 3578999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 914 FLNPHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 914 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
....... ......+|+.|+|||++.+..++.++||||+||++|||++ |..||...... .....+........+
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~ 614 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMP 614 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHHTCCCCCC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHcCCCCCCC
Confidence 7644322 1233456789999999998899999999999999999997 99998754331 111222221111222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 615 ~~------~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 615 PN------CPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp TT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cc------ccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11 1236778999999999999999999999886
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=340.78 Aligned_cols=256 Identities=22% Similarity=0.291 Sum_probs=196.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----Q 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~ 832 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++.... .......+.+|+.++++++||||+++++++... .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc---cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 6799999999999999999965 479999999986432 233466788999999999999999999988654 6
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++||||++ ++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 7899999997 5899888753 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----------CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH
Q 043316 913 KFLNPHSS----------NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 913 ~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~ 981 (1031)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~ 238 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGI 238 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHH
Confidence 87643221 1223568999999998764 678999999999999999999999987554211 00000000
Q ss_pred --------------------hhhhcCCCCCCCCh--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 --------------------INQNLDHRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 --------------------~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...... ..+.... ........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLP-MYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSC-CCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCchhccccccccchhhHHhhccc-CCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0000000 00011235778999999999999999999986
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=337.98 Aligned_cols=262 Identities=22% Similarity=0.291 Sum_probs=199.2
Q ss_pred HHhccCccceeecCCCccEEEEEe--CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC---CCCceeeeeeeEe--
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL--PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI---RHRNIIKFHGFCS-- 829 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~-- 829 (1031)
+.++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 347899999999999999999976 468899999987543211 1233456777776655 8999999999987
Q ss_pred ---cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 830 ---NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 830 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
.....++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 5677899999998 699999876532 3488999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
+|||++...... .......+++.|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 162 ~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~ 239 (326)
T 1blx_A 162 ADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPG 239 (326)
T ss_dssp CSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCC
T ss_pred ecCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCC
Confidence 999999876432 2234567899999999999989999999999999999999999998754431 11111111110000
Q ss_pred CCCC---------------CCC-ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 DHRL---------------PTP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ~~~~---------------~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+ ... ..........+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 000 0000111235778999999999999999999985
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-36 Score=337.63 Aligned_cols=254 Identities=20% Similarity=0.269 Sum_probs=194.5
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH---- 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~---- 833 (1031)
++|.+.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 5688999999999999999965 5799999999976432 22346778999999999999999999999987654
Q ss_pred --eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 834 --SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 834 --~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
.++||||++ ++|.+++.. .+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 588888753 378899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH---------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE--------- 981 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~--------- 981 (1031)
+...... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFV 248 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHH
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 9865432 345678999999999877 678999999999999999999999987543211 11110000
Q ss_pred ----------hhhhcCCCC-CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 ----------INQNLDHRL-PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ----------~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... .............+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000 0000001112346788999999999999999999975
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-36 Score=335.32 Aligned_cols=254 Identities=19% Similarity=0.242 Sum_probs=199.3
Q ss_pred hccCccceeecCCCccEEEEEe--CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCC------ceeeeeeeEec
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL--PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR------NIIKFHGFCSN 830 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~------niv~l~~~~~~ 830 (1031)
++|++.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.+++.++|+ +++++++++.+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-----RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-----HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-----chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 5799999999999999999965 468999999986532 2356778899888888654 59999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC----------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---------- 900 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---------- 900 (1031)
.+..++||||+ +++|.+++.... ...+++.++..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 99999999999 889999997653 23578999999999999999999999 9999999999999987
Q ss_pred ---------CCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 901 ---------EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 901 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999875432 24467899999999999989999999999999999999999998754432
Q ss_pred chhhhhhHHHhhhhcCC-----------------CCCCC-----------------ChhHHHHHHHHHHHHHhhccCCCC
Q 043316 972 FSSFSNMITEINQNLDH-----------------RLPTP-----------------SRDVMDKLMSIMEVAILCLVESPE 1017 (1031)
Q Consensus 972 ~~~~~~~~~~~~~~~~~-----------------~~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~ 1017 (1031)
. ....+.......+. .+... ..........+.+++.+||+.||+
T Consensus 241 ~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 241 E--HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp H--HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred H--HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 1 11111111000000 00000 000012234688999999999999
Q ss_pred CCCCHHHHHH
Q 043316 1018 ARPTMKKVCN 1027 (1031)
Q Consensus 1018 ~Rps~~evl~ 1027 (1031)
+|||++|+++
T Consensus 319 ~Rpt~~ell~ 328 (339)
T 1z57_A 319 KRITLREALK 328 (339)
T ss_dssp TSCCHHHHTT
T ss_pred cccCHHHHhc
Confidence 9999999975
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=336.63 Aligned_cols=256 Identities=25% Similarity=0.323 Sum_probs=176.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHH-HHhcCCCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVL-ALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++..... ......+.+|+. +++.++||||+++++++.+++..++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 5788999999999999999965 5799999999976431 223445666666 6778899999999999999999999
Q ss_pred EEEeccCCCchhhcccC--CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDD--AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
||||+++ +|.+++... .....+++..+..++.|++.||+|||+.. ||+||||||+||+++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999985 787777531 11245889999999999999999999852 899999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCccccccc----cccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIA----HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
..... ......|++.|+|||++ .+..++.++||||+||++|||++|+.||............ ......+.+
T Consensus 176 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~~~~~~ 250 (327)
T 3aln_A 176 LVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ----VVKGDPPQL 250 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CC----CCCSCCCCC
T ss_pred ccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHH----HhcCCCCCC
Confidence 64332 23345789999999998 4567899999999999999999999998754332111111 111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 251 SNSEE--REFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCSS--CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCccc--ccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11000 011236788999999999999999999875
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=335.99 Aligned_cols=244 Identities=22% Similarity=0.339 Sum_probs=198.3
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhh--hhhcHHHHHHHHHHHhcCC--CCceeeeeeeEecCC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFD--EMADQDEFLNEVLALTEIR--HRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~ 832 (1031)
.++|++.+.||+|+||.||+|. ..+++.||||++....... +....+.+.+|+.++++++ ||||+++++++.+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 4679999999999999999995 4678999999997654321 1112345678999999996 599999999999999
Q ss_pred eeEEEEEeccC-CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-CCCceEEeccc
Q 043316 833 HSFIVSEYLDR-GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-SEHEAHVSDFG 910 (1031)
Q Consensus 833 ~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg 910 (1031)
..++|+|++.+ ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999986 8999999764 3588899999999999999999999 999999999999999 78899999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
++...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||+.... ...........
T Consensus 196 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~~~~~~~~~~ 265 (320)
T 3a99_A 196 SGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------IIRGQVFFRQR 265 (320)
T ss_dssp TCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HHHCCCCCSSC
T ss_pred cccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------hhccccccccc
Confidence 99876532 2345678999999999887665 7889999999999999999999864321 00000011111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...++.+++.+||+.||++|||++|+++
T Consensus 266 ----------~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 266 ----------VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ----------CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----------CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1135778999999999999999999986
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=335.99 Aligned_cols=252 Identities=20% Similarity=0.263 Sum_probs=170.5
Q ss_pred HhccCccc-eeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----C
Q 043316 758 IDDFGEKY-CIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----A 831 (1031)
Q Consensus 758 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~ 831 (1031)
.++|.+.+ .||+|+||+||+|... +++.||||++.... ... .+....++.++||||+++++++.. +
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KAR---QEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHH---HHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 36788854 6999999999999654 79999999986532 111 122233566789999999999876 4
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceEEec
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSD 908 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~D 908 (1031)
...++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.+ +.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 55899999999999999998653 24589999999999999999999999 99999999999999864 4599999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
||++...... ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.......... .......... .
T Consensus 175 fg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~-~ 250 (336)
T 3fhr_A 175 FGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-GMKRRIRLGQ-Y 250 (336)
T ss_dssp CTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-hHHHhhhccc-c
Confidence 9999876432 2345678999999999988889999999999999999999999986443321100 0000110000 0
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+. .........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 251 GFPN--PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CCCT--TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccCc--hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0110 000112235778999999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=345.13 Aligned_cols=247 Identities=23% Similarity=0.290 Sum_probs=186.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+|...++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+....|+|
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 46888999999999997766666899999999865431 1245899999999 799999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-----CceEEeccccc
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-----HEAHVSDFGIA 912 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~Dfg~a 912 (1031)
|||++ |+|.+++..... ...+.++..++.||+.||+|||+. +|+||||||+||+++.+ ..+||+|||++
T Consensus 97 ~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 99996 599999976542 344456789999999999999999 99999999999999532 35889999999
Q ss_pred cccCCCC---CCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhh
Q 043316 913 KFLNPHS---SNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 913 ~~~~~~~---~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
+...... .......||+.|+|||++. +..++.++||||+||++|||++ |..||...... ........
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------~~~~~~~~ 244 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------QANILLGA 244 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH------HHHHHTTC
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH------HHHHHhcc
Confidence 8765332 2234567999999999987 4567889999999999999999 89997533221 11111111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ .......+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 CSLDCLHP---EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCTTSCT---TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCccccCc---cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 11111111 1122335778999999999999999999984
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=340.32 Aligned_cols=201 Identities=23% Similarity=0.259 Sum_probs=170.3
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CC-----ceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HR-----NIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~-----niv~l~~~~~~ 830 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||+++... .....+.+|+.+++.++ |+ +|+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-----HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 46899999999999999999965 478999999997532 23456778888887774 44 49999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC--CCCceEEec
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD--SEHEAHVSD 908 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~D 908 (1031)
.+..++||||++ ++|.+++.... ...+++..+..++.|++.||+|||++ ..||+||||||+||+++ .++.+||+|
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 999999999996 59999997653 23588999999999999999999952 12999999999999995 477899999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
||+++..... .....||+.|+|||++.+..++.++||||+||++|||+||+.||....
T Consensus 205 FG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 205 FGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999876432 345678999999999999999999999999999999999999987544
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=329.67 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=180.7
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+.++..+++.++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH--HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc--hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 46799999999999999999966 47999999999764321 1223444555567888899999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||+ ++.+..+.... ...+++..+..++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 99999 45555554432 2358899999999999999999998 6 8999999999999999999999999999866
Q ss_pred CCCCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
... .......+++.|+|||++. +..++.++||||+||++|||++|+.||.......... ........+..
T Consensus 176 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~ 250 (318)
T 2dyl_A 176 VDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL----TKVLQEEPPLL 250 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH----HHHHHSCCCCC
T ss_pred cCC-ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH----HHHhccCCCCC
Confidence 432 2234557899999999984 4568899999999999999999999987543322211 12222222222
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+... .....+.+++.+||+.||.+|||++|+++
T Consensus 251 ~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 251 PGHM----GFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CSSS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CccC----CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 2111 11235778899999999999999999875
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=359.42 Aligned_cols=260 Identities=22% Similarity=0.293 Sum_probs=198.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec------
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN------ 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------ 830 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 46899999999999999999965 579999999987642 23346789999999999999999999999765
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEe
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVS 907 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 907 (1031)
++..++||||+++|+|.+++........+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 677899999999999999998765545688899999999999999999999 9999999999999997765 9999
Q ss_pred ccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH--------
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI-------- 979 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~-------- 979 (1031)
|||.+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .+....
T Consensus 167 DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-~~~~~i~~~~~~~~ 244 (676)
T 3qa8_A 167 DLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-QWHGKVREKSNEHI 244 (676)
T ss_dssp SCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-HSSTTCC------C
T ss_pred cccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-hhhhhhhcccchhh
Confidence 999999775432 3355688999999999999999999999999999999999999986432110 000000
Q ss_pred -----HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 043316 980 -----TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025 (1031)
Q Consensus 980 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 1025 (1031)
......+....+.+..........+.+++.+||+.||++|||++|+
T Consensus 245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000001111111111111233468899999999999999999774
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-36 Score=331.75 Aligned_cols=246 Identities=22% Similarity=0.333 Sum_probs=190.9
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcC----CCCceeeeeeeE
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEI----RHRNIIKFHGFC 828 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l----~h~niv~l~~~~ 828 (1031)
...++|.+.+.||+|+||.||+|.. .+++.||||++........ ......+.+|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3457899999999999999999965 5789999999976542211 12234456788888888 899999999999
Q ss_pred ecCCeeEEEEEe-ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-CCCceEE
Q 043316 829 SNAQHSFIVSEY-LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-SEHEAHV 906 (1031)
Q Consensus 829 ~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl 906 (1031)
.+.+..++|+|| +.+++|.+++.... .+++..++.++.||+.||+|||+. ||+||||||+||+++ .++.+||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 999999999999 78999999997643 488999999999999999999999 999999999999999 7899999
Q ss_pred eccccccccCCCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
+|||++...... ......|+..|+|||++.+..+ +.++||||+||++|||++|+.||..... ... .
T Consensus 182 ~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~---~ 248 (312)
T 2iwi_A 182 IDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------ILE---A 248 (312)
T ss_dssp CCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HHH---T
T ss_pred EEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------Hhh---h
Confidence 999999876532 2345678999999999887666 4589999999999999999999763321 010 0
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.. ....+.+++.+||+.||++|||++|+++
T Consensus 249 -~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 249 -ELHFPAH------VSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -CCCCCTT------SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -ccCCccc------CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111 1235778899999999999999999986
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=338.22 Aligned_cols=256 Identities=20% Similarity=0.252 Sum_probs=195.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-----------CCceeeeee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-----------HRNIIKFHG 826 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----------h~niv~l~~ 826 (1031)
++|.+.+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|+.++++++ ||||+++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 5799999999999999999965 579999999987532 23566788999988876 899999999
Q ss_pred eEecCC----eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---
Q 043316 827 FCSNAQ----HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD--- 899 (1031)
Q Consensus 827 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--- 899 (1031)
++...+ ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+++ ||+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 997654 789999999 889999997643 234889999999999999999999953 899999999999994
Q ss_pred ---CCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc----
Q 043316 900 ---SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF---- 972 (1031)
Q Consensus 900 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~---- 972 (1031)
..+.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||+||+.||.......
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4447999999999876432 244578999999999999899999999999999999999999987543211
Q ss_pred -hhhhhhHHHhhhhcC--------------------CCCCCC---C---------hhHHHHHHHHHHHHHhhccCCCCCC
Q 043316 973 -SSFSNMITEINQNLD--------------------HRLPTP---S---------RDVMDKLMSIMEVAILCLVESPEAR 1019 (1031)
Q Consensus 973 -~~~~~~~~~~~~~~~--------------------~~~~~~---~---------~~~~~~~~~l~~li~~cl~~dP~~R 1019 (1031)
.......... ...+ ..+... . .........+.+++.+||+.||++|
T Consensus 247 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 247 DDHIAQIIELL-GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHHHH-CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred HHHHHHHHHhc-CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 0111111000 0000 000000 0 0012334578899999999999999
Q ss_pred CCHHHHHH
Q 043316 1020 PTMKKVCN 1027 (1031)
Q Consensus 1020 ps~~evl~ 1027 (1031)
||++|+++
T Consensus 326 pt~~ell~ 333 (373)
T 1q8y_A 326 ADAGGLVN 333 (373)
T ss_dssp BCHHHHHT
T ss_pred CCHHHHhh
Confidence 99999986
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=335.40 Aligned_cols=254 Identities=19% Similarity=0.238 Sum_probs=195.9
Q ss_pred hccCccceeecCCCccEEEEEeC-CC-cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc------eeeeeeeEec
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SG-IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN------IIKFHGFCSN 830 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n------iv~l~~~~~~ 830 (1031)
++|++.+.||+|+||+||+|... ++ +.||||+++... ...+.+.+|+.++++++|++ ++.+++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-----KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-----cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 67999999999999999999653 44 789999986532 23567788999998887655 9999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee------------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL------------ 898 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll------------ 898 (1031)
.+..++||||+ ++++.+++.... ...+++.++..++.||+.||+|||++ ||+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 566766665543 23588999999999999999999999 99999999999999
Q ss_pred -------CCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 899 -------DSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 899 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999875432 24467899999999999989999999999999999999999998754432
Q ss_pred chhhhhhHHHhhhhcCC-----------------CCCCCC-----------------hhHHHHHHHHHHHHHhhccCCCC
Q 043316 972 FSSFSNMITEINQNLDH-----------------RLPTPS-----------------RDVMDKLMSIMEVAILCLVESPE 1017 (1031)
Q Consensus 972 ~~~~~~~~~~~~~~~~~-----------------~~~~~~-----------------~~~~~~~~~l~~li~~cl~~dP~ 1017 (1031)
. ....+.......+. .++... .........+.+++.+||+.||+
T Consensus 246 ~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 246 E--HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp H--HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred H--HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 1 11111111000000 000000 00011234688999999999999
Q ss_pred CCCCHHHHHH
Q 043316 1018 ARPTMKKVCN 1027 (1031)
Q Consensus 1018 ~Rps~~evl~ 1027 (1031)
+|||++|+++
T Consensus 324 ~Rpt~~e~l~ 333 (355)
T 2eu9_A 324 QRITLAEALL 333 (355)
T ss_dssp TSCCHHHHTT
T ss_pred hCcCHHHHhc
Confidence 9999999974
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=331.83 Aligned_cols=249 Identities=30% Similarity=0.459 Sum_probs=193.3
Q ss_pred CcccEEecCCCcCcC--CCccccccCCcCcEeeCCC-CcccCCCCccccccccceEEEeeccccCCCCCccccCcccCce
Q 043316 101 PHLMYLNLSCNVLYG--NIPPQISNLSKLRALDLGN-NQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINV 177 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~--~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 177 (1031)
.+++.|+|++|.++| .+|+.++++++|++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..|+++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578899999999998 8899999999999999994 8888889999999999999999999998888888888899999
Q ss_pred eeccCcccCCCCCCcccccccccEEEecccccccccCccccccc-ccccccccccccccccCccccccCcccEEEeecCc
Q 043316 178 LTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLN-SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
|+|++|.+++.+|..++++++|++|++++|++++.+|..+++++ +|++|+|++|++++.+|..+..++ |+.|+|++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999988888888888888888888888888888888888887 888888888888888888887776 8888888887
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 336 (1031)
+++.+|..|.++++|++|+|++|++++.+|. +..+++|++|+|++|++++.+| .+
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p------------------------~~ 263 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLP------------------------QG 263 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCC------------------------GG
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCC------------------------hH
Confidence 7777777777777777777777777755554 5556666666666666655444 44
Q ss_pred ccccccCceEEcccCCCcCccCCccCcccccceEEccccc
Q 043316 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNH 376 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 376 (1031)
++.+++|++|+|++|++++.+|.. +.+++|+.|++++|+
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 555555555555555555555543 555555555555555
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=337.75 Aligned_cols=331 Identities=22% Similarity=0.238 Sum_probs=207.4
Q ss_pred CCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEE
Q 043316 292 LSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLE 371 (1031)
Q Consensus 292 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 371 (1031)
+++++.|++++|.++...+..+.++++|++|++++|.+++..+..|+.+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46667777777776633333345555555555555555554444555555555555555555555555555555555555
Q ss_pred ccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccC
Q 043316 372 LCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451 (1031)
Q Consensus 372 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 451 (1031)
+++|+++...+..|.++++|++|++++|++.+..+..|..+++|++|++++|++.++.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---------------------- 181 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---------------------- 181 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC----------------------
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc----------------------
Confidence 5555555433334455555555555555555555555555555555555555554432
Q ss_pred cccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccc
Q 043316 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS 531 (1031)
Q Consensus 452 ~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 531 (1031)
+..++.|+.+++++|.+.+ +....+|++|++++|++... |.. ..++|+.|++++|++++. ..+..
T Consensus 182 -----~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 182 -----LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp -----GGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGG
T ss_pred -----cccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcC
Confidence 2333444444444444432 22335677788888877643 322 246788888888888753 46777
Q ss_pred cCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhh
Q 043316 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELN 611 (1031)
Q Consensus 532 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 611 (1031)
+++|++|+|++|++++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 8888888888888887777888888888888888888864 4556677888888888888887 5676777888888888
Q ss_pred cCCCccCCCCccccccCCcceEEecccccccCCCCCC--CCcccccccCCCCccC
Q 043316 612 LSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS--TAFKDGLMEGNKGLCG 664 (1031)
Q Consensus 612 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~~~~~~~n~~~c~ 664 (1031)
|++|+|+... +..+++|+.|++++|++++..... ..+....+.+++..|.
T Consensus 325 L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 325 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCC
T ss_pred CCCCccceeC---chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceec
Confidence 8888887763 566788888999999888632211 1123334455555565
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=326.38 Aligned_cols=307 Identities=25% Similarity=0.352 Sum_probs=183.4
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+..+++|++|++++|.+. .+|. +..+++|++|++++|++++ +|. +.++++|++|++++|.+++ +| .++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 345677777777777776 3443 7777777777777777773 343 7777777777777777763 43 467777777
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|.++ .+|. +.++++|++|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|+.|++++|.
T Consensus 114 ~L~l~~n~i~-~~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNIS-DISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCC-CCGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCccc-Cchh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 7777777776 3444 6677777777777775543333 36666677777777776663322 5666666666666666
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 336 (1031)
+++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|++++..+
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-------------------------- 238 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-------------------------- 238 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--------------------------
T ss_pred cccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--------------------------
Confidence 665432 5566666666666666654333 5566666666666666553222
Q ss_pred ccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccc
Q 043316 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 416 (1031)
+..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|++|++++|++.+..+..|..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 44445555555555555432 2344555555555555555433 2355555555555555555555555555555666
Q ss_pred ceeccccccccccccccCCCCCCCeecccccccc
Q 043316 417 RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY 450 (1031)
Q Consensus 417 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 450 (1031)
+|++++|++++..+ +..+++|+.|++++|.++
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 66666665555544 555666666666666654
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=324.48 Aligned_cols=307 Identities=28% Similarity=0.432 Sum_probs=225.0
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCccccccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~ 200 (1031)
+..+++|++|++++|.++ .+| .+..+++|++|++++|+++ .+|. ++.+++|++|+|++|.++ .+| .+.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCccc-Cch-HHcCCCcCC
Confidence 456777888888887776 444 3777777777777777776 3444 677777777777777776 343 466777777
Q ss_pred EEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccc
Q 043316 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280 (1031)
Q Consensus 201 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 280 (1031)
+|++++|.+++ +|. +..+++|++|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|+
T Consensus 114 ~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 77777777663 333 6666666666666665443333 35666666666666666654332 5555555555555555
Q ss_pred ccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCc
Q 043316 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360 (1031)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 360 (1031)
+.+..+ +..+++|+.| ++++|.+.+..+ ++.+++|++|++++|++++..+
T Consensus 189 l~~~~~--~~~l~~L~~L------------------------~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYF------------------------TAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp CCCCGG--GGGCTTCCEE------------------------ECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred cccccc--ccCCCcccee------------------------ecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--
Confidence 543221 4444445554 455555544333 7788999999999999987655
Q ss_pred cCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCC
Q 043316 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440 (1031)
Q Consensus 361 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 440 (1031)
+..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|++|++++|.+.+..+..+..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 89999999999999999864 5789999999999999999986 4689999999999999999999999999999999
Q ss_pred eeccccccccCcccccccCCCccccccCcccccC
Q 043316 441 FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIY 474 (1031)
Q Consensus 441 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~ 474 (1031)
.|++++|++++..+ +..+++|++|++++|.|+
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999998876 888999999999999885
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-35 Score=353.22 Aligned_cols=332 Identities=22% Similarity=0.240 Sum_probs=218.0
Q ss_pred CCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEE
Q 043316 292 LSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLE 371 (1031)
Q Consensus 292 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 371 (1031)
+++++.|++++|.++...+..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45667777777776644444445555666666666666655555566666666666666666555555555666666666
Q ss_pred ccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccC
Q 043316 372 LCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451 (1031)
Q Consensus 372 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 451 (1031)
|++|.+++..+..|+++++|++|++++|.+.+..|..|.++++|++|++++|.+.++. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 6666665444444555555666666555555555555555555555555555554443 2233445555555544432
Q ss_pred cccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccc
Q 043316 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS 531 (1031)
Q Consensus 452 ~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 531 (1031)
+....+|+.|++++|.+....+. + .++|+.|+|++|.+++ +..+..
T Consensus 207 -----------------------------l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 207 -----------------------------LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp -----------------------------EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGG
T ss_pred -----------------------------ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--Chhhcc
Confidence 23345677888888877643322 2 2578888888888875 366778
Q ss_pred cCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhh
Q 043316 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELN 611 (1031)
Q Consensus 532 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 611 (1031)
+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 8888888888888887778888888888888888888875 4666677888888888888887 6777788888888888
Q ss_pred cCCCccCCCCccccccCCcceEEecccccccCCCCCC--CCcccccccCCCCccCC
Q 043316 612 LSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS--TAFKDGLMEGNKGLCGN 665 (1031)
Q Consensus 612 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~~~~~~~n~~~c~~ 665 (1031)
|++|+|++.. +..+++|+.|++++|+|+|..+.. ..+....+.++...|+.
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 8888888763 556788999999999988743211 12334456677777775
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-35 Score=317.92 Aligned_cols=231 Identities=13% Similarity=0.095 Sum_probs=181.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .+++.||||++...... +....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVL-PDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccccc-CHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 5699999999999999999965 45899999999765422 223467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++.. ....++.+++.|++.||+|||++ ||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999999643 34567889999999999999999 99999999999999999999998543
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
|++ .++.++||||+||++|||+||+.||........... .. ..............
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-~~----~~~~~~~~~~~~~~ 229 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-AE----RDTAGQPIEPADID 229 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-CC----BCTTSCBCCHHHHC
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-HH----HHhccCCCChhhcc
Confidence 333 368899999999999999999999875543210000 00 00000000000000
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......+.+++.+||+.||++| |+.|+++.|++
T Consensus 230 ~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~ 262 (286)
T 3uqc_A 230 RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQ 262 (286)
T ss_dssp TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence 1112357889999999999999 99999999863
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=314.52 Aligned_cols=287 Identities=26% Similarity=0.304 Sum_probs=146.1
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
+++.++++++.++ .+|..+. ++|++|+|++|.+++..|..++++++|++|++++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4555555555554 4454442 355555555555554444445555555555555555554444445555555555555
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC--C
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF--G 259 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~ 259 (1031)
+|.++ .+|..+. ++|++|++++|++ ++..+..+.++++|+.|++++|.++ +
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i------------------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 163 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRI------------------------RKVPKGVFSGLRNMNCIEMGGNPLENSG 163 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCC------------------------CCCCSGGGSSCSSCCEEECCSCCCBGGG
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCcc------------------------CccCHhHhCCCccCCEEECCCCccccCC
Confidence 55444 4444333 4444444444444 4333333444444444444444443 2
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccc
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 339 (1031)
..|..+..+ +|++|++++|++++ +|..+. ++|++|++++|++++..+..+.++++|+.|++++|++++..|..++.
T Consensus 164 ~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 239 (332)
T 2ft3_A 164 FEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSF 239 (332)
T ss_dssp SCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGG
T ss_pred CCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhC
Confidence 344445554 55555555555553 343332 45556666666665555555555566666666666666555555666
Q ss_pred cccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCC------CCCceEeccCcccC--CcCchhccC
Q 043316 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL------TKLVLVNMCENHLF--GLIPKSFRN 411 (1031)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~l~~N~l~--~~~~~~~~~ 411 (1031)
+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|... .+|+.|++++|.+. ...|..|..
T Consensus 240 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 318 (332)
T 2ft3_A 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318 (332)
T ss_dssp CTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccc
Confidence 666666666666665 445556666666666666666665555444432 33444455554443 334444444
Q ss_pred Cccccceecccc
Q 043316 412 LTSLERLRFNQN 423 (1031)
Q Consensus 412 l~~L~~L~L~~N 423 (1031)
+++|+.+++++|
T Consensus 319 l~~L~~l~l~~n 330 (332)
T 2ft3_A 319 VTDRLAIQFGNY 330 (332)
T ss_dssp BCCSTTEEC---
T ss_pred cchhhhhhcccc
Confidence 444444444433
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=316.10 Aligned_cols=287 Identities=24% Similarity=0.276 Sum_probs=221.6
Q ss_pred cceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccccccccccccc
Q 043316 150 CLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLS 229 (1031)
Q Consensus 150 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 229 (1031)
+|+.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|++++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4556666666655 5666553 567777788777776666778888888888888888887777888888888888888
Q ss_pred ccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc--ccCCcccccCCCCCeeeeccCccCC
Q 043316 230 QNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF--GSIPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 230 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
+|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|+++ +..|..|..+ +|+.|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 88888 6676665 78999999999999887778999999999999999996 4677788888 99999999999985
Q ss_pred CCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccC
Q 043316 308 SIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGN 387 (1031)
Q Consensus 308 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 387 (1031)
+|..+. ++|++|++++|.+++..|..+..+++|++|+|++|++++..+..+..+++|++|++++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 565554 68888888888888877788888888888888888888887778888888888888888887 66777888
Q ss_pred CCCCceEeccCcccCCcCchhccCC------ccccceeccccccc--cccccccCCCCCCCeeccccc
Q 043316 388 LTKLVLVNMCENHLFGLIPKSFRNL------TSLERLRFNQNNLF--GKVYEAFGDHPNLTFLDLSQN 447 (1031)
Q Consensus 388 l~~L~~L~l~~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N 447 (1031)
+++|++|++++|++++..+..|... .+|+.|++++|.+. ++.+.+|..+++|+.+++++|
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 8888888888888888777776653 44666666666654 455555666666666666554
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=350.53 Aligned_cols=236 Identities=23% Similarity=0.312 Sum_probs=190.4
Q ss_pred hccCccceeecCCCccEEEEEeC--CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe---
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH--- 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~--- 833 (1031)
++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 67999999999999999999764 68999999986532 22346678999999999999999999999987655
Q ss_pred --eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 834 --SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 834 --~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
.|+||||+++++|.+++.. .+++.+++.++.||+.||+|||++ ||+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 6999999999999988754 488999999999999999999999 99999999999999875 899999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
++..... ....||+.|+|||++.++ ++.++|||||||++|+|++|..||...... ..+
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------------~~~ 285 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD-----------------GLP 285 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS-----------------SCC
T ss_pred chhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc-----------------ccc
Confidence 9876533 445789999999998765 489999999999999999998886532110 111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHHh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPT-MKKVCNLL 1029 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~L 1029 (1031)
. ..........+.+++.+||+.||++||+ ++++.+.+
T Consensus 286 ~-~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 286 E-DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQL 323 (681)
T ss_dssp T-TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred c-cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence 1 1112223346889999999999999995 55555544
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=324.06 Aligned_cols=246 Identities=14% Similarity=0.122 Sum_probs=186.7
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcCC---------CCceeee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEIR---------HRNIIKF 824 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~---------h~niv~l 824 (1031)
.++|++.+.||+|+||+||+|+. +++.||||++...... ......+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999987 7899999999765321 12234577889999888885 6666655
Q ss_pred eee-----------------Eec-------------CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHH
Q 043316 825 HGF-----------------CSN-------------AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874 (1031)
Q Consensus 825 ~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 874 (1031)
.++ +.+ .+..|+||||+++|++.+.+.. ..+++.++..++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 554 333 6889999999999977666643 347899999999999999
Q ss_pred HHHhh-hCCCCCeeeCCCCCCCeeeCCCC--------------------ceEEeccccccccCCCCCCceeeccccCccc
Q 043316 875 LSYLH-HDCLPPIVHGDISSKNVLLDSEH--------------------EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933 (1031)
Q Consensus 875 L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~a 933 (1031)
|+||| ++ +|+||||||+||+++.++ .+||+|||+|+.... ....||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-----~~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-----GIVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----TEEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----CcEEEeecccC
Confidence 99999 88 999999999999999887 899999999997643 24579999999
Q ss_pred cccccccCCCccccchhhhHH-HHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhc
Q 043316 934 PEIAHMMRATEKYDVHSFGVL-ALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCL 1012 (1031)
Q Consensus 934 PE~~~~~~~~~~sDvwslG~i-l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 1012 (1031)
||++.+.. +.++||||+|++ .+++++|..||..... ............................++.+++.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW----LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH----HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh----hhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHh
Confidence 99998765 899999998777 7788889999632110 01111122211112222222333445567899999999
Q ss_pred cCCCCCCCCHHHHH
Q 043316 1013 VESPEARPTMKKVC 1026 (1031)
Q Consensus 1013 ~~dP~~Rps~~evl 1026 (1031)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999988
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=311.68 Aligned_cols=200 Identities=24% Similarity=0.296 Sum_probs=115.5
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+.+++|+|++|++++..+..++++++|++|+|++|++++..|..++++++|++|++++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 46677777777777555556777777777777777777666666777777777777777666 5565554 56666666
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc--ccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG--SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
++|.+++..|..++++++|++|++++|.++. ..+..++++++|++|++++|+++ .+|..+. ++|++|++++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCC
Confidence 6666665445556666666666666666542 44455555555555555555555 3443332 44555555555555
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
+..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 444444555555555555555544444444444444444444444444
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=312.30 Aligned_cols=229 Identities=22% Similarity=0.283 Sum_probs=177.3
Q ss_pred hccCcc-ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHH-hcCCCCceeeeeeeEec----C
Q 043316 759 DDFGEK-YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL-TEIRHRNIIKFHGFCSN----A 831 (1031)
Q Consensus 759 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l-~~l~h~niv~l~~~~~~----~ 831 (1031)
++|.+. +.||+|+||.||+|.. .+++.||||++... ..+.+|+.++ +..+||||+++++++.. .
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 567776 7899999999999955 57999999998542 3456788887 56689999999999876 6
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCceEEec
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHEAHVSD 908 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~D 908 (1031)
...++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 78899999999999999998653 24588999999999999999999999 9999999999999998 78899999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc-C
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL-D 987 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-~ 987 (1031)
||++.... +..++.++||||+||++|||++|+.||......... ....... .
T Consensus 164 fg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----~~~~~~~~~ 216 (299)
T 3m2w_A 164 FGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----PGMKTRIRM 216 (299)
T ss_dssp CTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------CCSCCSSCT
T ss_pred cccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----HHHHHHHhh
Confidence 99987542 134678999999999999999999998644321100 0000000 0
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
................+.+++.+||+.||.+|||+.|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1111111111122346888999999999999999999986
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-33 Score=310.89 Aligned_cols=291 Identities=20% Similarity=0.242 Sum_probs=161.8
Q ss_pred CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
.+|++++++++.++ .+|..+. ++|++|++++|++++..+..|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 36777888877776 5665553 46677777777776544446666666677777666666555666666666666666
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccccc
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
++|+++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|.++. .+.
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~ 162 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS----------------------SGI 162 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG----------------------GGB
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc----------------------cCc
Confidence 666665 4554433 455556665555554444445555555555555555532 113
Q ss_pred CCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcc
Q 043316 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364 (1031)
Q Consensus 285 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 364 (1031)
.+..|.++++|++|++++|+++. +|..+. ++|++|++++|++++..|..++.+++|++|+|++|.+++..+..+..+
T Consensus 163 ~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 163 ENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp CTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred ChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 33344444444444444444442 333222 445555555555555445555555666666666666655555555556
Q ss_pred cccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCC------ccccceecccccccc--ccccccCCC
Q 043316 365 KSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNL------TSLERLRFNQNNLFG--KVYEAFGDH 436 (1031)
Q Consensus 365 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~~--~~~~~~~~l 436 (1031)
++|++|++++|+++ .+|..+..+++|++|++++|+++++.+..|... ..|+.|++++|.+.. +.+..|..+
T Consensus 240 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~ 318 (330)
T 1xku_A 240 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV 318 (330)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTC
T ss_pred CCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccc
Confidence 66666666666655 445555556666666666666655555555332 344555555554432 334455555
Q ss_pred CCCCeeccccc
Q 043316 437 PNLTFLDLSQN 447 (1031)
Q Consensus 437 ~~L~~L~Ls~N 447 (1031)
++++.++|++|
T Consensus 319 ~~l~~l~L~~N 329 (330)
T 1xku_A 319 YVRAAVQLGNY 329 (330)
T ss_dssp CCGGGEEC---
T ss_pred cceeEEEeccc
Confidence 55555555554
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=326.42 Aligned_cols=244 Identities=16% Similarity=0.117 Sum_probs=179.9
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC-Cceeee------------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKF------------ 824 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l------------ 824 (1031)
.+|...+.||+|+||.||+|. ..+|+.||||++..... ......+.+.+|+.+++.++| ++....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC-ccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 457788999999999999996 56799999999874332 222346789999999999987 321111
Q ss_pred ---------eeeEec-----CCeeEEEEEeccCCCchhhcccC----CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 043316 825 ---------HGFCSN-----AQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886 (1031)
Q Consensus 825 ---------~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 886 (1031)
+.++.. ....+++|+++ +++|.++++.. .....+++..+..++.||++||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 111111 22456777765 67999888521 1234577889999999999999999999 99
Q ss_pred eeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeeccccCccccccc----------cccCCCccccchhhhHHHH
Q 043316 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA----------HMMRATEKYDVHSFGVLAL 956 (1031)
Q Consensus 887 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwslG~il~ 956 (1031)
+||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 99999999999999999999999999875432 344567 999999998 5556888999999999999
Q ss_pred HHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 957 EVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 957 elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
||+||+.||........ . . ..+. ..... ...+.+++.+||+.||++|||+.|+++
T Consensus 309 elltg~~Pf~~~~~~~~--~---~---~~~~-~~~~~-------~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG--S---E---WIFR-SCKNI-------PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGSC--S---G---GGGS-SCCCC-------CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhhh--H---H---HHHh-hcccC-------CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999865432110 0 0 0111 11111 135788999999999999999888754
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-35 Score=347.00 Aligned_cols=359 Identities=16% Similarity=0.111 Sum_probs=180.9
Q ss_pred ccccEEEecccccccccCc-cccccccccccccccccccc----ccCccccccCcccEEEeecCcCCCCCCcccc-ccc-
Q 043316 197 SNLAYLYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQLRG----SIPFSLANLSNLGILYLYKNSLFGFIPSVIG-NLK- 269 (1031)
Q Consensus 197 ~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~- 269 (1031)
++|++|+|++|+++..... .+..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 5677888888887644333 36677778888888877764 3455666667777777777776653333222 233
Q ss_pred ---cccccccccccccc----cCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc
Q 043316 270 ---SLFELDLSENQLFG----SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342 (1031)
Q Consensus 270 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 342 (1031)
+|++|+|++|+++. .+|..+..+++|++|++++|.+++..+..+.. ......++
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~-------------------~l~~~~~~ 143 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE-------------------GLLDPQCR 143 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH-------------------HHTSTTCC
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH-------------------HHhcCCCc
Confidence 56677777776663 34556666666666666666654211111100 00111334
Q ss_pred CceEEcccCCCcCcc----CCccCcccccceEEccccccCCCcccccc-----CCCCCceEeccCcccCCc----Cchhc
Q 043316 343 LRTLYLYDNGFYGLV----PNEIGYLKSLSKLELCRNHLSGVIPHSIG-----NLTKLVLVNMCENHLFGL----IPKSF 409 (1031)
Q Consensus 343 L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~~~----~~~~~ 409 (1031)
|++|+|++|++++.. +..+..+++|++|++++|.++...+..+. ..++|++|++++|.++.. ++..+
T Consensus 144 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 223 (461)
T 1z7x_W 144 LEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIV 223 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHH
T ss_pred ceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHH
Confidence 555555555555422 33344445555555555555433332222 133555555555555442 23344
Q ss_pred cCCccccceeccccccccccc-----cccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCC
Q 043316 410 RNLTSLERLRFNQNNLFGKVY-----EAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS 484 (1031)
Q Consensus 410 ~~l~~L~~L~L~~N~l~~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l 484 (1031)
..+++|++|++++|.+..... ..+..+++|++|++++|.++..... .++..+..+
T Consensus 224 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~~l~~~ 283 (461)
T 1z7x_W 224 ASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG--------------------DLCRVLRAK 283 (461)
T ss_dssp HHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH--------------------HHHHHHHHC
T ss_pred HhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHH--------------------HHHHHHhhC
Confidence 444555555555554433221 1122344555555555444322110 012233344
Q ss_pred CCCcEEEeeCCcccCCChhhhhcc-----ccCceeecccccccCC----CcccccccCccceeecCcCcCCCCCcccccC
Q 043316 485 SKLQVLDLSSNHIVGKIPVQFEKL-----FSLNKLILNLNQLSGG----VPLEFGSLTELQYLDLSANKLSSSIPKSMGN 555 (1031)
Q Consensus 485 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 555 (1031)
++|++|+|++|.+.+..+..+... ++|+.|++++|.+++. ++..+..+++|++|+|++|++++..+..+..
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 555555555555544333333322 3555555555555533 2334444555555555555555433332221
Q ss_pred -----CCccceecccCcccCC----CCchhhccccccCceeccCcccC
Q 043316 556 -----LSKLHYLNLSNNQFNH----KIPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 556 -----l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
.++|++|+|++|++++ .+|..+..+++|++|||++|+++
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 3455555555555543 34555555555555555555554
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-36 Score=350.98 Aligned_cols=351 Identities=17% Similarity=0.112 Sum_probs=206.5
Q ss_pred CcccEEecCCCcCcCCCccc-cccCCcCcEeeCCCCcccC----CCCccccccccceEEEeeccccCCCCCcccc-Ccc-
Q 043316 101 PHLMYLNLSCNVLYGNIPPQ-ISNLSKLRALDLGNNQLSG----VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIG-KLS- 173 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~-~~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~- 173 (1031)
++|++|||++|+++...... +..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45666677666665433222 5566677777777776653 2455566666677777777666543333332 233
Q ss_pred ---cCceeeccCcccCC----CCCCcccccccccEEEecccccccccCccccc-----ccccccccccccccccc----c
Q 043316 174 ---LINVLTLCHNNFSG----RIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGN-----LNSLSILDLSQNQLRGS----I 237 (1031)
Q Consensus 174 ---~L~~L~L~~n~l~~----~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~ 237 (1031)
+|++|+|++|+++. .+|..+.++++|++|++++|.+++..+..+.. .++|++|+|++|++++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777777662 45666667777777777777765443333322 34577777777776653 3
Q ss_pred CccccccCcccEEEeecCcCCCCCCccccc-----ccccccccccccccccc----CCcccccCCCCCeeeeccCccCCC
Q 043316 238 PFSLANLSNLGILYLYKNSLFGFIPSVIGN-----LKSLFELDLSENQLFGS----IPLSFSNLSSLTLMSLFNNSLSGS 308 (1031)
Q Consensus 238 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ 308 (1031)
+..+..+++|++|++++|.++...+..+.. .++|++|+|++|++++. ++..+..+++|++|++++|++++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 445555667777777777665443333322 44677777777776643 455566667777777777766532
Q ss_pred C-----CCCCCChhhhhhhhccccccCCC----CcccccccccCceEEcccCCCcCccCCccCc-----ccccceEEccc
Q 043316 309 I-----PPTQGNLEALSELGLYINQLDGV----IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY-----LKSLSKLELCR 374 (1031)
Q Consensus 309 ~-----p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~ 374 (1031)
. +..+..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|++|++++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 322 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCC
Confidence 1 12222355566666666665543 4555666677777777777765443333332 24677777777
Q ss_pred cccCCC----ccccccCCCCCceEeccCcccCCcCchhccC-----Cccccceecccccccc----ccccccCCCCCCCe
Q 043316 375 NHLSGV----IPHSIGNLTKLVLVNMCENHLFGLIPKSFRN-----LTSLERLRFNQNNLFG----KVYEAFGDHPNLTF 441 (1031)
Q Consensus 375 N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~ 441 (1031)
|.+++. ++..+..+++|++|++++|++.+..+..+.. .++|++|++++|.++. ..+..+..+++|++
T Consensus 323 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~ 402 (461)
T 1z7x_W 323 CSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRE 402 (461)
T ss_dssp SCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCE
T ss_pred CCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccE
Confidence 776654 3445556667777777777666554444432 4566666666666654 34445555666666
Q ss_pred eccccccccC
Q 043316 442 LDLSQNNLYG 451 (1031)
Q Consensus 442 L~Ls~N~l~~ 451 (1031)
|++++|++++
T Consensus 403 L~l~~N~i~~ 412 (461)
T 1z7x_W 403 LDLSNNCLGD 412 (461)
T ss_dssp EECCSSSCCH
T ss_pred EECCCCCCCH
Confidence 6666666654
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=306.69 Aligned_cols=228 Identities=24% Similarity=0.281 Sum_probs=217.0
Q ss_pred cCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 123 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
..+++++|+|++|+++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578999999999999 89999999999999999999999 99999999999999999999999 899999999999999
Q ss_pred EecccccccccCccccc---------ccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccc
Q 043316 203 YLNNNSLFGSIPNVMGN---------LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFE 273 (1031)
Q Consensus 203 ~l~~n~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 273 (1031)
++++|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..+.++++|++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 99999999999988765 999999999999999 899999999999999999999997 5667999999999
Q ss_pred cccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCC
Q 043316 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGF 353 (1031)
Q Consensus 274 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 353 (1031)
|+|++|++.+.+|..|+++++|++|+|++|++.+.+|..++++++|++|++++|.+.+.+|..++++++|+.+++..+.+
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred cC
Q 043316 354 YG 355 (1031)
Q Consensus 354 ~~ 355 (1031)
..
T Consensus 314 ~~ 315 (328)
T 4fcg_A 314 AQ 315 (328)
T ss_dssp CC
T ss_pred HH
Confidence 53
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=304.05 Aligned_cols=284 Identities=20% Similarity=0.186 Sum_probs=180.0
Q ss_pred CCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCC
Q 043316 61 KISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV 140 (1031)
Q Consensus 61 ~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 140 (1031)
...+|.|.|+ |+.. +++++ .+|.. + .++|++|++++|++++..+..+.++++|++|+|++|++++.
T Consensus 26 ~~~~C~~~~~-c~~~---------~~~l~-~iP~~-~--~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (353)
T 2z80_A 26 ASLSCDRNGI-CKGS---------SGSLN-SIPSG-L--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTI 91 (353)
T ss_dssp -CCEECTTSE-EECC---------STTCS-SCCTT-C--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cCCCCCCCeE-eeCC---------CCCcc-ccccc-c--cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCcc
Confidence 4567999998 7542 22332 33432 2 25788888888888865555788888888888888888876
Q ss_pred CCccccccccceEEEeeccccCCCCCc-cccCcccCceeeccCcccCCCCCC--cccccccccEEEecccc-cccccCcc
Q 043316 141 IPQEIGHLTCLRMLYFDVNHLHGSIPL-EIGKLSLINVLTLCHNNFSGRIPP--SLGNLSNLAYLYLNNNS-LFGSIPNV 216 (1031)
Q Consensus 141 ~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~ip~--~~~~l~~L~~L~l~~n~-l~~~~p~~ 216 (1031)
.|..++++++|++|++++|++++ +|. .++++++|++|+|++|.++ .+|. .++++++|++|++++|+ +++..|..
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 92 EEDSFSSLGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred CHhhcCCCCCCCEEECCCCcCCc-CCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHH
Confidence 67778888888888888888874 444 3777888888888888877 4554 67777888888887773 55444566
Q ss_pred cccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccc---cCC
Q 043316 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFS---NLS 293 (1031)
Q Consensus 217 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~ 293 (1031)
|+++++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|++|++++|++++..+..+. ..+
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~ 249 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNS 249 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCC
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccc
Confidence 77777777777777777766677777777777777777776544333344566666666666666654333222 123
Q ss_pred CCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEcc
Q 043316 294 SLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELC 373 (1031)
Q Consensus 294 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 373 (1031)
.++.++|+++.++ +|.+. .+|..++.+++|++|+|++|+++...+..|+.+++|++|+++
T Consensus 250 ~l~~l~L~~~~l~-------------------~~~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 309 (353)
T 2z80_A 250 LIKKFTFRNVKIT-------------------DESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLH 309 (353)
T ss_dssp CCCEEEEESCBCC-------------------HHHHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred hhhcccccccccc-------------------Ccchh-hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEee
Confidence 3333333333322 12222 245556666666666666666654333334566666666666
Q ss_pred ccccCCC
Q 043316 374 RNHLSGV 380 (1031)
Q Consensus 374 ~N~l~~~ 380 (1031)
+|++.+.
T Consensus 310 ~N~~~~~ 316 (353)
T 2z80_A 310 TNPWDCS 316 (353)
T ss_dssp SSCBCCC
T ss_pred CCCccCc
Confidence 6665543
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-34 Score=345.12 Aligned_cols=449 Identities=15% Similarity=0.089 Sum_probs=269.4
Q ss_pred CCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcC---cCCCccccc------------cCCcCc
Q 043316 64 PCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVL---YGNIPPQIS------------NLSKLR 128 (1031)
Q Consensus 64 ~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~---~~~~p~~~~------------~l~~L~ 128 (1031)
|++|.++.+.. .+... +.+ .+ +..++..+..+++|++|+|+++.. .|.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~-~~~l~--~~~-~~-~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET-REHVT--MAL-CY-TATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH-CCEEE--ESC-GG-GSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc-ccEEE--Eee-cc-ccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 44899996533 22222 221 11 223344467788999999987642 245555444 788899
Q ss_pred EeeCCCCcccCCCCcccccc--ccceEEEeeccc-cCC-CCCccccCcccCceeeccCcccCCC----CCCccccccccc
Q 043316 129 ALDLGNNQLSGVIPQEIGHL--TCLRMLYFDVNH-LHG-SIPLEIGKLSLINVLTLCHNNFSGR----IPPSLGNLSNLA 200 (1031)
Q Consensus 129 ~L~l~~n~l~~~~p~~~~~l--~~L~~L~l~~n~-l~~-~~p~~~~~l~~L~~L~L~~n~l~~~----ip~~~~~l~~L~ 200 (1031)
+|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999998887777777764 449999998876 221 1233344778888999998888765 444556788888
Q ss_pred EEEecccccc----cccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC---CCCCccccccccccc
Q 043316 201 YLYLNNNSLF----GSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF---GFIPSVIGNLKSLFE 273 (1031)
Q Consensus 201 ~L~l~~n~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~ 273 (1031)
+|++++|.++ +.++..+.++++|++|+|++|.+.+ +|..+.++++|+.|+++.+... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 8888888886 3455566778888888888888884 6777888888888888754332 233456677778888
Q ss_pred cccccccccccCCcccccCCCCCeeeeccCccCCCCC-CCCCChhhhhhhhccccccCCCCcccccccccCceEEccc--
Q 043316 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIP-PTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYD-- 350 (1031)
Q Consensus 274 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-- 350 (1031)
|+++++.. +.+|..+..+++|++|+|++|.+++... ..+.++++|+.|+++++...+.++..+..+++|++|++++
T Consensus 275 L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~ 353 (592)
T 3ogk_B 275 LGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGA 353 (592)
T ss_dssp EEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCC
T ss_pred cCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCc
Confidence 88877543 3566677777788888888877654322 2345666677777663322223333345566677777762
Q ss_pred ---------CCCcCccC-CccCcccccceEEccccccCCCccccccC-CCCCceEecc----CcccCCc-----Cchhcc
Q 043316 351 ---------NGFYGLVP-NEIGYLKSLSKLELCRNHLSGVIPHSIGN-LTKLVLVNMC----ENHLFGL-----IPKSFR 410 (1031)
Q Consensus 351 ---------N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~~-----~~~~~~ 410 (1031)
|.+++... .....+++|++|+++.|.+++..+..+.. +++|+.|+++ .|++++. .+..+.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~ 433 (592)
T 3ogk_B 354 DEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLI 433 (592)
T ss_dssp CSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHH
T ss_pred cccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHH
Confidence 44443211 12334566666666666666555555544 6666666664 4455543 222344
Q ss_pred CCccccceecccc--ccccccccccC-CCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCC
Q 043316 411 NLTSLERLRFNQN--NLFGKVYEAFG-DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKL 487 (1031)
Q Consensus 411 ~l~~L~~L~L~~N--~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L 487 (1031)
++++|++|++++| .++......+. .+++|+.|++++|++++. .++..+..+++|
T Consensus 434 ~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~-----------------------~~~~~~~~~~~L 490 (592)
T 3ogk_B 434 GCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE-----------------------GLMEFSRGCPNL 490 (592)
T ss_dssp HCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH-----------------------HHHHHHTCCTTC
T ss_pred hCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH-----------------------HHHHHHhcCccc
Confidence 4555555555432 23333322222 244555555555444321 112233455677
Q ss_pred cEEEeeCCcccCC-ChhhhhccccCceeecccccccCCCcccc-cccCccceeecCc
Q 043316 488 QVLDLSSNHIVGK-IPVQFEKLFSLNKLILNLNQLSGGVPLEF-GSLTELQYLDLSA 542 (1031)
Q Consensus 488 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~ 542 (1031)
++|+|++|.+++. ++..+..+++|+.|+|++|++++.....+ ..++.++...+..
T Consensus 491 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 491 QKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp CEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred CeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 7777777776543 23334556777777777777765433222 2345554444443
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=292.43 Aligned_cols=250 Identities=24% Similarity=0.294 Sum_probs=186.4
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCcc-ccccCCcCcEeeCCCCcccC--CC
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSG--VI 141 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~--~~ 141 (1031)
|.|.+|.|+..+ ++ .+|.. -.++|++|+|++|+++ .+|+ .+.++++|++|+|++|+++. .+
T Consensus 7 C~~~~l~c~~~~-l~-----------~ip~~---~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 7 CSGTEIRCNSKG-LT-----------SVPTG---IPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp EETTEEECCSSC-CS-----------SCCSC---CCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred eCCCEEEcCCCC-cc-----------cCCCC---CCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCc
Confidence 799999997532 11 22321 2367899999999988 5555 46889999999999998873 34
Q ss_pred CccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCC-CcccccccccEEEecccccccccCcccccc
Q 043316 142 PQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIP-PSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220 (1031)
Q Consensus 142 p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 220 (1031)
|..+..+++|++|++++|.++ .+|..+..+++|++|++++|.+++..+ ..+.++++|++|++++|.+++..|..++++
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 149 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC
T ss_pred ccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC
Confidence 667777888888888888887 677778888888888888888885444 578888888888888888887777778888
Q ss_pred ccccccccccccccc-ccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeee
Q 043316 221 NSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMS 299 (1031)
Q Consensus 221 ~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 299 (1031)
++|++|+|++|++++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 888888888888875 5677777888888888888888777777777777777888877777766666677777777777
Q ss_pred eccCccCCCCCCCCCCh-hhhhhhhccccccCC
Q 043316 300 LFNNSLSGSIPPTQGNL-EALSELGLYINQLDG 331 (1031)
Q Consensus 300 L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~ 331 (1031)
+++|++++..|..+..+ ++|++|++++|.+++
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 77777776666555555 255555555555544
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-31 Score=290.61 Aligned_cols=248 Identities=25% Similarity=0.275 Sum_probs=152.1
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccC--CCCCccccCcccCceeecc
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLH--GSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~--~~~p~~~~~l~~L~~L~L~ 181 (1031)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..++++++|++|+|++|+++ +.+|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35667777776 6666543 57888888888887333334677777888888777776 2235566667777777777
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccC-cccccccccccccccccccccccCccccccCcccEEEeecCcCCC-
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG- 259 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~- 259 (1031)
+|.++ .+|..+.++++|++|++++|++++..+ ..+.++++|++|++++|++++..|..+..+++|++|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 77766 566666667777777777777664333 456666666666666666666556666666666666666666654
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccc
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 339 (1031)
.+|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+ ..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------------------------~~~~~ 221 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT------------------------FPYKC 221 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS------------------------GGGTT
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh------------------------hhccC
Confidence 355556666666666666666655555555555555555555555554333 34444
Q ss_pred cccCceEEcccCCCcCccCCccCccc-ccceEEccccccCC
Q 043316 340 LSSLRTLYLYDNGFYGLVPNEIGYLK-SLSKLELCRNHLSG 379 (1031)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 379 (1031)
+++|++|+|++|.+++..|..+..++ +|++|++++|.+++
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 55555555555555555555555542 55555555555543
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-32 Score=331.59 Aligned_cols=258 Identities=15% Similarity=0.083 Sum_probs=126.6
Q ss_pred CCccccccccceEEEeecccc---CCCCCcccc------------CcccCceeeccCcccCCCCCCccccc--ccccEEE
Q 043316 141 IPQEIGHLTCLRMLYFDVNHL---HGSIPLEIG------------KLSLINVLTLCHNNFSGRIPPSLGNL--SNLAYLY 203 (1031)
Q Consensus 141 ~p~~~~~l~~L~~L~l~~n~l---~~~~p~~~~------------~l~~L~~L~L~~n~l~~~ip~~~~~l--~~L~~L~ 203 (1031)
++..+..+++|++|+|+++.. .|.+|..++ .+++|++|+|++|.+++..+..++.+ ++|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 344456677777777766432 134444333 45556666666655554444444443 3356666
Q ss_pred ecccc-ccc-ccCcccccccccccccccccccccc----cCccccccCcccEEEeecCcCCC----CCCccccccccccc
Q 043316 204 LNNNS-LFG-SIPNVMGNLNSLSILDLSQNQLRGS----IPFSLANLSNLGILYLYKNSLFG----FIPSVIGNLKSLFE 273 (1031)
Q Consensus 204 l~~n~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~ 273 (1031)
|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|+.|++++|.+++ .++..+.++++|++
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~ 224 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVS 224 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCE
T ss_pred CcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcE
Confidence 55554 110 1222223455555555555555433 22233445555555555555542 12223344455555
Q ss_pred cccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCC
Q 043316 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGF 353 (1031)
Q Consensus 274 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 353 (1031)
|+|++|.+.+ +|..+.++++|+.|+++.+... ++ .+..+..+..+++|+.|+++++..
T Consensus 225 L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~--~~-------------------~~~~~~~l~~~~~L~~L~l~~~~~ 282 (592)
T 3ogk_B 225 VKVGDFEILE-LVGFFKAAANLEEFCGGSLNED--IG-------------------MPEKYMNLVFPRKLCRLGLSYMGP 282 (592)
T ss_dssp EECSSCBGGG-GHHHHHHCTTCCEEEECBCCCC--TT-------------------CTTSSSCCCCCTTCCEEEETTCCT
T ss_pred EeccCccHHH-HHHHHhhhhHHHhhcccccccc--cc-------------------hHHHHHHhhccccccccCccccch
Confidence 5555555543 3444555555555555432111 00 012234455666777777766533
Q ss_pred cCccCCccCcccccceEEccccccCCCcc-ccccCCCCCceEeccCcccCCcCchhccCCccccceecc
Q 043316 354 YGLVPNEIGYLKSLSKLELCRNHLSGVIP-HSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421 (1031)
Q Consensus 354 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~ 421 (1031)
+.+|..+..+++|++|++++|.+++... ..+..+++|++|+++++-.....+..+..+++|++|+++
T Consensus 283 -~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 283 -NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp -TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred -hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 3455566666777777777776544322 234556666666666222112222223444555555555
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-31 Score=297.77 Aligned_cols=249 Identities=22% Similarity=0.238 Sum_probs=148.8
Q ss_pred cCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcc-cCCCCcccc-------ccccceEEEeeccccCCCCCccc
Q 043316 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQL-SGVIPQEIG-------HLTCLRMLYFDVNHLHGSIPLEI 169 (1031)
Q Consensus 98 ~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l-~~~~p~~~~-------~l~~L~~L~l~~n~l~~~~p~~~ 169 (1031)
+..++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3455667777777777 667666554 77777777777 345666555 56777777777777776677665
Q ss_pred --cCcccCceeeccCcccCCCCCCccccc-----ccccEEEecccccccccCcccccccccccccccccccccc--cCcc
Q 043316 170 --GKLSLINVLTLCHNNFSGRIPPSLGNL-----SNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS--IPFS 240 (1031)
Q Consensus 170 --~~l~~L~~L~L~~n~l~~~ip~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~ 240 (1031)
+.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. +|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 6677777777777777654 6666666 6677777777766655556666666666666666666543 2223
Q ss_pred c--cccCcccEEEeecCcCCCC---CCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCC
Q 043316 241 L--ANLSNLGILYLYKNSLFGF---IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN 315 (1031)
Q Consensus 241 l--~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 315 (1031)
+ ..+++|++|+|++|++++. ....+.++++|++|+|++|++++..|. ..+..
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-----------------------~~~~~ 251 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA-----------------------PSCDW 251 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC-----------------------SCCCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch-----------------------hhhhh
Confidence 3 5556666666666655521 112223445555555555555544331 23333
Q ss_pred hhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCC
Q 043316 316 LEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSG 379 (1031)
Q Consensus 316 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 379 (1031)
+++|++|++++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|++|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 444444455555544 3444444 5666666666666655 44 6666666677777666654
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-31 Score=293.42 Aligned_cols=254 Identities=22% Similarity=0.201 Sum_probs=174.5
Q ss_pred ccccCCcCcEeeCCCCcccCCCCccccccccceEEEeecccc-CCCCCcccc-------CcccCceeeccCcccCCCCCC
Q 043316 120 QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL-HGSIPLEIG-------KLSLINVLTLCHNNFSGRIPP 191 (1031)
Q Consensus 120 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l-~~~~p~~~~-------~l~~L~~L~L~~n~l~~~ip~ 191 (1031)
.++..++|++|++++|.+ .+|..+... |++|+|++|++ .+.+|..++ ++++|++|+|++|++++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 356777888888988888 778777655 88888888888 456776665 677777777777777777777
Q ss_pred cc--cccccccEEEecccccccccCcccccc-----cccccccccccccccccCccccccCcccEEEeecCcCCCC--CC
Q 043316 192 SL--GNLSNLAYLYLNNNSLFGSIPNVMGNL-----NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF--IP 262 (1031)
Q Consensus 192 ~~--~~l~~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~p 262 (1031)
.+ +++++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..++++++|++|+|++|++.+. .|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 65 7777777777777777755 6666665 5566666666666554445555555555555555555433 12
Q ss_pred ccc--cccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCc-ccccc
Q 043316 263 SVI--GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIP-PSIGN 339 (1031)
Q Consensus 263 ~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~ 339 (1031)
..+ .++++|++|+|++|++++. + +.....+.++++|++|++++|++++.+| ..+..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~-~--------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETP-S--------------------GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCH-H--------------------HHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred HHHHhccCCCCCEEECCCCcCcch-H--------------------HHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 222 4444555555555544411 0 0001122334555666666666666654 45677
Q ss_pred cccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCc
Q 043316 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL 404 (1031)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 404 (1031)
+++|++|+|++|+++ .+|..+. ++|++|++++|++++. |. +..+++|++|++++|++++.
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 899999999999998 5677766 8999999999999977 65 99999999999999999763
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-30 Score=290.49 Aligned_cols=283 Identities=20% Similarity=0.149 Sum_probs=167.9
Q ss_pred ccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccc
Q 043316 147 HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSIL 226 (1031)
Q Consensus 147 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 226 (1031)
.++.....++++|.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|++++|++++..|..|+++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 3444455677777776 6666554 367777777777775444467777777777777777766556667777777777
Q ss_pred cccccccccccCccccccCcccEEEeecCcCCCCCC-ccccccccccccccccc-cccccCCcccccCCCCCeeeeccCc
Q 043316 227 DLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP-SVIGNLKSLFELDLSEN-QLFGSIPLSFSNLSSLTLMSLFNNS 304 (1031)
Q Consensus 227 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~ 304 (1031)
+|++|++++..+..++++++|++|+|++|++++..+ ..+.++++|++|++++| .+.+..|..|.++++|++|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 777777764333346666777777777776665433 35666666666666666 3554445566666666666666666
Q ss_pred cCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCcccc
Q 043316 305 LSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS 384 (1031)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 384 (1031)
+++..|..+.++++|++|++++|++....+..+..+++|++|++++|++++..+..+..
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------- 244 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST--------------------- 244 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-------------------------
T ss_pred cCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc---------------------
Confidence 66555555655556666666655554322222334555555555555555443332211
Q ss_pred ccCCCCCceEeccCcccCC----cCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcc
Q 043316 385 IGNLTKLVLVNMCENHLFG----LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEI 453 (1031)
Q Consensus 385 ~~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 453 (1031)
......++.++++++.+.+ .+|..+..+++|++|++++|+++.++...|..+++|++|+|++|++.+..
T Consensus 245 ~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 245 GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp --CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 1123344444444444443 23455666666666666666666666666667777777777777766543
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-30 Score=307.92 Aligned_cols=299 Identities=28% Similarity=0.336 Sum_probs=185.5
Q ss_pred CccCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCc
Q 043316 47 SLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSK 126 (1031)
Q Consensus 47 ~~~~sw~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~ 126 (1031)
...++|. .+.+||.|+|..|..... ..+....++.|++++|.++ .+|..+. ++
T Consensus 10 ~~w~~W~------~~~~~~~~~~r~~~~~~~------------------~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~ 62 (622)
T 3g06_A 10 AVWSAWR------RAAPAEESRGRAAVVQKM------------------RACLNNGNAVLNVGESGLT-TLPDCLP--AH 62 (622)
T ss_dssp CHHHHHH------HTCCGGGHHHHHHHHHHH------------------HHHHHHCCCEEECCSSCCS-CCCSCCC--TT
T ss_pred HHHHHHH------hcCCcchhccccccCccc------------------ccccCCCCcEEEecCCCcC-ccChhhC--CC
Confidence 4566786 456889998865421100 0011123566666666666 5666554 56
Q ss_pred CcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecc
Q 043316 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNN 206 (1031)
Q Consensus 127 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~ 206 (1031)
|++|+|++|+++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|++|.++ .+|. .+++|++|++++
T Consensus 63 L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~ 130 (622)
T 3g06_A 63 ITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFG 130 (622)
T ss_dssp CSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCS
T ss_pred CcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCC
Confidence 777777777666 4554 4566677777777666 4555 5566677777777766 3554 456677777777
Q ss_pred cccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCC
Q 043316 207 NSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIP 286 (1031)
Q Consensus 207 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 286 (1031)
|+++ .+|.. +++|++|+|++|++++ +|. .+++|+.|++++|.+++ +| ..+++|+.|+|++|++++ +|
T Consensus 131 N~l~-~lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~ 197 (622)
T 3g06_A 131 NQLT-SLPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LP 197 (622)
T ss_dssp SCCS-CCCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CC
T ss_pred CCCC-cCCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CC
Confidence 7766 35543 3667777777777663 443 23566777777777765 33 345667777777777763 44
Q ss_pred cccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccc
Q 043316 287 LSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS 366 (1031)
Q Consensus 287 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 366 (1031)
.. +++|+.|++++|.++ .+|.. +++|+.|++++|++++ +| ..+++|++|+|++|+++.. |. .+++
T Consensus 198 ~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~l-p~---~~~~ 262 (622)
T 3g06_A 198 TL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSL-PM---LPSG 262 (622)
T ss_dssp CC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CC---CCTT
T ss_pred Cc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcC-Cc---cccc
Confidence 32 356777777777776 34432 3556666667676664 34 3446777777777777643 43 4567
Q ss_pred cceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCc
Q 043316 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLT 413 (1031)
Q Consensus 367 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 413 (1031)
|+.|+|++|+|+ .+|..+.++++|+.|++++|.+.+..|..|..++
T Consensus 263 L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 263 LLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 777777777776 5566677777777777777777766666555443
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=290.60 Aligned_cols=247 Identities=26% Similarity=0.254 Sum_probs=151.9
Q ss_pred ccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
...++.+++.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 455666666665 5665543 5677777777777766666677777777777777777655556666777777777777
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccC-ccccccCcccEEEeecCcCCCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP-FSLANLSNLGILYLYKNSLFGFI 261 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~ 261 (1031)
|++++..+..|+++++|++|+|++|++++..+..|.++++|++|+|++|...+.+| ..+.++++|+.|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 77664444556667777777777777664444566666666666666633222333 3456666666666666666543
Q ss_pred CccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccc
Q 043316 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLS 341 (1031)
Q Consensus 262 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 341 (1031)
| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++ ..|..|..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------------~~~~~~~~l~ 266 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL------------------------IERNAFDGLA 266 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE------------------------ECTTTTTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce------------------------ECHHHhcCCC
Confidence 2 35555566666666666655555555555555555555555554 4444555556
Q ss_pred cCceEEcccCCCcCccCCccCcccccceEEccccccC
Q 043316 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378 (1031)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 378 (1031)
+|++|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 267 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 267 SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 6666666666666555555666666666666666654
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=275.60 Aligned_cols=208 Identities=22% Similarity=0.212 Sum_probs=148.2
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccc-cCCCCCccccCcccCcee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNH-LHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L 178 (1031)
.++|++|++++|.+++..|..++.+++|++|+|++|.+++..|..++++++|++|++++|. +++..|..++.+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4577788888888776555667777788888888777776667777777777777777776 554446677777777777
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
+|++|.+++..|..+.++++|++|++++|++++..+..|+++++|++|+|++|++++..+..+..+++|+.|+|++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 77777777666677777777777777777777555556777777777777777777544455677777777777777777
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCC
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
+..|..|.++++|++|++++|++++..+..+..+++|+.|++++|.+..
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 6666677777777777777777765555556667777777777776653
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=273.83 Aligned_cols=254 Identities=23% Similarity=0.264 Sum_probs=149.3
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1031)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..|..++++++|++|++++|.+++..|..++.+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56777777776 566544 457788888888877655566777777777777777777655666777777777777777
Q ss_pred c-cCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCC
Q 043316 184 N-FSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP 262 (1031)
Q Consensus 184 ~-l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 262 (1031)
. ++...|..+.++++|++|++++|++++..|..|+++++|++|+|++|++++..+..++.+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 554446666666777777777766665555666666666666666666664444445555556666665555555444
Q ss_pred ccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc
Q 043316 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342 (1031)
Q Consensus 263 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 342 (1031)
..|.++++|++|+|++|++++..|..|.++++|+.|++++|+++ +..+..+..+++
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------------~~~~~~~~~l~~ 226 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS------------------------ALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS------------------------CCCHHHHTTCTT
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCC------------------------cCCHHHcccCcc
Confidence 44555555555555555555444444555555555554444444 333344555556
Q ss_pred CceEEcccCCCcCccCCccCcccccceEEccccccCCCccccc
Q 043316 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI 385 (1031)
Q Consensus 343 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 385 (1031)
|++|++++|.+....+.. .....++.+..+.+.+....|..+
T Consensus 227 L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp CCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGG
T ss_pred cCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHh
Confidence 666666666554332211 111223344444555544444443
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-28 Score=283.68 Aligned_cols=226 Identities=27% Similarity=0.268 Sum_probs=130.8
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
+|++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 44555555555554445555555555555555555554445555555555555555555554444445556666666666
Q ss_pred cCcCCCCCCccccccccccccccccc-cccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSEN-QLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 332 (1031)
+|++++..+..|.++++|++|+|++| .+....+..|.++++|++|+|++|++++ +| .+..+++|++|+|++|++++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCccc
Confidence 66665555555666666666666663 3332223356667777777777776663 22 344555555555555555555
Q ss_pred CcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCccc
Q 043316 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL 401 (1031)
Q Consensus 333 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 401 (1031)
.|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++|.+
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 566666666666666666666666666666666666666666666655555555555555555555554
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-28 Score=281.79 Aligned_cols=225 Identities=26% Similarity=0.273 Sum_probs=103.3
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
+++.|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 44444444444444444445555555555555555544444445555555555555555553333345555555555555
Q ss_pred cCcCCCCCCcccccccccccccccccc-ccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQ-LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 332 (1031)
+|++++..+..|.++++|++|+|++|+ +....+..|.++++|++|+|++|+++ .+| .+..+++|++|+|++|++++.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCcc
Confidence 555554444455555555555555532 22222234555555555555555555 222 233333333333333333333
Q ss_pred CcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcc
Q 043316 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400 (1031)
Q Consensus 333 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 400 (1031)
.|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np 290 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNP 290 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSC
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCC
Confidence 33444444444444444444444444444444444444444444443333333344444444444433
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-28 Score=282.05 Aligned_cols=227 Identities=26% Similarity=0.231 Sum_probs=103.7
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|++++..+..+.++++|++|+|++|++++..|..|.++++|++|+|++|+++
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~------------------ 125 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT------------------ 125 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCS------------------
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCC------------------
Confidence 44555555555555444455555555555555555555444444555555555555555444
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccC-ccccccCcccEEEeecCcCCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP-FSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
+..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+..+.++ ..|.++++|++|+|++|+++.
T Consensus 126 ------~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 126 ------TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp ------SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred ------eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 2222334444444444444444443333344444444444444422211222 234444444444444444442
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccc
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 339 (1031)
. | .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++. .+..|.+
T Consensus 200 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------------------------~~~~~~~ 253 (440)
T 3zyj_A 200 I-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI------------------------ERNAFDN 253 (440)
T ss_dssp C-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE------------------------CTTSSTT
T ss_pred c-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEE------------------------ChhhhcC
Confidence 2 2 234444444444444444444444444444444444444444332 3333344
Q ss_pred cccCceEEcccCCCcCccCCccCcccccceEEcccccc
Q 043316 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL 377 (1031)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 377 (1031)
+++|++|+|++|++++..+..|..+++|+.|+|++|.+
T Consensus 254 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 254 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred CCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 44444444444444444444444445555555555544
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-29 Score=299.21 Aligned_cols=188 Identities=19% Similarity=0.141 Sum_probs=134.9
Q ss_pred eecCCCccEEEE-EeCCCcEEEEEEccchhhh------hhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEE
Q 043316 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF------DEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 767 lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~------~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.+.|+.|.+..+ +...|+.||||++.+.... ......++|.+|+++++++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 556777777666 4446899999999664321 1233456799999999999 6999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||++|++|.++++... +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|++||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999998754 34443 5899999999999999 9999999999999999999999999999987655
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCC
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P 964 (1031)
.......+||+.|||||++.+ .+..++|+||+|++.+++.++..|
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 555667889999999999876 567789999999999888766443
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-29 Score=276.20 Aligned_cols=268 Identities=21% Similarity=0.232 Sum_probs=196.5
Q ss_pred cCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecc
Q 043316 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421 (1031)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~ 421 (1031)
+++.++++.+.+...++..+..+++|++|++++|++++..|..|..+++|++|++++|++++..+ |..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45556666776665555555666777777777777777666777777777777777777766544 6666677777777
Q ss_pred ccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCC
Q 043316 422 QNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501 (1031)
Q Consensus 422 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 501 (1031)
+|++.++.. .++|+.|++++|+++++ .+. .+++|++|++++|++++..
T Consensus 89 ~n~l~~l~~-----~~~L~~L~l~~n~l~~~------------------------~~~---~~~~L~~L~l~~N~l~~~~ 136 (317)
T 3o53_A 89 NNYVQELLV-----GPSIETLHAANNNISRV------------------------SCS---RGQGKKNIYLANNKITMLR 136 (317)
T ss_dssp SSEEEEEEE-----CTTCCEEECCSSCCSEE------------------------EEC---CCSSCEEEECCSSCCCSGG
T ss_pred CCccccccC-----CCCcCEEECCCCccCCc------------------------Ccc---ccCCCCEEECCCCCCCCcc
Confidence 666655442 25666666666655533 222 2466888888888888777
Q ss_pred hhhhhccccCceeecccccccCCCcccc-cccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccc
Q 043316 502 PVQFEKLFSLNKLILNLNQLSGGVPLEF-GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580 (1031)
Q Consensus 502 p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 580 (1031)
+..+..+++|+.|++++|++++..+..+ ..+++|++|+|++|++++. + ....+++|++|+|++|+|++..+ .|..+
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l 213 (317)
T 3o53_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSA 213 (317)
T ss_dssp GBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGG
T ss_pred chhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchh-hhccc
Confidence 7788888888888888888887666666 4678888888888888754 3 23347889999999999886544 48888
Q ss_pred cccCceeccCcccCCcCCccccCcccchhhhcCCCccC-CCCccccccCCcceEEeccc-ccccCCCCC
Q 043316 581 IHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLF-DLIPGCFEEMRSLSRIDIAY-NELQGPIPN 647 (1031)
Q Consensus 581 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~ 647 (1031)
++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +..|..+..+++|+.+++++ +.++|..|.
T Consensus 214 ~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 214 AGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred CcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 89999999999988 57778888889999999999998 66678888888999999884 456665553
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=277.54 Aligned_cols=263 Identities=25% Similarity=0.332 Sum_probs=181.6
Q ss_pred CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
.++++|++++|.++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 46899999999998 8888776 79999999999998 6777 5788999999999988 6777 6789999999
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccccc
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
++|++++ +|. .+++|++|++++|+++ .+|.. +++|++|+|++|++++. |. .+++|+.|++++|++++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-
Confidence 9999884 555 5678888999999888 46654 37888888888888763 43 24678888888888874
Q ss_pred CCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcc
Q 043316 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364 (1031)
Q Consensus 285 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 364 (1031)
+| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++. +|.. +++|++|+|++|++++. | ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~l-p---~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSL-P---VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-C---CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCcC-C---CCC
Confidence 55 456778888888888874 4432 3556666666666663 3432 35666666666666552 3 334
Q ss_pred cccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecccccccccccc
Q 043316 365 KSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE 431 (1031)
Q Consensus 365 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 431 (1031)
++|+.|++++|+|+. +|. .+++|+.|++++|+|+. +|..|.++++|+.|+|++|.+.+..+.
T Consensus 241 ~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~~-lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 241 SELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCCS-CCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCCc-CCHHHhhccccCEEEecCCCCCCcCHH
Confidence 566666666666653 333 44555555555555553 244455555555555555544444433
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-28 Score=273.00 Aligned_cols=267 Identities=19% Similarity=0.173 Sum_probs=212.8
Q ss_pred hhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccC
Q 043316 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398 (1031)
Q Consensus 319 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 398 (1031)
++..+++.+.+...++..+..+++|++|+|++|++++..|..|..+++|++|++++|++++..+ +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4456777777776666667778899999999999999888899999999999999999987655 99999999999999
Q ss_pred cccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCC
Q 043316 399 NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIP 478 (1031)
Q Consensus 399 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p 478 (1031)
|+++++. ..++|++|++++|++.++.+.. +++|+.|++++|+++++..
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~------------------------ 137 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRD------------------------ 137 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGG------------------------
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccc------------------------
Confidence 9998754 3489999999999998887654 5678899988887775443
Q ss_pred CCccCCCCCcEEEeeCCcccCCChhhhh-ccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCC
Q 043316 479 PEIGDSSKLQVLDLSSNHIVGKIPVQFE-KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLS 557 (1031)
Q Consensus 479 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 557 (1031)
..+..+++|++|+|++|++++..+..+. .+++|+.|+|++|++++. + ....+++|++|+|++|++++ +|..+..++
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~ 214 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAA 214 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGT
T ss_pred hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccC
Confidence 3445566777777777777766666553 577788888888877744 2 22347889999999999885 455588888
Q ss_pred ccceecccCcccCCCCchhhccccccCceeccCcccC-CcCCccccCcccchhhhcCCC-ccCCCCcc
Q 043316 558 KLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ-GEIPPQICNMESLEELNLSHN-NLFDLIPG 623 (1031)
Q Consensus 558 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~ 623 (1031)
+|++|+|++|+|+. +|..+..+++|+.|+|++|++. +.+|..+..+++|+.|++++| .+++..|.
T Consensus 215 ~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 215 GVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 99999999999874 5777888899999999999998 677888889999999999844 56665443
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-27 Score=252.89 Aligned_cols=218 Identities=28% Similarity=0.324 Sum_probs=142.2
Q ss_pred CCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCC
Q 043316 62 ISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVI 141 (1031)
Q Consensus 62 ~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 141 (1031)
.|+|.|.|+.|.-.+.++.++++ +++++ .+|..+. ++|++|+|++|++++..
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~-------------------------~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~ 53 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCS-------------------------SKKLT-AIPSNIP--ADTKKLDLQSNKLSSLP 53 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECT-------------------------TSCCS-SCCSCCC--TTCSEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEcc-------------------------CCCCC-ccCCCCC--CCCCEEECcCCCCCeeC
Confidence 38999999999643333344444 44444 3444332 45566666666665444
Q ss_pred CccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccccc
Q 043316 142 PQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLN 221 (1031)
Q Consensus 142 p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 221 (1031)
+..|+++++|++|+|++|++++..+..+.++++|++|+|++|.+++..+..+.++++|++|++++|++++..|..|++++
T Consensus 54 ~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 133 (270)
T 2o6q_A 54 SKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT 133 (270)
T ss_dssp TTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCc
Confidence 44566666666666666666532223345666666666666666644445566677777777777777655556667777
Q ss_pred ccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeec
Q 043316 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301 (1031)
Q Consensus 222 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 301 (1031)
+|++|+|++|++++..+..+..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEec
Confidence 77777777777775444556777777777777777777666667777777777777777776555567777888888888
Q ss_pred cCccCC
Q 043316 302 NNSLSG 307 (1031)
Q Consensus 302 ~N~l~~ 307 (1031)
+|.+..
T Consensus 214 ~N~~~c 219 (270)
T 2o6q_A 214 ENPWDC 219 (270)
T ss_dssp SSCBCC
T ss_pred CCCeeC
Confidence 887764
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.7e-28 Score=283.18 Aligned_cols=234 Identities=24% Similarity=0.191 Sum_probs=142.5
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+| ++.+++|++|+|++|.+++ +| ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC----CCCCcCEEE
Confidence 3467777777777776666677777777777777777775544 7777777777777777763 22 236677777
Q ss_pred ccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCcccc-ccCcccEEEeecCcCC
Q 043316 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLA-NLSNLGILYLYKNSLF 258 (1031)
Q Consensus 180 L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~ 258 (1031)
|++|.+++..+. .+++|++|+|++|.+++..|..++++++|++|+|++|++++..|..+. .+++|+.|+|++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 777777654443 346677777777777766666666777777777777777666666654 5666777777777666
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccC-CCCcccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD-GVIPPSI 337 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~ 337 (1031)
+..+ +..+++|++|+|++|++++. |..|..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|.++
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred cccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 5422 23466666666666666643 3336666666666666666653 4444444444444444444443 2333333
Q ss_pred cccccCceEE
Q 043316 338 GNLSSLRTLY 347 (1031)
Q Consensus 338 ~~l~~L~~L~ 347 (1031)
..++.|+.|+
T Consensus 259 ~~l~~L~~l~ 268 (487)
T 3oja_A 259 SKNQRVQTVA 268 (487)
T ss_dssp TTCHHHHHHH
T ss_pred HhCCCCcEEe
Confidence 3333333333
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-28 Score=285.95 Aligned_cols=236 Identities=18% Similarity=0.173 Sum_probs=132.1
Q ss_pred CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.+++ +| ..++|++|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~----~~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE----ECTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC----CCCCcCEEEC
Confidence 367777777777776656666666666666666666664443 5666666666666666652 22 1255555555
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccccc
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
++|.+++..+. .+++|++|+|++|++++..|..++.+++|+.|+|++|.+++.+|..+.
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~------------------ 165 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA------------------ 165 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG------------------
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh------------------
Confidence 55555543332 234455555555555544444444455555555555555444444443
Q ss_pred CCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcc
Q 043316 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364 (1031)
Q Consensus 285 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 364 (1031)
..+++|+.|+|++|.+++..+ ...+++|+.|+|++|.+++. |+.++.+++|+.|+|++|.+++ +|..+..+
T Consensus 166 -----~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 166 -----ASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp -----GGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred -----hhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 144445555555554443311 12345555555555555543 3346666667777777776664 45556666
Q ss_pred cccceEEccccccC-CCccccccCCCCCceEecc
Q 043316 365 KSLSKLELCRNHLS-GVIPHSIGNLTKLVLVNMC 397 (1031)
Q Consensus 365 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~ 397 (1031)
++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 67777777777665 4556666666666666664
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-29 Score=303.94 Aligned_cols=452 Identities=14% Similarity=0.112 Sum_probs=225.9
Q ss_pred EEecCCCcCcCCCcc-ccccCCcCcEeeCCCCcccC---CCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 105 YLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSG---VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~---~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
.+++++.. +..|. .+..+++|++|+|+++.... ..|..++.. ....++.....+++|++|+|
T Consensus 47 ~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~------------~~~~l~~l~~~~~~L~~L~L 112 (594)
T 2p1m_B 47 KVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGY------------VYPWIEAMSSSYTWLEEIRL 112 (594)
T ss_dssp EEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCB------------CHHHHHHHHHHCTTCCEEEE
T ss_pred EEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccch------------hhHHHHHHHHhCCCCCeEEe
Confidence 45555433 23343 45678889999998875321 122211100 00001111223445555555
Q ss_pred cCcccCCCCCCccc-ccccccEEEeccc-ccccc-cCcccccccccccccccccccccccCccc----cccCcccEEEee
Q 043316 181 CHNNFSGRIPPSLG-NLSNLAYLYLNNN-SLFGS-IPNVMGNLNSLSILDLSQNQLRGSIPFSL----ANLSNLGILYLY 253 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~-~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l----~~l~~L~~L~L~ 253 (1031)
++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+++|+.|+++
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~ 192 (594)
T 2p1m_B 113 KRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNIS 192 (594)
T ss_dssp ESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECT
T ss_pred eCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEec
Confidence 55555444444443 4555566666555 33321 33333455566666666665554333322 244566666666
Q ss_pred cCc--CCC-CCCccccccccccccccccc-cccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhcccccc
Q 043316 254 KNS--LFG-FIPSVIGNLKSLFELDLSEN-QLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329 (1031)
Q Consensus 254 ~N~--l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 329 (1031)
+|. ++. .++..+.++++|++|+|++| .+. .+|..+..+++|+.|+++.+.. +++.|.+
T Consensus 193 ~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~-----------------~~~~~~~ 254 (594)
T 2p1m_B 193 CLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTA-----------------EVRPDVY 254 (594)
T ss_dssp TCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCC-----------------CCCHHHH
T ss_pred ccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccC-----------------ccchhhH
Confidence 665 110 01112234567777777766 333 3566666777777777654431 1122333
Q ss_pred CCCCcccccccccCceE-EcccCCCcCccCCccCcccccceEEccccccCCCcc-ccccCCCCCceEeccCcccCCc-Cc
Q 043316 330 DGVIPPSIGNLSSLRTL-YLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIP-HSIGNLTKLVLVNMCENHLFGL-IP 406 (1031)
Q Consensus 330 ~~~~p~~~~~l~~L~~L-~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~-~~ 406 (1031)
.+ ++..+.++++|+.| .+.+... +.++..+..+++|++|++++|.+++... ..+..+++|+.|++++| +... .+
T Consensus 255 ~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~ 331 (594)
T 2p1m_B 255 SG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLE 331 (594)
T ss_dssp HH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHH
T ss_pred HH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHH
Confidence 32 23345556666665 2322221 2233333455566666666666543221 22345566666666655 2211 11
Q ss_pred hhccCCccccceeccc---------cccccccccccC-CCCCCCeeccccccccCcccccccCCCccccccCcccccCCC
Q 043316 407 KSFRNLTSLERLRFNQ---------NNLFGKVYEAFG-DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGS 476 (1031)
Q Consensus 407 ~~~~~l~~L~~L~L~~---------N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~ 476 (1031)
.....+++|++|++.+ +.++......+. .+++|+.|+++.|.++...
T Consensus 332 ~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~----------------------- 388 (594)
T 2p1m_B 332 VLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAA----------------------- 388 (594)
T ss_dssp HHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHH-----------------------
T ss_pred HHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHH-----------------------
Confidence 1122355555555522 233332222222 2455555555554444322
Q ss_pred CCCCcc-CCCCCcEEEee--C----CcccCC-----ChhhhhccccCceeecccccccCCCcccccc-cCccceeecCcC
Q 043316 477 IPPEIG-DSSKLQVLDLS--S----NHIVGK-----IPVQFEKLFSLNKLILNLNQLSGGVPLEFGS-LTELQYLDLSAN 543 (1031)
Q Consensus 477 ~p~~~~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N 543 (1031)
+..+. .+++|+.|+++ + |.+++. ++..+..+++|+.|++++ .+++..+..+.. +++|++|+|++|
T Consensus 389 -~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~ 466 (594)
T 2p1m_B 389 -LITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFA 466 (594)
T ss_dssp -HHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred -HHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCC
Confidence 12222 24556666665 3 344321 112245566777777765 555444444444 677888888888
Q ss_pred cCCCCCcccc-cCCCccceecccCcccCCCCch-hhccccccCceeccCcccCCcCCccc-cCcccchhhhcCCCc
Q 043316 544 KLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPT-EFEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNN 616 (1031)
Q Consensus 544 ~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~ 616 (1031)
.+++..+..+ ..+++|++|+|++|.+++.... ....+++|+.|++++|+++......+ ..+++|+...+..+.
T Consensus 467 ~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 467 GDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp CSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 7765444444 5577888888888887544333 34557788888888888754333333 345666655555554
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-29 Score=306.00 Aligned_cols=439 Identities=12% Similarity=0.080 Sum_probs=243.9
Q ss_pred ceeeccCcccCCCCCCcccccccccEEEeccccccc---ccCcc------------cccccccccccccccccccccCcc
Q 043316 176 NVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG---SIPNV------------MGNLNSLSILDLSQNQLRGSIPFS 240 (1031)
Q Consensus 176 ~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~---~~p~~------------~~~l~~L~~L~L~~N~l~~~~p~~ 240 (1031)
+.++++.+... ..+..+.++++|++|++++|.... ..|.. ...+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 35566554322 222345678899999999876322 12221 234566777777777766655555
Q ss_pred cc-ccCcccEEEeecC-cCCCC-CCccccccccccccccccccccccCCcccc----cCCCCCeeeeccCccCCCCC-CC
Q 043316 241 LA-NLSNLGILYLYKN-SLFGF-IPSVIGNLKSLFELDLSENQLFGSIPLSFS----NLSSLTLMSLFNNSLSGSIP-PT 312 (1031)
Q Consensus 241 l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~~L~L~~N~l~~~~p-~~ 312 (1031)
+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+.|++++|. . .+. ..
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~-~~~~~~ 202 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-S-EVSFSA 202 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-S-CCCHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-C-cCCHHH
Confidence 54 5667777777766 33321 333344566777777777766554333332 44566666666664 1 111 11
Q ss_pred CCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEcccc-------ccCCCccccc
Q 043316 313 QGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN-------HLSGVIPHSI 385 (1031)
Q Consensus 313 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-------~l~~~~p~~~ 385 (1031)
+ +..+..+++|++|++++|...+.+|..+..+++|++|+++.+ .+.+ ++..+
T Consensus 203 l--------------------~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l 261 (594)
T 2p1m_B 203 L--------------------ERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVAL 261 (594)
T ss_dssp H--------------------HHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHH
T ss_pred H--------------------HHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHH
Confidence 1 111223455555555555211123444445555555553322 2222 22345
Q ss_pred cCCCCCceE-eccCcccCCcCchhccCCccccceecccccccccccc-ccCCCCCCCeeccccccccCcccc-cccCCCc
Q 043316 386 GNLTKLVLV-NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE-AFGDHPNLTFLDLSQNNLYGEISF-NWRNFPK 462 (1031)
Q Consensus 386 ~~l~~L~~L-~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~~ 462 (1031)
.++++|+.+ .+.+... ...+..+..+++|++|++++|.+...... .+..+++|+.|++++| +...... ....+++
T Consensus 262 ~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred hcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 555555555 2222211 12233333455566666665554433222 2345556666666655 3211111 1123455
Q ss_pred cccccCc---------ccccCCCCCCCcc-CCCCCcEEEeeCCcccCCChhhhh-ccccCceeecc--c----ccccCC-
Q 043316 463 LGTFNAS---------MNNIYGSIPPEIG-DSSKLQVLDLSSNHIVGKIPVQFE-KLFSLNKLILN--L----NQLSGG- 524 (1031)
Q Consensus 463 L~~L~l~---------~N~i~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~~- 524 (1031)
|++|+++ .+.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.+++.
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 5555552 2333322222222 367889998888888766666665 57889999998 4 556522
Q ss_pred ----CcccccccCccceeecCcCcCCCCCcccccC-CCccceecccCcccCCCCchhh-ccccccCceeccCcccCCcCC
Q 043316 525 ----VPLEFGSLTELQYLDLSANKLSSSIPKSMGN-LSKLHYLNLSNNQFNHKIPTEF-EKLIHLSELDLSHNFLQGEIP 598 (1031)
Q Consensus 525 ----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p 598 (1031)
++..+..+++|++|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 122356778899999977 666555555554 7889999999998876555554 668889999999998865443
Q ss_pred c-cccCcccchhhhcCCCccCCCCcccc-ccCCcceEEecccccc
Q 043316 599 P-QICNMESLEELNLSHNNLFDLIPGCF-EEMRSLSRIDIAYNEL 641 (1031)
Q Consensus 599 ~-~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~l~~N~l 641 (1031)
. .+..+++|+.|++++|+++......+ ..++.|+...+..+.-
T Consensus 499 ~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 499 LANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 3 34457888899999988854333334 4567777766665543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-26 Score=248.04 Aligned_cols=231 Identities=26% Similarity=0.308 Sum_probs=186.8
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
+..+..+++..+.+...+ .+..+++|++|++++|.++ .++ .++.+++|++|++++|.+++ + ..++.+++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCccccccc--ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEE
Confidence 445666777777766443 3667888888888888887 333 57888888888888888875 3 4788888889999
Q ss_pred ccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCC
Q 043316 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 180 L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
|++|.+++..|..++++++|++|++++|++++..|..|+++++|++|+|++|++++..|..++.+++|+.|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 99988887666778888899999999998887767778888889999999998887666677888899999999999888
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccc
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 339 (1031)
..+..+.++++|++|+|++|++++..|..|..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.+++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 8777788889999999999999887777788889999999999988754 456888888888888888888877
Q ss_pred cccC
Q 043316 340 LSSL 343 (1031)
Q Consensus 340 l~~L 343 (1031)
++..
T Consensus 245 ~~~~ 248 (272)
T 3rfs_A 245 VAPD 248 (272)
T ss_dssp BCGG
T ss_pred cCCC
Confidence 6543
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=243.75 Aligned_cols=206 Identities=24% Similarity=0.228 Sum_probs=166.6
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
++|++|++++|++++..+..++++++|++|+|++|++++..+..++++++|++|++++|++++..|..++++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46889999999998766668888999999999999988666678888899999999999888777778888889999999
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCccc----EEEeecC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG----ILYLYKN 255 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~N 255 (1031)
++|.+++..+..++++++|++|++++|++++ .+|..|+++++|++|+|++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 9988886666678888888888888888875 3688888888888888888888876667777777776 7888888
Q ss_pred cCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCC
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
.+++..+..+.. .+|++|+|++|++++..+..|.++++|+.|++++|.+++
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 887665555444 478888888888886655667778888888888888774
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=244.88 Aligned_cols=212 Identities=23% Similarity=0.214 Sum_probs=151.6
Q ss_pred CCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccc
Q 043316 116 NIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGN 195 (1031)
Q Consensus 116 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~ 195 (1031)
.+|..+. ++|++|+|++|++++..+..++++++|++|++++|++++..|..++++++|++|+|++|.+++..|..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4565543 57899999999998766668889999999999999888666667888888888888888888777778888
Q ss_pred cccccEEEecccccccccCcccccccccccccccccccccc-cCccccccCcccEEEeecCcCCCCCCcccccccccc--
Q 043316 196 LSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS-IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLF-- 272 (1031)
Q Consensus 196 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-- 272 (1031)
+++|++|++++|++++..+..++++++|++|+|++|++++. +|..++++++|++|+|++|++++..+..+..+++|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 88888888888888866666788888888888888888753 577788888888888888888777667777776666
Q ss_pred --ccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccC
Q 043316 273 --ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD 330 (1031)
Q Consensus 273 --~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 330 (1031)
+|++++|++++..+..+. ..+|+.|++++|++++..+..+.++++|+.|++++|++.
T Consensus 179 ~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp CEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred ceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 566666666644333332 235666666655555433333344444444444444443
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.6e-25 Score=239.09 Aligned_cols=204 Identities=25% Similarity=0.299 Sum_probs=169.0
Q ss_pred cccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccC
Q 043316 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLI 175 (1031)
Q Consensus 96 ~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 175 (1031)
.++++++++++++++|+++ .+|..+. +++++|+|++|.+++..|..+.++++|++|+|++|++++ +|.. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcC
Confidence 4677888999999999988 6777664 688999999999987778889999999999999999884 4443 788889
Q ss_pred ceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecC
Q 043316 176 NVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN 255 (1031)
Q Consensus 176 ~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 255 (1031)
++|+|++|+++ .+|..+.++++|++|++++|++++..|..|+++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999888 78888888889999999999888666677888888888888888888666667788888888888888
Q ss_pred cCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
++++..+..|.++++|++|+|++|+++ .+|..+..+.+|+.|+|++|.+.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 888777777788888888888888887 67777777778888888888775
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-25 Score=239.39 Aligned_cols=211 Identities=27% Similarity=0.302 Sum_probs=177.2
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+..+++|+.|++++|.++ .++ .++.+++|++|+|++|.+++ + +.++++++|++|++++|.+++..|..++++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 456788889999998887 343 58888999999999998885 3 4788889999999999999866666788899999
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|++++..|..++++++|++|++++|++++..|..|+++++|++|+|++|++++..+..++.+++|++|+|++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 99999999987777778889999999999999987667778889999999999999987777778889999999999999
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhh
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA 318 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 318 (1031)
+++..|..+.++++|++|+|++|.+.+. +++|+.|+++.|+++|.+|..++.+..
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 9988888888899999999999988754 457888899999999999988887654
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-24 Score=232.30 Aligned_cols=183 Identities=27% Similarity=0.261 Sum_probs=122.1
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|++++..+..++++++|++|+|++|+++...+..+.++++|++|++++|++++..+..+..+++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 45677777777776555556677777777777777776443444566777777777777776444445666777777777
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 260 (1031)
++|.+++..|..|+++++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 77777755556667777777777777777654445566777777777777777755555566677777777777777766
Q ss_pred CCccccccccccccccccccccc
Q 043316 261 IPSVIGNLKSLFELDLSENQLFG 283 (1031)
Q Consensus 261 ~p~~~~~l~~L~~L~Ls~N~l~~ 283 (1031)
.+..|..+++|+.|+|++|.+..
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCC
T ss_pred CHHHhccccCCCEEEecCCCeeC
Confidence 66666667777777777776653
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-25 Score=244.30 Aligned_cols=202 Identities=20% Similarity=0.168 Sum_probs=111.5
Q ss_pred ccceEEEeeccccCCCCCccc--cCcccCceeeccCcccCCCCC----CcccccccccEEEecccccccccCcccccccc
Q 043316 149 TCLRMLYFDVNHLHGSIPLEI--GKLSLINVLTLCHNNFSGRIP----PSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNS 222 (1031)
Q Consensus 149 ~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~ip----~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 222 (1031)
++|++|++++|.+++.+|..+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 345555555555555555554 555555555555555554433 22334555555555555555444455555555
Q ss_pred cccccccccccccc--c--CccccccCcccEEEeecCcCCCCCC--c-cccccccccccccccccccccCCcccccC---
Q 043316 223 LSILDLSQNQLRGS--I--PFSLANLSNLGILYLYKNSLFGFIP--S-VIGNLKSLFELDLSENQLFGSIPLSFSNL--- 292 (1031)
Q Consensus 223 L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~L~~N~l~~~~p--~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--- 292 (1031)
|++|+|++|++.+. + +..++.+++|++|+|++|+++...+ . .+.++++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 55555555554431 1 1122455555555555555542211 1 23455666666666666665555555554
Q ss_pred CCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcC
Q 043316 293 SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYG 355 (1031)
Q Consensus 293 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 355 (1031)
++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|+|++|.++.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 46666666666666 4555543 5667777777777653 32 5667788888888887753
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.5e-27 Score=261.43 Aligned_cols=266 Identities=18% Similarity=0.186 Sum_probs=196.4
Q ss_pred CCCccceeEeCCCCCEEEEEecCCccccccCCccccCC--CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCC
Q 043316 63 SPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSF--PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV 140 (1031)
Q Consensus 63 ~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l--~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 140 (1031)
-|.+|.++.|+. ..+..++++++.+.+ ..+..+ ++++.|++++|.+.+..|. +..+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~-~~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASDE-SLWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTCS-TTSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcCc-hhheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 345899998863 456778888876652 335566 7889999999988876554 67788999999999888765
Q ss_pred -CCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc-ccCCC-CCCcccccccccEEEeccc-ccccc-cCc
Q 043316 141 -IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN-NFSGR-IPPSLGNLSNLAYLYLNNN-SLFGS-IPN 215 (1031)
Q Consensus 141 -~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-ip~~~~~l~~L~~L~l~~n-~l~~~-~p~ 215 (1031)
+|..+..+++|++|+|++|.+++.+|..++.+++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 7888888889999999888888778888888888888888888 67652 6777888888888888888 88754 577
Q ss_pred cccccc-cccccccccc--ccc-cccCccccccCcccEEEeecCc-CCCCCCcccccccccccccccccc-ccccCCccc
Q 043316 216 VMGNLN-SLSILDLSQN--QLR-GSIPFSLANLSNLGILYLYKNS-LFGFIPSVIGNLKSLFELDLSENQ-LFGSIPLSF 289 (1031)
Q Consensus 216 ~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~ 289 (1031)
.+..++ +|++|+|++| .++ +.+|..+..+++|+.|++++|. +++..+..+.++++|++|++++|. +.......+
T Consensus 189 ~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l 268 (336)
T 2ast_B 189 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 268 (336)
T ss_dssp HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGG
T ss_pred HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHH
Confidence 778888 8888888888 444 4567777788888888888888 666667778888888888888885 222222257
Q ss_pred ccCCCCCeeeeccCccCCCCCCCCCCh-hhhhhhhccccccCCCCccccc
Q 043316 290 SNLSSLTLMSLFNNSLSGSIPPTQGNL-EALSELGLYINQLDGVIPPSIG 338 (1031)
Q Consensus 290 ~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~ 338 (1031)
.++++|+.|++++| ++ ...+..+ .+|+.|++++|++++..|..++
T Consensus 269 ~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 269 GEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred hcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 77888888888877 32 1233333 2355555666666665555544
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=230.45 Aligned_cols=189 Identities=26% Similarity=0.280 Sum_probs=91.7
Q ss_pred CCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCC
Q 043316 63 SPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIP 142 (1031)
Q Consensus 63 ~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p 142 (1031)
+||.|.|.+|....+ .++++ ++.++ .+|..+. +.|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~~~~--~l~~~-------------------------~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~ 52 (251)
T 3m19_A 3 TCETVTGCTCNEGKK--EVDCQ-------------------------GKSLD-SVPSGIP--ADTEKLDLQSTGLATLSD 52 (251)
T ss_dssp -CHHHHSSEEEGGGT--EEECT-------------------------TCCCS-SCCSCCC--TTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCCCe--EEecC-------------------------CCCcc-ccCCCCC--CCCCEEEccCCCcCccCH
Confidence 688999999953222 23444 44444 3444333 355555555555555444
Q ss_pred ccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccc
Q 043316 143 QEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNS 222 (1031)
Q Consensus 143 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 222 (1031)
..++++++|++|+|++|++++..|..+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++
T Consensus 53 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 132 (251)
T 3m19_A 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTK 132 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCc
Confidence 45555555555555555555444444455555555555555555433444455555555555555554333333444444
Q ss_pred cccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccc
Q 043316 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281 (1031)
Q Consensus 223 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 281 (1031)
|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+
T Consensus 133 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 133 LKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred ccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCce
Confidence 44444444444433333344444444444444444443333344444444444444443
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-24 Score=235.05 Aligned_cols=176 Identities=29% Similarity=0.252 Sum_probs=73.4
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
.+++|+|++|.+++..|..|.++++|++|+|++|.+++. |.. +.+++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 334444444444433333444444444444444444321 111 34444444444444444 344444444444444444
Q ss_pred cCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 333 (1031)
+|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+.++++|+.|+|++|+++ .+
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~i 187 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI 187 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-cc
Confidence 44444444444444444444444444444333334444444444444444444322223333333333333333333 23
Q ss_pred cccccccccCceEEcccCCC
Q 043316 334 PPSIGNLSSLRTLYLYDNGF 353 (1031)
Q Consensus 334 p~~~~~l~~L~~L~L~~N~l 353 (1031)
|..+..+++|+.|+|++|.+
T Consensus 188 p~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 188 PKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CTTTTTTCCCSEEECCSCCB
T ss_pred ChhhcccccCCeEEeCCCCc
Confidence 33333333444444444433
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.6e-25 Score=259.67 Aligned_cols=187 Identities=17% Similarity=0.206 Sum_probs=147.8
Q ss_pred CccceeecCCCccEEEEEeCCCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 762 GEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
...+.||+|+||.||+|.. .++.+++|+....... .+....+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999954 6788999986443221 1222356789999999999999999777777677788999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999975 457999999999999999 9999999999999998 999999999998754
Q ss_pred CCCC-------ceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCC
Q 043316 918 HSSN-------WTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPR 965 (1031)
Q Consensus 918 ~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~ 965 (1031)
.... .....||+.|||||++.+ ..|+..+|+|+..+-..+.+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3211 135679999999999987 56788899999999888888777664
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-26 Score=257.57 Aligned_cols=254 Identities=19% Similarity=0.140 Sum_probs=155.8
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCC----ccccccc-cceEEEeeccccCCCCCccccCc-----cc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIP----QEIGHLT-CLRMLYFDVNHLHGSIPLEIGKL-----SL 174 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p----~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l-----~~ 174 (1031)
++++++|+++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|++++..+..++.+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35666777776666666666667777777777765544 5556666 67777777777766656666654 67
Q ss_pred CceeeccCcccCCCCCCccccc-----ccccEEEecccccccccCccccc-----ccccccccccccccccc----cCcc
Q 043316 175 INVLTLCHNNFSGRIPPSLGNL-----SNLAYLYLNNNSLFGSIPNVMGN-----LNSLSILDLSQNQLRGS----IPFS 240 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~p~~ 240 (1031)
|++|+|++|.+++..+..++.. ++|++|+|++|++++..+..++. .++|++|+|++|++++. ++..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 7777777777766555544433 67777777777776554444332 24677777777777643 2333
Q ss_pred ccccC-cccEEEeecCcCCCCCCcccccc-----cccccccccccccccc----CCccccc-CCCCCeeeeccCccCCCC
Q 043316 241 LANLS-NLGILYLYKNSLFGFIPSVIGNL-----KSLFELDLSENQLFGS----IPLSFSN-LSSLTLMSLFNNSLSGSI 309 (1031)
Q Consensus 241 l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~ 309 (1031)
+..++ +|++|+|++|++++..+..+... ++|++|+|++|++++. ++..+.. .++|++|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34444 77777777777766555444433 4777777777777642 3444544 347777777777776543
Q ss_pred C----CCCCChhhhhhhhccccccCCCC-------cccccccccCceEEcccCCCcCccC
Q 043316 310 P----PTQGNLEALSELGLYINQLDGVI-------PPSIGNLSSLRTLYLYDNGFYGLVP 358 (1031)
Q Consensus 310 p----~~~~~l~~L~~L~L~~N~l~~~~-------p~~~~~l~~L~~L~L~~N~l~~~~p 358 (1031)
+ ..+..+++|+.|++++|.+.+.. +..+..+++|+.|++++|.+....+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3 23455566666666666644322 2345566667777777777655433
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-26 Score=266.10 Aligned_cols=246 Identities=20% Similarity=0.215 Sum_probs=162.4
Q ss_pred CCccccccCCcCcEeeCCCCcccCCC----CccccccccceEEEeecc---ccCCCCCccc-------cCcccCceeecc
Q 043316 116 NIPPQISNLSKLRALDLGNNQLSGVI----PQEIGHLTCLRMLYFDVN---HLHGSIPLEI-------GKLSLINVLTLC 181 (1031)
Q Consensus 116 ~~p~~~~~l~~L~~L~l~~n~l~~~~----p~~~~~l~~L~~L~l~~n---~l~~~~p~~~-------~~l~~L~~L~L~ 181 (1031)
.++..+..+++|++|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 56667777777888888887777553 334667777788877774 4555666555 677888888888
Q ss_pred CcccCC----CCCCcccccccccEEEecccccccccCcccc----cc---------cccccccccccccc-cccC---cc
Q 043316 182 HNNFSG----RIPPSLGNLSNLAYLYLNNNSLFGSIPNVMG----NL---------NSLSILDLSQNQLR-GSIP---FS 240 (1031)
Q Consensus 182 ~n~l~~----~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~ 240 (1031)
+|.+++ .+|..+.++++|++|+|++|.+++..+..++ .+ ++|++|+|++|+++ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888876 4677778888888888888887644333333 33 67777777777776 3444 35
Q ss_pred ccccCcccEEEeecCcCC--C---CCCcccccccccccccccccccc----ccCCcccccCCCCCeeeeccCccCCCCCC
Q 043316 241 LANLSNLGILYLYKNSLF--G---FIPSVIGNLKSLFELDLSENQLF----GSIPLSFSNLSSLTLMSLFNNSLSGSIPP 311 (1031)
Q Consensus 241 l~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 311 (1031)
+..+++|++|+|++|+++ | ..|..+.++++|++|+|++|+++ +.+|..+..+++|+.|+|++|.+++....
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 666777777777777776 2 33446667777777777777775 45666667777777777777766532000
Q ss_pred CCCChhhhhhhhccccccCCCCcccc--cccccCceEEcccCCCcC----ccCCcc-CcccccceEEccccccCCCc
Q 043316 312 TQGNLEALSELGLYINQLDGVIPPSI--GNLSSLRTLYLYDNGFYG----LVPNEI-GYLKSLSKLELCRNHLSGVI 381 (1031)
Q Consensus 312 ~~~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~~ 381 (1031)
.+|..+ +.+++|++|+|++|.+++ .+|..+ .++++|++|++++|++++..
T Consensus 263 --------------------~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 263 --------------------AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp --------------------HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred --------------------HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 123344 236667777777777765 355555 45677777777777776555
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-24 Score=235.97 Aligned_cols=226 Identities=18% Similarity=0.156 Sum_probs=190.5
Q ss_pred CCcccEEecCCCcCcCC-Ccc--ccccCCcCcEeeCCCCcccCCCCccc--cccccceEEEeeccccCCCCC----cccc
Q 043316 100 FPHLMYLNLSCNVLYGN-IPP--QISNLSKLRALDLGNNQLSGVIPQEI--GHLTCLRMLYFDVNHLHGSIP----LEIG 170 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~-~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~l~~n~l~~~~p----~~~~ 170 (1031)
...++.|.++++.++.. +.. ....+++|++|+|++|.+++.+|..+ +.+++|++|+|++|.+++..| ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 34578888888877532 111 13345779999999999999999998 999999999999999998766 4567
Q ss_pred CcccCceeeccCcccCCCCCCcccccccccEEEecccccccc--c--CcccccccccccccccccccccccCc----ccc
Q 043316 171 KLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGS--I--PNVMGNLNSLSILDLSQNQLRGSIPF----SLA 242 (1031)
Q Consensus 171 ~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~ 242 (1031)
.+++|++|+|++|.+++..|..++++++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .+|. .++
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 899999999999999988889999999999999999998753 3 233578999999999999997 3443 257
Q ss_pred ccCcccEEEeecCcCCCCCCcccccc---ccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhh
Q 043316 243 NLSNLGILYLYKNSLFGFIPSVIGNL---KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEAL 319 (1031)
Q Consensus 243 ~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 319 (1031)
.+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L 296 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEV 296 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCc
Confidence 88999999999999999888888877 69999999999999 6787775 8999999999999964 43 6788999
Q ss_pred hhhhccccccCC
Q 043316 320 SELGLYINQLDG 331 (1031)
Q Consensus 320 ~~L~L~~N~l~~ 331 (1031)
+.|++++|+++.
T Consensus 297 ~~L~L~~N~l~~ 308 (310)
T 4glp_A 297 DNLTLDGNPFLV 308 (310)
T ss_dssp SCEECSSTTTSC
T ss_pred cEEECcCCCCCC
Confidence 999999999974
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-25 Score=250.13 Aligned_cols=255 Identities=20% Similarity=0.234 Sum_probs=164.7
Q ss_pred cccEEecCCCcCcCCCccccccC--CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCC-CCccccCcccCcee
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNL--SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGS-IPLEIGKLSLINVL 178 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l--~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L 178 (1031)
.++.+++++|.+. |..+..+ +++++|++++|.+++..|. +.++++|++|++++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3677788777765 5556666 7777888887777765444 55677777777777777654 66667777777777
Q ss_pred eccCcccCCCCCCcccccccccEEEeccc-cccc-ccCccccccccccccccccc-ccccc-cCccccccC-cccEEEee
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNN-SLFG-SIPNVMGNLNSLSILDLSQN-QLRGS-IPFSLANLS-NLGILYLY 253 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n-~l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~L~ 253 (1031)
+|++|.+++.+|..++++++|++|++++| .+++ .+|..+.++++|++|+|++| ++++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 77777777666667777777777777777 5654 25555666777777777777 66643 455566666 66777766
Q ss_pred cC--cCC-CCCCcccccccccccccccccc-ccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhcccccc
Q 043316 254 KN--SLF-GFIPSVIGNLKSLFELDLSENQ-LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329 (1031)
Q Consensus 254 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 329 (1031)
+| .++ +.+|..+.++++|++|++++|. +++..+..+.++++|+.|++++|. +..+
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~------------------- 262 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIP------------------- 262 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCG-------------------
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCH-------------------
Confidence 66 333 3344555566666666666666 554555555666666666666553 1111
Q ss_pred CCCCcccccccccCceEEcccCCCcCccCCccCccc-ccceEEccccccCCCccccccC
Q 043316 330 DGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLK-SLSKLELCRNHLSGVIPHSIGN 387 (1031)
Q Consensus 330 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~ 387 (1031)
.....++++++|++|++++| ++ ...+..+. +|..|++++|++++..|..++.
T Consensus 263 --~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 263 --ETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp --GGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred --HHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 11124666788888888887 32 22344443 4777778888888887777665
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=221.80 Aligned_cols=131 Identities=20% Similarity=0.277 Sum_probs=61.0
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccc-cccccCcccccccccccccccc-cccccccCccccccCcccEEE
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNS-LFGSIPNVMGNLNSLSILDLSQ-NQLRGSIPFSLANLSNLGILY 251 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~ 251 (1031)
+|++|+|++|++++..+..|+++++|++|++++|+ +++..+..|+++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 44444455554443333344455555555555553 4433333444455555555554 444433334444445555555
Q ss_pred eecCcCCCCCCcccccccccc---ccccccc-cccccCCcccccCCCCC-eeeeccCccC
Q 043316 252 LYKNSLFGFIPSVIGNLKSLF---ELDLSEN-QLFGSIPLSFSNLSSLT-LMSLFNNSLS 306 (1031)
Q Consensus 252 L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~ 306 (1031)
+++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 55555444 232 44444444 5555555 44433333444445555 5555544444
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.3e-26 Score=259.26 Aligned_cols=256 Identities=16% Similarity=0.153 Sum_probs=152.6
Q ss_pred CcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCC----ccccCcccCceeeccCc---ccCCCCCCcc------
Q 043316 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIP----LEIGKLSLINVLTLCHN---NFSGRIPPSL------ 193 (1031)
Q Consensus 127 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~L~~n---~l~~~ip~~~------ 193 (1031)
|+...++...+. .++..+..+++|++|+|++|++++..+ ..+..+++|++|+|++| ++++.+|..+
T Consensus 11 L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~ 89 (386)
T 2ca6_A 11 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQA 89 (386)
T ss_dssp CEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHH
T ss_pred cccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHH
Confidence 333344444444 466677777788888888887775433 34567777777777774 4445555544
Q ss_pred -cccccccEEEeccccccc----ccCcccccccccccccccccccccccCcccc----cc---------CcccEEEeecC
Q 043316 194 -GNLSNLAYLYLNNNSLFG----SIPNVMGNLNSLSILDLSQNQLRGSIPFSLA----NL---------SNLGILYLYKN 255 (1031)
Q Consensus 194 -~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~L~~N 255 (1031)
.++++|++|+|++|.+++ .+|..+..+++|++|+|++|++++..+..++ .+ ++|++|+|++|
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n 169 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 169 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCC
Confidence 456666666666666665 3555666666666666666666533332222 22 44555555555
Q ss_pred cCCCCCCccccccccccccccccccccccCC---cccccCCCCCeeeeccCccCC-----CCCCCCCChhhhhhhhcccc
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFGSIP---LSFSNLSSLTLMSLFNNSLSG-----SIPPTQGNLEALSELGLYIN 327 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~L~~N 327 (1031)
+++. +.+| ..+..+++|+.|++++|+++. ..|..+..+++|+.|+|++|
T Consensus 170 ~l~~-----------------------~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n 226 (386)
T 2ca6_A 170 RLEN-----------------------GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDN 226 (386)
T ss_dssp CCTG-----------------------GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSS
T ss_pred CCCc-----------------------HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCC
Confidence 4441 2222 233444455555555554441 12223444444444444455
Q ss_pred ccC----CCCcccccccccCceEEcccCCCcCc----cCCcc--CcccccceEEccccccCC----Cccccc-cCCCCCc
Q 043316 328 QLD----GVIPPSIGNLSSLRTLYLYDNGFYGL----VPNEI--GYLKSLSKLELCRNHLSG----VIPHSI-GNLTKLV 392 (1031)
Q Consensus 328 ~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~ 392 (1031)
.++ +.+|..+..+++|++|+|++|.+++. +|..+ +.+++|++|+|++|.+++ .+|..+ .++++|+
T Consensus 227 ~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~ 306 (386)
T 2ca6_A 227 TFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 306 (386)
T ss_dssp CCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCC
T ss_pred CCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCce
Confidence 443 35566777788888888888888765 44555 337888888888888876 366666 5678888
Q ss_pred eEeccCcccCCcCc
Q 043316 393 LVNMCENHLFGLIP 406 (1031)
Q Consensus 393 ~L~l~~N~l~~~~~ 406 (1031)
+|++++|++++..+
T Consensus 307 ~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 307 FLELNGNRFSEEDD 320 (386)
T ss_dssp EEECTTSBSCTTSH
T ss_pred EEEccCCcCCcchh
Confidence 88888888877663
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.2e-24 Score=242.10 Aligned_cols=269 Identities=17% Similarity=0.175 Sum_probs=177.7
Q ss_pred hhccccccCCCCcccccccccCceEEcccCCCcCccC----CccCccc-ccceEEccccccCCCccccccCC-----CCC
Q 043316 322 LGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP----NEIGYLK-SLSKLELCRNHLSGVIPHSIGNL-----TKL 391 (1031)
Q Consensus 322 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 391 (1031)
+.+++|.+++.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4567777777777766666668888888888776655 5566666 77778888777776666666654 777
Q ss_pred ceEeccCcccCCcCchhccC----C-ccccceecccccccccccccc----CC-CCCCCeeccccccccCcccccccCCC
Q 043316 392 VLVNMCENHLFGLIPKSFRN----L-TSLERLRFNQNNLFGKVYEAF----GD-HPNLTFLDLSQNNLYGEISFNWRNFP 461 (1031)
Q Consensus 392 ~~L~l~~N~l~~~~~~~~~~----l-~~L~~L~L~~N~l~~~~~~~~----~~-l~~L~~L~Ls~N~l~~~~~~~~~~~~ 461 (1031)
++|++++|++++..+..+.. + ++|++|++++|++.......+ .. .++|++|+|++|.++......
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~----- 157 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDE----- 157 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHH-----
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHH-----
Confidence 77777777777666654433 2 666777777666665555433 22 236666666666655322211
Q ss_pred ccccccCcccccCCCCCCCccCCC-CCcEEEeeCCcccCCChhhhhcc-----ccCceeecccccccCC----Ccccccc
Q 043316 462 KLGTFNASMNNIYGSIPPEIGDSS-KLQVLDLSSNHIVGKIPVQFEKL-----FSLNKLILNLNQLSGG----VPLEFGS 531 (1031)
Q Consensus 462 ~L~~L~l~~N~i~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~~~~~~~ 531 (1031)
++..+..++ +|++|+|++|+|++..+..+... ++|+.|+|++|++++. ++..+..
T Consensus 158 ---------------l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 158 ---------------LIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp ---------------HHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred ---------------HHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 112233343 78888888888887777655543 5888888888888853 3444544
Q ss_pred -cCccceeecCcCcCCCCCc----ccccCCCccceecccCcccCCCCch-------hhccccccCceeccCcccCCcCCc
Q 043316 532 -LTELQYLDLSANKLSSSIP----KSMGNLSKLHYLNLSNNQFNHKIPT-------EFEKLIHLSELDLSHNFLQGEIPP 599 (1031)
Q Consensus 532 -l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~~~-------~~~~l~~L~~L~Ls~N~l~~~~p~ 599 (1031)
.++|++|+|++|++++..+ ..+..+++|++|+|++|++.+..+. .+..+++|+.||+++|++.+..+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 3588888888888886544 3346678888888888886655433 566777888888888888766554
Q ss_pred cccCcccchhhhc
Q 043316 600 QICNMESLEELNL 612 (1031)
Q Consensus 600 ~~~~l~~L~~L~L 612 (1031)
.+. ..++.+.+
T Consensus 303 ~~~--~~l~~~~~ 313 (362)
T 3goz_A 303 PIS--NLIRELSG 313 (362)
T ss_dssp HHH--HHHHHHHT
T ss_pred HHH--HHHHHCCC
Confidence 443 23455443
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-23 Score=220.40 Aligned_cols=188 Identities=20% Similarity=0.209 Sum_probs=124.3
Q ss_pred ccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccc-cccccCccccccCcccEEEeec-CcCCCCC
Q 043316 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQ-LRGSIPFSLANLSNLGILYLYK-NSLFGFI 261 (1031)
Q Consensus 184 ~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~ 261 (1031)
.++ .+|. +. .+|++|++++|++++..+..|+++++|++|++++|+ +++..+..|.++++|++|++++ |++++..
T Consensus 22 ~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~ 97 (239)
T 2xwt_C 22 DIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID 97 (239)
T ss_dssp SCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC
T ss_pred Ccc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC
Confidence 344 6776 44 488888898888886666678888888888888886 7755555788888888888887 8888777
Q ss_pred CccccccccccccccccccccccCCcccccCCCCC---eeeeccC-ccCCCCCCCCCChhhhh-hhhccccccCCCCccc
Q 043316 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLT---LMSLFNN-SLSGSIPPTQGNLEALS-ELGLYINQLDGVIPPS 336 (1031)
Q Consensus 262 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~ 336 (1031)
+..|.++++|++|++++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++ .+|..
T Consensus 98 ~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 98 PDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp TTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred HHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 7778888888888888888875 555 77777776 7777777 66654444555555555 5555555555 23332
Q ss_pred ccccccCceEEcccCC-CcCccCCccCcc-cccceEEccccccC
Q 043316 337 IGNLSSLRTLYLYDNG-FYGLVPNEIGYL-KSLSKLELCRNHLS 378 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~ 378 (1031)
....++|++|+|++|+ +++..+..|..+ ++|+.|++++|+++
T Consensus 175 ~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 175 AFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred hcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 2222455555555553 544444445555 55555555555554
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-23 Score=248.96 Aligned_cols=213 Identities=25% Similarity=0.354 Sum_probs=116.7
Q ss_pred cCCCCCCCCCCCCCCCC-----cccee-EeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccc
Q 043316 49 LSSWTLYPANATKISPC-----TWFGI-FCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQIS 122 (1031)
Q Consensus 49 ~~sw~~~~~~~~~~~~C-----~w~gv-~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~ 122 (1031)
+.+|. .+.++| .|.|+ +|.. ++++.|+|+++++.+ +|+. + +++|++|+|++|.|+ .+| .
T Consensus 33 l~~W~------~~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~-~ip---~ 97 (571)
T 3cvr_A 33 WDKWE------KQALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALI-SLP---E 97 (571)
T ss_dssp HHHHH------TTCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCS-CCC---C
T ss_pred HHHHh------ccCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCc-ccc---c
Confidence 56675 355778 79999 7853 466667776666665 5543 2 255666666666665 455 3
Q ss_pred cCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 123 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
.+++|++|+|++|+|++ +|. +.+ +|++|+|++|++++ +|. .+++|++|+|++|.+++ +|. .+++|++|
T Consensus 98 ~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L 165 (571)
T 3cvr_A 98 LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVL 165 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEE
T ss_pred ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEE
Confidence 45666666666666664 555 444 56666666666654 554 45555555555555553 444 34555555
Q ss_pred EecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc
Q 043316 203 YLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282 (1031)
Q Consensus 203 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 282 (1031)
+|++|++++ +|. |+ ++|++|+|++|+|+ .+|. +.. +| +...+.|+.|+|++|+|+
T Consensus 166 ~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 166 SVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRENRIT 220 (571)
T ss_dssp ECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------------------------CCEEEECCSSCCC
T ss_pred ECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----------------hcccccceEEecCCCcce
Confidence 555555553 444 43 55555555555555 3443 332 33 000011155666666555
Q ss_pred ccCCcccccCCCCCeeeeccCccCCCCCCCCC
Q 043316 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG 314 (1031)
Q Consensus 283 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 314 (1031)
.+|..+..+++|+.|+|++|.+++.+|..+.
T Consensus 221 -~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 221 -HIPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp -CCCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred -ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 4555555566666666666666555554443
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=7.7e-23 Score=225.88 Aligned_cols=193 Identities=27% Similarity=0.412 Sum_probs=108.6
Q ss_pred cCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCce
Q 043316 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINV 177 (1031)
Q Consensus 98 ~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 177 (1031)
..+++|++|++++|.++ .+| .+..+++|++|+|++|++++. |. ++++++|++|++++|++++ +| .++.+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCE
Confidence 34556666666666665 344 466666666666666666633 33 6666666666666666653 33 4566666666
Q ss_pred eeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcC
Q 043316 178 LTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 257 (1031)
|+|++|++++ +|. +.++++|++|++++|++++..+ ++.+++|++|+|++|++++ ++. +..+++|+.|++++|++
T Consensus 112 L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCcc
Confidence 6666666653 333 5666666666666666653222 5555666666666666553 222 55555666666666655
Q ss_pred CCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 258 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|+++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred CcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 54332 555555555555555555332 2455555555555555554
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-22 Score=214.70 Aligned_cols=180 Identities=25% Similarity=0.249 Sum_probs=130.3
Q ss_pred CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
...++++++++.++ .+|..+. ++|+.|+|++|++++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 34677888888887 6676665 57777888888877666667777777777777777777666666777777777777
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccccc
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
++|++++..+..|+++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 77777765566677777777777777777755555567777777777777777766666677777777777777777766
Q ss_pred CCcccccCCCCCeeeeccCccCC
Q 043316 285 IPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 285 ~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
.+..|..+++|+.|+|++|.+++
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCT
T ss_pred CHHHHhCCCCCCEEEeeCCceeC
Confidence 56566777777777777777664
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-22 Score=224.82 Aligned_cols=211 Identities=22% Similarity=0.314 Sum_probs=127.2
Q ss_pred ccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
+..+.+..+.++..++ ..++++|++|++++|.++ .+| .+..+++|++|++++|++++ +|. ++.+++|++|+|++
T Consensus 21 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSG 94 (308)
T ss_dssp HHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCS
T ss_pred HHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccC
Confidence 3344455555554332 456777777777777776 345 56777777777777777763 444 67777777777777
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP 262 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 262 (1031)
|.+++ +| .++++++|++|++++|++++ +|. ++.+++|++|+|++|++++..+ ++.+++|+.|+|++|++++..+
T Consensus 95 n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 95 NPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp CCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh
Confidence 77663 33 46667777777777777664 332 6666666666666666664322 5566666666666666655332
Q ss_pred ccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc
Q 043316 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342 (1031)
Q Consensus 263 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 342 (1031)
+.++++|++|++++|++++..+ +..+++|+.|++++|+++ +.. .+..+++
T Consensus 169 --l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~------------------------~~~--~l~~l~~ 218 (308)
T 1h6u_A 169 --LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQIS------------------------DVS--PLANTSN 218 (308)
T ss_dssp --GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCC------------------------BCG--GGTTCTT
T ss_pred --hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccC------------------------ccc--cccCCCC
Confidence 5556666666666666653322 555555555555555554 322 1555666
Q ss_pred CceEEcccCCCcC
Q 043316 343 LRTLYLYDNGFYG 355 (1031)
Q Consensus 343 L~~L~L~~N~l~~ 355 (1031)
|++|+|++|.+++
T Consensus 219 L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 219 LFIVTLTNQTITN 231 (308)
T ss_dssp CCEEEEEEEEEEC
T ss_pred CCEEEccCCeeec
Confidence 6666666666654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-22 Score=207.18 Aligned_cols=184 Identities=24% Similarity=0.249 Sum_probs=99.7
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCcc
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQE 144 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 144 (1031)
|.|.+|.|+..+- . .+|. +-.++|++|++++|++++..+..+..+++|++|+|++|++++..+..
T Consensus 7 C~~~~v~c~~~~l-----------~-~~p~---~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (208)
T 2o6s_A 7 CSGTTVECYSQGR-----------T-SVPT---GIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGV 71 (208)
T ss_dssp EETTEEECCSSCC-----------S-SCCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred ECCCEEEecCCCc-----------c-CCCC---CCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhh
Confidence 7999999975321 1 1221 12345666677666666444444566666666666666666443444
Q ss_pred ccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccc
Q 043316 145 IGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLS 224 (1031)
Q Consensus 145 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 224 (1031)
++.+++|++|++++|++++..+..++.+++|++|+|++|+++ +..+..|+++++|+
T Consensus 72 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------------~~~~~~~~~l~~L~ 127 (208)
T 2o6s_A 72 FNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ------------------------SLPDGVFDKLTQLK 127 (208)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC------------------------CCCTTTTTTCTTCC
T ss_pred cCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCc------------------------ccCHhHhccCCcCC
Confidence 555555555555555555333333445555555555555554 33333344445555
Q ss_pred cccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCC
Q 043316 225 ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSS 294 (1031)
Q Consensus 225 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 294 (1031)
+|+|++|++++..+..+..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 128 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 128 DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred EEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 55555555543333334555555555555554432 2345666666666666666666665543
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-22 Score=226.11 Aligned_cols=121 Identities=18% Similarity=0.186 Sum_probs=57.3
Q ss_pred eEEEeeccccCCCCCccccCcccCceeeccCcccCCCCC-CcccccccccEEEecccccccccCc-cccccccccc-ccc
Q 043316 152 RMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIP-PSLGNLSNLAYLYLNNNSLFGSIPN-VMGNLNSLSI-LDL 228 (1031)
Q Consensus 152 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip-~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~-L~L 228 (1031)
++++.++++++ .||..+. +++++|+|++|+++ .|| ..|++|++|++|+|++|++.+.+|. .|.++++|++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 34555566655 5555442 34555555555555 333 3455555555555555555444432 3444444432 333
Q ss_pred cccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccc
Q 043316 229 SQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276 (1031)
Q Consensus 229 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 276 (1031)
+.|+++...|..|..+++|++|++++|++++..+..+....++..|++
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhh
Confidence 444444433444444444444444444444443333333344444444
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-22 Score=223.16 Aligned_cols=204 Identities=17% Similarity=0.136 Sum_probs=120.4
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCc-cccCcccCceeeccCcccCCCCCC-ccccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPL-EIGKLSLINVLTLCHNNFSGRIPP-SLGNLSN 198 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~ip~-~~~~l~~ 198 (1031)
+..+.. ++++.++++++ .+|..+ .+++++|+|++|+++ .||. .|.++++|++|+|++|++.+.+|. .|.++++
T Consensus 6 ~C~C~~-~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 6 ICHCSN-RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp SSEEET-TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred ccEeeC-CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 444433 56677777777 667655 356777777777777 4554 567777777777777777655653 5667776
Q ss_pred ccE-EEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeec-CcCCCCCCccccccc-cccccc
Q 043316 199 LAY-LYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYK-NSLFGFIPSVIGNLK-SLFELD 275 (1031)
Q Consensus 199 L~~-L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~ 275 (1031)
|++ +.++.|++++..|..|.++++|++|++++|++++..+..+....++..|++.+ |+++...+..|..+. .++.|+
T Consensus 81 l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~ 160 (350)
T 4ay9_X 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILW 160 (350)
T ss_dssp CCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEE
T ss_pred hhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhc
Confidence 654 45556777765566777777777777777777755555566666677777754 455554455555543 456666
Q ss_pred cccccccccCCcccccCCCCCeeeecc-CccCCCCCCCCCChhhhhhhhccccccC
Q 043316 276 LSENQLFGSIPLSFSNLSSLTLMSLFN-NSLSGSIPPTQGNLEALSELGLYINQLD 330 (1031)
Q Consensus 276 Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 330 (1031)
|++|+++ .+|.......+|+.|++++ |.++...+..|.++++|++|++++|+|+
T Consensus 161 L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 161 LNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp CCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred ccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 6666665 3333333344555555543 3333222223344444444444444443
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-23 Score=253.68 Aligned_cols=242 Identities=19% Similarity=0.165 Sum_probs=111.0
Q ss_pred cCCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCC
Q 043316 22 SSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFP 101 (1031)
Q Consensus 22 ~~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~ 101 (1031)
.+....++++|+++..+.. ...+..-.+|. .+.+.++.|.|++++. .+|+.++|.++++.+. + ..
T Consensus 127 ~s~~~~~~~~l~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~-~------~~ 191 (727)
T 4b8c_D 127 KSLVDCTKQALMEMADTLT--DSKTAKKQQPT-----GDSTPSGTATNSAVST-PLTPKIELFANGKDEA-N------QA 191 (727)
T ss_dssp -----CCCHHHHHHHHHHH--HHHTTC-----------------------------------------------------
T ss_pred hhccccchhhhhhhhhhcc--cccCcccCCCc-----CCCCccccCCCceecC-CccceEEeeCCCCCcc-h------hh
Confidence 3456778999999998875 11122334553 1344567999999865 7889998887776652 1 23
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
.++.++|+.|.+.+ ++++.|.+. ..|..+..+.+|+.|+|++|.++ .+|..++++++|++|+|+
T Consensus 192 ~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls 255 (727)
T 4b8c_D 192 LLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLN 255 (727)
T ss_dssp ---------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCT
T ss_pred HhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEee
Confidence 45566666666542 344455554 45666666777777777777766 666666677777777777
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCC
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 261 (1031)
+|.++ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.++ .+|..|++|++|+.|+|++|.+++.+
T Consensus 256 ~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 332 (727)
T 4b8c_D 256 GNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQF 332 (727)
T ss_dssp TSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHH
T ss_pred CCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCC
Confidence 77777 67777777777777777777776 66777777777777777777776 66767777777777777777777777
Q ss_pred Ccccccccc-ccccccccccccccCCcccccCCCCCeeeeccC
Q 043316 262 PSVIGNLKS-LFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303 (1031)
Q Consensus 262 p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 303 (1031)
|..+..+.. +..|+|++|.+++.+|. .|+.|++++|
T Consensus 333 p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 333 LKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------
T ss_pred hHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecc
Confidence 766655432 23467778877777764 3445555555
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-22 Score=234.27 Aligned_cols=189 Identities=26% Similarity=0.344 Sum_probs=118.2
Q ss_pred cCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEec
Q 043316 126 KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN 205 (1031)
Q Consensus 126 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~ 205 (1031)
+|++|+|++|++++ +|..+. ++|++|+|++|+++ .+| +.+++|++|+|++|++++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 44444444444443 444332 44555555555544 444 234555555555555553 554 443 55555555
Q ss_pred ccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccC
Q 043316 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285 (1031)
Q Consensus 206 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 285 (1031)
+|++++ +|. .+++|++|+|++|++++ +|. .+++|+.|+|++|++++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 555554 444 45556666666666653 444 34566666666666665 444 44 66777777777776 55
Q ss_pred CcccccCCCC-------CeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc
Q 043316 286 PLSFSNLSSL-------TLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342 (1031)
Q Consensus 286 p~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 342 (1031)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..++.++.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 55 443 56 99999999999 68888888999999999999999999999887654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-21 Score=200.23 Aligned_cols=162 Identities=29% Similarity=0.331 Sum_probs=100.4
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
+|++|+|++|++++..+..++++++|++|++++|++++..+..|+++++|++|+|++|++++..+..+.++++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45555555555554333445555555555555555554434445556666666666666654444445666666666666
Q ss_pred cCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 333 (1031)
+|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 666666555556666777777777777765555556677777777777776653 3456777888888888888
Q ss_pred ccccccccc
Q 043316 334 PPSIGNLSS 342 (1031)
Q Consensus 334 p~~~~~l~~ 342 (1031)
|.+++.++.
T Consensus 182 p~~~~~l~~ 190 (208)
T 2o6s_A 182 RNSAGSVAP 190 (208)
T ss_dssp BCTTSSBCT
T ss_pred eccCccccC
Confidence 877776654
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.7e-22 Score=213.76 Aligned_cols=156 Identities=18% Similarity=0.161 Sum_probs=122.5
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhh-h-------------hcHHHHHHHHHHHhcCCC
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDE-M-------------ADQDEFLNEVLALTEIRH 818 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~-------------~~~~~~~~Ei~~l~~l~h 818 (1031)
.+......|.+.+.||+|+||.||+|...+|+.||||+++....... . .....+.+|+.++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 33444455677799999999999999777899999999865321110 0 13567899999999999
Q ss_pred CceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee
Q 043316 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL 898 (1031)
Q Consensus 819 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 898 (1031)
| +++.+++.. +..++||||+++++|.+ +.. .+...++.|++.|++|||+. ||+||||||+||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 4 666665544 56699999999999988 432 23457999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCceeeccccCccccccccc
Q 043316 899 DSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM 939 (1031)
Q Consensus 899 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 939 (1031)
+ ++.+||+|||+|+.. ..|+|||++.+
T Consensus 227 ~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~r 253 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEV-------------GEEGWREILER 253 (282)
T ss_dssp E-TTEEEECCCTTCEET-------------TSTTHHHHHHH
T ss_pred E-CCcEEEEECCCCeEC-------------CCCCHHHHHHH
Confidence 9 999999999999743 34789998754
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-22 Score=241.05 Aligned_cols=188 Identities=23% Similarity=0.248 Sum_probs=113.2
Q ss_pred cCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCc-------------ccCCCCccccccccceEEE-eeccccCC
Q 043316 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQ-------------LSGVIPQEIGHLTCLRMLY-FDVNHLHG 163 (1031)
Q Consensus 98 ~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~-------------l~~~~p~~~~~l~~L~~L~-l~~n~l~~ 163 (1031)
...++|+.|+|++|.++ .+|++|++|++|++|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56777888888888886 778888888888888887764 4556667777777777777 5555432
Q ss_pred CCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccc
Q 043316 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLAN 243 (1031)
Q Consensus 164 ~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 243 (1031)
.|+.+.+++|.++ .+|. ..|+.|+|++|++++ +|. |+++++|++|+|++|+++ .+|..+++
T Consensus 424 ----------~L~~l~l~~n~i~-~l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVL-KMEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHH-HHHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhccccc-ccCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 2233333334433 1111 135556666665553 444 555566666666666655 55555666
Q ss_pred cCcccEEEeecCcCCCCCCccccccccccccccccccccccC-CcccccCCCCCeeeeccCccCCC
Q 043316 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI-PLSFSNLSSLTLMSLFNNSLSGS 308 (1031)
Q Consensus 244 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ 308 (1031)
+++|+.|+|++|++++ +| .++++++|++|+|++|++++.. |..|+.+++|+.|+|++|++++.
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 6666666666666655 34 5555666666666666665544 55566666666666666666543
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.2e-20 Score=192.67 Aligned_cols=159 Identities=23% Similarity=0.243 Sum_probs=94.5
Q ss_pred CCCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccC
Q 043316 60 TKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSG 139 (1031)
Q Consensus 60 ~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~ 139 (1031)
.+++.|+|.+|.|+..+ + +.+|.. -.++|++|+|++|.+++..|..+..+++|++|+|++|++++
T Consensus 14 ~~~~~Cs~~~v~c~~~~-l-----------~~ip~~---~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 78 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKR-H-----------ASVPAG---IPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA 78 (229)
T ss_dssp CTTCEEETTEEECTTSC-C-----------SSCCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCEEeCCEeEccCCC-c-----------CccCCC---CCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC
Confidence 46788999999996532 1 223322 12566777777777776666666677777777777777654
Q ss_pred CCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccc
Q 043316 140 VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGN 219 (1031)
Q Consensus 140 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 219 (1031)
..+..+..+++|++|+|++|++++..|..++.+++|++|+|++|+++ .+|..+.++++|++|+|++|++++..+..|..
T Consensus 79 i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 157 (229)
T 3e6j_A 79 LPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR 157 (229)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred cChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhC
Confidence 43344566666666666666666433344555666666666666655 55555555555555555555555433344555
Q ss_pred ccccccccccccccc
Q 043316 220 LNSLSILDLSQNQLR 234 (1031)
Q Consensus 220 l~~L~~L~L~~N~l~ 234 (1031)
+++|++|+|++|.+.
T Consensus 158 l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWD 172 (229)
T ss_dssp CTTCCEEECTTSCBC
T ss_pred CCCCCEEEeeCCCcc
Confidence 555555555555544
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=226.17 Aligned_cols=200 Identities=24% Similarity=0.331 Sum_probs=140.7
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
+..+..++++.+.+...++ +..|++|+.|+|++|.++ .+| .++.+++|+.|+|++|++++..| ++.+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445566677776664433 567777888888887776 344 57777788888888887774333 77777888888
Q ss_pred ccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCC
Q 043316 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 180 L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
|++|.+++ +| .+.++++|++|+|++|++++ + +.++.+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 88887773 44 57777888888888887774 3 3477777788888888877753 567777788888888887777
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCC
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN 315 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 315 (1031)
..| +..+++|+.|+|++|++++. | .+..+++|+.|+|++|++++.....+..
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred chh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCCccccccc
Confidence 655 77777888888888877753 3 5777777777777777777544433333
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.81 E-value=9.7e-21 Score=207.08 Aligned_cols=188 Identities=24% Similarity=0.342 Sum_probs=104.2
Q ss_pred ccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
+..+++..+.+++..+ +..+++|++|++++|.++ .+| .++.+++|++|++++|++++ +|. ++++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCC
Confidence 3444455555543222 345566666666666665 233 35566666666666666653 333 56666666666666
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP 262 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 262 (1031)
|.+++ +| .++++++|++|++++|++++ + +.++.+++|++|++++|++++. ..+..+++|+.|+|++|++++..|
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 66653 33 25666666666666666653 2 3455566666666666666532 345556666666666666655433
Q ss_pred ccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 263 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
+..+++|++|+|++|++++ +| .+..+++|+.|++++|+++
T Consensus 174 --l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred --hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 5555666666666666553 23 2555555666666555554
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5e-20 Score=220.62 Aligned_cols=182 Identities=29% Similarity=0.411 Sum_probs=158.3
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+..+++|+.|++++|.+. .+| .+..+++|++|+|++|++++..| ++.+++|+.|+|++|++++ +| .++.+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 567889999999999997 455 59999999999999999996544 9999999999999999984 44 799999999
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|.+++ + +.+.+|++|+.|+|++|++++. ..++.+++|+.|+|++|++++..| +..+++|+.|+|++|.
T Consensus 113 ~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 99999999985 4 4699999999999999999864 678999999999999999997666 9999999999999999
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccC
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNL 292 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 292 (1031)
+++. ..+..+++|+.|+|++|++.+.....+..+
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSC
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcCCcccccccE
Confidence 9975 468999999999999999986433333333
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6.2e-20 Score=200.69 Aligned_cols=173 Identities=28% Similarity=0.433 Sum_probs=151.8
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+..+++|++|++++|.+.. +| .+..+++|++|+|++|++++..| ++++++|++|++++|++++ +| .++.+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 4568889999999999984 45 48999999999999999996544 9999999999999999985 44 499999999
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|++++ + +.+.++++|++|++++|++++. ..++.+++|++|+|++|++++..| +..+++|+.|+|++|.
T Consensus 116 ~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 99999999985 4 5689999999999999999854 678999999999999999996554 8999999999999999
Q ss_pred CCCCCCccccccccccccccccccccc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFG 283 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 283 (1031)
+++. | .+..+++|+.|++++|+++.
T Consensus 190 i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCC-h-hhccCCCCCEEECcCCcccC
Confidence 9875 3 48999999999999999985
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.5e-22 Score=237.03 Aligned_cols=149 Identities=23% Similarity=0.241 Sum_probs=79.6
Q ss_pred CCCCCCcccccccccEEE-ecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcc
Q 043316 186 SGRIPPSLGNLSNLAYLY-LNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSV 264 (1031)
Q Consensus 186 ~~~ip~~~~~l~~L~~L~-l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 264 (1031)
.+.+|..+++|++|+.|+ ++.|.+ .+|+.+.+++|.++. +|. ..|+.|+|++|.+++ +|.
T Consensus 398 ~~~~~~~l~~l~~L~~L~~l~~n~~-----------~~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~- 458 (567)
T 1dce_A 398 LLYEKETLQYFSTLKAVDPMRAAYL-----------DDLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH- 458 (567)
T ss_dssp GGGHHHHHHHHHHHHHHCGGGHHHH-----------HHHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-
T ss_pred ccCCHHHHHHHHhcccCcchhhccc-----------chhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-
Confidence 344555555555555555 444332 244455555555553 221 136666666666665 344
Q ss_pred ccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCC-cccccccccC
Q 043316 265 IGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI-PPSIGNLSSL 343 (1031)
Q Consensus 265 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L 343 (1031)
|+++++|+.|+|++|+++ .+|..|+++++|+.|+|++|+|++ +| .++++++|+.|+|++|++++.. |..++.+++|
T Consensus 459 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L 535 (567)
T 1dce_A 459 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL 535 (567)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCC
Confidence 666666666666666666 556666666666666666666653 33 4444444444444444444443 4444444444
Q ss_pred ceEEcccCCCcCc
Q 043316 344 RTLYLYDNGFYGL 356 (1031)
Q Consensus 344 ~~L~L~~N~l~~~ 356 (1031)
+.|+|++|.+++.
T Consensus 536 ~~L~L~~N~l~~~ 548 (567)
T 1dce_A 536 VLLNLQGNSLCQE 548 (567)
T ss_dssp CEEECTTSGGGGS
T ss_pred CEEEecCCcCCCC
Confidence 4444444444443
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-19 Score=188.11 Aligned_cols=156 Identities=22% Similarity=0.266 Sum_probs=124.5
Q ss_pred cEEEeeCCcccCCChhhhhccccCceeecccccccCCCc-ccccccCccceeecCcCcCCCCCcccccCCCccceecccC
Q 043316 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVP-LEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566 (1031)
Q Consensus 488 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 566 (1031)
+.+++++|.++. +|..+. ..++.|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 467777777763 444432 345677777777776544 4577888888888888888877777888888888888888
Q ss_pred cccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 567 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.|..|..+++|+.|++++|+|+|..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88888888888888888888888888888778888888888889999998888888888888999999999998887554
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-19 Score=188.35 Aligned_cols=153 Identities=24% Similarity=0.341 Sum_probs=113.5
Q ss_pred cEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCc
Q 043316 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNN 567 (1031)
Q Consensus 488 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 567 (1031)
+.+++++|.++ .+|..+. ++|+.|++++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666665 3344332 46677777777777666667777777777777777777666777777777777777777
Q ss_pred ccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccC
Q 043316 568 QFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 568 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
+|+...+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++.+..|..+++|++|++++|+|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 7776666667777888888888888877777778888888888888888888777778888888888888888776
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-19 Score=185.81 Aligned_cols=131 Identities=21% Similarity=0.236 Sum_probs=55.1
Q ss_pred ccEEecCCCcCcCCCcc-ccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 103 LMYLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
+++|+|++|++++..|. .+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 34455555554433232 24444444444444444443333344444444444444444443333334444444444444
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCccccccccccccccccccc
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQL 233 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 233 (1031)
+|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 4444433334444444444444444444433333333333333333333333
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-19 Score=203.26 Aligned_cols=154 Identities=27% Similarity=0.260 Sum_probs=70.7
Q ss_pred CcEeeCCCCcccCCCCcccc-ccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEec
Q 043316 127 LRALDLGNNQLSGVIPQEIG-HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN 205 (1031)
Q Consensus 127 L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~ 205 (1031)
+++|+|++|++++..+..+. ++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44555555555433333343 44444444444444443333344444555555555555543333444555555555555
Q ss_pred ccccccccCcccccccccccccccccccccccCcc-c---cccCcccEEEeecCcCCCCCCcccccccc--ccccccccc
Q 043316 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS-L---ANLSNLGILYLYKNSLFGFIPSVIGNLKS--LFELDLSEN 279 (1031)
Q Consensus 206 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-l---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N 279 (1031)
+|++++..|..|.++++|++|+|++|++++ +|.. + ..+++|+.|+|++|++++..+..+..++. |+.|+|++|
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 555554444445555555555555555542 2222 2 33445555555555554443334444443 244444444
Q ss_pred cc
Q 043316 280 QL 281 (1031)
Q Consensus 280 ~l 281 (1031)
.+
T Consensus 200 ~~ 201 (361)
T 2xot_A 200 PL 201 (361)
T ss_dssp CE
T ss_pred Cc
Confidence 43
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-19 Score=203.17 Aligned_cols=176 Identities=26% Similarity=0.293 Sum_probs=129.0
Q ss_pred cEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCcccc-CcccCceeeccCcccCCCCCCcccccccccEEEecc
Q 043316 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIG-KLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNN 206 (1031)
Q Consensus 128 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~ 206 (1031)
+.+++++|+++ .+|..+. ..++.|+|++|++++..+..+. .+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777777777 5676554 3478888888888865555666 788888888888888866667788888888888888
Q ss_pred cccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccc---cccccccccccccccccc
Q 043316 207 NSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI---GNLKSLFELDLSENQLFG 283 (1031)
Q Consensus 207 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 283 (1031)
|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 88876666677888888888888888887667778888888888888888877555555 457777777777777775
Q ss_pred cCCcccccCCC--CCeeeeccCccC
Q 043316 284 SIPLSFSNLSS--LTLMSLFNNSLS 306 (1031)
Q Consensus 284 ~~p~~~~~l~~--L~~L~L~~N~l~ 306 (1031)
..+..|..++. |+.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 44456666665 366777777665
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.78 E-value=5e-19 Score=184.87 Aligned_cols=79 Identities=19% Similarity=0.286 Sum_probs=33.6
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 184 (1031)
.+++++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4455555554 3444332 344444444444443333344444444444444444443333333333444444444333
Q ss_pred cC
Q 043316 185 FS 186 (1031)
Q Consensus 185 l~ 186 (1031)
++
T Consensus 92 l~ 93 (220)
T 2v9t_B 92 IT 93 (220)
T ss_dssp CC
T ss_pred CC
Confidence 33
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.8e-20 Score=195.84 Aligned_cols=171 Identities=21% Similarity=0.303 Sum_probs=121.5
Q ss_pred CCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 99 SFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
++.+++.+++++|.++ .++ .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++ +|. ++.+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEE
Confidence 4556777778888777 344 5777888888888888877 455 67778888888888888774 444 7778888888
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
+|++|++++ +|.... ++|++|++++|++++ +| .++++++|++|+|++|++++ +| .+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCc
Confidence 888888773 554333 777788888777774 33 47777777777777777774 33 5677777777777777777
Q ss_pred CCCCcccccccccccccccccccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
+. ..+..+++|+.|++++|.+++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 65 5567777777777777777643
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.8e-19 Score=184.32 Aligned_cols=156 Identities=28% Similarity=0.345 Sum_probs=114.4
Q ss_pred CcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccC
Q 043316 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566 (1031)
Q Consensus 487 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 566 (1031)
-+.++.+++.+. .+|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666665 3443332 5677777777777766677777777777777777777755556677777777777777
Q ss_pred cccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 567 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++.+..|..+++|+.|++++|+++|..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 7777766777777788888888888887 667777788888888888888887777777788888888888888877544
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-19 Score=222.84 Aligned_cols=164 Identities=26% Similarity=0.250 Sum_probs=59.5
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+.++.|+|++|.+.. +|. ..|+.++|+.|.+++ ++++.|.+. ..|..+..++.|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 445666666666653 222 224445555554442 233344443 34445555555555555
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 260 (1031)
++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|++|.++ .
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 555555 55555555555555555555555 45555555555555555555555 44555555555555555555544 2
Q ss_pred CCccccccccccccccccccccccCCccc
Q 043316 261 IPSVIGNLKSLFELDLSENQLFGSIPLSF 289 (1031)
Q Consensus 261 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 289 (1031)
+|..|+++++|++|+|++|.+++.+|..+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 34444444444444444444444444433
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-19 Score=194.47 Aligned_cols=171 Identities=26% Similarity=0.352 Sum_probs=132.0
Q ss_pred cCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 123 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
.+.++..+++++|.++ .++ .+..+++|++|++++|.++ .+| .++.+++|++|+|++|++++ +|+ ++++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEE
Confidence 5777888899999888 444 6788889999999999887 566 68888888888888888884 444 8888888888
Q ss_pred EecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc
Q 043316 203 YLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282 (1031)
Q Consensus 203 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 282 (1031)
+|++|++++ +|.... ++|++|+|++|++++ +| .+..+++|+.|+|++|++++. + .+..+++|++|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888874 554322 788888888888875 33 577788888888888888764 3 5777788888888888877
Q ss_pred ccCCcccccCCCCCeeeeccCccCCC
Q 043316 283 GSIPLSFSNLSSLTLMSLFNNSLSGS 308 (1031)
Q Consensus 283 ~~~p~~~~~l~~L~~L~L~~N~l~~~ 308 (1031)
+. ..+..+++|+.|++++|.+++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 55 5677777777777777777654
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.8e-19 Score=180.23 Aligned_cols=153 Identities=18% Similarity=0.232 Sum_probs=79.1
Q ss_pred cccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccccccccc
Q 043316 146 GHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSI 225 (1031)
Q Consensus 146 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 225 (1031)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+.++++|++|++++|++++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34444444444444444 344 3444555555555555332 2224555555555555555555445555555555555
Q ss_pred ccccccccccccCccccccCcccEEEeecCc-CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCc
Q 043316 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNS-LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNS 304 (1031)
Q Consensus 226 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 304 (1031)
|+|++|++++..|..++.+++|++|++++|. ++. +| .+.++++|++|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 5555555555455555555555555555555 332 33 45556666666666666553 22 45566666666666666
Q ss_pred cC
Q 043316 305 LS 306 (1031)
Q Consensus 305 l~ 306 (1031)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 54
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-18 Score=177.51 Aligned_cols=155 Identities=20% Similarity=0.235 Sum_probs=125.2
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCccccccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~ 200 (1031)
.+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..++.+++|++|++++|.+++..|..++++++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 477888888888888888 667 6888888888888888664 345788888888888888888877888888888888
Q ss_pred EEEecccccccccCcccccccccccccccccc-cccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccc
Q 043316 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQ-LRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279 (1031)
Q Consensus 201 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 279 (1031)
+|++++|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|++++|.+++. + .+..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 88888888887778888888888888888888 54 566 688888888888888888864 3 6788888888888888
Q ss_pred cccc
Q 043316 280 QLFG 283 (1031)
Q Consensus 280 ~l~~ 283 (1031)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 8763
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.1e-19 Score=195.39 Aligned_cols=218 Identities=12% Similarity=0.045 Sum_probs=142.3
Q ss_pred CccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccc----cCCCCCCCccCCCCC
Q 043316 412 LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN----IYGSIPPEIGDSSKL 487 (1031)
Q Consensus 412 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~----i~~~~p~~~~~l~~L 487 (1031)
+++|+.|+|.+ ++..+...+|..+++|+.|++++|.+..+...+|.+..++..+.+..+. ........|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 55555555555 5555555555555555555555555555555555555544444443321 122223345555666
Q ss_pred c-EEEeeCCcccCCChhhhh----ccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCcccee
Q 043316 488 Q-VLDLSSNHIVGKIPVQFE----KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYL 562 (1031)
Q Consensus 488 ~-~L~Ls~N~l~~~~p~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 562 (1031)
+ .+++.... .++..+. ...++..+.+.++-...........+++|+.|+|++|+++.+.+.+|.++++|++|
T Consensus 179 ~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l 255 (329)
T 3sb4_A 179 ETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKI 255 (329)
T ss_dssp EEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEE
T ss_pred ceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEE
Confidence 6 45554332 2222221 24556666665542221111111237889999999988887777789999999999
Q ss_pred cccCcccCCCCchhhccccccC-ceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEe
Q 043316 563 NLSNNQFNHKIPTEFEKLIHLS-ELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRID 635 (1031)
Q Consensus 563 ~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 635 (1031)
+|++| ++.+.+.+|.++.+|+ .+++.+ .++...+..|.++++|+.|++++|.++.+.+.+|..+++|+.++
T Consensus 256 ~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 256 KLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred ECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 99988 8777888899999999 999988 77766678899999999999999999999888999999998876
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-18 Score=193.81 Aligned_cols=259 Identities=14% Similarity=0.099 Sum_probs=131.9
Q ss_pred ccccccccccccccc--cccCccccccCcccEEEeecCcCCCCCCccccc--------cccccccccccccccccCCccc
Q 043316 220 LNSLSILDLSQNQLR--GSIPFSLANLSNLGILYLYKNSLFGFIPSVIGN--------LKSLFELDLSENQLFGSIPLSF 289 (1031)
Q Consensus 220 l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~ 289 (1031)
+++|++|||++|+++ ...+..+ +.+..+.+..|.+ .+..|.+ +++|+.|+|.+ .++...+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 455566666666555 1111111 2233444444422 2334555 67777777766 6664445566
Q ss_pred ccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccc----cCCCCcccccccccCc-eEEcccCCCcCccCCcc---
Q 043316 290 SNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ----LDGVIPPSIGNLSSLR-TLYLYDNGFYGLVPNEI--- 361 (1031)
Q Consensus 290 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~--- 361 (1031)
.+|++|+.|++.+|.++...+.+|.++.++..+.+..+. ....-...|.++..|+ .+.+.... .++..+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~ 197 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKA 197 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHT
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHhhc
Confidence 677777777777776665555566665555555444321 1222233455555555 34433221 111111
Q ss_pred -CcccccceEEccccccCCCccccc-cCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCC
Q 043316 362 -GYLKSLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439 (1031)
Q Consensus 362 -~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 439 (1031)
-...+++.+.+.++-.. .....+ ..+++|+.+++++|+++.+.+.+|.++.+|+++++.+| +..+...+|..+++|
T Consensus 198 ~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L 275 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRL 275 (329)
T ss_dssp TCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhc
Confidence 12334455555443211 111111 12455555555555555555555555555555555554 555555555555555
Q ss_pred C-eeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceee
Q 043316 440 T-FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI 515 (1031)
Q Consensus 440 ~-~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 515 (1031)
+ .+++.+ .++ ...+.+|.++++|+.|++++|.++.+.+.+|.++++|+.++
T Consensus 276 ~~~l~l~~-~l~------------------------~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 276 AGTLELPA-SVT------------------------AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CEEEEECT-TCC------------------------EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cEEEEEcc-cce------------------------EEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 5 555544 333 33445666666777777777777666666777777777665
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=178.81 Aligned_cols=141 Identities=17% Similarity=0.175 Sum_probs=107.5
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcE--EEEEEccchhhh-h-------------------hhhcHHHHHHHHHHHhcC
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGII--FAVKKFNSQLLF-D-------------------EMADQDEFLNEVLALTEI 816 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~-~-------------------~~~~~~~~~~Ei~~l~~l 816 (1031)
-|.+.+.||+|+||.||+|.. .+|+. ||||+++..... . .......+.+|+.++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367788999999999999976 68988 999987543211 0 001124678999999999
Q ss_pred CCCce--eeeeeeEecCCeeEEEEEeccC-C----CchhhcccCCccccCCHHHHHHHHHHHHHHHHHhh-hCCCCCeee
Q 043316 817 RHRNI--IKFHGFCSNAQHSFIVSEYLDR-G----SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH-HDCLPPIVH 888 (1031)
Q Consensus 817 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH 888 (1031)
+|+++ +..+++ +..++||||+.+ | +|.++... .++.++..++.|++.|++||| +. ||+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 88754 344432 356899999942 4 55554332 234567889999999999999 88 9999
Q ss_pred CCCCCCCeeeCCCCceEEecccccccc
Q 043316 889 GDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 889 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
|||||+||+++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999988 9999999999865
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-17 Score=168.98 Aligned_cols=110 Identities=25% Similarity=0.269 Sum_probs=56.3
Q ss_pred cccEEecCCCcCcCCCcc-ccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 102 HLMYLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
++++|++++|.+++..|. .++.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 455555555555533332 2455555555555555555444555555555555555555555444444555555555555
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG 211 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~ 211 (1031)
++|++++.+|..++.+++|++|+|++|.+++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 5555554445555555555555555555443
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.70 E-value=4e-17 Score=166.51 Aligned_cols=128 Identities=27% Similarity=0.303 Sum_probs=61.6
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCc-cccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQ-EIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
+++++++|+++ .+|..+.. +|++|+|++|++++..|. .++++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666663 55554433 555566665555533332 245555555555555555544444444444444444444
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccc
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLR 234 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 234 (1031)
|++++..|..|+++++|++|+|++|++++.+|..|+.+++|++|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 4444444444444444444444444444444444444444444444444443
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.68 E-value=6.5e-17 Score=161.25 Aligned_cols=131 Identities=24% Similarity=0.224 Sum_probs=72.0
Q ss_pred CcccEEecCCCcCc-CCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 101 PHLMYLNLSCNVLY-GNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|++++|++++.+|..++.+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45666666666665 55665556666666666666665533 4555556666666666665544555555555555555
Q ss_pred ccCcccCCCCC--CcccccccccEEEecccccccccC---cccccccccccccccccccc
Q 043316 180 LCHNNFSGRIP--PSLGNLSNLAYLYLNNNSLFGSIP---NVMGNLNSLSILDLSQNQLR 234 (1031)
Q Consensus 180 L~~n~l~~~ip--~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 234 (1031)
|++|.+++ +| ..++++++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 55555552 22 445555555555555555553222 24455555555555555544
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=158.29 Aligned_cols=133 Identities=23% Similarity=0.186 Sum_probs=82.4
Q ss_pred CCcCcEeeCCCCccc-CCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 124 LSKLRALDLGNNQLS-GVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 124 l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
.++|++|+|++|+++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367788888888877 67777777777777777777777643 566666667777777776665566656566666666
Q ss_pred Eeccccccccc-CcccccccccccccccccccccccC---ccccccCcccEEEeecCcCC
Q 043316 203 YLNNNSLFGSI-PNVMGNLNSLSILDLSQNQLRGSIP---FSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 203 ~l~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~N~l~ 258 (1031)
++++|++++.. +..++.+++|++|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 66666665321 1445555555555555555553222 24444455555555544443
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.65 E-value=5.3e-16 Score=176.62 Aligned_cols=264 Identities=11% Similarity=0.090 Sum_probs=159.6
Q ss_pred ccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceec
Q 043316 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420 (1031)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 420 (1031)
..++.+.+.+ .++.+....|.+. +|+.+.+.+| ++.+...+|.++ +|+.+.+.. .+..+.+.+|.++.+|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4455555543 3444445556654 5777777655 554555566663 566666664 555566666666666666666
Q ss_pred cccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCC
Q 043316 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGK 500 (1031)
Q Consensus 421 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 500 (1031)
.+|++..+...+|. ..+|+.+.|.. .++.+...+|.+++ +|+.+++.+| ++.+
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~-~l~~I~~~aF~~~~------------------------~L~~l~l~~~-l~~I 240 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPV-TLKEIGSQAFLKTS------------------------QLKTIEIPEN-VSTI 240 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCT-TCCEECTTTTTTCT------------------------TCCCEECCTT-CCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCC-chheehhhHhhCCC------------------------CCCEEecCCC-ccCc
Confidence 66666666666665 35666666653 25544444444444 4444444443 3334
Q ss_pred ChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCC-----CCCcccccCCCccceecccCcccCCCCch
Q 043316 501 IPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS-----SSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575 (1031)
Q Consensus 501 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 575 (1031)
...+|.+ .+|+.+.+ .|.++.....+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. |.++.+...
T Consensus 241 ~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 4444544 45555555 23344344556666666666666665543 3455667777777777777 446666667
Q ss_pred hhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCC-cceEEecccccc
Q 043316 576 EFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMR-SLSRIDIAYNEL 641 (1031)
Q Consensus 576 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l 641 (1031)
+|.++.+|+.++|..| ++...+..|.++ +|+.+++++|.+..+.+..|..++ +++.|.+..|.+
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 7777777777777554 554556677777 788888888877777777777764 577777766543
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.65 E-value=9.3e-17 Score=156.56 Aligned_cols=128 Identities=23% Similarity=0.195 Sum_probs=83.8
Q ss_pred CCcccEEecCCCcCc-CCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 100 FPHLMYLNLSCNVLY-GNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|++++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356777777777776 67777777777777777777777644 566667777777777777765566666666666666
Q ss_pred eccCcccCCC-CCCcccccccccEEEecccccccccC---ccccccccccccccc
Q 043316 179 TLCHNNFSGR-IPPSLGNLSNLAYLYLNNNSLFGSIP---NVMGNLNSLSILDLS 229 (1031)
Q Consensus 179 ~L~~n~l~~~-ip~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~l~~L~~L~L~ 229 (1031)
++++|.+++. .|..++++++|++|++++|.+++..+ ..++.+++|++||++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6666666642 23556666666666666666664333 345566666666654
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=172.39 Aligned_cols=251 Identities=10% Similarity=0.090 Sum_probs=131.8
Q ss_pred cccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccc
Q 043316 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSL 415 (1031)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 415 (1031)
+|.++ +|+.+.+.++ ++.+....|.+. +|+.+.+.+ .++.+.+.+|.++++|+.+++.+|+++.+....|. ..+|
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 34443 4555555544 444444455553 466666654 45444555666666666666666666666666666 3667
Q ss_pred cceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCC
Q 043316 416 ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495 (1031)
Q Consensus 416 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N 495 (1031)
+.+.+. +++..+...+|..+++|+.+++..| ++.+...+|.+ ..|+.+.+. +.+......+|.++++|+.+++.+|
T Consensus 206 ~~l~lp-~~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 206 EEVLLP-VTLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp SEEECC-TTCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESS
T ss_pred CEEEeC-CchheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCc
Confidence 777766 3366666777777777777777653 45455555544 344444442 3333333445555555566655555
Q ss_pred cccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCch
Q 043316 496 HIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575 (1031)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 575 (1031)
.+.. +.+....+.+|.++++|+.++|. |.++.+...+|.++++|+.++|..| ++.+.+.
T Consensus 282 ~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 282 TFND-------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CCCC-------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred cccC-------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 4430 00012233445555555555555 2344344445555555555555333 4444445
Q ss_pred hhccccccCceeccCcccCCcCCccccCcc-cchhhhcCCCcc
Q 043316 576 EFEKLIHLSELDLSHNFLQGEIPPQICNME-SLEELNLSHNNL 617 (1031)
Q Consensus 576 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l 617 (1031)
+|.++ +|+.+++++|.+....+..|..++ +++.|++..|.+
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 55555 555555555555544444454442 455555554443
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.1e-16 Score=158.24 Aligned_cols=127 Identities=26% Similarity=0.349 Sum_probs=91.8
Q ss_pred eeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcc
Q 043316 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592 (1031)
Q Consensus 513 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 592 (1031)
.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4455555554 3343322 46777777777776 566677777777777777777777777777777777777777777
Q ss_pred cCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccC
Q 043316 593 LQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 593 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
|++..|..|..+++|+.|+|++|+|+.+.+..|..+++|+.|++++|+|.|
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 776666777778888888888888887777778888888888888888876
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-16 Score=154.86 Aligned_cols=84 Identities=24% Similarity=0.244 Sum_probs=37.9
Q ss_pred CcCcEeeCCCCccc-CCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEE
Q 043316 125 SKLRALDLGNNQLS-GVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLY 203 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~ 203 (1031)
++|++|++++|.++ +.+|..++.+++|++|++++|.+++. ..++.+++|++|+|++|.+++.+|..++++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 44444444445555555444444422 3344444444444444444433343333344444444
Q ss_pred ecccccc
Q 043316 204 LNNNSLF 210 (1031)
Q Consensus 204 l~~n~l~ 210 (1031)
+++|+++
T Consensus 95 ls~N~i~ 101 (149)
T 2je0_A 95 LSGNKIK 101 (149)
T ss_dssp CTTSCCC
T ss_pred CCCCcCC
Confidence 4444443
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-15 Score=155.08 Aligned_cols=107 Identities=28% Similarity=0.356 Sum_probs=45.5
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
+|++|+|++|.++ .+|..+.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4444444444444 344444444444444444444443333344444444444444444443333334444444444444
Q ss_pred CcccCCCCCCcccccccccEEEeccccc
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSL 209 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l 209 (1031)
+|.+++..+..|.++++|++|+|++|.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 4444422222333344444444444433
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-17 Score=172.07 Aligned_cols=135 Identities=23% Similarity=0.290 Sum_probs=76.1
Q ss_pred CCCcccEEecCCCcCcCCCcc------ccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCc
Q 043316 99 SFPHLMYLNLSCNVLYGNIPP------QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKL 172 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~------~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 172 (1031)
....++.++++.+.++|.+|+ .++.+++|++|+|++|++++ +| .++++++|++|++++|+++ .+|..++.+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344555666666666666554 66666666666666666664 45 5666666666666666665 455555555
Q ss_pred ccCceeeccCcccCCCCCCcccccccccEEEecccccccccC-cccccccccccccccccccccccC
Q 043316 173 SLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSIP 238 (1031)
Q Consensus 173 ~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p 238 (1031)
++|++|+|++|++++ +| .++++++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 556666666665553 34 45555555555555555542111 244555555555555555544433
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-15 Score=152.61 Aligned_cols=132 Identities=30% Similarity=0.341 Sum_probs=85.4
Q ss_pred ceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCc
Q 043316 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591 (1031)
Q Consensus 512 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 591 (1031)
+.+++++|+++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444455544 233222 246666666666666555555666667777777777776666666667777777777777
Q ss_pred ccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 592 FLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 592 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
+|++..+..+..+++|++|+|++|+|+++.+..|..+++|++|++++|+++|..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7775555556677777777777777777666666777777777777777776554
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.60 E-value=5.7e-16 Score=171.62 Aligned_cols=143 Identities=12% Similarity=0.147 Sum_probs=102.2
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhh-hh---------hhcHH--------HHHHHHHHHhcCCCCce
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLF-DE---------MADQD--------EFLNEVLALTEIRHRNI 821 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~---------~~~~~--------~~~~Ei~~l~~l~h~ni 821 (1031)
-|++.++||+|++|.||+|...+|+.||||+++..... .. ..... ...+|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38899999999999999999889999999987543210 00 00011 12345666666644433
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
.-..-+... ..++||||++|++|.++... .....++.|++.++.|||+. |||||||||.|||++++
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREE 241 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEE
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCC
Confidence 221111111 23799999999888765432 23457889999999999999 99999999999999887
Q ss_pred Cc----------eEEeccccccccC
Q 043316 902 HE----------AHVSDFGIAKFLN 916 (1031)
Q Consensus 902 ~~----------~kl~Dfg~a~~~~ 916 (1031)
+. +.|+||+-+....
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCcccccccccceEEEEeCCcccCC
Confidence 73 8999999887643
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2.1e-17 Score=169.68 Aligned_cols=155 Identities=21% Similarity=0.328 Sum_probs=79.5
Q ss_pred cccCCcCcEeeCCCCcccCCCCc------cccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQ------EIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLG 194 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~------~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~ 194 (1031)
+.....++.++++.+.++|.+|. .++.+++|++|++++|++++ +| .++.+++|++|+|++|.++ .+|..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~-- 88 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENL-- 88 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSH--
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccch--
Confidence 45556677777777777766664 45555555555555555542 44 4444444444444444444 34444
Q ss_pred ccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCC-ccccccccccc
Q 043316 195 NLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP-SVIGNLKSLFE 273 (1031)
Q Consensus 195 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~ 273 (1031)
++.+++|++|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++
T Consensus 89 ----------------------~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 89 ----------------------DAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp ----------------------HHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred ----------------------hhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 4444444444444444442 33 34444455555555555443221 24455555555
Q ss_pred cccccccccccCCc----------ccccCCCCCeeeeccCccC
Q 043316 274 LDLSENQLFGSIPL----------SFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 274 L~Ls~N~l~~~~p~----------~~~~l~~L~~L~L~~N~l~ 306 (1031)
|++++|.+++.+|. .+..+++|+.|+ +|.++
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 55555555544333 255666666665 45544
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.3e-15 Score=150.23 Aligned_cols=134 Identities=24% Similarity=0.269 Sum_probs=86.1
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCcc
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQE 144 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 144 (1031)
|.|.+|.|+..+ ++ .+|. .-.++|++|++++|++++..+..++.+++|++|+|++|++++..+..
T Consensus 7 C~~~~l~~~~~~-l~-----------~~p~---~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNSKG-LT-----------SVPT---GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCSSC-CS-----------SCCT---TCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecCCC-Cc-----------cCCC---CCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 789999996532 11 1222 12356777777777777555555677777777777777777555555
Q ss_pred ccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccccccccc
Q 043316 145 IGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSI 213 (1031)
Q Consensus 145 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~ 213 (1031)
++.+++|++|++++|++++..|..++.+++|++|+|++|++++..+..+.++++|++|++++|.+++..
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 677777777777777777544445666677777777777766433344566666666666666666433
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.2e-14 Score=162.74 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=38.7
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGL 324 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 324 (1031)
++.+...+|.++.+|+.+.|..+ ++..-..+|.++++|+.+++.++ ++..-..+|.++.+|+.+.+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~ 124 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILL 124 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcc
Confidence 34444566777777887777643 55444557777777777777543 33233345555555554443
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.9e-15 Score=148.15 Aligned_cols=131 Identities=18% Similarity=0.265 Sum_probs=78.9
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCC-cCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCcc-ccCccc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLS-KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLE-IGKLSL 174 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~ 174 (1031)
+.+.++|++|++++|+++ .+|. +..+. +|++|+|++|.+++. ..++.+++|++|++++|++++ +|+. ++.+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCC
Confidence 455666777777777776 3443 44444 677777777776643 456666666666666666663 3433 366666
Q ss_pred CceeeccCcccCCCCCC--cccccccccEEEecccccccccCcc----cccccccccccccccccc
Q 043316 175 INVLTLCHNNFSGRIPP--SLGNLSNLAYLYLNNNSLFGSIPNV----MGNLNSLSILDLSQNQLR 234 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~--~~~~l~~L~~L~l~~n~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 234 (1031)
|++|+|++|.++ .+|. .++++++|++|++++|.++ .+|.. ++.+++|++||+++|...
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 666666666664 4554 5666666666666666665 34443 555566666666655544
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.4e-14 Score=159.66 Aligned_cols=318 Identities=11% Similarity=0.044 Sum_probs=172.2
Q ss_pred ccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCc
Q 043316 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360 (1031)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 360 (1031)
++.+-..+|.++++|+.+.+.. .++..-..+|.++++|+.+++..+ ++..-...|.++++|+.+.+..+ +.......
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 4444456788888888888864 355444556666777776666543 43333445666666666555433 33333334
Q ss_pred cCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCC
Q 043316 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440 (1031)
Q Consensus 361 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 440 (1031)
|.....++........ .....+|.++++|+.+.+.++ +..+....|.++.+|+.+.+
T Consensus 136 F~~~~~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l-------------------- 192 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVT--VIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKL-------------------- 192 (394)
T ss_dssp TTTCCCSEEECCTTCC--EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCC--------------------
T ss_pred eecccccccccCcccc--ccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEc--------------------
Confidence 4444332222222111 122334555555555555432 23333444444444554444
Q ss_pred eeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeeccccc
Q 043316 441 FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520 (1031)
Q Consensus 441 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 520 (1031)
..| ++.+...+|.+...|+.+.+..+... +.+.+....+|+.+.+..+ +..+....|.+...|+.+.+..+.
T Consensus 193 ----~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~ 264 (394)
T 4fs7_A 193 ----PRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNK 264 (394)
T ss_dssp ----CTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTT
T ss_pred ----CCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCc
Confidence 433 34444444444444444444433221 2222333456666666543 233445556666666666666654
Q ss_pred ccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcc
Q 043316 521 LSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ 600 (1031)
Q Consensus 521 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 600 (1031)
.+ .....|..+..++.+....+.+. ...|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++.....+
T Consensus 265 ~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 265 LR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp CE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 43 44556666666766666655432 245666667777776654 55455666777777777777544 55444566
Q ss_pred ccCcccchhhhcCCCccCCCCccccccCCcceEEecccc
Q 043316 601 ICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639 (1031)
Q Consensus 601 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 639 (1031)
|.++.+|+.+++..| ++.+...+|..+++|+.+++..+
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 777777777777655 66666677777777777776544
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.52 E-value=7.5e-15 Score=147.40 Aligned_cols=132 Identities=25% Similarity=0.280 Sum_probs=59.1
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccc-cceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLT-CLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNL 199 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L 199 (1031)
+.++.+|++|++++|+++ .+|. +..+. +|++|++++|++++ + .. ++++++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~------------------------l~~l~~L 66 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DG------------------------FPLLRRL 66 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CC------------------------CCCCSSC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cc------------------------cccCCCC
Confidence 445555566666666555 3332 33333 45555555554442 1 23 3444444
Q ss_pred cEEEecccccccccCcccccccccccccccccccccccCc--cccccCcccEEEeecCcCCCCCCc----cccccccccc
Q 043316 200 AYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF--SLANLSNLGILYLYKNSLFGFIPS----VIGNLKSLFE 273 (1031)
Q Consensus 200 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~ 273 (1031)
++|++++|++++..|..++.+++|++|+|++|+++ .+|. .+..+++|+.|++++|.++. +|. .+..+++|+.
T Consensus 67 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 67 KTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp CEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSE
T ss_pred CEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccce
Confidence 44444444444222222244444444444444443 2333 34444444555555554442 222 2445555555
Q ss_pred ccccccccc
Q 043316 274 LDLSENQLF 282 (1031)
Q Consensus 274 L~Ls~N~l~ 282 (1031)
||+++|.+.
T Consensus 145 Ld~~~n~~~ 153 (176)
T 1a9n_A 145 LDFQKVKLK 153 (176)
T ss_dssp ETTEECCHH
T ss_pred eCCCcCCHH
Confidence 555555443
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.46 E-value=8.1e-14 Score=138.76 Aligned_cols=109 Identities=27% Similarity=0.375 Sum_probs=74.3
Q ss_pred cceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCC
Q 043316 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSH 614 (1031)
Q Consensus 535 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 614 (1031)
.+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456666666666 3554443 5667777777777666666677777777777777777755555566777777777777
Q ss_pred CccCCCCccccccCCcceEEecccccccCCCC
Q 043316 615 NNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 615 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|+|+++.+..|..+++|++|++++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 77777766667777777777777777776544
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.4e-13 Score=134.65 Aligned_cols=103 Identities=29% Similarity=0.373 Sum_probs=72.7
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 184 (1031)
.+++++|+++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4566666664 6666554 677777887777776667777777777777777777774333345777777777777777
Q ss_pred cCCCCCCcccccccccEEEecccccc
Q 043316 185 FSGRIPPSLGNLSNLAYLYLNNNSLF 210 (1031)
Q Consensus 185 l~~~ip~~~~~l~~L~~L~l~~n~l~ 210 (1031)
+++..|..|.++++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 77444445777788888888888776
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.43 E-value=4.2e-13 Score=133.51 Aligned_cols=104 Identities=26% Similarity=0.275 Sum_probs=66.8
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 184 (1031)
.+++++|.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 3444455554 4555443 566777777777776666667777777777777777764444445667777777777777
Q ss_pred cCCCCCCcccccccccEEEeccccccc
Q 043316 185 FSGRIPPSLGNLSNLAYLYLNNNSLFG 211 (1031)
Q Consensus 185 l~~~ip~~~~~l~~L~~L~l~~n~l~~ 211 (1031)
+++..|..|.++++|++|+|++|.++.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 775444557777777777777777663
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.2e-13 Score=136.07 Aligned_cols=106 Identities=25% Similarity=0.379 Sum_probs=63.9
Q ss_pred ceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCC
Q 043316 536 QYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHN 615 (1031)
Q Consensus 536 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 615 (1031)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45556666554 4444443 55666666666666555666666666666666666666444444566666666666666
Q ss_pred ccCCCCccccccCCcceEEecccccccCC
Q 043316 616 NLFDLIPGCFEEMRSLSRIDIAYNELQGP 644 (1031)
Q Consensus 616 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 644 (1031)
+|+++.+..|..+++|++|++++|+|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 66666555566666666666666666653
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-11 Score=141.66 Aligned_cols=319 Identities=12% Similarity=0.141 Sum_probs=147.2
Q ss_pred CCCCccccccc-cccccccccccccccCCcccccCCCCCeeeeccCc---cCCCCCCCCCChhhhhhhhccccccCCCCc
Q 043316 259 GFIPSVIGNLK-SLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNS---LSGSIPPTQGNLEALSELGLYINQLDGVIP 334 (1031)
Q Consensus 259 ~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 334 (1031)
.+...+|.+.+ .|+.+.+..+ ++..-..+|.++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++....
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 33455677764 5888888654 554556688888888888887764 44333445666666665555433 332333
Q ss_pred ccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcc
Q 043316 335 PSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTS 414 (1031)
Q Consensus 335 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 414 (1031)
..|..+.+|+.+.+..+ +.......|..+.+|+.+.+.++ +..+...+|.+ ..
T Consensus 131 ~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-------------------------~~~I~~~aF~~-~~ 183 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-------------------------VTAIEERAFTG-TA 183 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-------------------------CCEECTTTTTT-CC
T ss_pred hhhhhhcccccccccce-eeeecccceecccccccccccce-------------------------eeEeccccccc-cc
Confidence 44555555555555432 22233334455555555555433 22233333332 23
Q ss_pred ccceeccccccccccccccCCCCCCCeeccccccccCcccccccC-------------CCccccccCcccccCCCCCCCc
Q 043316 415 LERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRN-------------FPKLGTFNASMNNIYGSIPPEI 481 (1031)
Q Consensus 415 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-------------~~~L~~L~l~~N~i~~~~p~~~ 481 (1031)
|+.+.+.. .+..+...+|..+.+++......+.........+.. ...+..+.+. +.+......+|
T Consensus 184 l~~i~ip~-~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF 261 (394)
T 4gt6_A 184 LTQIHIPA-KVTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAF 261 (394)
T ss_dssp CSEEEECT-TCCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTT
T ss_pred eeEEEECC-cccccccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcC-CcceEccccee
Confidence 44444432 123334444444444444444433332221111111 1111111111 11222223345
Q ss_pred cCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccce
Q 043316 482 GDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHY 561 (1031)
Q Consensus 482 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 561 (1031)
.++.+|+.+.+.++... +...+|.++.+|+.+.+. +.++.....+|.++.+|+.++|..+ ++.+...+|.++.+|+.
T Consensus 262 ~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~ 338 (394)
T 4gt6_A 262 DSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLER 338 (394)
T ss_dssp TTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred eecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCE
Confidence 55555555555544332 444555555555555553 2333334445555555555555543 33334445555555555
Q ss_pred ecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCC
Q 043316 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHN 615 (1031)
Q Consensus 562 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 615 (1031)
+.+..+ ++.+...+|.++.+|+.+++.+|.... ..+.....|+.+.+..|
T Consensus 339 i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 339 IAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp EEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC--------
T ss_pred EEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCC
Confidence 555433 444444555555555555555554321 23344444444444433
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-11 Score=140.58 Aligned_cols=288 Identities=12% Similarity=0.128 Sum_probs=143.5
Q ss_pred CceEEcccCCCcCccCCccCcccccceEEccccc---cCCCccccccCCCCCceEeccCcccCCcCchhccCCcccccee
Q 043316 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNH---LSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLR 419 (1031)
Q Consensus 343 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 419 (1031)
|+.+.+.++ ++.+-..+|.++.+|+.+.+.+|. ++.+...+|.++.+|+.+.+..+ ++.+....|.++.+|+.+.
T Consensus 66 L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 444444322 333333444444444444444432 33233344444555554444332 3334444455555555555
Q ss_pred ccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccC
Q 043316 420 FNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499 (1031)
Q Consensus 420 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 499 (1031)
+.. .+..+...+|..+..|+.+.+..+ ++.+...+|.+ ..|+.+.+..+- .......|..+.+++......+....
T Consensus 144 lp~-~~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~-~~i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPE-GVTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV-TRIGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC-CEECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccc-eeeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcc-cccccchhhhccccceeccccccccc
Confidence 532 234444445555555555555432 34444444433 234444443221 11223344445555555444433321
Q ss_pred CChhhh-------------hccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccC
Q 043316 500 KIPVQF-------------EKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566 (1031)
Q Consensus 500 ~~p~~~-------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 566 (1031)
.....+ .....+..+.+. +.++.....+|.++..|+.+.+..+..+ +...+|.++++|+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~- 296 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS- 296 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-
T ss_pred ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-
Confidence 110000 011122222222 2233334456667777777777655443 455667777777777775
Q ss_pred cccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccc
Q 043316 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNEL 641 (1031)
Q Consensus 567 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 641 (1031)
+.++.+...+|.++.+|+.++|..+ ++.....+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|..
T Consensus 297 ~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 297 SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 4455555666777777777777654 44344566777777777777543 6666667777777777777776643
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=6.2e-14 Score=157.96 Aligned_cols=93 Identities=20% Similarity=0.121 Sum_probs=50.4
Q ss_pred ccccEEEeccccccc----ccCcccccccccccccccccccccc----cCccccccCcccEEEeecCcCCCC----CCcc
Q 043316 197 SNLAYLYLNNNSLFG----SIPNVMGNLNSLSILDLSQNQLRGS----IPFSLANLSNLGILYLYKNSLFGF----IPSV 264 (1031)
Q Consensus 197 ~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~ 264 (1031)
++|++|+|++|.++. .++..+..+++|++|+|++|+++.. ++..+...++|+.|+|++|.++.. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 455555555555542 2333344555566666666665532 234455556666666666666532 2233
Q ss_pred ccccccccccccccccccccCCccc
Q 043316 265 IGNLKSLFELDLSENQLFGSIPLSF 289 (1031)
Q Consensus 265 ~~~l~~L~~L~Ls~N~l~~~~p~~~ 289 (1031)
+...++|++|+|++|.|+......+
T Consensus 235 L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHhCCCCCEEeccCCCCCHHHHHHH
Confidence 4445667777777777664433333
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-13 Score=154.36 Aligned_cols=159 Identities=23% Similarity=0.244 Sum_probs=99.8
Q ss_pred CCCcEEEeeCCcccCCChhhhhcc-----ccCceeecccccccCCCcccc-cccCccceeecCcCcCCCCCcccc-----
Q 043316 485 SKLQVLDLSSNHIVGKIPVQFEKL-----FSLNKLILNLNQLSGGVPLEF-GSLTELQYLDLSANKLSSSIPKSM----- 553 (1031)
Q Consensus 485 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~----- 553 (1031)
++|+.|+|++|.|+......+... ++|+.|+|++|.++......+ ..+++|++|+|++|.|++.....+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777777664444444433 567777777777664333222 235667777777777764433333
Q ss_pred cCCCccceecccCcccCCC----CchhhccccccCceeccCcccCCc----CCccccCcccchhhhcCCCccCCCC----
Q 043316 554 GNLSKLHYLNLSNNQFNHK----IPTEFEKLIHLSELDLSHNFLQGE----IPPQICNMESLEELNLSHNNLFDLI---- 621 (1031)
Q Consensus 554 ~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~---- 621 (1031)
...++|++|+|++|.|+.. ++..+..+++|++|||++|+|++. ++..+...++|++|+|++|.|++..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2356777777777777542 334456677788888888877642 2445566677888888888876532
Q ss_pred ccccccCCcceEEecccccccC
Q 043316 622 PGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 622 ~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
...+...++|++||+++|+++.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHhCCCCCEEeccCCCCCH
Confidence 2334456778888888887764
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.23 E-value=1.3e-11 Score=138.50 Aligned_cols=92 Identities=22% Similarity=0.193 Sum_probs=56.3
Q ss_pred CccccccCCcCcEeeCCC-CcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccc
Q 043316 117 IPPQISNLSKLRALDLGN-NQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGN 195 (1031)
Q Consensus 117 ~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~ 195 (1031)
+|. |..+++|++|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|++|++|++|+|++|+|++..|..+..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 555 56666666666664 6666554555666666666666666666555556666666666666666666433334444
Q ss_pred cccccEEEecccccc
Q 043316 196 LSNLAYLYLNNNSLF 210 (1031)
Q Consensus 196 l~~L~~L~l~~n~l~ 210 (1031)
++ |++|+|++|.+.
T Consensus 103 ~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 103 LS-LQELVLSGNPLH 116 (347)
T ss_dssp CC-CCEEECCSSCCC
T ss_pred CC-ceEEEeeCCCcc
Confidence 44 777777777765
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.5e-11 Score=138.05 Aligned_cols=101 Identities=27% Similarity=0.243 Sum_probs=51.7
Q ss_pred eeccCc-ccCCCCCCcccccccccEEEecc-cccccccCcccccccccccccccccccccccCccccccCcccEEEeecC
Q 043316 178 LTLCHN-NFSGRIPPSLGNLSNLAYLYLNN-NSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN 255 (1031)
Q Consensus 178 L~L~~n-~l~~~ip~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 255 (1031)
++++++ +++ .+|. |..+++|++|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455554 555 3555 55555555555553 5555444455555555555555555555544545555555555555555
Q ss_pred cCCCCCCccccccccccccccccccc
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQL 281 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l 281 (1031)
+|++..+..|..++ |+.|+|++|.+
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCc
Confidence 55544433333333 44444444443
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=9.8e-11 Score=125.63 Aligned_cols=148 Identities=15% Similarity=0.083 Sum_probs=115.1
Q ss_pred HHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCC
Q 043316 754 IIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 754 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~ 832 (1031)
+......|+.....+.|+.+.||++.. .++.+++|+...... .....+.+|+.+++.+. +..+.++++++.+.+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~----~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~ 83 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYK----GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG 83 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGT----TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccC----CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC
Confidence 345567888888889999999999976 468999999865321 12335778999988884 677889999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC-------------------------------
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD------------------------------- 881 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------- 881 (1031)
..|+||||++|.++.+.... ......++.+++++++.||+.
T Consensus 84 ~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (263)
T 3tm0_A 84 WSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDC 155 (263)
T ss_dssp EEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSG
T ss_pred ceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccc
Confidence 99999999999998776421 123447889999999999981
Q ss_pred -------------------------CCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 882 -------------------------CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 882 -------------------------~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
..+.++|+|++|.||+++.++.+.|+||+.+..
T Consensus 156 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 156 ENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 013589999999999998765567999987753
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.8e-12 Score=136.95 Aligned_cols=144 Identities=17% Similarity=0.128 Sum_probs=65.4
Q ss_pred CCCccceeEeCCC-CCEEEEEecC---CccccccCCccccCCCcccEEecCCCcCcCCCccc-cccCCcCcE--eeCCCC
Q 043316 63 SPCTWFGIFCNLV-GRVISISLSS---LGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQ-ISNLSKLRA--LDLGNN 135 (1031)
Q Consensus 63 ~~C~w~gv~c~~~-~~v~~l~l~~---~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~-~~~l~~L~~--L~l~~n 135 (1031)
..|+|.|+.|+.. .+|+.+..++ .++.|.+.+..+..++. .|..+.|..++.++-+ +...+.|+. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 4689999999865 4676665544 34455555433333322 2222333333322211 333344444 455555
Q ss_pred cccCCCCc----cccccccceEEEeeccccCC--CCCccccCcccCceeeccCcccCCCCCCcccccc--cccEEEeccc
Q 043316 136 QLSGVIPQ----EIGHLTCLRMLYFDVNHLHG--SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLS--NLAYLYLNNN 207 (1031)
Q Consensus 136 ~l~~~~p~----~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~--~L~~L~l~~n 207 (1031)
... .++. ...++++|+.|+|++|++++ .+|..++.+++|+.|+|++|++++. ..+..++ +|++|+|++|
T Consensus 154 ~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~N 230 (267)
T 3rw6_A 154 RRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGN 230 (267)
T ss_dssp SHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTS
T ss_pred HHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCC
Confidence 322 1221 11334455555555555554 3334444444555555555544422 2223232 4444444444
Q ss_pred cccc
Q 043316 208 SLFG 211 (1031)
Q Consensus 208 ~l~~ 211 (1031)
.+.+
T Consensus 231 pl~~ 234 (267)
T 3rw6_A 231 SLCD 234 (267)
T ss_dssp TTGG
T ss_pred cCcc
Confidence 4443
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.03 E-value=3e-09 Score=120.73 Aligned_cols=145 Identities=16% Similarity=0.173 Sum_probs=87.6
Q ss_pred CCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCc
Q 043316 479 PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSK 558 (1031)
Q Consensus 479 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 558 (1031)
..+....+|+.+.+..+ +..+...+|.+...|+.+.+..+ ++.....+|.++.+|+.+.+..+ ++.....+|.++++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34455566666666544 33345556666666776666554 44444556666677777766543 44344556666777
Q ss_pred cceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccC
Q 043316 559 LHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEM 628 (1031)
Q Consensus 559 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 628 (1031)
|+.+.+.++.++.+...+|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+..+ ++.+...+|...
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 777777766666566666777777777777544 44344556666677777666543 555555555544
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.00 E-value=5.4e-09 Score=118.58 Aligned_cols=147 Identities=16% Similarity=0.092 Sum_probs=86.8
Q ss_pred hhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCC
Q 043316 407 KSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK 486 (1031)
Q Consensus 407 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~ 486 (1031)
..|....+|+.+.+.. .+..+...+|..+..|+.+.+..+ ++.+...+|.+...|+.+.+..+ +.......|.++.+
T Consensus 211 ~~f~~~~~l~~i~~~~-~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITS-GVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCT-TCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeecc-ceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 3344444444444432 233444445555555555555443 44444555555555555555422 33333456677777
Q ss_pred CcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCc
Q 043316 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSK 558 (1031)
Q Consensus 487 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 558 (1031)
|+.+++.++.++.+...+|.++.+|+.+.|..+ ++.....+|.++.+|+.+.+..+ ++.+...+|.++..
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSC
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCC
Confidence 788888777777666777888888888887654 55455667888888888888655 55455667766543
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.98 E-value=5.3e-10 Score=119.73 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=99.7
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc--eeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN--IIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~~~~~~~~~~~lv 837 (1031)
++.+....+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 34443333456669999998777888999997543 1234668888888875433 56789988888889999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC-----------------------------------
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC----------------------------------- 882 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 882 (1031)
|||++|.++. ... . ....++.++++.++.||+..
T Consensus 94 ~e~i~G~~l~--~~~------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 94 LGEVPGQDLL--SSH------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EECCSSEETT--TSC------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEecCCcccC--cCc------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 9999998884 211 1 12357778888888888741
Q ss_pred --------------------CCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 883 --------------------LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 883 --------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
.+.++|+|++|.||+++.++.+.|+|||.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11389999999999998776677999998764
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.95 E-value=1e-10 Score=130.46 Aligned_cols=83 Identities=12% Similarity=0.130 Sum_probs=41.0
Q ss_pred ccccccccccccccccccCcccc---ccCcccEEEeecCcCCCC----CCccccccccccccccccccccccCCccccc-
Q 043316 220 LNSLSILDLSQNQLRGSIPFSLA---NLSNLGILYLYKNSLFGF----IPSVIGNLKSLFELDLSENQLFGSIPLSFSN- 291 (1031)
Q Consensus 220 l~~L~~L~L~~N~l~~~~p~~l~---~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~- 291 (1031)
+++|++|+|++|.+....+..+. .+++|++|+|+.|.+++. ++..+.++++|+.|+|++|.++...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 45555555555555432222221 345666666666665542 2233345566666666666655332222222
Q ss_pred CCCCCeeeeccCc
Q 043316 292 LSSLTLMSLFNNS 304 (1031)
Q Consensus 292 l~~L~~L~L~~N~ 304 (1031)
+ ...++++.++
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 1 2446666665
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.6e-10 Score=128.93 Aligned_cols=64 Identities=19% Similarity=0.184 Sum_probs=39.3
Q ss_pred ccCcccEEEeecCcCCCCCCcccc---cccccccccccccccccc----CCcccccCCCCCeeeeccCccC
Q 043316 243 NLSNLGILYLYKNSLFGFIPSVIG---NLKSLFELDLSENQLFGS----IPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 243 ~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
.+++|+.|+|++|.++...+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 356777777777776543322222 466777777777777643 2333455677777777777665
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.2e-09 Score=118.44 Aligned_cols=143 Identities=15% Similarity=0.283 Sum_probs=107.1
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEcc--chhhhhhhhcHHHHHHHHHHHhcCC--CCceeeeeeeEecC---CeeE
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFN--SQLLFDEMADQDEFLNEVLALTEIR--HRNIIKFHGFCSNA---QHSF 835 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~---~~~~ 835 (1031)
..+.++.|.++.||++... +..+++|+.. .... ......+.+|+.+++.+. +..++++++++.+. +..|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~---~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL---LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC---CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 4567999999999999875 4688899876 3221 122456778999998886 45688999988776 5689
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC---------------------------------
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC--------------------------------- 882 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------- 882 (1031)
+||||++|..+.+... ..++..+...++.++++.|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999999988754221 23567788899999999999999731
Q ss_pred ----------------------CCCeeeCCCCCCCeeeCCCCc--eEEeccccccc
Q 043316 883 ----------------------LPPIVHGDISSKNVLLDSEHE--AHVSDFGIAKF 914 (1031)
Q Consensus 883 ----------------------~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 914 (1031)
.+.++|||++|.||+++.++. +.|+||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247899999999999997763 68999999875
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.74 E-value=3.8e-09 Score=115.80 Aligned_cols=184 Identities=21% Similarity=0.213 Sum_probs=121.1
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCc--eeeeeeeEecCC---eeEEE
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRN--IIKFHGFCSNAQ---HSFIV 837 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv 837 (1031)
.+.++.|....||++. +.+++|+.... .....+.+|..+++.+. +.. +.+++......+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999874 46889886432 23567889999988773 322 445555543333 45899
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC------------------------------------
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD------------------------------------ 881 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------ 881 (1031)
||+++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 95 m~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 99999988865322 2356677778888888888888861
Q ss_pred -------------------CCCCeeeCCCCCCCeeeCC--CCceEEeccccccccCCCCCC--cee------------ec
Q 043316 882 -------------------CLPPIVHGDISSKNVLLDS--EHEAHVSDFGIAKFLNPHSSN--WTA------------FA 926 (1031)
Q Consensus 882 -------------------~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~--~~~------------~~ 926 (1031)
..+.++|+|++|.||+++. ...+.|+||+.+..-++.... ... ..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 1135799999999999998 456889999998764321100 000 00
Q ss_pred cccCccc-cccccccCCCccccchhhhHHHHHHHhCCCC
Q 043316 927 GTFGYAA-PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 927 gt~~y~a-PE~~~~~~~~~~sDvwslG~il~elltG~~P 964 (1031)
..+++.. |+.... .....+.|++|.++|++.+|+.+
T Consensus 250 ~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~ 286 (304)
T 3sg8_A 250 NHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMD 286 (304)
T ss_dssp HHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHH
Confidence 0111122 222211 12236899999999999999877
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.47 E-value=1.8e-08 Score=106.36 Aligned_cols=112 Identities=20% Similarity=0.212 Sum_probs=83.4
Q ss_pred cccCCccccCCCcccE--EecCCCcC---cCCCccccccCCcCcEeeCCCCcccC--CCCccccccccceEEEeeccccC
Q 043316 90 GTFQDFSFSSFPHLMY--LNLSCNVL---YGNIPPQISNLSKLRALDLGNNQLSG--VIPQEIGHLTCLRMLYFDVNHLH 162 (1031)
Q Consensus 90 g~~~~~~~~~l~~l~~--L~l~~n~~---~~~~p~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~n~l~ 162 (1031)
+.++-..|...+.|.. ++++.|.. .+.++-...++++|++|+|++|+|++ .+|..++.+++|+.|+|++|+++
T Consensus 130 ~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 130 QALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp TEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred cccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 3333334566667776 77888843 33333333678999999999999997 56778889999999999999998
Q ss_pred CCCCccccCcc--cCceeeccCcccCCCCCC-------cccccccccEEE
Q 043316 163 GSIPLEIGKLS--LINVLTLCHNNFSGRIPP-------SLGNLSNLAYLY 203 (1031)
Q Consensus 163 ~~~p~~~~~l~--~L~~L~L~~n~l~~~ip~-------~~~~l~~L~~L~ 203 (1031)
+. .++..++ +|++|+|++|.+++.+|. .+..+++|+.||
T Consensus 210 ~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 210 SE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp SG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred Cc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 54 4556666 999999999999988874 256677777664
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.38 E-value=3e-08 Score=99.62 Aligned_cols=119 Identities=13% Similarity=0.173 Sum_probs=54.6
Q ss_pred hhhccccCceeecccc-cccCC----CcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhc
Q 043316 504 QFEKLFSLNKLILNLN-QLSGG----VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578 (1031)
Q Consensus 504 ~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 578 (1031)
.+...+.|++|+|++| .+... +...+...++|++|+|++|.|.+..... +...+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~--------------------l~~~L~ 90 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFA--------------------LAEMLK 90 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHH--------------------HHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHH--------------------HHHHHH
Confidence 3444555666666665 55422 1223333455555555555554211111 122233
Q ss_pred cccccCceeccCcccCCc----CCccccCcccchhhhc--CCCccCCCC----ccccccCCcceEEeccccccc
Q 043316 579 KLIHLSELDLSHNFLQGE----IPPQICNMESLEELNL--SHNNLFDLI----PGCFEEMRSLSRIDIAYNELQ 642 (1031)
Q Consensus 579 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 642 (1031)
..+.|++|+|++|.|.+. +...+...++|++|+| ++|.|.... ...+...++|++|++++|.+.
T Consensus 91 ~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 91 VNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred hCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334455555555554422 2333444445555555 455554421 223334456666666666553
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.33 E-value=6.2e-08 Score=97.32 Aligned_cols=114 Identities=13% Similarity=0.141 Sum_probs=77.1
Q ss_pred ccCCCCCcEEEeeCC-cccCC----ChhhhhccccCceeecccccccCC----CcccccccCccceeecCcCcCCCC---
Q 043316 481 IGDSSKLQVLDLSSN-HIVGK----IPVQFEKLFSLNKLILNLNQLSGG----VPLEFGSLTELQYLDLSANKLSSS--- 548 (1031)
Q Consensus 481 ~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~--- 548 (1031)
+...++|++|+|++| .|... +...+...++|++|+|++|+|+.. +...+...++|++|+|++|.|++.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 445677888888888 77532 233445567888888888888743 233445557888888888888743
Q ss_pred -CcccccCCCccceecc--cCcccCCC----CchhhccccccCceeccCcccC
Q 043316 549 -IPKSMGNLSKLHYLNL--SNNQFNHK----IPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 549 -~p~~~~~l~~L~~L~L--s~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
+...+...+.|++|+| ++|.|+.. +.+.+...++|++|+|++|.|.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3455666677888888 77887643 3344555577778888777775
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=3.6e-06 Score=90.17 Aligned_cols=136 Identities=15% Similarity=0.211 Sum_probs=98.7
Q ss_pred ceeecCCCc-cEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEEEec
Q 043316 765 YCIGKGRQG-SVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 765 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
+.+..|..+ .||+.... +++.++||+-... ....+.+|...++.+. +--+.++++++.+++..++|||++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l 102 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI 102 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee
Confidence 346667666 59998654 4678899985432 2456778888888774 334778899999999999999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC---------------------------------------
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC--------------------------------------- 882 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------- 882 (1031)
+|.++.+..... ......++.+++..++.||...
T Consensus 103 ~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 103 PGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp CSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred CCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 998876654322 1234456677777777777420
Q ss_pred ----------------CCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 883 ----------------LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 883 ----------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
.+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999877778999998764
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=7.1e-06 Score=89.53 Aligned_cols=137 Identities=18% Similarity=0.163 Sum_probs=93.9
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCC---ceeeeeeeEe-cCCeeEEEEE
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR---NIIKFHGFCS-NAQHSFIVSE 839 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e 839 (1031)
.+.++.|....||+. ++.++||+.... .....+.+|..+++.+.+. .+.+.+.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~------~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ------QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH------HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc------hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456888999999998 567888885322 2356788999999988642 3566777764 4566789999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC--------------------------------------
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD-------------------------------------- 881 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------- 881 (1031)
|++|..+.+..-. .++..+...++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9999888653111 123334444455555555444432
Q ss_pred -------------------CCCCeeeCCCCCCCeeeCC---CCc-eEEecccccccc
Q 043316 882 -------------------CLPPIVHGDISSKNVLLDS---EHE-AHVSDFGIAKFL 915 (1031)
Q Consensus 882 -------------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~Dfg~a~~~ 915 (1031)
..+.++|+|++|.||+++. ++. +.|+||+.+..-
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235799999999999997 455 489999988754
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=9.5e-05 Score=82.53 Aligned_cols=84 Identities=4% Similarity=-0.021 Sum_probs=55.9
Q ss_pred ccee-ecCCCccEEEEEeC-------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-C--CceeeeeeeEecC-
Q 043316 764 KYCI-GKGRQGSVYKAELP-------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-H--RNIIKFHGFCSNA- 831 (1031)
Q Consensus 764 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h--~niv~l~~~~~~~- 831 (1031)
.+.| +.|....+|+.... +++.+++|+........ ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~-~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP-VFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC-SSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc-cCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 3567 88889999998654 26789999865432000 001134567777777764 2 3577788887665
Q ss_pred --CeeEEEEEeccCCCchh
Q 043316 832 --QHSFIVSEYLDRGSLTT 848 (1031)
Q Consensus 832 --~~~~lv~e~~~~gsL~~ 848 (1031)
+..++||||++|..+.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 46789999999887764
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00014 Score=80.54 Aligned_cols=141 Identities=18% Similarity=0.264 Sum_probs=78.4
Q ss_pred ceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-----CCCceeeee-e--eEecCCeeEE
Q 043316 765 YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-----RHRNIIKFH-G--FCSNAQHSFI 836 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~niv~l~-~--~~~~~~~~~l 836 (1031)
+.++.|..+.||++...+| .+++|+..... ..+..|+.+++.+ ..|.++... | +....+..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~--------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE--------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH--------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH--------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 4466678899999987555 58999986521 1222333433333 234444311 1 2235677899
Q ss_pred EEEeccCCCchh-----------h---cccC---C--cc------ccCCHHHH---------------------------
Q 043316 837 VSEYLDRGSLTT-----------I---LKDD---A--AA------KEFGWNQR--------------------------- 864 (1031)
Q Consensus 837 v~e~~~~gsL~~-----------~---l~~~---~--~~------~~l~~~~~--------------------------- 864 (1031)
||||++|..+.. . ++.. . +. ....|...
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 999999875530 0 0100 0 00 00122111
Q ss_pred ----HHHHHHHHHHHHHhhh----------CCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 865 ----MNVIKGVANALSYLHH----------DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 865 ----~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
..+...+..++++|++ .....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1112234445666653 0234899999999999998888999999998763
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=7.4e-05 Score=84.81 Aligned_cols=79 Identities=15% Similarity=-0.000 Sum_probs=49.4
Q ss_pred cceeecCCCccEEEEEeC-CCcEEEEEEccchhh--hhh-hhcHHHHHHHHHHHhcCCC--C-ceeeeeeeEecCCeeEE
Q 043316 764 KYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLL--FDE-MADQDEFLNEVLALTEIRH--R-NIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~-~~~~~~~~~Ei~~l~~l~h--~-niv~l~~~~~~~~~~~l 836 (1031)
.+.+|.|..+.||++... +++.++||....... ..+ ....+.+.+|.++++.+.. | .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999654 568899998653211 000 1123456778888877632 3 34456554 3445689
Q ss_pred EEEeccCC
Q 043316 837 VSEYLDRG 844 (1031)
Q Consensus 837 v~e~~~~g 844 (1031)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.63 E-value=1.4e-05 Score=77.86 Aligned_cols=83 Identities=18% Similarity=0.214 Sum_probs=43.8
Q ss_pred CCCcEEEeeCCcccCCChhhhhccccCceeeccccc-ccCCCccccccc----CccceeecCcCc-CCCCCcccccCCCc
Q 043316 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ-LSGGVPLEFGSL----TELQYLDLSANK-LSSSIPKSMGNLSK 558 (1031)
Q Consensus 485 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 558 (1031)
.+|+.||++++.|+...-..+.++++|+.|+|++|. +++..-..+..+ ++|++|+|++|. +++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467888888887765444445555666666666653 443322333332 245555555542 44333333444555
Q ss_pred cceecccCc
Q 043316 559 LHYLNLSNN 567 (1031)
Q Consensus 559 L~~L~Ls~N 567 (1031)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00037 Score=75.58 Aligned_cols=76 Identities=18% Similarity=0.150 Sum_probs=60.6
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC---CCceeeeeeeEecCCeeEEEEE
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~~~~~~~~~~~lv~e 839 (1031)
..+.++.|....+|+... +++.++||+.... ....+.+|...++.+. ...++++++++...+..++|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence 345789999999999986 5778899986432 2556788888888773 3568889999888889999999
Q ss_pred eccCCCc
Q 043316 840 YLDRGSL 846 (1031)
Q Consensus 840 ~~~~gsL 846 (1031)
|+++..+
T Consensus 112 ~l~G~~~ 118 (312)
T 3jr1_A 112 ALNKSKN 118 (312)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9998765
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.57 E-value=3e-05 Score=75.67 Aligned_cols=83 Identities=16% Similarity=0.190 Sum_probs=52.2
Q ss_pred ccceEEccccccCCCccccccCCCCCceEeccCcc-cCCcCchhccCC----ccccceecccc-ccccccccccCCCCCC
Q 043316 366 SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH-LFGLIPKSFRNL----TSLERLRFNQN-NLFGKVYEAFGDHPNL 439 (1031)
Q Consensus 366 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~L 439 (1031)
+|+.||++++.++..--..+.++++|+.|+|++|. ++...-..+..+ ++|++|+|++| +|+......+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 46666666666554444455566666666666663 554444445543 35777777776 3666666666777788
Q ss_pred Ceecccccc
Q 043316 440 TFLDLSQNN 448 (1031)
Q Consensus 440 ~~L~Ls~N~ 448 (1031)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 888887764
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00062 Score=77.70 Aligned_cols=76 Identities=14% Similarity=0.175 Sum_probs=47.3
Q ss_pred CCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeecc--ccCcccccccccc---CCCccccchhhhHHHHHH
Q 043316 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG--TFGYAAPEIAHMM---RATEKYDVHSFGVLALEV 958 (1031)
Q Consensus 884 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~sDvwslG~il~el 958 (1031)
+.++|||++|.||+++.++ ++++||+.+..-++. ........ ...|++|+..... ......++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3789999999999998776 999999988754321 11111111 2346666654311 112234555777788877
Q ss_pred HhC
Q 043316 959 IKG 961 (1031)
Q Consensus 959 ltG 961 (1031)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=9.2e-05 Score=73.61 Aligned_cols=110 Identities=12% Similarity=0.122 Sum_probs=56.8
Q ss_pred CCCCcEEEeeCC-cccCC----ChhhhhccccCceeecccccccCCC----cccccccCccceeecCcCcCCCC----Cc
Q 043316 484 SSKLQVLDLSSN-HIVGK----IPVQFEKLFSLNKLILNLNQLSGGV----PLEFGSLTELQYLDLSANKLSSS----IP 550 (1031)
Q Consensus 484 l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~p 550 (1031)
-+.|++|+|++| +|... +...+..-+.|+.|+|++|+|.+.. ...+..-+.|++|+|+.|.|++. +.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 345667777664 55421 2233444456666666666665322 22333445666666666666532 22
Q ss_pred ccccCCCccceecccCc---ccCC----CCchhhccccccCceeccCccc
Q 043316 551 KSMGNLSKLHYLNLSNN---QFNH----KIPTEFEKLIHLSELDLSHNFL 593 (1031)
Q Consensus 551 ~~~~~l~~L~~L~Ls~N---~l~~----~~~~~~~~l~~L~~L~Ls~N~l 593 (1031)
+++..-+.|++|+|++| .+.. .+.+.+..-+.|+.|+++.|.+
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 33444455666666644 2221 1233445555666666665554
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=4.1e-05 Score=76.15 Aligned_cols=89 Identities=21% Similarity=0.265 Sum_probs=47.8
Q ss_pred cccCCCccceecccCcccCCC----CchhhccccccCceeccCcccCCc----CCccccCcccchhhhcCCC---ccCCC
Q 043316 552 SMGNLSKLHYLNLSNNQFNHK----IPTEFEKLIHLSELDLSHNFLQGE----IPPQICNMESLEELNLSHN---NLFDL 620 (1031)
Q Consensus 552 ~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N---~l~~~ 620 (1031)
.+..-+.|++|+|++|+|... +.+.+..-+.|+.|+|++|+|.+. +-..+..-..|++|+|++| .+...
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 334445555555555555422 334445556666666666666532 2233444556777777654 33321
Q ss_pred ----CccccccCCcceEEeccccc
Q 043316 621 ----IPGCFEEMRSLSRIDIAYNE 640 (1031)
Q Consensus 621 ----~~~~~~~l~~L~~L~l~~N~ 640 (1031)
+...+..-+.|+.|+++.|.
T Consensus 145 g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 145 VEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHHhCCCcCeEeccCCC
Confidence 22345556777888776653
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00075 Score=72.62 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=56.2
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-C--CceeeeeeeEecCCeeEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-H--RNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h--~niv~l~~~~~~~~~~~l 836 (1031)
+....+.+|.|..+.||+.+..+|+.|+||+..... ......|.+|...++.+. . --+.+++++. ..++
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~----~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC----cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 445567899999999999999999999999865432 122345778988888774 2 2345555542 2479
Q ss_pred EEEeccCCCc
Q 043316 837 VSEYLDRGSL 846 (1031)
Q Consensus 837 v~e~~~~gsL 846 (1031)
||||++++..
T Consensus 88 v~e~l~~~~~ 97 (288)
T 3f7w_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEeecccCC
Confidence 9999987644
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0039 Score=68.30 Aligned_cols=158 Identities=15% Similarity=0.185 Sum_probs=89.0
Q ss_pred ccHHHHHHHHhccCc-----cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-C-Cce
Q 043316 749 FLYEEIIKAIDDFGE-----KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-H-RNI 821 (1031)
Q Consensus 749 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h-~ni 821 (1031)
...+++......|.. .+.++ |....||++...+|+.+++|+..... ...+.+..|..+++.+. + -.+
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-----~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-----CCHHHHHHHHHHHHHHHHcCCee
Confidence 445556666555643 24566 88889999987778889999986331 12345556777666653 1 124
Q ss_pred eeeeee-----EecCCeeEEEEEeccCCCchh-----h---------cc----cCCc--cccCCHHHH----HHH-----
Q 043316 822 IKFHGF-----CSNAQHSFIVSEYLDRGSLTT-----I---------LK----DDAA--AKEFGWNQR----MNV----- 867 (1031)
Q Consensus 822 v~l~~~-----~~~~~~~~lv~e~~~~gsL~~-----~---------l~----~~~~--~~~l~~~~~----~~i----- 867 (1031)
++++.. ....+..+++|||++|..+.. + ++ .... ....++... ..+
T Consensus 85 p~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred cceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 444443 223556789999998865431 0 00 0000 011121111 001
Q ss_pred ----------HHHHHHHHHHhhhC----CCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 868 ----------IKGVANALSYLHHD----CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 868 ----------~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
...+...++.+.+. ....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111222333221 223678999999999998 5 899999988764
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0025 Score=69.62 Aligned_cols=159 Identities=11% Similarity=0.139 Sum_probs=86.5
Q ss_pred ccHHHHHHHHhccCcc-----ceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-C-Cce
Q 043316 749 FLYEEIIKAIDDFGEK-----YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-H-RNI 821 (1031)
Q Consensus 749 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h-~ni 821 (1031)
+..+++.....+|... +.++.|....+|++...++ .+++|+..... ..+.+..|+.+++.+. + -.+
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCC
Confidence 4456666666667652 3466788899999987555 68899876521 1123345555555442 1 113
Q ss_pred eeeeee------EecCCeeEEEEEeccCCCchhh--------------ccc---C-Ccc--cc---CCHHHHHH------
Q 043316 822 IKFHGF------CSNAQHSFIVSEYLDRGSLTTI--------------LKD---D-AAA--KE---FGWNQRMN------ 866 (1031)
Q Consensus 822 v~l~~~------~~~~~~~~lv~e~~~~gsL~~~--------------l~~---~-~~~--~~---l~~~~~~~------ 866 (1031)
.+++.. ....+..+++++|++|..+... ++. . ... .. ..|.....
T Consensus 80 P~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 159 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 159 (322)
T ss_dssp CCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred CcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHH
Confidence 333321 2234667899999998654220 010 0 000 00 01221100
Q ss_pred ------HHHHHHHHHHHhhhC----CCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 867 ------VIKGVANALSYLHHD----CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 867 ------i~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+...+...++++++. ...+++|+|+++.||+++.++.+.|+||+.+..
T Consensus 160 ~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 160 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 001234445555432 134789999999999998776668999987763
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00047 Score=64.05 Aligned_cols=57 Identities=25% Similarity=0.324 Sum_probs=44.6
Q ss_pred ceeccCcccC-CcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccC
Q 043316 585 ELDLSHNFLQ-GEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 585 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
.++.+++.++ ..+|..+. .+|+.|+|++|+|+.+.++.|..+++|++|+|++|+|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 5777777775 35565443 368888899999988888888889999999999998875
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0018 Score=72.18 Aligned_cols=142 Identities=18% Similarity=0.266 Sum_probs=84.2
Q ss_pred cceeecCCCccEEEEEeC--------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 764 KYCIGKGRQGSVYKAELP--------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
.+.+..|....+|++... +++.+++|+.... ........+|..+++.+. +.-..++++++.+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~---- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE---- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----
Confidence 346778889999999764 3578999986332 123556668988887774 3334677776654
Q ss_pred EEEEEeccCCCchhh-c----------------ccCC-c-cccCC--HHHHHHHHHHHHH-------------------H
Q 043316 835 FIVSEYLDRGSLTTI-L----------------KDDA-A-AKEFG--WNQRMNVIKGVAN-------------------A 874 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~-l----------------~~~~-~-~~~l~--~~~~~~i~~~i~~-------------------~ 874 (1031)
.+|+||++|.++..- + +... . ..... +.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 299999998665321 1 0110 0 11122 3455555544322 1
Q ss_pred HHHh----hhC-CCCCeeeCCCCCCCeeeCCC----CceEEeccccccc
Q 043316 875 LSYL----HHD-CLPPIVHGDISSKNVLLDSE----HEAHVSDFGIAKF 914 (1031)
Q Consensus 875 L~~L----H~~-~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~ 914 (1031)
+++| ... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2232 221 22357899999999999876 7899999998864
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0018 Score=71.27 Aligned_cols=32 Identities=34% Similarity=0.337 Sum_probs=27.9
Q ss_pred CCeeeCCCCCCCeeeCCC----CceEEecccccccc
Q 043316 884 PPIVHGDISSKNVLLDSE----HEAHVSDFGIAKFL 915 (1031)
Q Consensus 884 ~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~ 915 (1031)
..++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 478999999999999875 67999999998754
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0023 Score=72.91 Aligned_cols=73 Identities=15% Similarity=0.156 Sum_probs=49.3
Q ss_pred cceeecCCCccEEEEEeCC--------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 764 KYCIGKGRQGSVYKAELPS--------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
.+.|+.|....||++...+ ++.+++|+..... ..+.+.+|..+++.+. +.-..++++.+.+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~------~~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE------TESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC------CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC------cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 3568889999999997653 5789999874311 1134457888877774 3234667776543
Q ss_pred EEEEEeccCCCc
Q 043316 835 FIVSEYLDRGSL 846 (1031)
Q Consensus 835 ~lv~e~~~~gsL 846 (1031)
.+|+||++|.++
T Consensus 148 g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 GRLEEYIPSRPL 159 (429)
T ss_dssp EEEECCCCEEEC
T ss_pred CEEEEEeCCccc
Confidence 389999987554
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0025 Score=69.02 Aligned_cols=71 Identities=14% Similarity=0.074 Sum_probs=43.1
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEEEec-
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYL- 841 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~- 841 (1031)
.+.++.|....+|++ +.+++|+..... ... ....+|+.+++.+. +.-..++++++. +.-++|+||+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~--~~~---~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGT--EEY---INRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------C---CCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCc--cce---eCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecC
Confidence 677999999999999 568888875431 111 11235666666553 211245555443 3346899999
Q ss_pred cCCCc
Q 043316 842 DRGSL 846 (1031)
Q Consensus 842 ~~gsL 846 (1031)
++.++
T Consensus 91 ~g~~l 95 (301)
T 3dxq_A 91 GAQTM 95 (301)
T ss_dssp TCEEC
T ss_pred CCccC
Confidence 66555
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0027 Score=58.92 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=38.6
Q ss_pred eeecCcCcCC-CCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccC
Q 043316 537 YLDLSANKLS-SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 537 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
.++.+++.|+ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6677777775 24554443 45777777777777766777777777777777777665
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.006 Score=68.08 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=43.0
Q ss_pred cceeecCCCccEEEEEeCC---------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCe
Q 043316 764 KYCIGKGRQGSVYKAELPS---------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~ 833 (1031)
.+.++.|....+|++...+ ++.+++|+..... ... ....+|..+++.+. +.-+.++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~~---~~~~~E~~~l~~L~~~g~~P~~~~~~--~-- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DEL---YNTISEFEVYKTMSKYKIAPQLLNTF--N-- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GGT---SCHHHHHHHHHHHHHTTSSCCEEEEE--T--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cce---ecHHHHHHHHHHHHhcCCCCceEEec--C--
Confidence 3467888889999997644 2688898875432 111 12346777766664 22244666554 2
Q ss_pred eEEEEEeccCCCc
Q 043316 834 SFIVSEYLDRGSL 846 (1031)
Q Consensus 834 ~~lv~e~~~~gsL 846 (1031)
-++||||++|..+
T Consensus 109 ~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 GGRIEEWLYGDPL 121 (369)
T ss_dssp TEEEEECCCSEEC
T ss_pred CcEEEEEecCCcC
Confidence 2689999988654
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.012 Score=67.37 Aligned_cols=74 Identities=18% Similarity=0.161 Sum_probs=47.2
Q ss_pred cceeecCCCccEEEEEeCC-CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc-eeeeeeeEecCCeeEEEEEec
Q 043316 764 KYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN-IIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~ 841 (1031)
.+.|+.|....+|++...+ ++.+++|+..... ....+ -.+|..+++.+...+ ..++++++. + ..|+||+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~id---R~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I 183 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIIN---REREKKISCILYNKNIAKKIYVFFT-N---GRIEEFM 183 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSC---HHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcC---HHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEee
Confidence 3568889999999998755 5788899874421 11111 247888887775333 457777763 2 2599999
Q ss_pred cCCCc
Q 043316 842 DRGSL 846 (1031)
Q Consensus 842 ~~gsL 846 (1031)
+|.++
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 98655
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.018 Score=63.23 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=28.2
Q ss_pred CCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 884 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
..++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 46899999999999998888999999887653
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=95.42 E-value=0.063 Score=53.48 Aligned_cols=100 Identities=15% Similarity=0.084 Sum_probs=65.0
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCce
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 923 (1031)
-+|.+.|+... .+++++++|.++.|.+.+|.-.-... .-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc----------
Confidence 37888887653 47999999999999999987762210 111333457899999999988874 1111
Q ss_pred eeccccCccccccccccCCCccccchhhhHHHHHHHhC
Q 043316 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG 961 (1031)
Q Consensus 924 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG 961 (1031)
.....+.|||... ...+.+.=|||+|+++|.-+--
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence 1123466888753 2456778899999999998863
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.041 Score=62.00 Aligned_cols=74 Identities=8% Similarity=0.022 Sum_probs=47.6
Q ss_pred cceeecCCCccEEEEEeCC--------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 764 KYCIGKGRQGSVYKAELPS--------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
.+.+..|....+|++...+ ++.|++|+..... +. ..+..+|..+++.+. +.-..++++.+. -
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~---~idR~~E~~~l~~L~~~gi~P~l~~~~~----~ 145 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GK---FYDSKVELDVFRYLSNINIAPNIIADFP----E 145 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---C---CCCHHHHHHHHHHHHHTTSSCCEEEEET----T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--ch---hcCHHHHHHHHHHHHhcCCCCCEEEEcC----C
Confidence 3567788899999997653 6889999864421 11 112246777776664 333456665432 2
Q ss_pred EEEEEeccCCCc
Q 043316 835 FIVSEYLDRGSL 846 (1031)
Q Consensus 835 ~lv~e~~~~gsL 846 (1031)
+.|+||++|..+
T Consensus 146 ~~I~efI~G~~l 157 (424)
T 3mes_A 146 GRIEEFIDGEPL 157 (424)
T ss_dssp EEEEECCCSEEC
T ss_pred CEEEEEeCCccC
Confidence 789999998764
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.95 E-value=0.05 Score=38.69 Aligned_cols=29 Identities=21% Similarity=0.304 Sum_probs=15.6
Q ss_pred EEeehhHHHHHHHHHHHHHHHhhhccccc
Q 043316 687 VVIVFPILGMVVLLIGLFGFFLFFGQRKR 715 (1031)
Q Consensus 687 ~~ii~~i~g~~vll~~~~~~~~~~~~r~~ 715 (1031)
.++.+++.|+++++++++++++|+++|++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34555555566665555555555555444
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.27 E-value=0.046 Score=38.72 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=15.7
Q ss_pred EeehhHHHHHHHHHHHHHHHhhhccccch
Q 043316 688 VIVFPILGMVVLLIGLFGFFLFFGQRKRD 716 (1031)
Q Consensus 688 ~ii~~i~g~~vll~~~~~~~~~~~~r~~~ 716 (1031)
++.+++.|+++++++++.+++|+++|+++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 45555555666655555555555554443
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=88.62 E-value=0.14 Score=57.46 Aligned_cols=29 Identities=24% Similarity=0.501 Sum_probs=24.9
Q ss_pred eeeCCCCCCCeee------CCCCceEEeccccccc
Q 043316 886 IVHGDISSKNVLL------DSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 886 ivH~Dlkp~NIll------~~~~~~kl~Dfg~a~~ 914 (1031)
++|+|+.+.||++ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998864
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=87.66 E-value=0.24 Score=35.07 Aligned_cols=27 Identities=15% Similarity=0.403 Sum_probs=13.1
Q ss_pred eehhHHHHHHHHHHHHHHHhhhccccc
Q 043316 689 IVFPILGMVVLLIGLFGFFLFFGQRKR 715 (1031)
Q Consensus 689 ii~~i~g~~vll~~~~~~~~~~~~r~~ 715 (1031)
|++.++|+++++++.+++++|.++|+.
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 455555544444444444445544443
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=84.38 E-value=2.3 Score=42.28 Aligned_cols=115 Identities=10% Similarity=0.118 Sum_probs=79.2
Q ss_pred CCCceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 817 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
.||+.+.. .+-.+++.+.+.++.-+ +...|-. ....+...+++++.+|+...++++.. +|--++|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 68888866 56666676666665443 2333322 22367789999999999998777765 8889999999
Q ss_pred eeCCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccch-hhhHHHHHHHhCCCCCC
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVH-SFGVLALEVIKGNHPRD 966 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw-slG~il~elltG~~P~~ 966 (1031)
+++.++.+++.=.|.-..+.|.. +.+ -|.| .+=|++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l~P~~------------~~e-----------e~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVDPLP------------VSE-----------AEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTBSCCC------------CCH-----------HHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCCCCCC------------CCH-----------HHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999998777644332110 011 1222 56778999999988865
|
| >4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid} | Back alignment and structure |
|---|
Probab=82.36 E-value=3.7 Score=40.94 Aligned_cols=114 Identities=10% Similarity=0.068 Sum_probs=77.3
Q ss_pred CCCceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHH-HhhhCCCCCeeeCCCCCCC
Q 043316 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS-YLHHDCLPPIVHGDISSKN 895 (1031)
Q Consensus 817 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlkp~N 895 (1031)
.||+. -..+-.+++.+.+.++.-+++.=...+ ...+..++++.+.+|+.... +++.. +|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57777 444557777777777755333222222 23677899999999999888 77655 788999999
Q ss_pred eeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccch-hhhHHHHHHHhCCCCCC
Q 043316 896 VLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVH-SFGVLALEVIKGNHPRD 966 (1031)
Q Consensus 896 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw-slG~il~elltG~~P~~ 966 (1031)
|++|.++.+++.-.|.-..+ +|..+ ...|.| .+=|++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e~------~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDEW------DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCSC------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCCC------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999877754433 22211 112222 56678888888887754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1031 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-53 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-52 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 8e-52 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-50 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-50 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 9e-50 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-49 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-48 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-48 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-48 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-47 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 3e-47 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 5e-47 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 5e-47 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 6e-47 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-46 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-46 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-45 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 4e-45 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 7e-45 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 8e-45 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 8e-45 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-44 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-44 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-44 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 6e-44 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 7e-44 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-43 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-42 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-42 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-41 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-41 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-41 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-41 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-40 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-39 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 6e-38 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 9e-38 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-37 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-37 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-36 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 5e-36 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 6e-36 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 9e-36 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-35 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-35 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-35 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-34 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-34 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-33 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-33 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-33 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-32 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 7e-32 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-30 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-30 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 6e-30 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-29 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-28 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-26 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 9e-26 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 9e-24 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-23 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-20 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-19 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-06 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-25 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-25 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-18 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 7e-18 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-23 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-23 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-22 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-22 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-22 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 7e-22 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-20 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-16 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-21 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-20 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-18 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-18 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 7e-17 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 7e-16 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 8e-15 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-07 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-19 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 2e-18 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-11 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-10 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-05 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 5e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 4e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 4e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 5e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-07 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-10 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 4e-09 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-08 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 7e-07 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 8e-07 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.004 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-10 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-09 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-06 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 5e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 5e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-09 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 2e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 7e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.002 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.002 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.004 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 1e-08 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 1e-07 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 4e-07 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 8e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.001 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.003 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.003 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.004 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 8e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-04 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 6e-08 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 7e-07 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 5e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 2e-04 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.002 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.004 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 6e-08 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 1e-07 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 3e-06 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 2e-05 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 1e-04 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 4e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 1e-07 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 3e-05 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 4e-05 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 3e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.001 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.001 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 5e-06 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 5e-06 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 4e-05 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 4e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.002 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.003 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.004 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 6e-06 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 2e-04 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 1e-05 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 4e-05 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 2e-04 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 0.004 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 5e-04 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 185 bits (472), Expect = 2e-53
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 25/275 (9%)
Query: 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
G++ IG G G+VYK + AVK N + F NEV L + RH N
Sbjct: 12 VGQR--IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVN 65
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
I+ F G+ + IV+++ + SL L +F + +++ + A + YLH
Sbjct: 66 ILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAH 938
I+H D+ S N+ L + + DFG+A + S + + +G+ + APE+
Sbjct: 123 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 939 MMRA---TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ-NLDHRLPTPS 994
M + + DV++FG++ E++ G P +S+ +N I + P S
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLS 232
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ + ++ + CL + + RP ++ +
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (464), Expect = 2e-52
Identities = 59/272 (21%), Positives = 114/272 (41%), Gaps = 21/272 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+ +G G+ G V+ AVK D FL E + +++H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-----QGSMSPDAFLAEANLMKQLQH 67
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
+ +++ + + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 68 QRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFI 125
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW-TAFAGTFGYAAPEIA 937
+H D+ + N+L+ ++DFG+A+ + + + APE
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 182
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
+ T K DV SFG+L E++ TN N+ +R+ P +
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------GYRMVRPD-NC 235
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++L +M LC E PE RPT + ++L
Sbjct: 236 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (459), Expect = 8e-52
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 19/273 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+D+ Y IG G G K G I K+ + + + A++ ++EV L E++
Sbjct: 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELK 61
Query: 818 HRNIIKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMNVIKGVANA 874
H NI++++ + ++ +IV EY + G L +++ ++ + V+ + A
Sbjct: 62 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121
Query: 875 LSYLH--HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
L H D ++H D+ NV LD + + DFG+A+ LN +S AF GT Y
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 181
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
+PE + M EK D+ S G L E+ P F++FS + + +
Sbjct: 182 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPP-------FTAFSQKEL-AGKIREGKFRR 233
Query: 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
D+L I+ L RP+++++
Sbjct: 234 IPYRYSDELNEIIT---RMLNLKDYHRPSVEEI 263
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (448), Expect = 2e-50
Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 21/272 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+ IG G+ G V+ + A+K + +++F+ E + ++ H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSH 59
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
+++ +G C +V E+++ G L+ L+ + + V ++YL
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA--AETLLGMCLDVCEGMAYL 117
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT-AFAGTFGYAAPEIA 937
++H D++++N L+ VSDFG+ +F+ + +A+PE+
Sbjct: 118 EE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 174
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R + K DV SFGVL EV +N ++ T RL P R
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYKP-RLA 227
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ IM C E PE RP ++ L
Sbjct: 228 STHVYQIMN---HCWKERPEDRPAFSRLLRQL 256
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (446), Expect = 4e-50
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 22/272 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
A++DF +GKG+ G+VY A S I A+K L + + EV +
Sbjct: 4 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-GVEHQLRREVEIQSH 62
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+RH NI++ +G+ +A +++ EY G++ L+ +F + I +ANAL
Sbjct: 63 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANAL 119
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
SY H ++H DI +N+LL S E ++DFG + SS T GT Y PE
Sbjct: 120 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRTTLCGTLDYLPPE 174
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ EK D+ S GVL E + G P + + + I+ + + +R
Sbjct: 175 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGAR 232
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
D++ + L +P RP +++V
Sbjct: 233 DLISR----------LLKHNPSQRPMLREVLE 254
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (443), Expect = 9e-50
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 23/273 (8%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D +G G+ G V + A+K + +DEF+ E + + H
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSH 58
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
+++ +G C+ + FI++EY+ G L L++ F Q + + K V A+ YL
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYL 116
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH-SSNWTAFAGTFGYAAPEIA 937
+H D++++N L++ + VSDFG+++++ ++ ++ PE+
Sbjct: 117 ES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 173
Query: 938 HMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
+ + K D+ +FGVL E+ G P + F+N T + RL P
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMP-------YERFTNSETAEHIAQGLRLYRPH-L 225
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+K+ +IM C E + RPT K + + +
Sbjct: 226 ASEKVYTIMY---SCWHEKADERPTFKILLSNI 255
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (439), Expect = 5e-49
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 21/272 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+ + +G+G G V+ A+K + FL E + ++RH
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-----PGTMSPEAFLQEAQVMKKLRH 71
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
+++ + S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 72 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYV 129
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH-SSNWTAFAGTFGYAAPEIA 937
VH D+ + N+L+ V+DFG+A+ + + + + APE A
Sbjct: 130 ERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 186
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T K DV SFG+L E+ + N +R+P P +
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRV------PYPGMVNREVLDQVERGYRMPCPP-EC 239
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ L +M C + PE RPT + + L
Sbjct: 240 PESLHDLMC---QCWRKEPEERPTFEYLQAFL 268
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (437), Expect = 1e-48
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 35/289 (12%)
Query: 752 EEIIK------AIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM 800
EEI++ ++ D +KY IG+G G+VY A ++ +G A+++ N +
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQ 58
Query: 801 ADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG 860
++ +NE+L + E ++ NI+ + ++V EYL GSLT ++ +
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMD 114
Query: 861 WNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920
Q V + AL +LH + ++H DI S N+LL + ++DFG + P S
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM-- 978
+ GT + APE+ K D+ S G++A+E+I+G P + + + +
Sbjct: 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP-------YLNENPLRA 224
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ I N L P + + CL E R + K++
Sbjct: 225 LYLIATNGTPELQNPE-KLSAIFRDFLN---RCLDMDVEKRGSAKELLQ 269
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 172 bits (437), Expect = 1e-48
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 38/300 (12%)
Query: 749 FLYEEIIKAIDDFGEKY---------CIGKGRQGSVYKAELPS----GIIFAVKKFNSQL 795
F +E+ +A+ +F ++ IG G G V L I A+K S
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 796 LFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAA 855
+ + +FL+E + + H N+I G + + I++E+++ GSL + L+ +
Sbjct: 67 TEKQ---RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND- 122
Query: 856 AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915
+F Q + +++G+A + YL VH D++++N+L++S VSDFG+++FL
Sbjct: 123 -GQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFL 178
Query: 916 NPHSSNWT-----AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVS 969
+S+ T + APE + T DV S+G++ EV+ G P Y
Sbjct: 179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWD 236
Query: 970 TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
N I + D+RLP P D L +M C + RP ++ N L
Sbjct: 237 MTNQDVINAIEQ-----DYRLPPPM-DCPSALHQLML---DCWQKDRNHRPKFGQIVNTL 287
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (439), Expect = 1e-48
Identities = 68/302 (22%), Positives = 123/302 (40%), Gaps = 43/302 (14%)
Query: 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
I+ F+G + I E++D GSL +LK A V V L+Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTY 119
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
L I+H D+ N+L++S E + DFG++ L + +F GT Y +PE
Sbjct: 120 LREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERL 175
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHP------------------------------RDY 967
+ + D+ S G+ +E+ G +P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL--CLVESPEARPTMKKV 1025
+++ S I + LD+ + P + + S+ + CL+++P R +K++
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 1026 CN 1027
Sbjct: 296 MV 297
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (426), Expect = 2e-47
Identities = 64/273 (23%), Positives = 106/273 (38%), Gaps = 25/273 (9%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+ + IGKG G V + G AVK + A FL E +T++R
Sbjct: 6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLR 58
Query: 818 HRNIIKFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H N+++ G + +IV+EY+ +GSL L+ G + + V A+
Sbjct: 59 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAME 117
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YL VH D++++NVL+ ++ A VSDFG+ K SS + APE
Sbjct: 118 YLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEA 171
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
+ + K DV SFG+L E+ + +++ P
Sbjct: 172 LREKKFSTKSDVWSFGILLWEIYSFGRV------PYPRIPLKDVVPRVEKGYKMDAPD-G 224
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ +M+ C RP+ ++ L
Sbjct: 225 CPPAVYEVMK---NCWHLDAAMRPSFLQLREQL 254
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (427), Expect = 3e-47
Identities = 59/288 (20%), Positives = 124/288 (43%), Gaps = 31/288 (10%)
Query: 751 YEEIIKAID-----DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQD 804
YE + + ++ + + +G G G VYKA+ + ++ A K ++ + +
Sbjct: 1 YEHVTRDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETSVLAAAKVIDT----KSEEELE 54
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
+++ E+ L H NI+K + +I+ E+ G++ ++ + + +Q
Sbjct: 55 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQI 112
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA 924
V K +AL+YLH I+H D+ + N+L + + ++DFG++ +
Sbjct: 113 QVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 169
Query: 925 FAGTFGYAAPEIAHMMRA-----TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979
F GT + APE+ + K DV S G+ +E+ + P ++ ++
Sbjct: 170 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM-----RVL 224
Query: 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+I ++ L PSR ++ CL ++ +AR T ++
Sbjct: 225 LKIAKSEPPTLAQPSR-WSSNFKDFLK---KCLEKNVDARWTTSQLLQ 268
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 5e-47
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 27/270 (10%)
Query: 767 IGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G G G+V K AVK ++ ++ A +DE L E + ++ + I++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNE--ANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
G C + +V E + G L L+ + + + ++ V+ + YL
Sbjct: 73 MIGICEA-ESWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEE--- 125
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGYAAPEIAHMM 940
VH D++++NVLL ++H A +SDFG++K L + T + APE +
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 941 RATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ + K DV SFGVL E G P Y S + M+ + R+ P+
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSEVTAMLEK-----GERMGCPA-GCPR 237
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ +M LC E RP V L
Sbjct: 238 EMYDLMN---LCWTYDVENRPGFAAVELRL 264
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 5e-47
Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 27/270 (10%)
Query: 767 IGKGRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G G GSV + I A+K E AD +E + E + ++ + I++
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVR 73
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
G C + +V E G L L +E + ++ V+ + YL
Sbjct: 74 LIGVCQA-EALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEE--- 127
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW---TAFAGTFGYAAPEIAHMM 940
VH D++++NVLL + H A +SDFG++K L S + +A + APE +
Sbjct: 128 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 187
Query: 941 RATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ + + DV S+GV E + G P Y I + R+ P +
Sbjct: 188 KFSSRSDVWSYGVTMWEALSYGQKP--YKKMKGPEVMAFIEQ-----GKRMECPP-ECPP 239
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+L ++M C + E RP V +
Sbjct: 240 ELYALMS---DCWIYKWEDRPDFLTVEQRM 266
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 168 bits (426), Expect = 6e-47
Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 29/277 (10%)
Query: 759 DDFGEKY----CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
DD + + IG G G+VY A + + + A+KK + + + EV L
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN-EKWQDIIKEVRFL 69
Query: 814 TEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
++RH N I++ G +++V EY + + K + V G
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK---KPLQEVEIAAVTHGALQ 126
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L+YLH ++H D+ + N+LL + DFG A + P +S F GT + A
Sbjct: 127 GLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS----FVGTPYWMA 179
Query: 934 PEIAHMM---RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
PE+ M + K DV S G+ +E+ + P + + M + +
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPP-------LFNMNAMSALYHIAQNESP 232
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
S + + ++ CL + P+ RPT + +
Sbjct: 233 ALQSGHWSEYFRNFVD---SCLQKIPQDRPTSEVLLK 266
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 166 bits (422), Expect = 1e-46
Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 21/273 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D K+ +G G+ G VY+ + AVK ++ + +EFL E + EI+
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIK 71
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H N+++ G C+ +I++E++ G+L L + +E + + +++A+ Y
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEY 130
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-WTAFAGTFGYAAPEI 936
L +H D++++N L+ H V+DFG+++ + + + APE
Sbjct: 131 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 187
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
+ + K DV +FGVL E+ Y + S ++ + D+R+ P
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELLEK-----DYRMERPE-G 240
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+K+ +M C +P RP+ ++
Sbjct: 241 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF 270
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (419), Expect = 2e-46
Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 26/273 (9%)
Query: 761 FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
F + IG+G +VYK + + A + + L ++ F E L ++H
Sbjct: 13 FDIE--IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS--ERQRFKEEAEMLKGLQHP 68
Query: 820 NIIKFHGFC----SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
NI++F+ + +V+E + G+L T LK K + + + L
Sbjct: 69 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGL 125
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
+LH PPI+H D+ N+ + + D G+A + A GT + AP
Sbjct: 126 QFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA--KAVIGTPEFMAP 182
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ + E DV++FG+ LE+ +P +S N + P
Sbjct: 183 EMYE-EKYDESVDVYAFGMCMLEMATSEYP-------YSECQNAAQIYRRVTSGVKPASF 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
V + E+ C+ ++ + R ++K + N
Sbjct: 235 DKVAIP--EVKEIIEGCIRQNKDERYSIKDLLN 265
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (414), Expect = 2e-45
Identities = 59/294 (20%), Positives = 111/294 (37%), Gaps = 41/294 (13%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKGR G V++ + G AVK F+S+ E+ +RH NI+ F
Sbjct: 10 SIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFI 63
Query: 826 GFCSNAQHS----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+ + ++VS+Y + GSL L + + A+ L++LH +
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHME 119
Query: 882 CL-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW----TAFAGTFGYA 932
+ P I H D+ SKN+L+ ++D G+A + + GT Y
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 933 APEIAHMM------RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE----- 981
APE+ + ++ D+++ G++ E+ + + +++
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239
Query: 982 ------INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
Q L +P + L + ++ C + AR T ++ L
Sbjct: 240 EMRKVVCEQKLRPNIP-NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 162 bits (411), Expect = 4e-45
Identities = 57/300 (19%), Positives = 110/300 (36%), Gaps = 45/300 (15%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLA 812
++ IG+G G V++A P + AVK + D Q +F E
Sbjct: 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM---QADFQREAAL 69
Query: 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD-------------------- 852
+ E + NI+K G C+ + ++ EY+ G L L+
Sbjct: 70 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 129
Query: 853 -DAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911
+++ + + VA ++YL VH D++++N L+ ++DFG+
Sbjct: 130 SSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGL 186
Query: 912 AKFLNP--HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS 969
++ + + A + PE R T + DV ++GV+ E+ Y
Sbjct: 187 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 246
Query: 970 TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ + D + + +L ++M LC + P RP+ + +L
Sbjct: 247 AHEEVIYYV-------RDGNILACPENCPLELYNLMR---LCWSKLPADRPSFCSIHRIL 296
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (408), Expect = 7e-45
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 26/279 (9%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSG-----IIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
+ IG G G VYK L + + A+K + + + +FL E +
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ---RVDFLGEAGIM 63
Query: 814 TEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
+ H NII+ G S + I++EY++ G+L L++ EF Q + +++G+A
Sbjct: 64 GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAA 121
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFG 930
+ YL + VH D++++N+L++S VSDFG+++ L + +
Sbjct: 122 GMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 178
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
+ APE + T DV SFG++ EV+ + +N ++ IN RL
Sbjct: 179 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAINDGF--RL 232
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
PTP D + +M C + RP + ++L
Sbjct: 233 PTPM-DCPSAIYQLMM---QCWQQERARRPKFADIVSIL 267
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (412), Expect = 8e-45
Identities = 57/299 (19%), Positives = 110/299 (36%), Gaps = 46/299 (15%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS------GIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
+FG+ +G G G V A I AVK + + ++++ ++E+ +
Sbjct: 40 EFGKV--LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK---ADSSEREALMSELKMM 94
Query: 814 TEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD-------------------- 852
T++ H NI+ G C+ + +++ EY G L L+
Sbjct: 95 TQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 154
Query: 853 DAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912
+ + + VA + +L VH D++++NVL+ + DFG+A
Sbjct: 155 EEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLA 211
Query: 913 KFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVST 970
+ + S+ + APE T K DV S+G+L E+
Sbjct: 212 RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 271
Query: 971 NFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++F +I ++ P +++ IM+ C RP+ + + L
Sbjct: 272 VDANFYKLIQN-----GFKMDQPF-YATEEIYIIMQ---SCWAFDSRKRPSFPNLTSFL 321
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (407), Expect = 8e-45
Identities = 62/275 (22%), Positives = 105/275 (38%), Gaps = 24/275 (8%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
++D+ +G+G G V A + AVK + + D + E+ +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD---CPENIKKEICINKML 60
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H N++KF+G ++ EY G L ++ D + +
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVV 117
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAP 934
YLH I H DI +N+LLD +SDFG+A ++ GT Y AP
Sbjct: 118 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 935 E-IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ-NLDHRLPT 992
E + E DV S G++ ++ G P D S + +S+ + N ++ +
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 234
Query: 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
++ K LVE+P AR T+ +
Sbjct: 235 APLALLHK----------ILVENPSARITIPDIKK 259
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (409), Expect = 1e-44
Identities = 60/293 (20%), Positives = 111/293 (37%), Gaps = 41/293 (13%)
Query: 761 FGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
FG+ +G G G V +A + + AVK + +++ ++E+ L+
Sbjct: 27 FGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLS 81
Query: 815 EI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD---------------DAAAKE 858
+ H NI+ G C+ + +++EY G L L+ +
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 859 FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918
++ VA +++L +H D++++N+LL + DFG+A+ +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 919 SSNW--TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS 976
S+ + APE T + DV S+G+ E+ S F
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258
Query: 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
MI E R+ +P ++ IM+ C P RPT K++ L+
Sbjct: 259 KMIKE-----GFRMLSPE-HAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 302
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (405), Expect = 3e-44
Identities = 62/289 (21%), Positives = 114/289 (39%), Gaps = 34/289 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELPSG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+D + IG+G G V KA + + A+K+ D D +F E+ L
Sbjct: 9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLC 65
Query: 815 EI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFG 860
++ H NII G C + + ++ EY G+L L+ ++ A
Sbjct: 66 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 125
Query: 861 WNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920
Q ++ VA + YL +H D++++N+L+ + A ++DFG+++ +
Sbjct: 126 SQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 182
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT 980
+ A E + T DV S+GVL E++ Y + +
Sbjct: 183 KTM-GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP-YCGMTCAELYEKLP 240
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ +RL P + D++ +M C E P RP+ ++ L
Sbjct: 241 Q-----GYRLEKPL-NCDDEVYDLMR---QCWREKPYERPSFAQILVSL 280
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (405), Expect = 4e-44
Identities = 63/281 (22%), Positives = 103/281 (36%), Gaps = 29/281 (10%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
I F E IG+G G VY L I AVK N ++ + +FL E + +
Sbjct: 28 IVHFNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN---RITDIGEVSQFLTEGIIM 82
Query: 814 TEIRHRNIIKFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ H N++ G C ++ S +V Y+ G L ++++ +
Sbjct: 83 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 142
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP----HSSNWTAFAGT 928
+ VH D++++N +LD + V+DFG+A+ + N T
Sbjct: 143 -----MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 197
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ A E + T K DV SFGVL E++ P N L
Sbjct: 198 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP-------PYPDVNTFDITVYLLQG 250
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
R D L +M C E RP+ ++ + +
Sbjct: 251 RRLLQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRI 288
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 161 bits (407), Expect = 6e-44
Identities = 56/274 (20%), Positives = 112/274 (40%), Gaps = 23/274 (8%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D + +G G G V++ E +G FA K ++ +D++ E+ ++ +
Sbjct: 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF----VMTPHESDKETVRKEIQTMSVL 80
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
RH ++ H + ++ E++ G L + D + ++ + ++ V L
Sbjct: 81 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLC 138
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
++H + VH D+ +N++ ++ + DFG+ L+P S GT +AAP
Sbjct: 139 HMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-TTGTAEFAAP 194
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP- 993
E+A D+ S GVL+ ++ G P + N + + N+D +
Sbjct: 195 EVAEGKPVGYYTDMWSVGVLSYILLSGLSP--FGGENDDETLRNVKSCDWNMDDSAFSGI 252
Query: 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
S D D + L+ P R T+ +
Sbjct: 253 SEDGKDFIRK-------LLLADPNTRMTIHQALE 279
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (401), Expect = 7e-44
Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 22/275 (8%)
Query: 756 KAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
K +DF +G+G +V A EL + +A+K + + E E ++
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-NKVPYVTRERDVMS 63
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ H +K + + + + Y G L ++ F + +A
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSA 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYA 932
L YLH I+H D+ +N+LL+ + ++DFG AK L+P S +F GT Y
Sbjct: 121 LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 177
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
+PE+ A + D+ + G + +++ G P + + N I ++ + +
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEKFFP 235
Query: 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+RD+++K LV R +++
Sbjct: 236 KARDLVEK----------LLVLDATKRLGCEEMEG 260
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (395), Expect = 3e-43
Identities = 63/278 (22%), Positives = 101/278 (36%), Gaps = 23/278 (8%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D +G G G V + E + + AVK +L D+F+ EV A+
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP-EAMDDFIREVNAMH 66
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ HRN+I+ +G +V+E GSL L+ F VA
Sbjct: 67 SLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEG 123
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW---TAFAGTFGY 931
+ YL +H D++++N+LL + + DFG+ + L + ++ F +
Sbjct: 124 MGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991
APE + D FGV E+ + E RLP
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE-----GERLP 235
Query: 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P D + ++M C PE RPT + + L
Sbjct: 236 RPE-DCPQDIYNVMV---QCWAHKPEDRPTFVALRDFL 269
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (391), Expect = 1e-42
Identities = 61/269 (22%), Positives = 106/269 (39%), Gaps = 24/269 (8%)
Query: 766 CIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
CIG+G+ G V++ S + A+K + + +++FL E L + + H +I
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHI 70
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
+K G + +I+ E G L + L+ + ++ AL+YL
Sbjct: 71 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLES- 126
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS-NWTAFAGTFGYAAPEIAHMM 940
VH DI+++NVL+ S + DFG+++++ + + + APE +
Sbjct: 127 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 941 RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000
R T DV FGV E++ N + RLP P +
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN------GERLPMPP-NCPPT 237
Query: 1001 LMSIMEVAILCLVESPEARPTMKKVCNLL 1029
L S+M C P RP ++ L
Sbjct: 238 LYSLMT---KCWAYDPSRRPRFTELKAQL 263
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 155 bits (393), Expect = 5e-42
Identities = 54/266 (20%), Positives = 102/266 (38%), Gaps = 25/266 (9%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G V++ E +G +F K N+ D+ NE+ + ++ H +I H
Sbjct: 37 LGSGAFGVVHRCVEKATGRVFVAKFINT----PYPLDKYTVKNEISIMNQLHHPKLINLH 92
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ ++ E+L G L + + + + +N ++ L ++H
Sbjct: 93 DAFEDKYEMVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHE---HS 147
Query: 886 IVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT 943
IVH DI +N++ +++ + V DFG+A LNP T +AAPEI
Sbjct: 148 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV-TTATAEFAAPEIVDREPVG 206
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTN--FSSFSNMITEINQNLDHRLPTPSRDVMDKL 1001
D+ + GVL ++ G P + E +++ + ++D +
Sbjct: 207 FYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN- 265
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCN 1027
L + P R T+
Sbjct: 266 ---------LLQKEPRKRLTVHDALE 282
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (388), Expect = 1e-41
Identities = 58/284 (20%), Positives = 109/284 (38%), Gaps = 27/284 (9%)
Query: 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELPS-----GIIFAVKKFNSQLLFDEMADQDEFL 807
I+K +F + +G G G+VYK I A+K+ E L
Sbjct: 4 RILKE-TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEIL 59
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
+E + + + ++ + G C + I + + G L +++ G +N
Sbjct: 60 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHK--DNIGSQYLLNW 116
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAF 925
+A ++YL +VH D++++NVL+ + ++DFG+AK L +
Sbjct: 117 CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985
+ A E T + DV S+GV E++ Y S S+++ +
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEISSILEK---- 228
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RLP P + IM C + ++RP +++
Sbjct: 229 -GERLPQPP-ICTIDVYMIMV---KCWMIDADSRPKFRELIIEF 267
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 152 bits (386), Expect = 1e-41
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 24/279 (8%)
Query: 756 KAIDDFGEKY----CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEV 810
K +D + Y +G G V AE + + A+K + L + NE+
Sbjct: 2 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG---KEGSMENEI 58
Query: 811 LALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG 870
L +I+H NI+ + H +++ + + G L + + + +I
Sbjct: 59 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQ 115
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
V +A+ YLH + + LD + + +SDFG++K +P S T GT G
Sbjct: 116 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGTPG 174
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP--RDYVSTNFSSFSNMITEINQNLDH 988
Y APE+ ++ D S GV+A ++ G P + + F E +
Sbjct: 175 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD 234
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ ++D + + + PE R T ++
Sbjct: 235 DISDSAKDFIRH----------LMEKDPEKRFTCEQALQ 263
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (387), Expect = 1e-41
Identities = 62/267 (23%), Positives = 105/267 (39%), Gaps = 19/267 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
I+DF +GKG G V+ AE + FA+K ++ + + + + +
Sbjct: 1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H + ++ F V EYL+ G L ++ +F ++ + L
Sbjct: 61 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQ 117
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
+LH IV+ D+ N+LLD + ++DFG+ K + F GT Y APEI
Sbjct: 118 FLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI 174
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
+ D SFGVL E++ G P + + + I N L ++D
Sbjct: 175 LLGQKYNHSVDWWSFGVLLYEMLIGQSP--FHGQDEEELFHSIRMDNPFYPRWLEKEAKD 232
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMK 1023
++ K V PE R ++
Sbjct: 233 LLVK----------LFVREPEKRLGVR 249
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (385), Expect = 2e-41
Identities = 53/286 (18%), Positives = 111/286 (38%), Gaps = 31/286 (10%)
Query: 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLA 812
+ +G+G G VY+ A+K N M ++ EFLNE
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA---ASMRERIEFLNEASV 76
Query: 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRM 865
+ E ++++ G S Q + ++ E + RG L + L+ ++ ++ +
Sbjct: 77 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 136
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS--NWT 923
+ +A+ ++YL+ VH D++++N ++ + + DFG+ + +
Sbjct: 137 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 193
Query: 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983
+ +PE T DV SFGV+ E+ + SN +
Sbjct: 194 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP------YQGLSNE-QVLR 246
Query: 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ L + D L +M +C +P+ RP+ ++ + +
Sbjct: 247 FVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSI 289
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (379), Expect = 2e-40
Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 26/275 (9%)
Query: 760 DFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+ EKY +G+G G V++ E S + K + DQ E+ L
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-----KGTDQVLVKKEISILN 56
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RHRNI+ H + + ++ E++ + + A E + ++ + V A
Sbjct: 57 IARHRNILHLHESFESMEELVMIFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEA 114
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV--SDFGIAKFLNPHSSNWTAFAGTFGYA 932
L +LH I H DI +N++ + + + +FG A+ L P + Y
Sbjct: 115 LQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL-LFTAPEYY 170
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
APE+ + D+ S G L ++ G +P +++ I D
Sbjct: 171 APEVHQHDVVSTATDMWSLGTLVYVLLSGINP--FLAETNQQIIENIMNAEYTFDEEAF- 227
Query: 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+++ + M ++ LV+ ++R T +
Sbjct: 228 --KEISIEAMDFVD---RLLVKERKSRMTASEALQ 257
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (366), Expect = 4e-39
Identities = 64/295 (21%), Positives = 113/295 (38%), Gaps = 40/295 (13%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPS--------GIIFAVKKFNSQLLFDEMADQDEFLNEV 810
D +G+G G V AE AVK S ++ + ++E+
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL---SDLISEM 69
Query: 811 LALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAA 856
+ I +H+NII G C+ +++ EY +G+L L+
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129
Query: 857 KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916
++ ++ VA + YL +H D++++NVL+ ++ ++DFG+A+ ++
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186
Query: 917 PHSSNWTAFA--GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS 974
+ APE T + DV SFGVL E+ Y
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS-PYPGVPVEE 245
Query: 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ E HR+ PS + ++L +M C P RPT K++ L
Sbjct: 246 LFKLLKE-----GHRMDKPS-NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDL 291
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 141 bits (356), Expect = 6e-38
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 29/274 (10%)
Query: 761 FGEKY----CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++Y +G G V+ A L AVK + L D + F E
Sbjct: 5 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP-SFYLRFRREAQNAAA 63
Query: 816 IRHRNIIKFHGFC----SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
+ H I+ + +IV EY+D +L I+ + + + VI
Sbjct: 64 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADA 120
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT---AFAGT 928
AL++ H I+H D+ N+++ + + V DFGIA+ + ++ T A GT
Sbjct: 121 CQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 177
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE A + DV+S G + EV+ G P F+ S + +
Sbjct: 178 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP-------FTGDSPV--SVAYQHVR 228
Query: 989 RLPTPSRDVMDKLMSIMEVAIL-CLVESPEARPT 1021
P P + L + ++ +L L ++PE R
Sbjct: 229 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQ 262
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 142 bits (358), Expect = 9e-38
Identities = 53/265 (20%), Positives = 99/265 (37%), Gaps = 23/265 (8%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+ DF +G G G V+ +G +A+K +++ + +E L L+ +
Sbjct: 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL-KQVEHTNDERLMLSIV 61
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H II+ G +AQ F++ +Y++ G L ++L+ +
Sbjct: 62 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV------CL 115
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
L + I++ D+ +N+LLD ++DFG AK++ GT Y APE+
Sbjct: 116 ALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP---DVTYTLCGTPDYIAPEV 172
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
+ D SFG+L E++ G P + +N I +D
Sbjct: 173 VSTKPYNKSIDWWSFGILIYEMLAGYTP--FYDSNTMKTYEKILNAELRFPPFFNEDVKD 230
Query: 997 VMDKLMSIMEVAILCLVESPEARPT 1021
++ + + R
Sbjct: 231 LLSR----------LITRDLSQRLG 245
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 139 bits (352), Expect = 2e-37
Identities = 63/284 (22%), Positives = 107/284 (37%), Gaps = 32/284 (11%)
Query: 761 FGEKY----CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDE-----FLNEV 810
F E Y +G+G V + P+ +AVK + A++ + L EV
Sbjct: 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 60
Query: 811 LALTEIR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
L ++ H NII+ F+V + + +G L L + + +++
Sbjct: 61 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMR 117
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
+ + LH IVH D+ +N+LLD + ++DFG + L+P GT
Sbjct: 118 ALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL-REVCGTP 173
Query: 930 GYAAPEIAHMMRA------TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983
Y APEI ++ D+ S GV+ ++ G+ P + MI N
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP--FWHRKQMLMLRMIMSGN 231
Query: 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
D + L+S LV P+ R T ++
Sbjct: 232 YQFGSPEWDDYSDTVKDLVS------RFLVVQPQKRYTAEEALA 269
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 139 bits (352), Expect = 3e-37
Identities = 51/280 (18%), Positives = 106/280 (37%), Gaps = 26/280 (9%)
Query: 759 DDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDE--MADQDEFLNEVL 811
++ + Y +G G+ V K E +G+ +A K + +++ EV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L E + +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF------LAEKESLTEEEATEFL 119
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA----HVSDFGIAKFLNPHSSNWTAFAG 927
L+ +++ I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFG 178
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987
T + APEI + + D+ S GV+ ++ G P ++ ++ +N +
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFE 236
Query: 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ + + + LV+ P+ R T++
Sbjct: 237 DEYFSNTSALAKDFIR------RLLVKDPKKRMTIQDSLQ 270
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 2e-36
Identities = 62/271 (22%), Positives = 109/271 (40%), Gaps = 29/271 (10%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEV-LALTEIRHRNIIKF 824
+G G G V + + FA+K D + EV L + +I++
Sbjct: 20 LGLGINGKVLQIFNKRTQEKFALKMLQ---------DCPKARREVELHWRASQCPHIVRI 70
Query: 825 HGFCSNA----QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
N + IV E LD G L + ++D + F + ++K + A+ YLH
Sbjct: 71 VDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS 129
Query: 881 DCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
I H D+ +N+L S+ ++DFG AK H+S T T Y APE+
Sbjct: 130 IN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVL 185
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR-D 996
+ + D+ S GV+ ++ G P + S + + S + + + P P +
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 243
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
V +++ ++ L P R T+ + N
Sbjct: 244 VSEEVKMLIR---NLLKTEPTQRMTITEFMN 271
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 138 bits (348), Expect = 5e-36
Identities = 51/270 (18%), Positives = 97/270 (35%), Gaps = 23/270 (8%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLA---L 813
++DF IG+G G VY +G ++A+K + + + + + LNE + +
Sbjct: 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLV 61
Query: 814 TEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
+ I+ + + ++ G L L F +
Sbjct: 62 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIIL 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L ++H+ +V+ D+ N+LLD +SD G+A + + + GT GY A
Sbjct: 119 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMA 173
Query: 934 PE-IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
PE + + D S G + ++++G+ P T EI++
Sbjct: 174 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT------KDKHEIDRMTLTMAVE 227
Query: 993 PSRDVMDKLMSIMEVAILCLVESPEARPTM 1022
+L S++E L R
Sbjct: 228 LPDSFSPELRSLLE---GLLQRDVNRRLGC 254
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (342), Expect = 6e-36
Identities = 57/294 (19%), Positives = 100/294 (34%), Gaps = 38/294 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKA------ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLA 812
D +G+G G V +A + + AVK E ++E+
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKI 69
Query: 813 LTEIRHR-NIIKFHGFC-SNAQHSFIVSEYLDRGSLTTILK-------------DDAAAK 857
L I H N++ G C ++ E+ G+L+T L+ +D
Sbjct: 70 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 129
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ VA + +L +H D++++N+LL ++ + DFG+A+ +
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 186
Query: 918 HSSNW--TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF 975
+ APE T + DV SFGVL E+ F
Sbjct: 187 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246
Query: 976 SNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ E R+ P + + + + C P RPT ++ L
Sbjct: 247 CRRLKE-----GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 291
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 135 bits (340), Expect = 9e-36
Identities = 64/287 (22%), Positives = 113/287 (39%), Gaps = 30/287 (10%)
Query: 763 EKY----CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
EKY IG+G G VYKA+ G FA+KK + + + + E+ L E++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGI--PSTTIREISILKELKH 59
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
NI+K + + +V E+LD+ + + + + + N ++Y
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYC 116
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IA 937
H ++H D+ +N+L++ E E ++DFG+A+ +T T Y AP+ +
Sbjct: 117 HD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVS-------------TNFSSFSNMITEINQ 984
+ + D+ S G + E++ G VS T S +TE+ +
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAI----LCLVESPEARPTMKKVCN 1027
+ L + E I L P R T K+
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (340), Expect = 1e-35
Identities = 52/292 (17%), Positives = 104/292 (35%), Gaps = 32/292 (10%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK + + + E+ L E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST--AIREISLLKEL 58
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H NI+K ++V E+L + + + + + L+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLA 116
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
+ H ++H D+ +N+L+++E ++DFG+A+ +T T Y APEI
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 937 AHMMR-ATEKYDVHSFGVLALEVIKGNHP--------------------RDYVSTNFSSF 975
+ + D+ S G + E++ + V +S
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 976 SNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
+ + + + S++ L P R + K
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLS---QMLHYDPNKRISAKAALA 282
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 134 bits (338), Expect = 2e-35
Identities = 39/284 (13%), Positives = 87/284 (30%), Gaps = 32/284 (11%)
Query: 762 GEKY----CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
G +Y IG G G +Y + +G A+K + + E +
Sbjct: 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK------TKHPQLHIESKIYKMM 59
Query: 817 RHRNIIKFHGFC-SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ I +C + ++ +V E L ++F + + + + +
Sbjct: 60 QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS---RKFSLKTVLLLADQMISRI 116
Query: 876 SYLHHDCLPPIVHGDISSKNVL---LDSEHEAHVSDFGIAKFLNPHSSN-------WTAF 925
Y+H +H D+ N L + ++ DFG+AK ++
Sbjct: 117 EYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 173
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985
GT YA+ + + + D+ S G + + G + +
Sbjct: 174 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG-SLPWQGLKAATKRQKYERISEKK 232
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ + + + + + C + +P + L
Sbjct: 233 MSTPIEVLCKGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLF 273
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (336), Expect = 3e-35
Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 32/268 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFD--EMADQDEFLNEVLALTEIR--HRNI 821
+G G GSVY + + A+K + D E+ + EV+ L ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
I+ + ++ E + + + V A+ + H+
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHN- 128
Query: 882 CLPPIVHGDISSKNVLLD-SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHM 939
++H DI +N+L+D + E + DFG L + +T F GT Y+ PE I +
Sbjct: 129 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWIRYH 184
Query: 940 MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
V S G+L +++ G+ P ++ I R+ + + ++
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEH--------DEEIIRGQVFFRQRVSSECQHLIR 236
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCN 1027
CL P RPT +++ N
Sbjct: 237 W----------CLALRPSDRPTFEEIQN 254
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (331), Expect = 2e-34
Identities = 55/280 (19%), Positives = 95/280 (33%), Gaps = 25/280 (8%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDE-FLNEVLALTEIRHRNIIKF 824
+G+G+ +VYKA + I A+KK + + L E+ L E+ H NII
Sbjct: 6 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 65
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ + +V ++++ I + + + L YLH
Sbjct: 66 LDAFGHKSNISLVFDFMETDLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQHW-- 120
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-T 943
I+H D+ N+LLD ++DFG+AK + +T T Y APE+ R
Sbjct: 121 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG 179
Query: 944 EKYDVHSFGVLALEVIKGNHP---RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000
D+ + G + E++ + F + T + P
Sbjct: 180 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239
Query: 1001 LMSIMEVAIL-------------CLVESPEARPTMKKVCN 1027
I I + +P AR T +
Sbjct: 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 4e-34
Identities = 54/268 (20%), Positives = 97/268 (36%), Gaps = 20/268 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
++DF +GKG G V +G +A+K +++ + + + E L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQNT 62
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
RH + V EY + G L L + + F + + +AL
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALE 119
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH +V+ DI +N++LD + ++DFG+ K + F GT Y APE+
Sbjct: 120 YLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
D GV+ E++ G P + + + +I L ++
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKK 1024
++ L + P+ R
Sbjct: 235 LLAG----------LLKKDPKQRLGGGP 252
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 129 bits (324), Expect = 2e-33
Identities = 44/289 (15%), Positives = 94/289 (32%), Gaps = 36/289 (12%)
Query: 762 GEKY----CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
G Y IG+G G +++ L + A+K + +D + +E +
Sbjct: 4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR------SDAPQLRDEYRTYKLL 57
Query: 817 RHRNII-KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
I + F H+ +V + L + ++F K + +
Sbjct: 58 AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG---RKFSVKTVAMAAKQMLARV 114
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAH-----VSDFGIAKFLNPHSSN-------WT 923
+H +V+ DI N L+ + + V DFG+ KF +
Sbjct: 115 QSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK 171
Query: 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983
+GT Y + + + D+ + G + + ++G+ P + +
Sbjct: 172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG-----LKAATNKQKYE 226
Query: 984 QNLDHRLPTPSRDVMDKL-MSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
+ + + TP R++ + + +A P + L K
Sbjct: 227 RIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 275
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (326), Expect = 3e-33
Identities = 62/294 (21%), Positives = 103/294 (35%), Gaps = 36/294 (12%)
Query: 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+ + IG G G VY+A+L SG + A+KK D+ E+ + ++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLD 71
Query: 818 HRNIIKFHGFC------SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
H NI++ F + + +V +Y+ A + + +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
+L+Y+H I H DI +N+LLD + + DFG AK L N + +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP----------RDYVSTNFSSFSNMIT 980
A I T DV S G + E++ G + + + I
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 981 EINQN-----LDHRLPTPSRDVMDKLMSIMEVAIL--CLVESPEARPTMKKVCN 1027
E+N N P V +A+ L +P AR T + C
Sbjct: 249 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 4e-33
Identities = 60/296 (20%), Positives = 108/296 (36%), Gaps = 34/296 (11%)
Query: 760 DFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILL 61
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + YL + L + + + +
Sbjct: 62 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRG 121
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 122 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 178
Query: 932 AAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHP--------------RDYVSTNFSSFS 976
APEI T+ D+ S G + E++ S + +
Sbjct: 179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238
Query: 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL-----CLVESPEARPTMKKVCN 1027
+I +N LP ++ ++L + L L +P R +++
Sbjct: 239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 3e-32
Identities = 50/289 (17%), Positives = 106/289 (36%), Gaps = 32/289 (11%)
Query: 763 EKY----CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+KY IG+G G+V+KA+ + I A+K+ D+ L E+ L E++
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLD--DDDEGVPSSALREICLLKELK 59
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H+NI++ H + + +V E+ D+ + G V + L
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN------GDLDPEIVKSFLFQLLKG 113
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
L ++H D+ +N+L++ E +++FG+A+ ++A T Y P++
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 938 HMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
+ + D+ S G + E+ P + + + + + P+ ++
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 997 VMDKLMSIMEVAIL------------------CLVESPEARPTMKKVCN 1027
K + L +P R + ++
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 7e-32
Identities = 56/275 (20%), Positives = 102/275 (37%), Gaps = 22/275 (8%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
I++F +G G G V+ +G ++A+K + + + E L
Sbjct: 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82
Query: 814 TEIRHR-NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
IR ++ H ++ +Y++ G L T L E +
Sbjct: 83 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV------G 136
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT-AFAGTFGY 931
+ L H I++ DI +N+LLDS ++DFG++K + F GT Y
Sbjct: 137 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 196
Query: 932 AAPEIAHMMRA--TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
AP+I + + D S GVL E++ G P N EI++ +
Sbjct: 197 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV-----DGEKNSQAEISRRILKS 251
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
P +++ +++ L++ P+ R
Sbjct: 252 EPPYPQEMSALAKDLIQ---RLLMKDPKKRLGCGP 283
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (303), Expect = 1e-30
Identities = 54/287 (18%), Positives = 103/287 (35%), Gaps = 35/287 (12%)
Query: 767 IGKGRQGSVYKAE--LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI---RHRNI 821
IG+G G V+KA G A+K+ Q + M + EV L + H N+
Sbjct: 15 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLS--TIREVAVLRHLETFEHPNV 72
Query: 822 IKFHGFCSNAQ-----HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++ C+ ++ +V E++D+ T + K +++ + L
Sbjct: 73 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLD 130
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
+LH +VH D+ +N+L+ S + ++DFG+A+ + + + T Y APE+
Sbjct: 131 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS-VVVTLWYRAPEV 186
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
D+ S G + E+ + S++ ++ I + P
Sbjct: 187 LLQSSYATPVDLWSVGCIFAEMFRRKPL-FRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 245
Query: 997 VMDKLMSIMEVAIL----------------CLVESPEARPTMKKVCN 1027
S I CL +P R + +
Sbjct: 246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 1e-30
Identities = 56/309 (18%), Positives = 112/309 (36%), Gaps = 42/309 (13%)
Query: 749 FLYEEIIKAIDDFGEKY----CIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K + Y +G G G+V A + +G A+KK + A +
Sbjct: 4 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFC------SNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
E+ L +RH N+I + ++V ++ + +
Sbjct: 64 --AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-----E 116
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ G ++ ++ + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 117 KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADS 173
Query: 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP------------- 964
+ + + A I + MR T+ D+ S G + E+I G
Sbjct: 174 EMTGYVVT--RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 231
Query: 965 -RDYVSTNFSSFSNMITEINQNLDHRLPT-PSRDVMDKLMSIMEVAI----LCLVESPEA 1018
+ + + ++ +N LP +D L + +A+ LV E
Sbjct: 232 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ 291
Query: 1019 RPTMKKVCN 1027
R T +
Sbjct: 292 RVTAGEALA 300
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 120 bits (301), Expect = 6e-30
Identities = 51/248 (20%), Positives = 91/248 (36%), Gaps = 13/248 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL-KQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH +++ D+ +N+L+D + V+DFG AK GT APEI
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR---VKGRTWTLCGTPEALAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
+ D + GVL E+ G P + + I + +D
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPIQIYEKIVSGKVRFPSHFSSDLKD 267
Query: 997 VMDKLMSI 1004
++ L+ +
Sbjct: 268 LLRNLLQV 275
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 4e-29
Identities = 51/304 (16%), Positives = 101/304 (33%), Gaps = 42/304 (13%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+ + + IG+G G V+KA +G A+KK + ++ L E+ L +
Sbjct: 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME--NEKEGFPITALREIKILQLL 66
Query: 817 RHRNIIKFHGFCSNAQ--------HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
+H N++ C ++V ++ + + +F ++ V+
Sbjct: 67 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVM 123
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS----NWTA 924
+ + N L Y+H I+H D+ + NVL+ + ++DFG+A+ + + +T
Sbjct: 124 QMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTN 180
Query: 925 FAGTFGYAAPE-IAHMMRATEKYDVHSFGVLALEVIKGNHP-----------------RD 966
T Y PE + D+ G + E+ +
Sbjct: 181 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 240
Query: 967 YVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL---CLVESPEARPTMK 1023
+ + N L +D + + L LV P R
Sbjct: 241 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 300
Query: 1024 KVCN 1027
N
Sbjct: 301 DALN 304
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (290), Expect = 1e-28
Identities = 59/309 (19%), Positives = 113/309 (36%), Gaps = 40/309 (12%)
Query: 748 KFLYEEIIKAIDDFGEKY----CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMAD 802
F +E+ K I + E+Y +G G GSV A +G+ AVKK + F +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIH 60
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQ-----HSFIVSEYLDRGSLTTILKDDAAAK 857
E+ L ++H N+I + A+ + + +L L I+K +
Sbjct: 61 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC----Q 116
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP------------- 964
A + A + + M + D+ S G + E++ G
Sbjct: 174 E--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 965 -RDYVSTNFSSFSNMITEINQNLDHRLP-TPSRDVMDKLMSIMEVAI----LCLVESPEA 1018
R + + +E +N L P + + + +A+ LV +
Sbjct: 232 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
Query: 1019 RPTMKKVCN 1027
R T +
Sbjct: 292 RITAAQALA 300
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 108 bits (270), Expect = 4e-26
Identities = 47/302 (15%), Positives = 101/302 (33%), Gaps = 49/302 (16%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
DD+ +G+G+ V++A + + VK + + E+ L +
Sbjct: 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENL 86
Query: 817 R-HRNIIKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
R NII + +V E+++ + + + +
Sbjct: 87 RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 140
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
AL Y H I+H D+ NV++D E + + D+G+A+F +P + + +
Sbjct: 141 ALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFK 196
Query: 933 APEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI------------ 979
PE+ + D+ S G + +I P + N+ +
Sbjct: 197 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 256
Query: 980 ----TEINQNLDHRLPTPSRDVMDKLMSIMEVAIL----------CLVESPEARPTMKKV 1025
E++ + L SR ++ + ++ L ++R T ++
Sbjct: 257 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
Query: 1026 CN 1027
Sbjct: 317 ME 318
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 108 bits (270), Expect = 9e-26
Identities = 77/397 (19%), Positives = 136/397 (34%), Gaps = 33/397 (8%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
L L + + ++ S +L + L + + + L +L +++ S
Sbjct: 20 ALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSN 75
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
NQL P NL+ L + + NN ++ P + L
Sbjct: 76 NQLTDITP--LKNLTKLVDILMNNNQIADITPLANLT---------NLTGLTLFNNQITD 124
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398
L ++I L L+ L+ + NLT L +++
Sbjct: 125 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISS 184
Query: 399 NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWR 458
N + LT+LE L N + G NL L L+ N L +
Sbjct: 185 NKVS--DISVLAKLTNLESLIATNNQISD--ITPLGILTNLDELSLNGNQLKDIGTL--A 238
Query: 459 NFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNL 518
+ L + + N I P + +KL L L +N I P+ + +L N
Sbjct: 239 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 296
Query: 519 NQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578
+ +L L YL L N +S P + +L+KL L +NN+ +
Sbjct: 297 LE----DISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKV--SDVSSLA 348
Query: 579 KLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHN 615
L +++ L HN + P + N+ + +L L+
Sbjct: 349 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 102 bits (254), Expect = 9e-24
Identities = 75/378 (19%), Positives = 133/378 (35%), Gaps = 31/378 (8%)
Query: 190 PPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGI 249
S +L + L + + SI + LN+L+ ++ S NQL P NL+ L
Sbjct: 37 TVSQTDLDQVTTLQADRLGI-KSIDG-VEYLNNLTQINFSNNQLTDITPLK--NLTKLVD 92
Query: 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSI 309
+ + N + P + + + NL++L + L +N++S
Sbjct: 93 ILMNNNQIADITPLANLTNLTGL----TLFNNQITDIDPLKNLTNLNRLELSSNTISDIS 148
Query: 310 PPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSK 369
+ G + + NL++L L + N + + L +L
Sbjct: 149 ALSGLTSLQQLSFGNQVTD-----LKPLANLTTLERLDISSNKVS--DISVLAKLTNLES 201
Query: 370 LELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV 429
L N +S + P I T L +++ N L + +LT+L L N +
Sbjct: 202 LIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISN-- 255
Query: 430 YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQV 489
LT L L N + N +N I + L
Sbjct: 256 LAPLSGLTKLTELKLGANQISNISPLAGLTALT----NLELNENQLEDISPISNLKNLTY 311
Query: 490 LDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSI 549
L L N+I P L L +L N++S +LT + +L N++S
Sbjct: 312 LTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLT 367
Query: 550 PKSMGNLSKLHYLNLSNN 567
P + NL+++ L L++
Sbjct: 368 P--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 101 bits (252), Expect = 2e-23
Identities = 64/383 (16%), Positives = 129/383 (33%), Gaps = 51/383 (13%)
Query: 290 SNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLY 349
+ L+ L +++ ++ +Q +L+ ++ L + + + L++L +
Sbjct: 19 TALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFS 74
Query: 350 DNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409
+N + P + L L + + N ++ + P + + + + +
Sbjct: 75 NNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 132
Query: 410 RN------LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWR----- 458
++ + + +L L +IS N
Sbjct: 133 NLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV 192
Query: 459 --NFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLIL 516
L + A+ N I P I + L L L+ N + L +L L L
Sbjct: 193 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 248
Query: 517 NLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP--------------------KSMGNL 556
NQ+S P LT+L L L AN++S+ P + NL
Sbjct: 249 ANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL 306
Query: 557 SKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNN 616
L YL L N + P L L L ++N + + N+ ++ L+ HN
Sbjct: 307 KNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQ 362
Query: 617 LFDLIPGCFEEMRSLSRIDIAYN 639
+ DL P + ++++ +
Sbjct: 363 ISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 93.1 bits (230), Expect = 1e-20
Identities = 87/386 (22%), Positives = 146/386 (37%), Gaps = 31/386 (8%)
Query: 86 LGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEI 145
LG S + + L + +I + L+ L ++ NNQL+ + P +
Sbjct: 29 LGKTNVTDTVSQTDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--L 84
Query: 146 GHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN 205
+LT L + + N + PL N+ L N L NL+NL L L+
Sbjct: 85 KNLTKLVDILMNNNQIADITPLANL----TNLTGLTLFNNQITDIDPLKNLTNLNRLELS 140
Query: 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI 265
+N++ + + LANL+ L L + N SV+
Sbjct: 141 SNTISDISALSGLTSLQ-----QLSFGNQVTDLKPLANLTTLERLDISSN--KVSDISVL 193
Query: 266 GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLY 325
L +L L + NQ+ P L++L +SL N L T +L L++L L
Sbjct: 194 AKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLA 249
Query: 326 INQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI 385
NQ+ + P + L+ L L L N + P + L +L+ LEL N I
Sbjct: 250 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ--LEDISPI 303
Query: 386 GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLS 445
NL L + + N++ + P +LT L+RL F N + + + N+ +L
Sbjct: 304 SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAG 359
Query: 446 QNNLYGEISFNWRNFPKLGTFNASMN 471
N + N ++ +
Sbjct: 360 HNQISDLTPL--ANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 89.3 bits (220), Expect = 2e-19
Identities = 58/270 (21%), Positives = 99/270 (36%), Gaps = 16/270 (5%)
Query: 34 NWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQ 93
N + + ++++ L + + + + ++ + N
Sbjct: 130 NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD 189
Query: 94 DFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRM 153
+ +L L + N + P I + L L L NQL + LT L
Sbjct: 190 ISVLAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTD 245
Query: 154 LYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSI 213
L N + PL L+ + L L N S P L L+ L L LN N
Sbjct: 246 LDLANNQISNLAPL--SGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN--QLED 299
Query: 214 PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFE 273
+ + NL +L+ L L N + P S +L+ L L+ N + S + NL ++
Sbjct: 300 ISPISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFANNKVSD--VSSLANLTNINW 355
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L NQ+ PL +NL+ +T + L +
Sbjct: 356 LSAGHNQISDLTPL--ANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 49.6 bits (117), Expect = 1e-06
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 7/158 (4%)
Query: 2 GLPILNILILFLLLTFSYNVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATK 61
+ L L L + N S+ S + L ++ + N
Sbjct: 233 DIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLEL 292
Query: 62 ISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQI 121
+ + + ++L ++ SS L L + N + +
Sbjct: 293 NENQLEDISPISNLKNLTYLTLYFNNISDIS---PVSSLTKLQRLFFANNKVSD--VSSL 347
Query: 122 SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVN 159
+NL+ + L G+NQ+S + P + +LT + L +
Sbjct: 348 ANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (268), Expect = 1e-25
Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 28/246 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG G QG V A + A+KK + A + E++ + + H+NII
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR--AYRELVLMKCVNHKNIISLL 82
Query: 826 GFCS------NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+ Q ++V E +D I E + ++ + + +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH 136
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM 939
I+H D+ N+++ S+ + DFG+A+ T + T Y APE+
Sbjct: 137 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG 192
Query: 940 MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
M E D+ S G + E+++ F + + + +L TP + M
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKIL-------FPGRDYI--DQWNKVIEQLGTPCPEFMK 243
Query: 1000 KLMSIM 1005
KL +
Sbjct: 244 KLQPTV 249
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 104 bits (259), Expect = 6e-25
Identities = 85/304 (27%), Positives = 130/304 (42%), Gaps = 15/304 (4%)
Query: 31 ALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCN---LVGRVISISLSSLG 87
ALL K L N + LSSW T TW G+ C+ RV ++ LS L
Sbjct: 10 ALLQIKKDLGN----PTTLSSWL----PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 61
Query: 88 LNGTFQ-DFSFSSFPHLMYLNLS-CNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEI 145
L + S ++ P+L +L + N L G IPP I+ L++L L + + +SG IP +
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 146 GHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN 205
+ L L F N L G++P I L + +T N SG IP S G+ S L
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI 265
+ + +L+ +DLS+N L + F +
Sbjct: 182 SRNRLTGKIPPTFANLNLAFVDLSRNM-LEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV 240
Query: 266 GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLY 325
G K+L LDL N+++G++P + L L +++ N+L G IP GNL+
Sbjct: 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYA 299
Query: 326 INQL 329
N+
Sbjct: 300 NNKC 303
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 86.0 bits (211), Expect = 1e-18
Identities = 60/276 (21%), Positives = 102/276 (36%), Gaps = 5/276 (1%)
Query: 330 DGVIPPSIGNLSSLRTLYLYDNGFYGL--VPNEIGYLKSLSKLELCRNH-LSGVIPHSIG 386
GV+ + + L L +P+ + L L+ L + + L G IP +I
Sbjct: 39 LGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIA 98
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
LT+L + + ++ G IP + +L L F+ N L G + + PNL +
Sbjct: 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158
Query: 447 NNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE 506
N + G I ++ +F KL T N P + L S +++
Sbjct: 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF-VDLSRNMLEGDASVLF 217
Query: 507 KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566
+ I + G L LDL N++ ++P+ + L LH LN+S
Sbjct: 218 GSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277
Query: 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQIC 602
N +IP + L ++N P C
Sbjct: 278 NNLCGEIP-QGGNLQRFDVSAYANNKCLCGSPLPAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 83.6 bits (205), Expect = 7e-18
Identities = 68/304 (22%), Positives = 110/304 (36%), Gaps = 29/304 (9%)
Query: 373 CRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL--IPKSFRNLTSLERLRFNQN-NLFGKV 429
C GV+ + ++ +++ +L IP S NL L L NL G +
Sbjct: 34 CNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPI 93
Query: 430 YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQV 489
A L +L ++ N+ G I L T + S N + G++PP I L
Sbjct: 94 PPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153
Query: 490 LDLSSNHIVGKIPVQFEKLFSLNKLILNL-NQLSGGVPLEFGSLTELQYLDLSANKLSSS 548
+ N I G IP + L + N+L+G +P F +L +
Sbjct: 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDA 213
Query: 549 IPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLE 608
+ + N+ K ++ DL +N + G +P + ++ L
Sbjct: 214 SVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGL--DLRNNRIYGTLPQGLTQLKFLH 271
Query: 609 ELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLMEGNKGLCGNFKA 668
LN+S NNL IP + +L R D++ NK LCG
Sbjct: 272 SLNVSFNNLCGEIP----QGGNLQRFDVSA-----------------YANNKCLCG--SP 308
Query: 669 LPSC 672
LP+C
Sbjct: 309 LPAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 63.2 bits (152), Expect = 4e-11
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 173 SLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQ 232
+N L L +N G +P L L L L ++ N+L G IP GNL + + N+
Sbjct: 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNK 302
Query: 233 LRGSIP 238
P
Sbjct: 303 CLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 52.4 bits (124), Expect = 1e-07
Identities = 36/160 (22%), Positives = 56/160 (35%), Gaps = 3/160 (1%)
Query: 530 GSLTELQYLDLSANKLSS--SIPKSMGNLSKLHYLNLSNN-QFNHKIPTEFEKLIHLSEL 586
+ LDLS L IP S+ NL L++L + IP KL L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 587 DLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646
++H + G IP + +++L L+ S+N L +P + +L I N + G IP
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 647 NSTAFKDGLMEGNKGLCGNFKALPSCDAFMSHEQTSRKKW 686
+S L +
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSR 206
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 100 bits (249), Expect = 1e-23
Identities = 58/285 (20%), Positives = 107/285 (37%), Gaps = 16/285 (5%)
Query: 373 CRNHLSGVIPHSIG-NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE 431
C + +P + + L L N N + + F+NL +L L N +
Sbjct: 17 CSDLGLEKVPKDLPPDTALLDLQN---NKITEIKDGDFKNLKNLHTLILINNKISKISPG 73
Query: 432 AFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLD 491
AF L L LS+N L + +L + + S+ + ++ L
Sbjct: 74 AFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE-LG 132
Query: 492 LSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPK 551
+ G F+ + L+ + + ++ + G L L L NK++
Sbjct: 133 TNPLKSSGIENGAFQGMKKLSYIRIADTNIT---TIPQGLPPSLTELHLDGNKITKVDAA 189
Query: 552 SMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELN 611
S+ L+ L L LS N + HL EL L++N L ++P + + + ++ +
Sbjct: 190 SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 248
Query: 612 LSHNNLFDLIPGCF------EEMRSLSRIDIAYNELQ-GPIPNST 649
L +NN+ + F + S S + + N +Q I ST
Sbjct: 249 LHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPST 293
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 99.7 bits (247), Expect = 2e-23
Identities = 65/276 (23%), Positives = 106/276 (38%), Gaps = 18/276 (6%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P + L L +N + + LK+L L L N +S + P + L KL
Sbjct: 25 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 82
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY-- 450
+ + +N L L K + L L R ++N + F + ++L N L
Sbjct: 83 RLYLSKNQLKELPEKMPKTLQEL---RVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS 139
Query: 451 GEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFS 510
G + ++ KL + NI +IP + L L L N I + L +
Sbjct: 140 GIENGAFQGMKKLSYIRIADTNI-TTIPQGL--PPSLTELHLDGNKITKVDAASLKGLNN 196
Query: 511 LNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L KL L+ N +S + L+ L L+ NKL +P + + + + L NN +
Sbjct: 197 LAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNIS 255
Query: 571 HKIPTEF------EKLIHLSELDLSHNFLQ-GEIPP 599
+F K S + L N +Q EI P
Sbjct: 256 AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQP 291
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 97.4 bits (241), Expect = 1e-22
Identities = 57/275 (20%), Positives = 103/275 (37%), Gaps = 13/275 (4%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
C + ++P L + A L L NN + NL +L L L N++ P +
Sbjct: 17 CSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA 74
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSL 300
A L L LYL KN L + L+ L + ++ S+ + + + L +
Sbjct: 75 FAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGT- 133
Query: 301 FNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360
SG ++ LS + + + + G SL L+L N +
Sbjct: 134 NPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ---GLPPSLTELHLDGNKITKVDAAS 190
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
+ L +L+KL L N +S V S+ N L +++ N L +P + ++ +
Sbjct: 191 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYL 249
Query: 421 NQNNLFGKVYEAF------GDHPNLTFLDLSQNNL 449
+ NN+ F + + + L N +
Sbjct: 250 HNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 97.0 bits (240), Expect = 2e-22
Identities = 55/300 (18%), Positives = 103/300 (34%), Gaps = 16/300 (5%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332
+ S+ L +P L+ L NN ++ NL+ L L L N++ +
Sbjct: 14 VVQCSDLGL-EKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 70
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
P + L L LYL N L L+ L E + + + + + +
Sbjct: 71 SPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE 130
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
L G+ +F+ + L +R N+ P+LT L L N +
Sbjct: 131 LGTNP-LKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKV 186
Query: 453 ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLN 512
+ + + L S N+I + ++ L+ L L++N +V K+P +
Sbjct: 187 DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQ 245
Query: 513 KLILNLNQLSG------GVPLEFGSLTELQYLDLSANKLSSS--IPKSMGNLSKLHYLNL 564
+ L+ N +S P + L +N + P + + + L
Sbjct: 246 VVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 95.9 bits (237), Expect = 5e-22
Identities = 55/268 (20%), Positives = 103/268 (38%), Gaps = 13/268 (4%)
Query: 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL 223
+P ++ +L L +N + NL NL L L NN + P L L
Sbjct: 24 KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 224 SILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFG 283
L LS+NQL+ L L + + + + + N + EL + + G
Sbjct: 82 ERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGL-NQMIVVELGTNPLKSSG 140
Query: 284 SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSL 343
+F + L+ + + + +++ +IP G +L+EL L N++ V S+ L++L
Sbjct: 141 IENGAFQGMKKLSYIRIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNL 197
Query: 344 RTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403
L L N + + L +L L N L +P + + + +V + N++
Sbjct: 198 AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 256
Query: 404 LIPKSF------RNLTSLERLRFNQNNL 425
+ F S + N +
Sbjct: 257 IGSNDFCPPGYNTKKASYSGVSLFSNPV 284
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 95.5 bits (236), Expect = 7e-22
Identities = 56/280 (20%), Positives = 100/280 (35%), Gaps = 13/280 (4%)
Query: 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNH 160
P L+L N + NL L L L NN++S + P L L LY N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 161 LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220
L L + V + L + + L N G +
Sbjct: 91 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVV-ELGTNPLKSSGIENGAFQGM 149
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
LS + ++ + +IP L +L L+L N + + + L +L +L LS N
Sbjct: 150 KKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV------IP 334
+ S +N L + L NN L +P + + + + L+ N + + P
Sbjct: 207 ISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPP 265
Query: 335 PSIGNLSSLRTLYLYDN--GFYGLVPNEIGYLKSLSKLEL 372
+S + L+ N ++ + P+ + + ++L
Sbjct: 266 GYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 91.3 bits (225), Expect = 2e-20
Identities = 54/305 (17%), Positives = 104/305 (34%), Gaps = 27/305 (8%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
+P + LDL NN+++ + + +L L L N + P L +
Sbjct: 25 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 82
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS 236
L L N L L + S+ N + + + L + + G
Sbjct: 83 RLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE-LGTNPLKSSGI 141
Query: 237 IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLT 296
+ + L + + ++ G SL EL L N++ S L++L
Sbjct: 142 ENGAFQGMKKLSYIRIADTNITTIPQ---GLPPSLTELHLDGNKITKVDAASLKGLNNLA 198
Query: 297 LMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGL 356
+ L NS+S + N L EL L N+L +P + + ++ +YL++N +
Sbjct: 199 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 257
Query: 357 VPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL--FGLIPKSFRNLTS 414
N+ P V++ N + + + P +FR +
Sbjct: 258 GSNDF------------------CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYV 299
Query: 415 LERLR 419
++
Sbjct: 300 RAAVQ 304
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 78.2 bits (191), Expect = 3e-16
Identities = 41/203 (20%), Positives = 74/203 (36%), Gaps = 6/203 (2%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
+P ++ +LDL +N I F+ L +L+ LIL N++S P F L +L
Sbjct: 24 KVPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 536 QYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQG 595
+ L LS N+L K L +L + + ++I + EL + G
Sbjct: 82 ERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVV-ELGTNPLKSSG 140
Query: 596 EIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGL 655
M+ L + ++ N+ + G SL+ + + N++ S + L
Sbjct: 141 IENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNL 197
Query: 656 MEGNKGLCGNFKALPSCDAFMSH 678
+ A H
Sbjct: 198 AKLGLSFNSISAVDNGSLANTPH 220
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.0 bits (229), Expect = 3e-21
Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 8/280 (2%)
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
Q L+ ++P + + ++L+ N + + ++L L L N
Sbjct: 11 EPKVTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV 67
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGLYINQLDGVIPPSIGN 339
L +F+ L+ L + L +N+ S+ P L L L L L + P
Sbjct: 68 LARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRG 127
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN 399
L++L+ LYL DN L + L +L+ L L N +S V + L L + + +N
Sbjct: 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 187
Query: 400 HLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRN 459
+ + P +FR+L L L NNL EA L +L L+ N +
Sbjct: 188 RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARP-L 246
Query: 460 FPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499
+ L F S + + S+P + + L++N + G
Sbjct: 247 WAWLQKFRGSSSEVPCSLPQRLAG---RDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.6 bits (223), Expect = 2e-20
Identities = 61/262 (23%), Positives = 97/262 (37%), Gaps = 7/262 (2%)
Query: 357 VPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416
VP I + ++ L N +S V S L ++ + N L + +F L LE
Sbjct: 26 VPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 417 RLRFNQNNLFGKVYE-AFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYG 475
+L + N V F L L L + L +R L N +
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
D L L L N I F L SL++L+L+ N+++ P F L L
Sbjct: 144 LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203
Query: 536 QYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQG 595
L L AN LS+ +++ L L YL L++N + L + S + +
Sbjct: 204 MTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPC 262
Query: 596 EIPPQICNMESLEELNLSHNNL 617
+P + + L+ N+L
Sbjct: 263 SLPQ---RLAGRDLKRLAANDL 281
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.9 bits (208), Expect = 2e-18
Identities = 60/287 (20%), Positives = 95/287 (33%), Gaps = 29/287 (10%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
+P I + + L N++S V L +L+ N L L+L+
Sbjct: 26 VPVGIPAA--SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS 236
L L N + P L L L L + L+
Sbjct: 84 QLDLSDNAQLRSVDP-----------------------ATFHGLGRLHTLHLDRCGLQEL 120
Query: 237 IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLT 296
P L+ L LYL N+L +L +L L L N++ +F L SL
Sbjct: 121 GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD 180
Query: 297 LMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGL 356
+ L N ++ P +L L L L+ N L + ++ L +L+ L L DN +
Sbjct: 181 RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240
Query: 357 VPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403
L K + + +P + L + N L G
Sbjct: 241 -CRARPLWAWLQKFRGSSSEVPCSLPQRLAGRD---LKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.1 bits (206), Expect = 3e-18
Identities = 57/264 (21%), Positives = 93/264 (35%), Gaps = 7/264 (2%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P I ++ + ++L+ N + ++L+ L L N L+ + + L L
Sbjct: 26 VPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 393 LVNMCENHLFGLI-PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451
+++ +N + P +F L L L ++ L F L +L L N L
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
Query: 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL 511
+R+ L N I L L L N + P F L L
Sbjct: 144 LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH 571
L L N LS L LQYL L+ N + + L S+++
Sbjct: 204 MTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPC 262
Query: 572 KIPTEFEKLIHLSELDLSHNFLQG 595
+P ++L L+ N LQG
Sbjct: 263 SLP---QRLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.2 bits (196), Expect = 7e-17
Identities = 55/237 (23%), Positives = 85/237 (35%), Gaps = 2/237 (0%)
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN 472
+ +R+ + N + +F NLT L L N L + + L + S N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 473 IYGSIPP-EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS 531
S+ P +L L L + P F L +L L L N L F
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L L +L L N++SS ++ L L L L N+ H P F L L L L N
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 592 FLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS 648
L + + +L+ L L+ N + L + + +E+ +P
Sbjct: 212 NLSALPTEALAPLRALQYLRLNDNP-WVCDCRARPLWAWLQKFRGSSSEVPCSLPQR 267
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.2 bits (188), Expect = 7e-16
Identities = 53/257 (20%), Positives = 82/257 (31%), Gaps = 29/257 (11%)
Query: 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQ----------------------- 136
+ L N + L L L +N
Sbjct: 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90
Query: 137 --LSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLG 194
L V P L L L+ D L P L+ + L L N +
Sbjct: 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR 150
Query: 195 NLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYK 254
+L NL +L+L+ N + L+SL L L QN++ P + +L L LYL+
Sbjct: 151 DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFA 210
Query: 255 NSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG 314
N+L + L++L L L++N + L ++ + S+P
Sbjct: 211 NNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQ--- 266
Query: 315 NLEALSELGLYINQLDG 331
L L N L G
Sbjct: 267 RLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.1 bits (180), Expect = 8e-15
Identities = 45/240 (18%), Positives = 74/240 (30%), Gaps = 4/240 (1%)
Query: 44 PNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHL 103
P +S + L + + + LS + +F L
Sbjct: 48 PAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRL 107
Query: 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHG 163
L+L L P L+ L+ L L +N L + L L L+ N +
Sbjct: 108 HTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS 167
Query: 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL 223
L ++ L L N + P + +L L LYL N+L + L +L
Sbjct: 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227
Query: 224 SILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFG 283
L L+ N + + L + + +P L L+ N L G
Sbjct: 228 QYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQ---RLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.1 bits (123), Expect = 1e-07
Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 1/126 (0%)
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592
Q + L N++S S L L L +N F L L +LDLS N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 593 LQGEIPP-QICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAF 651
+ P + L L+L L +L PG F + +L + + N LQ ++
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 652 KDGLME 657
L
Sbjct: 152 LGNLTH 157
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 88.9 bits (219), Expect = 2e-19
Identities = 52/283 (18%), Positives = 99/283 (34%), Gaps = 49/283 (17%)
Query: 734 GDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFN 792
G+P+ + ++ +++ +G G +V+ A+ + + A+K
Sbjct: 7 GEPYK-------DARY---ILVR---------KLGWGHFSTVWLAKDMVNNTHVAMKIVR 47
Query: 793 SQLLFDEMADQDEFLNEVLALTEIRHRNIIK---------------FHGFCSNAQHSFIV 837
++ E +E+ L + + K F+ N H +V
Sbjct: 48 GDKVYTE-----AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMV 102
Query: 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897
E L L I K + + + K + L Y+H C I+H DI +NVL
Sbjct: 103 FEVLGENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVL 158
Query: 898 LDSE-HEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
++ ++ IA N ++T T Y +PE+ D+ S L
Sbjct: 159 MEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACL 218
Query: 955 ALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
E+I G+ + S++ I Q ++ PS +
Sbjct: 219 IFELITGDFL--FEPDEGHSYTKDDDHIAQIIELLGELPSYLL 259
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 82.1 bits (202), Expect = 2e-18
Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 19/169 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFN------SQLLFDEMADQDEFLNEVL 811
+D G+ +G+G++ +V+ VK ++ F +
Sbjct: 1 VDAIGKL--MGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAI 58
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
R + K G +++ + ++ L D V+ +
Sbjct: 59 RSARNEFRALQKLQGLAVPKVYAW------EGNAVLMELIDAKELYRVRVENPDEVLDMI 112
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL-NPHS 919
++ +H IVHGD+S NVL+ E + DF + +
Sbjct: 113 LEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEEGW 157
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 63.7 bits (153), Expect = 4e-11
Identities = 55/339 (16%), Positives = 94/339 (27%), Gaps = 27/339 (7%)
Query: 269 KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ 328
+ EL+L+ L S+P +L SL NSL+ +P +L++L +
Sbjct: 38 RQAHELELNNLGL-SSLPELPPHLESLVAS---CNSLT-ELPELPQSLKSLLVDNNNLKA 92
Query: 329 LDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL 388
L + P L L S K+ N+ +P +L
Sbjct: 93 LSDLPP----------LLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSL 142
Query: 389 TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNN 448
+ N L + N + + +
Sbjct: 143 EFIAAGNNQLEELP---ELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPE 199
Query: 449 LYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKL 508
L + S + F L
Sbjct: 200 LQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGL 259
Query: 509 FSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQ 568
L + LN S + L+ L++S NKL +P L + L S N
Sbjct: 260 SELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKL-IELPALPPRLER---LIASFNH 315
Query: 569 FNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESL 607
+P + +L +L + +N L+ E P ++E L
Sbjct: 316 LAE-VPELPQ---NLKQLHVEYNPLR-EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 54.8 bits (130), Expect = 3e-08
Identities = 55/343 (16%), Positives = 104/343 (30%), Gaps = 28/343 (8%)
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
L+L+ L S+P +L +L NSL +P + +LKSL + N
Sbjct: 38 RQAHELELNNLGLS-SLPELPPHLESL---VASCNSL-TELPELPQSLKSL---LVDNNN 89
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L L L+ S + + + ++ N +P +L
Sbjct: 90 LKALSDLP-------PLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSL 142
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
+ L L + + SI ++ +
Sbjct: 143 EFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQN 202
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
L L N + V + + L+ ++ I
Sbjct: 203 LPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSEL 262
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
P + + +N S+ L+ L++S+N ++ ++P L +LI + N
Sbjct: 263 PPNLYYLNASSNEIRSLCDLP---PSLEELNVSNNKLI-ELP---ALPPRLERLIASFNH 315
Query: 521 LSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLN 563
L+ VP L+ L + N L P ++ L +N
Sbjct: 316 LA-EVP---ELPQNLKQLHVEYNPL-REFPDIPESVEDL-RMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 52.1 bits (123), Expect = 2e-07
Identities = 63/342 (18%), Positives = 97/342 (28%), Gaps = 33/342 (9%)
Query: 293 SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNG 352
+ L N LS S+P +LE+L N L +P +L SL
Sbjct: 38 RQAHELELNNLGLS-SLPELPPHLESLV---ASCNSLT-ELPELPQSLKSLLVDNNNLKA 92
Query: 353 FYGLVPNEIGYLKSLSKLELCRNHL---SGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409
L P S ++LE I N K +
Sbjct: 93 LSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQL 152
Query: 410 RNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNAS 469
L L+ L F L+ + N E +N P L T A
Sbjct: 153 EELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYAD 212
Query: 470 MNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEF 529
N + + + ++ + F + L+
Sbjct: 213 NNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELP--------- 263
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLS 589
N S+ I L LN+SNN+ +P +L L S
Sbjct: 264 -------PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRL---ERLIAS 312
Query: 590 HNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSL 631
N L E+P N L++L++ +N L + P E + L
Sbjct: 313 FNHLA-EVPELPQN---LKQLHVEYNPLREF-PDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.1 bits (115), Expect = 2e-06
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 203 YLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP 262
N+ I ++ SL L++S N+L +P L L N L +P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLER---LIASFNHL-AEVP 320
Query: 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTL 297
+ NLK +L + N L P ++ L +
Sbjct: 321 ELPQNLK---QLHVEYNPL-REFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 48.3 bits (113), Expect = 3e-06
Identities = 23/115 (20%), Positives = 37/115 (32%), Gaps = 12/115 (10%)
Query: 92 FQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCL 151
+ FS L N I L L++ NN+L +P L L
Sbjct: 251 VSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLERL 309
Query: 152 RMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNN 206
+ NHL +P L L + +N P ++ + L +N+
Sbjct: 310 IASF---NHL-AEVPELPQNLK---QLHVEYNPLRE-FPDIPESVED---LRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 47.9 bits (112), Expect = 4e-06
Identities = 51/319 (15%), Positives = 90/319 (28%), Gaps = 25/319 (7%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L L + G L P +L+SL N L+ +P +L L++ N
Sbjct: 38 RQAHELELNNLGLSSL-PELPPHLESLV---ASCNSLT-ELPELPQSLKSLLVDNNNLKA 92
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGD------HPNLTFLDLSQNNLYGEIS 454
L L P S +L + L
Sbjct: 93 LSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQL 152
Query: 455 FNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKL 514
L A + S ++ ++ L ++
Sbjct: 153 EELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYAD 212
Query: 515 ILNLN-----QLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQF 569
L S + + LS+L N
Sbjct: 213 NNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNAS 272
Query: 570 NHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMR 629
+++I + + L EL++S+N L E+P LE L S N+L ++ E +
Sbjct: 273 SNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR---LERLIASFNHLAEVP----ELPQ 324
Query: 630 SLSRIDIAYNELQGPIPNS 648
+L ++ + YN L+ P+
Sbjct: 325 NLKQLHVEYNPLRE-FPDI 342
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.0 bits (107), Expect = 2e-05
Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 9/92 (9%)
Query: 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF 239
N S I +L L ++NN L +P L L S N L +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKL-IELP---ALPPRLERLIASFNHL-AEVPE 321
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSL 271
NL L++ N L P + +++ L
Sbjct: 322 LPQNLKQ---LHVEYNPLRE-FPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 44.0 bits (102), Expect = 7e-05
Identities = 50/336 (14%), Positives = 93/336 (27%), Gaps = 27/336 (8%)
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS 236
L L + S +P +L L + NSL +P + +L SL + + + L
Sbjct: 42 ELELNNLGLS-SLPELPPHLE---SLVASCNSL-TELPELPQSLKSLLVDNNNLKALSDL 96
Query: 237 IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLT 296
P L S S ++ +N +P +L +
Sbjct: 97 PPL----------LEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIA 146
Query: 297 LMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGL 356
+ L L + SI +++ L
Sbjct: 147 AGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFL 206
Query: 357 VPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416
+ +L + + N + + F L+ L
Sbjct: 207 TTIYADNNLLKTLPDLPPSL---EALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELP 263
Query: 417 RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGS 476
+ N ++ P+L L++S N L P+L AS N++
Sbjct: 264 PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKL----IELPALPPRLERLIASFNHL-AE 318
Query: 477 IPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLN 512
+P L+ L + N + + P E + L
Sbjct: 319 VPELPQ---NLKQLHVEYNPLR-EFPDIPESVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 42.5 bits (98), Expect = 2e-04
Identities = 52/325 (16%), Positives = 90/325 (27%), Gaps = 25/325 (7%)
Query: 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY---FDV 158
L L+ L ++P +L +L N L+ +P+ L L + +
Sbjct: 39 QAHELELNNLGL-SSLPELPPHL---ESLVASCNSLT-ELPELPQSLKSLLVDNNNLKAL 93
Query: 159 NHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMG 218
+ L + + + L N+ +I N + + N +
Sbjct: 94 SDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLE 153
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
L L L + L + + + + NL L +
Sbjct: 154 ELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADN 213
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSG--------SIPPTQGNLEALSELGLYINQLD 330
N L L S + + + L L Y+N
Sbjct: 214 NLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASS 273
Query: 331 GVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTK 390
I SL L + +N L P L +L NHL+ +P NL +
Sbjct: 274 NEIRSLCDLPPSLEELNVSNNKLIEL-PALPP---RLERLIASFNHLAE-VPELPQNLKQ 328
Query: 391 LVLVNMCENHLFGLIPKSFRNLTSL 415
L + N L P ++ L
Sbjct: 329 LHVEY---NPLREF-PDIPESVEDL 349
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.3 bits (149), Expect = 1e-10
Identities = 61/462 (13%), Positives = 122/462 (26%), Gaps = 28/462 (6%)
Query: 175 INVLTLCHNNFS-GRIPPSLGNLSNLAYLYLNNNSL----FGSIPNVMGNLNSLSILDLS 229
I L + S R L L + L++ L I + + +L+ L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 230 QNQLRGSIPFSLA-----NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284
N+L + + L L L G V+ + +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 123
Query: 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLR 344
+ + L L+ + + + L + ++ N
Sbjct: 124 LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 183
Query: 345 TLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL 404
P ++ LK S N + + + + + G+
Sbjct: 184 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGM 243
Query: 405 IPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLG 464
L RLR G + GD + ++ +L +
Sbjct: 244 AELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLR---AKESLKELSLAGNELGDEGA 300
Query: 465 TFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGG 524
G + S S+ +F ++ L +
Sbjct: 301 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 360
Query: 525 VPLEFGSLTELQYLDLSANKLS----SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580
+ L+ L L+ +S SS+ ++ L L+LSNN + +
Sbjct: 361 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVES 420
Query: 581 I-----HLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNL 617
+ L +L L + E+ + L+ L +L
Sbjct: 421 VRQPGCLLEQLVLYDIYWSEEME------DRLQALEKDKPSL 456
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (133), Expect = 1e-08
Identities = 55/451 (12%), Positives = 111/451 (24%), Gaps = 22/451 (4%)
Query: 198 NLAYLYLNNNSL-FGSIPNVMGNLNSLSILDLSQNQLRG----SIPFSLANLSNLGILYL 252
++ L + L ++ L ++ L L I +L L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 253 YKNSLFGFIPSVIG-----NLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307
N L + + +L L L G+ S+ +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN 122
Query: 308 SIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSL 367
+ L L + + +S L +
Sbjct: 123 LLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 182
Query: 368 SKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFG 427
P + L +N + + L N+ G
Sbjct: 183 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 242
Query: 428 KVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKL 487
G + L G + + ++ S+ + + + ++L
Sbjct: 243 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARL 302
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS 547
L + F+ + L+ L ++ + D +L
Sbjct: 303 LCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 362
Query: 548 SIPKSMGNLSKLHYLNLSNNQFNHK----IPTEFEKLIHLSELDLSHNFLQGEIPPQIC- 602
+ + S L L L++ + + L ELDLS+N L Q+
Sbjct: 363 GLGQPG---SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVE 419
Query: 603 ----NMESLEELNLSHNNLFDLIPGCFEEMR 629
LE+L L + + + +
Sbjct: 420 SVRQPGCLLEQLVLYDIYWSEEMEDRLQALE 450
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (131), Expect = 2e-08
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 534 ELQYLDLSANKLSSS-IPKSMGNLSKLHYLNLSNNQFNHK----IPTEFEKLIHLSELDL 588
++Q LD+ +LS + + + L + + L + I + L+EL+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 589 SHNFLQGEIPPQIC-----NMESLEELNLSHNNLFDLIPGCFEEMRS 630
N L + +++L+L + L G
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLR 109
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (110), Expect = 8e-06
Identities = 62/472 (13%), Positives = 120/472 (25%), Gaps = 44/472 (9%)
Query: 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFS 186
+++LD+ +LS E+ + L V+ L +
Sbjct: 4 IQSLDIQCEELSDARWAEL-----------------------LPLLQQCQVVRLDDCGLT 40
Query: 187 GR----IPPSLGNLSNLAYLYLNNNSLFGSIPNVMG-----NLNSLSILDLSQNQLRGSI 237
I +L LA L L +N L + + + L L L G+
Sbjct: 41 EARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAG 100
Query: 238 PFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTL 297
L++ + + L LD + + +S
Sbjct: 101 CGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 160
Query: 298 MSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV 357
++ + T N + + Q P + L DN
Sbjct: 161 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 220
Query: 358 PNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLER 417
L + G+ G L + G+ K +L + R
Sbjct: 221 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLR 280
Query: 418 LRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSI 477
+ + L E + L L + E + + + + +
Sbjct: 281 AKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNR 340
Query: 478 PPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS----LT 533
S ++ D + + L L L +S +
Sbjct: 341 FLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLW---LADCDVSDSSCSSLAATLLANH 397
Query: 534 ELQYLDLSANKLSSSIPKSMG-----NLSKLHYLNLSNNQFNHKIPTEFEKL 580
L+ LDLS N L + + L L L + ++ ++ + L
Sbjct: 398 SLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (108), Expect = 1e-05
Identities = 27/213 (12%), Positives = 52/213 (24%), Gaps = 10/213 (4%)
Query: 484 SSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKLILNLNQLSGGVPLEFGS----LTELQYL 538
S +Q LD+ + + L + L+ L+ + S L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 539 DLSANKLSSSIPKSMG-----NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
+L +N+L + K+ L+L N + +
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 120
Query: 594 QGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKD 653
+ + L+ + C S + + + D
Sbjct: 121 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 180
Query: 654 GLMEGNKGLCGNFKALPSCDAFMSHEQTSRKKW 686
G + LC K P + E
Sbjct: 181 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSD 213
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 6e-05
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 6/94 (6%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLA-NLSNLGILYLYKNSL----FGFIPSVIGNLKSLFE 273
+L+ + LD+ +L + L L ++ L L I S + +L E
Sbjct: 1 SLD-IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAE 59
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307
L+L N+L + SL
Sbjct: 60 LNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.5 bits (145), Expect = 2e-10
Identities = 47/210 (22%), Positives = 72/210 (34%), Gaps = 7/210 (3%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
S + +N L +PP + L L N L + T L L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLPKD--TTILHLSENLLYTFSLATLMPYTRLTQL- 60
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPN 215
+++ + G L ++ +N +P L L L ++ N L
Sbjct: 61 -NLDRAELTKLQVDGTLPVLG-TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ L L L L N+L+ P L L L L N+L ++ L++L L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSL 305
L EN L+ +IP F L L N
Sbjct: 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (142), Expect = 5e-10
Identities = 47/195 (24%), Positives = 68/195 (34%), Gaps = 6/195 (3%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
C +PP L + L+L+ N L+ + L+ L+L + +L
Sbjct: 17 CDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDG 74
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSL 300
L LG L L N L +L LD+S N+L + L L + L
Sbjct: 75 --TLPVLGTLDLSHNQLQSLPLLGQTL-PALTVLDVSFNRLTSLPLGALRGLGELQELYL 131
Query: 301 FNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360
N L P L +L L N L + + L +L TL L +N Y + P
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTI-PKG 190
Query: 361 IGYLKSLSKLELCRN 375
L L N
Sbjct: 191 FFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.6 bits (135), Expect = 4e-09
Identities = 38/189 (20%), Positives = 56/189 (29%), Gaps = 6/189 (3%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+PP + L+L +N Y + L++L L + G L L
Sbjct: 25 LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNL--DRAELTKLQVDGTLPVLG 80
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
+++ N L L + N L A L L L N L
Sbjct: 81 TLDLSHNQLQSLPLLGQTLPALTVL-DVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139
Query: 453 ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLN 512
PKL + + NN+ + L L L N + IP F L
Sbjct: 140 PPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLP 198
Query: 513 KLILNLNQL 521
L+ N
Sbjct: 199 FAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (134), Expect = 4e-09
Identities = 38/208 (18%), Positives = 61/208 (29%), Gaps = 50/208 (24%)
Query: 72 CNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALD 131
+ V + ++ L D L+LS N+LY + ++L L+
Sbjct: 6 VSKVASHLEVNCDKRNLTALPPDLP----KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 132 LGNNQ---------------------------------------------LSGVIPQEIG 146
L + L+ + +
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 147 HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNN 206
L L+ LY N L P + + L+L +NN + L L NL L L
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181
Query: 207 NSLFGSIPNVMGNLNSLSILDLSQNQLR 234
NSL+ +IP + L L N
Sbjct: 182 NSLY-TIPKGFFGSHLLPFAFLHGNPWL 208
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (134), Expect = 5e-09
Identities = 48/231 (20%), Positives = 73/231 (31%), Gaps = 31/231 (13%)
Query: 265 IGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGL 324
+ + S E++ + L ++P T++ L N L T L++L L
Sbjct: 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNL 62
Query: 325 YINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS 384
+L G L L TL L N L ++ N L+ + +
Sbjct: 63 DRAELT--KLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVL-DVSFNRLTSLPLGA 119
Query: 385 IGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDL 444
+ L +L + + N L L P LE+L NNL NL L L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 179
Query: 445 SQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495
+N+LY +IP S L L N
Sbjct: 180 QENSLY-------------------------TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.4 bits (124), Expect = 1e-07
Identities = 39/203 (19%), Positives = 56/203 (27%), Gaps = 53/203 (26%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ--------------- 520
++PP++ +L LS N + L +L L+ +
Sbjct: 24 ALPPDLPKD--TTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGT 81
Query: 521 ------------------------------LSGGVPLEFGSLTELQYLDLSANKLSSSIP 550
L+ L ELQ L L N+L + P
Sbjct: 82 LDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPP 141
Query: 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEEL 610
+ KL L+L+NN L +L L L N L IP L
Sbjct: 142 GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFA 200
Query: 611 NLSHNNLFDLIPGCFEEMRSLSR 633
L N C E+ R
Sbjct: 201 FLHGNPWL-----CNCEILYFRR 218
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.5 bits (145), Expect = 2e-10
Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 17/266 (6%)
Query: 73 NLVGRVISISLSSLGLNGTFQD---FSFSSFPHLMYLNLS-CNVLYGNIPPQISNLSKLR 128
++ GR++S + + +F D S + +++LS + + +S SKL+
Sbjct: 15 DVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQ 74
Query: 129 ALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGR 188
L L +LS I + + L L L+ S + L +
Sbjct: 75 NLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDF 134
Query: 189 IPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLN---------SLSILDLSQNQLRGSIPF 239
+ + +L G N+ + + + L+
Sbjct: 135 TEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQ 194
Query: 240 SLANLSNLGILYLYK-NSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLM 298
L+ L L L + + +G + +L L + G++ L L L +
Sbjct: 195 EFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQIN 254
Query: 299 SLFNNSLSGSIPPTQGNLEALSELGL 324
+ + PT GN + G+
Sbjct: 255 ---CSHFTTIARPTIGNKKNQEIWGI 277
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.7 bits (135), Expect = 4e-09
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLS 546
Q LDL+ ++ + +L S + + PL E S +Q++DLS + +
Sbjct: 3 QTLDLTGKNLHPDVT---GRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIE 59
Query: 547 -SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNM 604
S++ + SKL L+L + + I K +L L+LS E Q
Sbjct: 60 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS 118
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (130), Expect = 2e-08
Identities = 46/270 (17%), Positives = 89/270 (32%), Gaps = 18/270 (6%)
Query: 130 LDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPL-EIGKLSLINVLTLCHNNFSGR 188
LDL L P G L ++ F PL E + + L ++
Sbjct: 5 LDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVS 61
Query: 189 -IPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS-----LA 242
+ L S L L L L I N + ++L L+LS +
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 243 NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFN 302
L L + + + + +V +++ +L+LS + + + + +
Sbjct: 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 181
Query: 303 NSL----SGSIPPTQGNLEALSELGL-YINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV 357
S L L L L + +G + +L+TL ++ G +
Sbjct: 182 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTL 241
Query: 358 PNEIGYLKSLSKLELCRNHLSGVIPHSIGN 387
++L L++ +H + + +IGN
Sbjct: 242 QLLK---EALPHLQINCSHFTTIARPTIGN 268
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.7 bits (117), Expect = 7e-07
Identities = 39/263 (14%), Positives = 79/263 (30%), Gaps = 19/263 (7%)
Query: 404 LIPKSFRNLTS--LERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE-ISFNWRNF 460
L P L S + R ++ + + E F + +DLS + + +
Sbjct: 12 LHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFS-PFRVQHMDLSNSVIEVSTLHGILSQC 70
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
KL + + I + +S L L+LS + +Q LNL+
Sbjct: 71 SKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSW 130
Query: 521 LSGGVPLEFGSLTELQYLDLSANKLSS---------SIPKSMGNLSKLHYLNLSNNQFNH 571
++ LS + +H + +
Sbjct: 131 CFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKN 190
Query: 572 KIPTEFEKLIHLSELDLSH-NFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEM-R 629
EF +L +L L LS + E ++ + +L+ L + + G + +
Sbjct: 191 DCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI----VPDGTLQLLKE 246
Query: 630 SLSRIDIAYNELQGPIPNSTAFK 652
+L + I + + K
Sbjct: 247 ALPHLQINCSHFTTIARPTIGNK 269
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.7 bits (117), Expect = 8e-07
Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 50/305 (16%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL-DGV 332
LDL+ L + + + + + + + + L + +
Sbjct: 5 LDLTGKNLHPDVTGRLLSQGVIAF-RCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEVST 62
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLEL--CRNHLSGVIPHSIGNLTK 390
+ + S L+ L L + N + +L +L L C + + + ++
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122
Query: 391 LVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY 450
L +N+ F + ++ V L +N
Sbjct: 123 LDELNLSWCF------------------DFTEKHVQVAVAHVSETITQLNLSGYRKNLQK 164
Query: 451 GEISFNWRNFPKLGTFNASMN-NIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLF 509
++S R P L + S + + E + LQ L LS
Sbjct: 165 SDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLS---------------- 208
Query: 510 SLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQF 569
+ LE G + L+ L + ++ L L ++ + F
Sbjct: 209 -------RCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPH---LQINCSHF 258
Query: 570 NHKIP 574
Sbjct: 259 TTIAR 263
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (87), Expect = 0.004
Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 3/116 (2%)
Query: 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFD-L 620
L+L+ + + + +F+ + ++ ++LS++ +
Sbjct: 5 LDLTGKNLHPDVTGRLLSQ-GVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEVST 62
Query: 621 IPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLMEGNKGLCGNFKALPSCDAFM 676
+ G + L + + L PI N+ A L+ N C F
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS 118
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 59.7 bits (143), Expect = 2e-10
Identities = 47/252 (18%), Positives = 76/252 (30%), Gaps = 42/252 (16%)
Query: 315 NLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCR 374
L ++ + + + + +L + TL + G + + YL +L LEL
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKD 72
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFG 434
N + + NLTK+ + + N L + + L Q
Sbjct: 73 NQI--TDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT----DVTPLA 126
Query: 435 DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
NL L L N + S+ N S + + SKL L
Sbjct: 127 GLSNLQVLYLDLNQITNISPLAGLTNL----QYLSIGNAQVSDLTPLANLSKLTTLKADD 182
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMG 554
N I P SL L + L N++S P +
Sbjct: 183 NKISDISP--------------------------LASLPNLIEVHLKNNQISDVSP--LA 214
Query: 555 NLSKLHYLNLSN 566
N S L + L+N
Sbjct: 215 NTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 56.2 bits (134), Expect = 3e-09
Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 18/228 (7%)
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
L + + ++++ + ++ +L + L + E NL L+L
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGV--TTIEGVQYLNNLIGLELKD 72
Query: 447 NNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE 506
N + + + +I + ++ +
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 507 KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566
L+ I N++ L+G L++ S+ Q S + NLSKL L +
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQV----------SDLTPLANLSKLTTLKADD 182
Query: 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSH 614
N+ + P L +L E+ L +N + P + N +L + L++
Sbjct: 183 NKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 50.8 bits (120), Expect = 2e-07
Identities = 41/224 (18%), Positives = 77/224 (34%), Gaps = 26/224 (11%)
Query: 95 FSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRML 154
F + + + + + + + ++L + L ++ + + + +L L L
Sbjct: 13 FPDPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGL 68
Query: 155 YFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGS-- 212
N + P + L+ I L L N + L +
Sbjct: 69 ELKDNQITDLAP--LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLA 126
Query: 213 --------------IPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258
I N+ ++ LS + S LANLS L L N +
Sbjct: 127 GLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKIS 186
Query: 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFN 302
P + +L +L E+ L NQ+ PL +N S+L +++L N
Sbjct: 187 DISP--LASLPNLIEVHLKNNQISDVSPL--ANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 18/227 (7%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
L + + ++ + ++ + A+L + L + + + L +L L+L +
Sbjct: 17 ALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKD 72
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
NQ+ PL + +S +I Q + ++
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398
L + GL + + + NL+KL + +
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYL----------SIGNAQVSDLTPLANLSKLTTLKADD 182
Query: 399 NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLS 445
N + + P +L +L + N + + NL + L+
Sbjct: 183 NKISDISP--LASLPNLIEVHLKNNQISD--VSPLANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 5e-05
Identities = 41/254 (16%), Positives = 74/254 (29%), Gaps = 43/254 (16%)
Query: 267 NLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYI 326
L + ++ ++ + ++ + +L +T +S F +
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTG---------------------V 53
Query: 327 NQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG 386
++G + L++L L L DN L P + + +L I
Sbjct: 54 TTIEG-----VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQS 108
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
T + + + + L N + L G + N DL+
Sbjct: 109 IKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTP 168
Query: 447 NNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE 506
N KL T A N I P + L + L +N I P
Sbjct: 169 ----------LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LA 214
Query: 507 KLFSLNKLILNLNQ 520
+L + L NQ
Sbjct: 215 NTSNLFIVTLT-NQ 227
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 5e-05
Identities = 39/228 (17%), Positives = 70/228 (30%), Gaps = 18/228 (7%)
Query: 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182
L+ + G + ++ + Q L + L + +I + L+ + L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKD 72
Query: 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLA 242
N + P L N +I + + + +L
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 243 NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFN 302
L + L G + S +NLS LT + +
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLS----------IGNAQVSDLTPLANLSKLTTLKADD 182
Query: 303 NSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYD 350
N +S P +L L E+ L NQ+ V P + N S+L + L +
Sbjct: 183 NKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.0 bits (138), Expect = 1e-09
Identities = 43/238 (18%), Positives = 80/238 (33%), Gaps = 10/238 (4%)
Query: 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL 401
S R ++ +P+++ ++ +L L + + L + + +N +
Sbjct: 9 SNRVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 402 FGLIPKSFRNLTSLER--LRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEI--SFNW 457
+I + NNL EAF + PNL +L +S +
Sbjct: 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125
Query: 458 RNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILN 517
L ++N +G S + +L L+ N I F + +
Sbjct: 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSD 185
Query: 518 LNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
N L F + LD+S ++ S + NL KL + N + K+PT
Sbjct: 186 NNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---KLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.3 bits (105), Expect = 2e-05
Identities = 31/216 (14%), Positives = 62/216 (28%), Gaps = 7/216 (3%)
Query: 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVN 159
+ + L L S L +++ N + VI ++
Sbjct: 28 PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87
Query: 160 HLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGN 219
+ +L N+ L +N + P + + +L + L+ +
Sbjct: 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNS 147
Query: 220 LNSLSI----LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
LS L L++N ++ + + N+L V LD
Sbjct: 148 FVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILD 207
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPP 311
+S ++ NL L S +N +P
Sbjct: 208 ISRTRIHSLPSYGLENLKKLRARSTYNLK---KLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.6 bits (98), Expect = 1e-04
Identities = 39/223 (17%), Positives = 66/223 (29%), Gaps = 6/223 (2%)
Query: 397 CENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN 456
C+ IP + LRF L AF +L +++SQN++ I +
Sbjct: 15 CQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 72
Query: 457 WRNFPKLGTFNASM--NNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV--QFEKLFSLN 512
+ NN+ P + LQ L +S+ I V L
Sbjct: 73 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 132
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
+ N+N + G E L L+ N + + NN
Sbjct: 133 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEEL 192
Query: 573 IPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHN 615
F LD+S + + N++ L + +
Sbjct: 193 PNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (92), Expect = 7e-04
Identities = 11/77 (14%), Positives = 19/77 (24%)
Query: 560 HYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFD 619
L L+ N F +N L+ L++S +
Sbjct: 156 VILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS 215
Query: 620 LIPGCFEEMRSLSRIDI 636
L E ++ L
Sbjct: 216 LPSYGLENLKKLRARST 232
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (88), Expect = 0.002
Identities = 30/230 (13%), Positives = 62/230 (26%), Gaps = 7/230 (3%)
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
S + ++++ IP L N L L L ++++S+N +
Sbjct: 9 SNRVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 282 FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLS 341
I + + + + + L I+ P + +
Sbjct: 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125
Query: 342 SLRTLYLYDNGFYGLVPNEIGYLKSLS----KLELCRNHLSGVIPHSIGNLTKLVLVNMC 397
SL+ + L + E LS L L +N + + + L
Sbjct: 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSD 185
Query: 398 ENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQN 447
N+L L F + L ++ + + L
Sbjct: 186 NNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (88), Expect = 0.002
Identities = 27/226 (11%), Positives = 64/226 (28%), Gaps = 7/226 (3%)
Query: 202 LYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261
+ + IP+ + + L +LR + + +L + + +N + I
Sbjct: 13 FLCQESKV-TEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 69
Query: 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSE 321
+ + + E + + L L ++ P + +L +
Sbjct: 70 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQK 129
Query: 322 LGLYINQLDGVIPPSIGNLSSLR----TLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL 377
+ L I + + L L+L NG + + N+L
Sbjct: 130 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNL 189
Query: 378 SGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
+ + V++++ + L NL L
Sbjct: 190 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (86), Expect = 0.004
Identities = 29/221 (13%), Positives = 56/221 (25%), Gaps = 6/221 (2%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS 240
C + IP L N L L L +++SQN + I
Sbjct: 15 CQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 72
Query: 241 LANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSL 300
+ + + + + L + + SL + L
Sbjct: 73 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 132
Query: 301 FNNSLSGSIPPTQGNLEALS----ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGL 356
+ + LS L L N + + + +N L
Sbjct: 133 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEEL 192
Query: 357 VPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMC 397
+ L++ R + + + + NL KL +
Sbjct: 193 PNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 233
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (127), Expect = 1e-08
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Query: 491 DLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550
+L + ++ + K + ++ L+L L + + L+ + +++++
Sbjct: 3 ELKPEQV-EQLKLIMSKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRR-SSMAATLR 58
Query: 551 KSMGNLSKLHYLNLSNNQFNHK--IPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLE 608
N+ +L LNLSNN+ + + +K +L L+LS N L+ E LE
Sbjct: 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLE 118
Query: 609 ELNLSHNNLFDLIPGCFEEMRSL 631
EL L N+L D + ++
Sbjct: 119 ELWLDGNSLSDTFRDQSTYISAI 141
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 1e-07
Identities = 36/176 (20%), Positives = 61/176 (34%), Gaps = 26/176 (14%)
Query: 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL 223
+ L + K + L R P L + L ++ + ++ + N+ L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSS-MAATLRIIEENIPEL 67
Query: 224 SILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFG 283
L+LS N+L S++ +L L+LS N+L
Sbjct: 68 LSLNLSNNRLYRLDDM----------------------SSIVQKAPNLKILNLSGNELKS 105
Query: 284 SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV-IPPSIG 338
L L + L NSLS + + A+ E + +LDG +PP I
Sbjct: 106 ERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA 161
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.7 bits (115), Expect = 4e-07
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 525 VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS 584
+ L + L L S + + LN ++ + E + L
Sbjct: 12 LKLIMSKRYDGSQQALDLKGLRS--DPDLVAQNIDVVLNRRSS-MAATLRIIEENIPELL 68
Query: 585 ELDLSHNFLQG--EIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642
L+LS+N L ++ + +L+ LNLS N L + L + + N L
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128
Query: 643 GPIPNSTAFKDGLME 657
+ + + + E
Sbjct: 129 DTFRDQSTYISAIRE 143
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.8 bits (105), Expect = 8e-06
Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 8/140 (5%)
Query: 81 ISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV 140
S +L L G D + + LN ++ + N+ +L +L+L NN+L +
Sbjct: 22 GSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMA-ATLRIIEENIPELLSLNLSNNRLYRL 80
Query: 141 --IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSN 198
+ + L++L N L L+ K + L L N+ S +S
Sbjct: 81 DDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140
Query: 199 LAYL-----YLNNNSLFGSI 213
+ L+ + L I
Sbjct: 141 IRERFPKLLRLDGHELPPPI 160
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (88), Expect = 0.001
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 4/121 (3%)
Query: 407 KSFRNLTSLERLR--FNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW--RNFPK 462
+S +L + ++++ + + P L L+LS N LY + + P
Sbjct: 33 RSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPN 92
Query: 463 LGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS 522
L N S N + + KL+ L L N + Q + ++ + L +L
Sbjct: 93 LKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152
Query: 523 G 523
G
Sbjct: 153 G 153
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (86), Expect = 0.003
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 68 FGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYG--NIPPQISNLS 125
+LV + I + L+ + P L+ LNLS N LY ++ +
Sbjct: 32 LRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAP 91
Query: 126 KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLI 175
L+ L+L N+L + L L+ D N L + + +S I
Sbjct: 92 NLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.1 bits (85), Expect = 0.003
Identities = 24/144 (16%), Positives = 49/144 (34%), Gaps = 12/144 (8%)
Query: 405 IPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLG 464
+ + + L + L+ +++ + N P+L
Sbjct: 12 LKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRR-SSMAATLRIIEENIPELL 68
Query: 465 TFNASMNNIYG--SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS 522
+ N S N +Y + + + L++L+LS N + + + K L +L L+ N LS
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128
Query: 523 GGVPLEFG-------SLTELQYLD 539
+ +L LD
Sbjct: 129 DTFRDQSTYISAIRERFPKLLRLD 152
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (84), Expect = 0.004
Identities = 18/134 (13%), Positives = 44/134 (32%), Gaps = 5/134 (3%)
Query: 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALS 320
+ ++ + L L + +++ ++ + ++ + N+ L
Sbjct: 12 LKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELL 68
Query: 321 ELGLYINQLDGV--IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L L N+L + + + +L+ L L N + L +L L N LS
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128
Query: 379 GVIPHSIGNLTKLV 392
++ +
Sbjct: 129 DTFRDQSTYISAIR 142
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.3 bits (122), Expect = 2e-08
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 536 QYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQG 595
+ L L+ L+ + L + +L+LS+N+ P L L L S N L+
Sbjct: 1 RVLHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALE- 56
Query: 596 EIPPQICNMESLEELNLSHNNLFDL-IPGCFEEMRSLSRIDIAYNELQG 643
+ N+ L+EL L +N L L +++ N L
Sbjct: 57 -NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.5 bits (120), Expect = 4e-08
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 514 LILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKI 573
L L L+ V L + +LDLS N+L + P ++ L L L + +
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQ--ASDNALEN 57
Query: 574 PTEFEKLIHLSELDLSHNFLQG-EIPPQICNMESLEELNLSHNNL 617
L L EL L +N LQ + + L LNL N+L
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.9 bits (116), Expect = 1e-07
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 12/126 (9%)
Query: 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGS 164
L+L+ L + + L + LDL +N+L + P + L CL +
Sbjct: 2 VLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLE--VLQASDNALE 56
Query: 165 IPLEIGKLSLINVLTLCHNNF-SGRIPPSLGNLSNLAYLYLNNNSL------FGSIPNVM 217
+ L + L LC+N L + L L L NSL + ++
Sbjct: 57 NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Query: 218 GNLNSL 223
+++S+
Sbjct: 117 PSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.2 bits (114), Expect = 3e-07
Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
Query: 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG 187
R L L + L+ + + L + L N L P + L + VL N
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNAL-- 55
Query: 188 RIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQL------RGSIPFS 240
+ NL L L L NN L + + + L +L+L N L + +
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 241 LANLSNL 247
L ++S++
Sbjct: 116 LPSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.2 bits (114), Expect = 3e-07
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS 236
VL L H + + + L L + +L L++N L P + L L +L +
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQ--ASDNALE 56
Query: 237 IPFSLANLSNLGILYLYKNSLFGF-IPSVIGNLKSLFELDLSENQL 281
+ANL L L L N L + + L L+L N L
Sbjct: 57 NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.0 bits (111), Expect = 8e-07
Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 469 SMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE 528
+ ++ ++ + + LDLS N + P L L +L + +
Sbjct: 6 AHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLE--VLQASDNALENVDG 60
Query: 529 FGSLTELQYLDLSANKLSS-SIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHL 583
+L LQ L L N+L + + + + +L LNL N + E+L +
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL-CQEEGIQERLAEM 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.6 bits (102), Expect = 1e-05
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 7/120 (5%)
Query: 249 ILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGS 308
+L+L L + + L + LDLS N+L P + + L L ++ +N+
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNA--LE 56
Query: 309 IPPTQGNLEALSELGLYINQLDGVIPP-SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSL 367
NL L EL L N+L + + L L L N L +
Sbjct: 57 NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE-EGIQERLAEM 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.1 bits (93), Expect = 2e-04
Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 7/120 (5%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L L+ L ++ L +T + L +N L +PP L L L +
Sbjct: 3 LHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVL--QASDNALEN 57
Query: 334 PPSIGNLSSLRTLYLYDNGFYGL-VPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+ NL L+ L L +N + L L L N L L +++
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAEML 116
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.5 bits (89), Expect = 6e-04
Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 7/115 (6%)
Query: 405 IPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLG 464
+ L + L + N L A L L S N L +
Sbjct: 12 VLCHLEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDNALENVDGVANLPRLQ-- 68
Query: 465 TFNASMNNI-YGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ---FEKLFSLNKLI 515
N + + + +L +L+L N + + +Q E L S++ ++
Sbjct: 69 ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 123
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 51.9 bits (123), Expect = 6e-08
Identities = 28/195 (14%), Positives = 62/195 (31%), Gaps = 22/195 (11%)
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
+ + N+ + + + ++ L S++++ N +++ K + PN+T L L+
Sbjct: 22 AFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDI--KSVQGIQYLPNVTKLFLNG 77
Query: 447 NNLYGEISF---------------NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLD 491
N L ++ + +I L L+
Sbjct: 78 NKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLE 137
Query: 492 LSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPK 551
+ + + + + LT+LQ L LS N +S +
Sbjct: 138 SLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIV-PLAGLTKLQNLYLSKNHISD--LR 194
Query: 552 SMGNLSKLHYLNLSN 566
++ L L L L +
Sbjct: 195 ALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 48.9 bits (115), Expect = 7e-07
Identities = 38/210 (18%), Positives = 76/210 (36%), Gaps = 16/210 (7%)
Query: 93 QDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLR 152
Q FS +F + NL + + + L+ + + N+ + V I +L +
Sbjct: 16 QIFSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG--IQYLPNVT 71
Query: 153 MLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGS 212
L+ + N L PL L F + + +
Sbjct: 72 KLFLNGNKLTDIKPLA--------NLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNG 123
Query: 213 IPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLF 272
I ++ G ++ + L + + L+ L+ L L L N + +P + L L
Sbjct: 124 ISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 181
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFN 302
L LS+N + + + + L +L ++ LF+
Sbjct: 182 NLYLSKNHI-SDLR-ALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 46.2 bits (108), Expect = 5e-06
Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 18/213 (8%)
Query: 164 SIPLEIGKL----SLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGN 219
++P I ++ + + S + L+++ + NN+ + +
Sbjct: 9 TVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQG--IQY 66
Query: 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279
L +++ L L+ N+L P + NL L + E+
Sbjct: 67 LPNVTKLFLNGNKLTDIKPLA-----NLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEH 121
Query: 280 QLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339
I +L N ++ L+ LS I+ + +
Sbjct: 122 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDI-----VPLAG 176
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLEL 372
L+ L+ LYL N L + LK+L LEL
Sbjct: 177 LTKLQNLYLSKNHISDL--RALAGLKNLDVLEL 207
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 22/197 (11%)
Query: 455 FNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKL 514
F+ F + N ++ ++ + + + + +++ I +Q+ L ++ KL
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQGIQY--LPNVTKL 73
Query: 515 ILNLNQLSGGVPLEFGSLTELQYLDLSANKLS---------------SSIPKSMGNLSKL 559
LN N+L+ PL +LD + K + + L L
Sbjct: 74 FLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHL 133
Query: 560 HYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFD 619
L N + + + +I P + + L+ L LS N++ D
Sbjct: 134 PQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD 192
Query: 620 LIPGCFEEMRSLSRIDI 636
L +++L +++
Sbjct: 193 LRA--LAGLKNLDVLEL 207
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 38.5 bits (88), Expect = 0.002
Identities = 33/228 (14%), Positives = 65/228 (28%), Gaps = 40/228 (17%)
Query: 122 SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181
++ +L ++ + Q L + + + + + ++
Sbjct: 21 DAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQGIQ------------- 65
Query: 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSL 241
L N+ L+LN N L P L+ L
Sbjct: 66 -------------YLPNVTKLFLNGNKLTDIKP--------LANLKNLGWLFLDENKVKD 104
Query: 242 ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301
+ + I + G + L + S L+ L +SL
Sbjct: 105 LSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLE 164
Query: 302 NNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLY 349
+N +S +P L L L L N + + ++ L +L L L+
Sbjct: 165 DNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.7 bits (86), Expect = 0.004
Identities = 29/220 (13%), Positives = 59/220 (26%), Gaps = 46/220 (20%)
Query: 290 SNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLY 349
+ +L S++ ++ TQ L ++ ++ + + V I L ++ L+L
Sbjct: 21 DAFAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLN 76
Query: 350 DNGFYGLVP---------------NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLV 394
N + P +L L I L L +
Sbjct: 77 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 136
Query: 395 NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEIS 454
+ + + + ++N + L L LS+N++
Sbjct: 137 ESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDI-VPLAGLTKLQNLYLSKNHI----- 190
Query: 455 FNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
S + L VL+L S
Sbjct: 191 ---------------------SDLRALAGLKNLDVLELFS 209
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 51.7 bits (122), Expect = 6e-08
Identities = 37/166 (22%), Positives = 54/166 (32%), Gaps = 7/166 (4%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEI-GHLTCLRMLYFDVNHLHGSIPLEIGKLSLI 175
IP I L L +N+L + + G L L L N L G P S I
Sbjct: 23 IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI 80
Query: 176 NVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRG 235
L L N L L L L +N + +P +LNSL+ L+ +
Sbjct: 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN-LASNPFN 139
Query: 236 SIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
L L + PS ++ + DL ++
Sbjct: 140 CNCHLAWFAEWLRKKSLNGGAARCGAPS---KVRDVQIKDLPHSEF 182
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 51.0 bits (120), Expect = 1e-07
Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 7/165 (4%)
Query: 333 IPPSIGNLSSLRTLYLYDN-GFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKL 391
IP I L L DN G L L KLEL RN L+G+ P++ + +
Sbjct: 23 IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI 80
Query: 392 VLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451
+ + EN + + K F L L+ L N + + +F +LT L+L+ N
Sbjct: 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140
Query: 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNH 496
W L + + P ++ +Q+ DL +
Sbjct: 141 NCHLAW-FAEWLRKKSLNGGAARCGAPSKV---RDVQIKDLPHSE 181
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 46.7 bits (109), Expect = 3e-06
Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 7/183 (3%)
Query: 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVM-GNLNSLSILDLSQNQLRGSIPF 239
C IP + + L LN+N L + + G L L L+L +NQL G P
Sbjct: 15 CTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPN 72
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMS 299
+ S++ L L +N + + L L L+L +NQ+ +P SF +L+SLT ++
Sbjct: 73 AFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132
Query: 300 LFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPN 359
L +N + E L + L P + ++ L + F N
Sbjct: 133 LASNPFNC-NCHLAWFAEWLRKKSLNGGAARCGAPSK---VRDVQIKDLPHSEFKCSSEN 188
Query: 360 EIG 362
G
Sbjct: 189 SEG 191
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 44.0 bits (102), Expect = 2e-05
Identities = 37/156 (23%), Positives = 53/156 (33%), Gaps = 5/156 (3%)
Query: 437 PNLTFLDLSQNNLYGEISFNWR-NFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495
+ T L L+ N L S P L N + G P +S +Q L L N
Sbjct: 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88
Query: 496 HIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGN 555
I F L L L L NQ+S +P F L L L+ A+ +
Sbjct: 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN-LASNPFNCNCHLAWF 147
Query: 556 LSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L +L+ P++ + DL H+
Sbjct: 148 AEWLRKKSLNGGAARCGAPSKVR---DVQIKDLPHS 180
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 42.1 bits (97), Expect = 1e-04
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 4/119 (3%)
Query: 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVN 159
H+ L L N + L +L+ L+L +NQ+S V+P HL L L N
Sbjct: 77 ASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Query: 160 HLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMG 218
+ + L + +L P + ++ L ++ S N G
Sbjct: 137 PFNCNCHLAWF-AEWLRKKSLNGGAARCGAPSK---VRDVQIKDLPHSEFKCSSENSEG 191
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 40.6 bits (93), Expect = 4e-04
Identities = 36/175 (20%), Positives = 58/175 (33%), Gaps = 7/175 (4%)
Query: 397 CENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAF-GDHPNLTFLDLSQNNLYGEISF 455
C IP+ L N N L + G P+L L+L +N L G
Sbjct: 15 CTGRGLKEIPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPN 72
Query: 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI 515
+ + N I +L+ L+L N I +P FE L SL L
Sbjct: 73 AFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132
Query: 516 LNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L N + L + + + L+ P + + +L +++F
Sbjct: 133 LASNPFNCNCHLAWFAEWLRK-KSLNGGAARCGAPSK---VRDVQIKDLPHSEFK 183
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.3 bits (119), Expect = 1e-07
Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 3/125 (2%)
Query: 527 LEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSEL 586
++ + + LDL K+ I L + ++ S+N+ F L L L
Sbjct: 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTL 68
Query: 587 DLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646
+++N + + L EL L++N+L +L
Sbjct: 69 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKK 128
Query: 647 NSTAF 651
+ +
Sbjct: 129 HYRLY 133
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (101), Expect = 3e-05
Identities = 27/136 (19%), Positives = 45/136 (33%), Gaps = 7/136 (5%)
Query: 119 PQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178
Q +N + R LDL ++ VI L + F N + L + L
Sbjct: 12 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTL 68
Query: 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSL----FGSIPNVMGNLNSLSILDLSQNQLR 234
+ +N L +L L L NNSL + +L L IL +
Sbjct: 69 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKK 128
Query: 235 GSIPFSLANLSNLGIL 250
+ + + + +L
Sbjct: 129 HYRLYVIYKVPQVRVL 144
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.6 bits (99), Expect = 4e-05
Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 7/139 (5%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
+++ L+L + I + L + A+D +N++ + L L+ L
Sbjct: 13 QYTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTLL 69
Query: 156 FDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG-RIPPSLGNLSNLAYLYLNN---NSLFG 211
+ N + L + L L +N+ L +L +L YL + +
Sbjct: 70 VNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKH 129
Query: 212 SIPNVMGNLNSLSILDLSQ 230
V+ + + +LD +
Sbjct: 130 YRLYVIYKVPQVRVLDFQK 148
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (93), Expect = 3e-04
Identities = 16/138 (11%), Positives = 34/138 (24%), Gaps = 7/138 (5%)
Query: 408 SFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFN 467
+ N L + + +D S N + + +L T
Sbjct: 13 QYTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIR--KLDGFPLLRRLKTLL 69
Query: 468 ASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI----LNLNQLSG 523
+ N I L L L++N +V + + +
Sbjct: 70 VNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKH 129
Query: 524 GVPLEFGSLTELQYLDLS 541
+ +++ LD
Sbjct: 130 YRLYVIYKVPQVRVLDFQ 147
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (89), Expect = 0.001
Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 9/147 (6%)
Query: 228 LSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL 287
L+ + + ++ N L L + I ++ L +D S+N++
Sbjct: 3 LTAELIEQAAQYT--NAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIRKLDG- 58
Query: 288 SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLY 347
F L L + + NN + L L+EL L N L + T
Sbjct: 59 -FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYL 117
Query: 348 LYDNGFYGLVPNE----IGYLKSLSKL 370
+ I + + L
Sbjct: 118 CILRNPVTNKKHYRLYVIYKVPQVRVL 144
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (88), Expect = 0.001
Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 7/135 (5%)
Query: 459 NFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNL 518
N + + I I + +D S N I F L L L++N
Sbjct: 16 NAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTLLVNN 72
Query: 519 NQLSGGVPLEFGSLTELQYLDLSANKLSS-SIPKSMGNLSKLHYLNLSNNQFNHKI---P 574
N++ +L +L L L+ N L + +L L YL + N +K
Sbjct: 73 NRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRL 132
Query: 575 TEFEKLIHLSELDLS 589
K+ + LD
Sbjct: 133 YVIYKVPQVRVLDFQ 147
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 47.6 bits (111), Expect = 5e-06
Identities = 48/333 (14%), Positives = 100/333 (30%), Gaps = 40/333 (12%)
Query: 294 SLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDG----VIPPSIGNLSSLRTLYLY 349
SL L ++ S+ +++ E+ L N + + +I + L
Sbjct: 9 SLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 350 DNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPH---SIGNLTKLVLVNMCENHLFGLIP 406
D + L+ L + L L V + ++ + ++ +
Sbjct: 68 DIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLY 127
Query: 407 KSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL----YGEISFNWRNFPK 462
L + + V + + P L + +N L E + +++
Sbjct: 128 LHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL 187
Query: 463 LGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIV---------GKIPVQFEKLFSLNK 513
L T N I + +L + + + + +L +
Sbjct: 188 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE 247
Query: 514 LILNLNQLSG------GVPLEFGSLTELQYLDLSANKLSSSIPKSM-----GNLSKLHYL 562
L LN LS LQ L L N++ +++ + L +L
Sbjct: 248 LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFL 307
Query: 563 NLSNNQFNH--KIPTEFEKLI------HLSELD 587
L+ N+F+ + E ++ L ELD
Sbjct: 308 ELNGNRFSEEDDVVDEIREVFSTRGRGELDELD 340
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 47.6 bits (111), Expect = 5e-06
Identities = 37/306 (12%), Positives = 94/306 (30%), Gaps = 32/306 (10%)
Query: 357 VPNEIGYLKSLSKLELCRNHLSGVIPHSIG-------NLTKLVLVNMCENHLFGLIPKSF 409
V + S+ ++ L N + + +L ++ + IP++
Sbjct: 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEAL 82
Query: 410 RNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNAS 469
R L + + LS++ + + +
Sbjct: 83 RLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIA 142
Query: 470 MNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEF 529
++ + ++ L+ + N + ++ K F ++L+ + + G+ E
Sbjct: 143 RALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEG 202
Query: 530 GSLTELQYLD-------------LSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT- 575
L+ L + SS++ ++ + L L L++ + +
Sbjct: 203 IEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 262
Query: 576 -----EFEKLIHLSELDLSHNFLQGEIPPQIC-----NMESLEELNLSHNNLFDLIPGCF 625
+ I L L L +N ++ + + M L L L+ N +
Sbjct: 263 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE-DDVV 321
Query: 626 EEMRSL 631
+E+R +
Sbjct: 322 DEIREV 327
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 44.9 bits (104), Expect = 4e-05
Identities = 35/348 (10%), Positives = 88/348 (25%), Gaps = 39/348 (11%)
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL----FGFIPSVIGNLKSLFELDLS 277
SL + ++ + S+ L ++ + L N++ ++ I + K L + S
Sbjct: 9 SLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 278 ENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI 337
+ L L L L E + +
Sbjct: 68 DIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEH-- 125
Query: 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMC 397
L+ G + + I L +
Sbjct: 126 ------LYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 179
Query: 398 ENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
+ + + + + + R ++ L + + + ++
Sbjct: 180 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 239
Query: 458 RNFPKLGTFNASMNNIYGSIPPEIGD------SSKLQVLDLSSNHIVGKIPVQFEKLFSL 511
+++P L + + + D + LQ L L N I + +
Sbjct: 240 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI-- 297
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKL 559
+ +L +L+L+ N+ S + + ++
Sbjct: 298 -----------------DEKMPDLLFLELNGNRF-SEEDDVVDEIREV 327
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 41.4 bits (95), Expect = 4e-04
Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 8/94 (8%)
Query: 509 FSLNKLILNLNQLSG----GVPLEFGSLTELQYLDLSANKLS----SSIPKSMGNLSKLH 560
FS+ L L+ ++ V ++ + LS N + + +++ + L
Sbjct: 3 FSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLE 62
Query: 561 YLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
S+ E L L + L L
Sbjct: 63 IAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLH 96
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.1 bits (89), Expect = 0.002
Identities = 18/133 (13%), Positives = 35/133 (26%), Gaps = 5/133 (3%)
Query: 558 KLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGE----IPPQICNMESLEELNLS 613
L ++ + + + E+ LS N + E + I + + LE S
Sbjct: 9 SLKLDAITTEDE-KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 614 HNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLMEGNKGLCGNFKALPSCD 673
+ E +R L + + +L + AF E L
Sbjct: 68 DIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLY 127
Query: 674 AFMSHEQTSRKKW 686
+
Sbjct: 128 LHNNGLGPQAGAK 140
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.7 bits (88), Expect = 0.003
Identities = 19/128 (14%), Positives = 31/128 (24%), Gaps = 7/128 (5%)
Query: 34 NWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQ 93
L L + + + LS+ G
Sbjct: 206 LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 265
Query: 94 DFSFSSFPHLMYLNLSCNVLYGNIPPQI-----SNLSKLRALDLGNNQLS--GVIPQEIG 146
FS L L L N + + + + L L+L N+ S + EI
Sbjct: 266 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIR 325
Query: 147 HLTCLRML 154
+ R
Sbjct: 326 EVFSTRGR 333
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.3 bits (87), Expect = 0.004
Identities = 46/337 (13%), Positives = 96/337 (28%), Gaps = 32/337 (9%)
Query: 198 NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRG----SIPFSLANLSNLGILYLY 253
+L + S+ V+ +S+ + LS N + + ++A+ +L I
Sbjct: 9 SLKLDAITTEDE-KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 254 KNSLFGFIPSVIGNLKSLFELDLSENQLF---GSIPLSFSNLSSLTLMSLFNNSLSGSIP 310
+ L+ L + L +L S + L ++ +
Sbjct: 68 DIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLY 127
Query: 311 PTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKL 370
L + + + + N LR++ N L++ S
Sbjct: 128 LHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN-----------RLENGSMK 176
Query: 371 ELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVY 430
E + S + H++ + + E+ L + + + +
Sbjct: 177 EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 236
Query: 431 EAFGDHPNLTFLDLSQNNLYGEI------SFNWRNFPKLGTFNASMNNIYGSIPPEIGDS 484
A PNL L L+ L +F+ L T N I +
Sbjct: 237 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTV 296
Query: 485 -----SKLQVLDLSSNHI--VGKIPVQFEKLFSLNKL 514
L L+L+ N + + ++FS
Sbjct: 297 IDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGR 333
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (105), Expect = 6e-06
Identities = 20/143 (13%), Positives = 43/143 (30%), Gaps = 2/143 (1%)
Query: 106 LNLSCNVLYGNIPPQISNLSKLRALDL-GNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGS 164
L + + + + L L + L + +++ L LR L + L
Sbjct: 13 LRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV 71
Query: 165 IPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLS 224
P ++ L L N ++ LS + N +
Sbjct: 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEG 131
Query: 225 ILDLSQNQLRGSIPFSLANLSNL 247
+ + + +L+ LA++ N
Sbjct: 132 LGGVPEQKLQCHGQGPLAHMPNA 154
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (93), Expect = 2e-04
Identities = 18/96 (18%), Positives = 27/96 (28%), Gaps = 2/96 (2%)
Query: 531 SLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEK-LIHLSELDLS 589
L + + + L L + N Q + + L L L +
Sbjct: 6 CPHGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIV 64
Query: 590 HNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCF 625
+ L+ P L LNLS N L L
Sbjct: 65 KSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTV 100
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 39/200 (19%), Positives = 76/200 (38%), Gaps = 16/200 (8%)
Query: 315 NLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCR 374
L + L + + + +L + TL G + + + YL +L+++
Sbjct: 16 ALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSN 71
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFG 434
N L+ + NLTKLV + M N + + P + + N +
Sbjct: 72 NQLTD--ITPLKNLTKLVDILMNNNQIADITPLANLTNLT----GLTLFNNQITDIDPLK 125
Query: 435 DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
+ NL L+LS N + + + + ++ + + + + L+ LD+SS
Sbjct: 126 NLTNLNRLELSSNTISDISALSGLTSL----QQLNFSSNQVTDLKPLANLTTLERLDISS 181
Query: 495 NHIVGKIPVQFEKLFSLNKL 514
N + I V KL +L L
Sbjct: 182 NKVSD-ISV-LAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 4e-05
Identities = 29/190 (15%), Positives = 65/190 (34%), Gaps = 20/190 (10%)
Query: 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446
L + + + + ++ + ++ +L + L+ ++ + K + NLT ++ S
Sbjct: 16 ALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSN 71
Query: 447 NNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE 506
N L N + + + + ++ K
Sbjct: 72 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 131
Query: 507 KLFSLNKLILNLNQLSGGV--------------PLEFGSLTELQYLDLSANKLSSSIPKS 552
+L + I +++ LSG +LT L+ LD+S+NK+S
Sbjct: 132 RLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSD--ISV 189
Query: 553 MGNLSKLHYL 562
+ L+ L L
Sbjct: 190 LAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 16/202 (7%)
Query: 95 FSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRML 154
F+ ++ M L + + ++L ++ L + + + +L L +
Sbjct: 12 FTDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQI 67
Query: 155 YFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP 214
F N L PL+ + ++ + L + +
Sbjct: 68 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLAN------LTNLTGLTLFNNQITDI 121
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
+ + NL +L+ L+LS N + S L++L L N + P + NL +L L
Sbjct: 122 DPLKNLTNLNRLELSSNTISDISALS--GLTSLQQLNFSSNQVTDLKP--LANLTTLERL 177
Query: 275 DLSENQLFGSIPLSFSNLSSLT 296
D+S N++ S + L++L
Sbjct: 178 DISSNKV--SDISVLAKLTNLE 197
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.7 bits (86), Expect = 0.004
Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 16/200 (8%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
L L + + ++ S +L + L + + + L +L +++ S
Sbjct: 16 ALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSN 71
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
NQL PL ++ + L + A + + I
Sbjct: 72 NQLTDITPLKN--------LTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDP 123
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398
+ L + + + L SL +L N ++ + P + NLT L +++
Sbjct: 124 LKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISS 181
Query: 399 NHLFGLIPKSFRNLTSLERL 418
N + + LT+LE L
Sbjct: 182 NKVSDI--SVLAKLTNLESL 199
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 40.1 bits (92), Expect = 5e-04
Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 24/176 (13%)
Query: 106 LNLSCNVLYGNIPP------QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVN 159
L+G IPP +S L + L L N + + + + LR+L N
Sbjct: 23 TEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI--SSLSGMENLRILSLGRN 80
Query: 160 HLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGN 219
+ L+ +L + + S L NL L + + +
Sbjct: 81 LIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITN--WGEIDKLAA 138
Query: 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
L+ L L L+ N L + N+ + V+ L +L +LD
Sbjct: 139 LDKLEDLLLAGNPLYNDYKEN--------------NATSEYRIEVVKRLPNLKKLD 180
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1031 | |||
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.98 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.96 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.96 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.94 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.94 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.89 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.89 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.85 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.83 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.82 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.77 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.75 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.75 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.74 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.74 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.74 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.73 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.73 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.73 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.71 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.68 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.53 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.52 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.52 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.52 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.5 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.5 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.45 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.43 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.4 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.4 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.26 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.23 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.61 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.55 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.38 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.87 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.61 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.6 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.16 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.96 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.76 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.71 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.26 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.12 |
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-48 Score=413.32 Aligned_cols=249 Identities=28% Similarity=0.439 Sum_probs=209.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|+. .+++.||||++.+.... +....+.+.+|++++++++|||||++++++.+++..|+
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i 83 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 83 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHcc-ChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEE
Confidence 36899999999999999999965 57899999999765432 33457789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ |||||||||+||+++.++.+||+|||+|+...
T Consensus 84 vmEy~~~g~L~~~l~~~~---~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~ 157 (263)
T d2j4za1 84 ILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 157 (263)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCC
T ss_pred EEeecCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecC
Confidence 999999999999997643 589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......||+.|||||++.+..++.++||||+||++|||++|+.||+..... .. ...+... ...++..
T Consensus 158 ~--~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~---~~~i~~~-~~~~p~~--- 226 (263)
T d2j4za1 158 S--SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ET---YKRISRV-EFTFPDF--- 226 (263)
T ss_dssp C--CCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HH---HHHHHTT-CCCCCTT---
T ss_pred C--CcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH--HH---HHHHHcC-CCCCCcc---
Confidence 3 2345678999999999999999999999999999999999999998654321 11 1111111 1122211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...++.+++.+||++||++|||++|+++
T Consensus 227 ---~s~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 227 ---VTEGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 1235778899999999999999999986
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-48 Score=416.29 Aligned_cols=252 Identities=24% Similarity=0.350 Sum_probs=204.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+|+.||||++..... ....+.+.+|++++++++|||||++++++.+++..|+
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~i 80 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 80 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc---chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEE
Confidence 36899999999999999999965 5799999999976432 2234678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|+...
T Consensus 81 vmEy~~gg~L~~~l~~~~---~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~ 154 (271)
T d1nvra_ 81 FLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 154 (271)
T ss_dssp EEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEeccCCCcHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeec
Confidence 999999999999997643 589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCC--CCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 917 PHS--SNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 917 ~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
... ......+||+.|||||++.+..+ +.++||||+||++|||+||+.||.........+..... . ......
T Consensus 155 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~----~--~~~~~~ 228 (271)
T d1nvra_ 155 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE----K--KTYLNP 228 (271)
T ss_dssp ETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHT----T--CTTSTT
T ss_pred cCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhc----C--CCCCCc
Confidence 322 22455789999999999988776 67899999999999999999998765543222221111 1 111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... ...++.+++.+||+.||++|||++|+++
T Consensus 229 ~~~---~s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 229 WKK---IDSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp GGG---SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccc---CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111 1235678899999999999999999975
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-48 Score=419.71 Aligned_cols=249 Identities=26% Similarity=0.397 Sum_probs=208.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 95 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEeccc----ChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEE
Confidence 4699999999999999999964 579999999987543 23467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++... .+++.++..++.||+.||+|||++ |||||||||+||+++.++++||+|||+|+.+..
T Consensus 96 mEy~~gg~L~~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~ 168 (293)
T d1yhwa1 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (293)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEecCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecc
Confidence 9999999999988653 488999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
........+||+.|+|||++.++.++.++||||+||++|||+||+.||....... ..........+.+.. +.
T Consensus 169 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-----~~~~~~~~~~~~~~~-~~-- 240 (293)
T d1yhwa1 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-----ALYLIATNGTPELQN-PE-- 240 (293)
T ss_dssp TTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHHCSCCCSS-GG--
T ss_pred ccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH-----HHHHHHhCCCCCCCC-cc--
Confidence 5555567789999999999999999999999999999999999999986543311 111111111111111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.||++|||++|+++
T Consensus 241 -~~s~~~~~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 241 -KLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp -GSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11235778999999999999999999875
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-48 Score=416.28 Aligned_cols=256 Identities=25% Similarity=0.380 Sum_probs=196.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--CCeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--AQHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~~~~ 835 (1031)
++|++.+.||+|+||+||+|+. .+|+.||||++...... ....+.+.+|++++++++|||||++++++.+ ++.+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC--HHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC--HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEE
Confidence 6799999999999999999955 57999999999775432 2346789999999999999999999999865 46689
Q ss_pred EEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCC--CCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 836 IVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDC--LPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
+||||+++|+|.+++.... ....+++.+++.++.||+.||+|||++. ..+|+||||||+||+++.++.+||+|||+|
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a 161 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 161 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence 9999999999999997542 2346899999999999999999999871 013999999999999999999999999999
Q ss_pred cccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 913 KFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 913 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
+.............||+.|||||++.+..++.++||||+||++|||+||+.||...... .....+.......++.
T Consensus 162 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~-----~~~~~i~~~~~~~~~~ 236 (269)
T d2java1 162 RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-----ELAGKIREGKFRRIPY 236 (269)
T ss_dssp HHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHTCCCCCCT
T ss_pred eecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH-----HHHHHHHcCCCCCCCc
Confidence 98765544556678999999999999999999999999999999999999998754331 1222222222222222
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ...++.+++.+||+.||++|||++|+++
T Consensus 237 ~------~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 237 R------YSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp T------SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c------cCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1 1235778899999999999999999975
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-48 Score=414.93 Aligned_cols=252 Identities=23% Similarity=0.405 Sum_probs=199.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|+..+.||+|+||+||+|++.+++.||||+++... ...++|.+|++++++++|||||+++|++.+++..++||
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~ 79 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 79 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-----CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEE
Confidence 4688899999999999999998889999999997643 34578999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... ..+++..+..++.|||+||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 E~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~ 154 (263)
T d1sm2a_ 80 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 154 (263)
T ss_dssp ECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC--------
T ss_pred EecCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCC
Confidence 9999999999987643 3578999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHhC-CCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG-NHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......||+.|+|||++.++.++.++|||||||++|||+|+ +.||+.... .. ....+........+...
T Consensus 155 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~--~~---~~~~i~~~~~~~~p~~~-- 227 (263)
T d1sm2a_ 155 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SE---VVEDISTGFRLYKPRLA-- 227 (263)
T ss_dssp ----------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH--HH---HHHHHHHTCCCCCCTTS--
T ss_pred CceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH--HH---HHHHHHhcCCCCCcccc--
Confidence 32 23346789999999999999999999999999999999995 555443221 11 22222222222222211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..++.+++.+||+.||++|||++||++.|++
T Consensus 228 ----~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 258 (263)
T d1sm2a_ 228 ----STHVYQIMNHCWKERPEDRPAFSRLLRQLAE 258 (263)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 2357789999999999999999999999874
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-48 Score=414.79 Aligned_cols=257 Identities=24% Similarity=0.380 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||+||+|+.. ..||||+++.... .....+.|.+|++++++++|||||++++++.+ +..++||
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~ 82 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVT 82 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSC--CTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEE
Confidence 57889999999999999999863 3699999976532 23457889999999999999999999998755 5689999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... ..+++.++..++.|||+||+|||++ +||||||||+||+++.++.+||+|||+|+.....
T Consensus 83 Ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 83 QWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp ECCCEEEHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC----
T ss_pred ecCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeecccc
Confidence 9999999999997543 3589999999999999999999999 9999999999999999999999999999876543
Q ss_pred C--CCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 919 S--SNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 919 ~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
. .......||+.|||||++.+ +.++.++|||||||++|||+||+.||+....... ....+.. ....+.....
T Consensus 158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~-~~~~~~~--~~~~p~~~~~ 234 (276)
T d1uwha_ 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIFMVGR--GYLSPDLSKV 234 (276)
T ss_dssp --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHH--TSCCCCGGGS
T ss_pred CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH-HHHHHhc--CCCCCcchhc
Confidence 2 23345679999999999864 3578999999999999999999999876543211 1111111 1111111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. +...++.+++.+||+.||++|||++||++.|++
T Consensus 235 ~~---~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~ 269 (276)
T d1uwha_ 235 RS---NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269 (276)
T ss_dssp CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cc---cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 11 122367789999999999999999999999863
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.1e-47 Score=415.13 Aligned_cols=254 Identities=26% Similarity=0.475 Sum_probs=195.8
Q ss_pred hccCccceeecCCCccEEEEEeC-CC---cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||+||+|+.. ++ ..||||++..... ....+.|.+|++++++++|||||+++|++.+++..
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~ 102 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT---EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV 102 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccC---HHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 45667789999999999999664 33 3689998865432 23467899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++|+|.+++.... ..+++.++..++.|||+||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 103 ~iv~Ey~~~g~L~~~~~~~~--~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~ 177 (299)
T d1jpaa_ 103 MIITEFMENGSLDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRF 177 (299)
T ss_dssp EEEEECCTTEEHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEEecCCCcceeeecccc--CCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceE
Confidence 99999999999999887643 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC-----ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 915 LNPHSSN-----WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 915 ~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
....... .....+|+.|||||++.++.++.++|||||||++|||+| |+.||...... .....+......
T Consensus 178 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~-----~~~~~i~~~~~~ 252 (299)
T d1jpaa_ 178 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-----DVINAIEQDYRL 252 (299)
T ss_dssp ------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCC
T ss_pred ccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCC
Confidence 6543221 123457899999999999999999999999999999998 89998654431 112222222111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..+. . ...++.+++.+||+.||++|||++||++.|++
T Consensus 253 ~~~~---~---~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~ 289 (299)
T d1jpaa_ 253 PPPM---D---CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 289 (299)
T ss_dssp CCCT---T---CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCc---c---chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 1111 1 22357789999999999999999999998863
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-47 Score=412.34 Aligned_cols=252 Identities=22% Similarity=0.390 Sum_probs=205.9
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||+||+|.+.+++.||||+++... ...+.|.+|++++++++|||||+++|++.+ +..++||
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~ 86 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-----CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence 5788999999999999999998888999999997543 346789999999999999999999998865 5679999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... ...+++.++.+++.||++||+|||++ +|+||||||+||+++.++.+||+|||+|+.....
T Consensus 87 Ey~~~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~ 162 (272)
T d1qpca_ 87 EYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (272)
T ss_dssp ECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EeCCCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCC
Confidence 9999999999886543 24589999999999999999999999 9999999999999999999999999999987543
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.. ......||+.|+|||++.++.++.++|||||||++|||+||+.|+...... ......+........+..
T Consensus 163 ~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~----~~~~~~i~~~~~~~~p~~---- 234 (272)
T d1qpca_ 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN----PEVIQNLERGYRMVRPDN---- 234 (272)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHHTTCCCCCCTT----
T ss_pred ccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH----HHHHHHHHhcCCCCCccc----
Confidence 22 234457899999999999989999999999999999999976654322221 112222222222222221
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...++.+++.+||+.||++|||++||++.|+
T Consensus 235 --~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~ 265 (272)
T d1qpca_ 235 --CPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (272)
T ss_dssp --CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --ChHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 1235778999999999999999999999886
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.8e-47 Score=414.41 Aligned_cols=253 Identities=22% Similarity=0.397 Sum_probs=208.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.+ .+++.||||+++... ...++|.+|++++++++|||||+++++|.+++..++|
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-----chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEE
Confidence 6789999999999999999965 468999999987543 3567899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... ...+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 92 ~E~~~~g~l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 92 TEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 167 (287)
T ss_dssp EECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCS
T ss_pred eecccCcchHHHhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCC
Confidence 99999999999997643 34689999999999999999999999 999999999999999999999999999997654
Q ss_pred CCCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.... .....|++.|+|||++.++.++.++|||||||++|||++|+.||..... ... ....+........+..
T Consensus 168 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~-~~~---~~~~i~~~~~~~~~~~--- 240 (287)
T d1opja_ 168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQ---VYELLEKDYRMERPEG--- 240 (287)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHH---HHHHHHTTCCCCCCTT---
T ss_pred CCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch-HHH---HHHHHhcCCCCCCCcc---
Confidence 3322 2345678999999999999999999999999999999997777532222 111 1122222222222221
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...++.+++.+||+.||++|||++||++.|+
T Consensus 241 ---~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~ 271 (287)
T d1opja_ 241 ---CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271 (287)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---chHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1235778999999999999999999999876
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-47 Score=401.65 Aligned_cols=251 Identities=23% Similarity=0.423 Sum_probs=211.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|+..++||+|+||+||+|+.++++.||||+++... ...++|.+|++++++++||||++++|+|.+++..++||
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-----~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~ 78 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-----MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 78 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-----SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-----CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Confidence 5789999999999999999998889999999987643 24568999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|++.+++.... ..+++..+++++.||++||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 79 Ey~~~g~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 153 (258)
T d1k2pa_ 79 EYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153 (258)
T ss_dssp ECCTTEEHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSS
T ss_pred EccCCCcHHHhhhccc--cCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCC
Confidence 9999999999976543 3578899999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......+|+.|+|||.+.++.++.++|||||||++|||+| |+.||+..... ... ..+........+..
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~--~~~---~~i~~~~~~~~p~~--- 225 (258)
T d1k2pa_ 154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETA---EHIAQGLRLYRPHL--- 225 (258)
T ss_dssp SCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHH---HHHHTTCCCCCCTT---
T ss_pred CceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH--HHH---HHHHhCCCCCCccc---
Confidence 32 2345678999999999999999999999999999999998 89998755432 122 22222222222211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...++.+++.+||+.||++|||++||++.|.
T Consensus 226 ---~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 256 (258)
T d1k2pa_ 226 ---ASEKVYTIMYSCWHEKADERPTFKILLSNIL 256 (258)
T ss_dssp ---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ---ccHHHHHHHHHHccCCHhHCcCHHHHHHHhh
Confidence 1236789999999999999999999999885
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-48 Score=416.69 Aligned_cols=251 Identities=22% Similarity=0.331 Sum_probs=204.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|++.+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|++++++++|||||++++++.+++..++|
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~----~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lv 87 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS----EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWIL 87 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS----SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEE
Confidence 4588999999999999999965 579999999987643 23456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... ..+++.++..++.||+.||+|||++ ||+||||||+||+++.++++||+|||+|+....
T Consensus 88 mEy~~~g~L~~~~~~~~--~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~ 162 (288)
T d2jfla1 88 IEFCAGGAVDAVMLELE--RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 162 (288)
T ss_dssp EECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHH
T ss_pred EecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCC
Confidence 99999999999976532 3589999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.........||+.|+|||++. +..++.++||||+||++|||+||+.||....... ....+.....+....
T Consensus 163 ~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~-----~~~~i~~~~~~~~~~ 237 (288)
T d2jfla1 163 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR-----VLLKIAKSEPPTLAQ 237 (288)
T ss_dssp HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-----HHHHHHHSCCCCCSS
T ss_pred CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH-----HHHHHHcCCCCCCCc
Confidence 222334567999999999984 4567899999999999999999999987554321 112222222222211
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+ . ....++.+++.+||+.||++|||++|+++
T Consensus 238 ~-~---~~s~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 238 P-S---RWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp G-G---GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c-c---cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 1 12236788999999999999999999975
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-47 Score=419.20 Aligned_cols=254 Identities=25% Similarity=0.357 Sum_probs=204.5
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.++||+|+||+||+|+. .+|+.||+|+++... .....+.+.+|+.++++++|||||+++++|.+++..|+
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~i 81 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 81 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC---CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 36899999999999999999965 579999999987643 22346788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+ + ||+||||||+||+++.++++||+|||+|+..
T Consensus 82 VmEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~ 155 (322)
T d1s9ja_ 82 CMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155 (322)
T ss_dssp EEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred EEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeCCCcccc
Confidence 999999999999997643 58999999999999999999996 5 8999999999999999999999999999876
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH----------------
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI---------------- 979 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~---------------- 979 (1031)
... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||..............
T Consensus 156 ~~~--~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (322)
T d1s9ja_ 156 IDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233 (322)
T ss_dssp HHH--TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------
T ss_pred CCC--ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccc
Confidence 432 23457899999999999999999999999999999999999999865443211100000
Q ss_pred ---------------------HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 980 ---------------------TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 980 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......++..+ .. ....++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLP---SG--VFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp ------------CCCCHHHHHHHHHTSCCCCCC---BT--TBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccccchhHHHHHhhhhccCCccCc---cc--cCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 000000000000 00 01235788999999999999999999976
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-47 Score=409.37 Aligned_cols=249 Identities=20% Similarity=0.296 Sum_probs=204.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++.+.... +....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHcc-CHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence 5799999999999999999965 57999999999765432 234567899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +||||||||+||+++.++.+||+|||+|+.+..
T Consensus 87 mEy~~gg~L~~~~~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~ 160 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 160 (288)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEccCCCCHHHhhhccC---CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceeccc
Confidence 99999999999987643 589999999999999999999999 999999999999999999999999999997754
Q ss_pred CCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ......||+.|+|||++.+..++.++||||+||++|||+||+.||..... .... ..+... ...++..
T Consensus 161 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~~~~---~~i~~~-~~~~p~~-- 232 (288)
T d1uu3a_ 161 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--YLIF---QKIIKL-EYDFPEK-- 232 (288)
T ss_dssp ---------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHTT-CCCCCTT--
T ss_pred CCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH--HHHH---HHHHcC-CCCCCcc--
Confidence 322 23456799999999999999999999999999999999999999875432 1111 111111 1122211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVC 1026 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 1026 (1031)
...++.++|.+||+.||++|||++|+.
T Consensus 233 ----~s~~~~~li~~~L~~dP~~R~t~~e~~ 259 (288)
T d1uu3a_ 233 ----FFPKARDLVEKLLVLDATKRLGCEEME 259 (288)
T ss_dssp ----CCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred ----CCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence 123577899999999999999999864
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-46 Score=402.17 Aligned_cols=246 Identities=21% Similarity=0.317 Sum_probs=197.5
Q ss_pred CccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----CCeeEE
Q 043316 762 GEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----AQHSFI 836 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~~~l 836 (1031)
+..++||+|+||+||+|.. .+++.||+|++...... ....+.+.+|++++++++|||||++++++.+ +..+|+
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i 89 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 89 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence 4566899999999999965 57899999998765432 2346789999999999999999999999865 456899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeC-CCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLD-SEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~ 913 (1031)
||||+++|+|.+++.... .+++.++..++.||++||+|||++ + |+||||||+||+++ +++.+||+|||+|+
T Consensus 90 vmE~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~ 163 (270)
T d1t4ha_ 90 VTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 163 (270)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEeCCCCCcHHHHHhccc---cccHHHHHHHHHHHHHHHHHHHHC---CCCEEeCCcChhhceeeCCCCCEEEeecCcce
Confidence 999999999999997643 588999999999999999999998 6 99999999999997 57899999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.... ......+||+.|||||++.+ .++.++||||+||++|||++|+.||........ ....+.....+.
T Consensus 164 ~~~~--~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~----~~~~i~~~~~~~---- 232 (270)
T d1t4ha_ 164 LKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ----IYRRVTSGVKPA---- 232 (270)
T ss_dssp GCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH----HHHHHTTTCCCG----
T ss_pred eccC--CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH----HHHHHHcCCCCc----
Confidence 6432 33456789999999999876 699999999999999999999999865443211 111111111110
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........++.+++.+||++||++|||++|+++
T Consensus 233 -~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 233 -SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp -GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence 001111235778999999999999999999986
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-46 Score=404.56 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=204.5
Q ss_pred hccCccce-eecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYC-IGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~-lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|.+.+. ||+|+||+||+|.+. ++..||||+++... .....+.|.+|++++++++|||||+++|++.++ ..
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-~~ 83 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-AL 83 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc---CHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-eE
Confidence 45666664 999999999999653 45689999997643 234567899999999999999999999999764 57
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||+++|+|.+++.... ..+++.++..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+|+.
T Consensus 84 ~lvmE~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~ 158 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 158 (285)
T ss_dssp EEEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhc
Confidence 99999999999999986543 3689999999999999999999999 999999999999999999999999999997
Q ss_pred cCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
+...... .....||+.|+|||++.++.++.++|||||||++|||+| |+.||...... .. ...+........
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~---~~~i~~~~~~~~ 233 (285)
T d1u59a_ 159 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EV---MAFIEQGKRMEC 233 (285)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HH---HHHHHTTCCCCC
T ss_pred ccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HH---HHHHHcCCCCCC
Confidence 7543321 234568899999999999999999999999999999998 99998755431 22 222222222222
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. ...++.+++.+||+.||++|||+.+|.+.|+
T Consensus 234 p~~------~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~ 267 (285)
T d1u59a_ 234 PPE------CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267 (285)
T ss_dssp CTT------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCc------CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 221 1235778999999999999999999999875
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-46 Score=411.25 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=189.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|++.+.||+|+||+||+|+. .+++.||||++.+.... ...+.+.+|+.++++++|||||++++++.+++..|+|
T Consensus 9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 85 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE---GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI 85 (307)
T ss_dssp GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-------------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 5699999999999999999965 57999999999765432 2345688999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---CCCceEEeccccccc
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD---SEHEAHVSDFGIAKF 914 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~ 914 (1031)
|||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||+|+.
T Consensus 86 mE~~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~ 159 (307)
T d1a06a_ 86 MQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 159 (307)
T ss_dssp ECCCCSCBHHHHHHTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred EeccCCCcHHHhhhccc---CCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEE
Confidence 99999999999997643 589999999999999999999999 999999999999995 578999999999987
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... ......+||+.|||||++.+..++.++||||+||++|||++|+.||...... ... ..+..... ..+..
T Consensus 160 ~~~~-~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~---~~i~~~~~-~~~~~- 231 (307)
T d1a06a_ 160 EDPG-SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--KLF---EQILKAEY-EFDSP- 231 (307)
T ss_dssp --------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHH---HHHHTTCC-CCCTT-
T ss_pred ccCC-CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--HHH---HHHhccCC-CCCCc-
Confidence 6533 2345578999999999999999999999999999999999999998654321 111 11111111 11110
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+....+.+++.+||+.||++|||++|+++
T Consensus 232 -~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 232 -YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp -TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -cccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 01112235778999999999999999999987
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-46 Score=400.69 Aligned_cols=246 Identities=25% Similarity=0.361 Sum_probs=197.0
Q ss_pred ceeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEec
Q 043316 765 YCIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
++||+|+||+||+|.+. +++.||||+++.... +....+.|.+|++++++++|||||+++|+|.++ ..++||||+
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC--CHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcC
Confidence 47999999999999643 357899999976432 234467899999999999999999999999754 568999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCC
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 921 (1031)
++|+|.++++... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+........
T Consensus 90 ~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~ 163 (277)
T d1xbba_ 90 ELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163 (277)
T ss_dssp TTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccccccc
Confidence 9999999998653 489999999999999999999999 9999999999999999999999999999876543322
Q ss_pred ---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 922 ---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 922 ---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.....||+.|+|||++.+..++.++|||||||++|||+| |+.||...... . ....+........+..
T Consensus 164 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~--~---~~~~i~~~~~~~~p~~---- 234 (277)
T d1xbba_ 164 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--E---VTAMLEKGERMGCPAG---- 234 (277)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--H---HHHHHHTTCCCCCCTT----
T ss_pred cccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCcc----
Confidence 234568999999999999999999999999999999998 89998754431 1 1222222222222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...++.+++.+||+.||++|||++||.+.|+
T Consensus 235 --~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~ 265 (277)
T d1xbba_ 235 --CPREMYDLMNLCWTYDVENRPGFAAVELRLR 265 (277)
T ss_dssp --CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred --cCHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 1235778999999999999999999998875
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-46 Score=404.40 Aligned_cols=254 Identities=26% Similarity=0.451 Sum_probs=198.3
Q ss_pred hccCccceeecCCCccEEEEEeCCC-----cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSG-----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
+.|+..++||+|+||+||+|.+... ..||||+++.... ....+.|.+|++++++++|||||+++|++.+.+.
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~ 83 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT---EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 83 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC---hHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCc
Confidence 4578889999999999999965432 4799999865432 2345679999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||++++++.+++.... ..+++.++..++.||+.|++|||++ +|+||||||+|||++.++.+||+|||+|+
T Consensus 84 ~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~ 158 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 158 (283)
T ss_dssp EEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred eEEEEEecccCcchhhhhccc--ccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhh
Confidence 999999999999999887543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... ......||+.|+|||++.++.++.++|||||||++|||++|+.|+...... . .....+........
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-~---~~~~~i~~~~~~~~ 234 (283)
T d1mqba_ 159 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-H---EVMKAINDGFRLPT 234 (283)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-H---HHHHHHHTTCCCCC
T ss_pred cccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-H---HHHHHHhccCCCCC
Confidence 7654322 123456899999999999999999999999999999999976664332221 1 12222222222222
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+. . ....+.+++.+||+.||++|||++||++.|+
T Consensus 235 ~~---~---~~~~l~~li~~cl~~~p~~RPt~~eil~~L~ 268 (283)
T d1mqba_ 235 PM---D---CPSAIYQLMMQCWQQERARRPKFADIVSILD 268 (283)
T ss_dssp CT---T---CBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred ch---h---hHHHHHHHHHHHCcCCHhHCcCHHHHHHHHH
Confidence 21 1 1235778999999999999999999999886
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-46 Score=413.80 Aligned_cols=256 Identities=22% Similarity=0.366 Sum_probs=205.0
Q ss_pred hccCccceeecCCCccEEEEEeCC-C-----cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS-G-----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~ 831 (1031)
++|++.++||+|+||+||+|+... + ..||||++.... .......+.+|+.++.++ +|||||++++++.+.
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~ 113 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 113 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc---CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC
Confidence 679999999999999999996532 2 379999986643 223456789999999998 899999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc--------------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCC
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA--------------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDI 891 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 891 (1031)
+..++||||+++|+|.++++.... ...+++.+++.++.||++||+|||++ +||||||
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDl 190 (325)
T d1rjba_ 114 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 190 (325)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccC
Confidence 999999999999999999975431 13478999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCc
Q 043316 892 SSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYV 968 (1031)
Q Consensus 892 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~ 968 (1031)
||+||+++.++.+||+|||+|+........ .....||+.|||||++.++.++.++|||||||++|||+| |+.||...
T Consensus 191 Kp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~ 270 (325)
T d1rjba_ 191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 270 (325)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred chhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876544332 234568999999999999999999999999999999998 89998755
Q ss_pred CccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 969 STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.... .+...+ ........+.. ...++.+++.+||+.||++|||++||++.|.
T Consensus 271 ~~~~-~~~~~~---~~~~~~~~p~~------~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 271 PVDA-NFYKLI---QNGFKMDQPFY------ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp CCSH-HHHHHH---HTTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHH-HHHHHH---hcCCCCCCCCc------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 4321 111111 12222222221 1236788999999999999999999999985
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-45 Score=407.49 Aligned_cols=251 Identities=23% Similarity=0.301 Sum_probs=211.4
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||++++..... ....+.+.+|+.++++++||||+++++++.+++.+|+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~-~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~i 82 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC-HHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccc
Confidence 46899999999999999999965 679999999998765332 3457889999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+|+...
T Consensus 83 v~ey~~gg~L~~~~~~~~---~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~ 156 (337)
T d1o6la_ 83 VMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred ceeccCCCchhhhhhccc---CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccc
Confidence 999999999999998754 478899999999999999999999 99999999999999999999999999999775
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..... .+... ...++..
T Consensus 157 ~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~--~~~~~---~i~~~-~~~~p~~--- 227 (337)
T d1o6la_ 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFE---LILME-EIRFPRT--- 227 (337)
T ss_dssp CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHHHC-CCCCCTT---
T ss_pred cCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH--HHHHH---HHhcC-CCCCCcc---
Confidence 555556678899999999999999999999999999999999999999875443 11111 11111 1222221
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
. ..++.++|.+||++||++||+ ++|+++
T Consensus 228 ~---s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 228 L---SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp S---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C---CHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence 1 235678999999999999995 788765
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.4e-46 Score=408.99 Aligned_cols=248 Identities=25% Similarity=0.352 Sum_probs=202.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|+..+.||+|+||+||+|+. .+++.||||++...... +....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 93 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSC-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhcc-CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence 3589999999999999999964 57899999999765422 233467799999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|++..++... ..+++.+++.++.||+.||+|||++ |||||||||+|||++.++.+||+|||+|.....
T Consensus 94 ~E~~~~g~l~~~~~~~---~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (309)
T d1u5ra_ 94 MEYCLGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (309)
T ss_dssp EECCSEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EEecCCCchHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence 9999999998776554 3589999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.....||+.|||||++.+ +.|+.++||||+||++|||++|+.||...... .....+.....+....
T Consensus 168 ----~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~~-- 236 (309)
T d1u5ra_ 168 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHIAQNESPALQS-- 236 (309)
T ss_dssp ----BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCSC--
T ss_pred ----CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHhCCCCCCCC--
Confidence 234679999999999864 45889999999999999999999998644321 1112222222222111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 237 ~~---~s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 237 GH---WSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC---CCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 11 1235778999999999999999999875
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-46 Score=404.06 Aligned_cols=254 Identities=21% Similarity=0.314 Sum_probs=208.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh--hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD--EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
++|++.+.||+|+||+||+|+. .+|+.||||++++..... .....+.+.+|++++++++|||||++++++.+++..|
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 5699999999999999999965 579999999997654322 2234688999999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~ 911 (1031)
+||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++ .+|++|||+
T Consensus 90 iv~E~~~gg~L~~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~ 163 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163 (293)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEcCCCccccchhcccc---ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhh
Confidence 9999999999999997643 589999999999999999999999 999999999999999877 499999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
|...... .......||+.|+|||++.+..++.++||||+||++|||+||+.||...... .. ...+.. ....
T Consensus 164 a~~~~~~-~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~---~~~i~~---~~~~ 234 (293)
T d1jksa_ 164 AHKIDFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ET---LANVSA---VNYE 234 (293)
T ss_dssp CEECTTS-CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH---HHHHHT---TCCC
T ss_pred hhhcCCC-ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH--HH---HHHHHh---cCCC
Confidence 9877533 3345567899999999999989999999999999999999999998754321 11 111111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111111122346788999999999999999999986
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=7.5e-46 Score=412.07 Aligned_cols=252 Identities=19% Similarity=0.328 Sum_probs=207.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|+. .+|+.||||++.... ..+.+.+.+|+.++++++|||||++++++.+++..|+
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~----~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 100 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEE
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc----hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 46899999999999999999965 579999999997643 2346788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC--CCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS--EHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~ 914 (1031)
||||+++|+|.+++.... ..+++.++..++.||+.||+|||++ |||||||||+||+++. ++.+||+|||+|+.
T Consensus 101 vmE~~~gg~L~~~l~~~~--~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~ 175 (350)
T d1koaa2 101 IYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 175 (350)
T ss_dssp EECCCCSCBHHHHHTCTT--SCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEcCCCCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchhee
Confidence 999999999999986542 3589999999999999999999999 9999999999999964 57899999999998
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
+... .......||+.|||||++.+..++.++||||+||++|||+||+.||..... ..... .+.... ...+ .
T Consensus 176 ~~~~-~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~---~i~~~~-~~~~--~ 246 (350)
T d1koaa2 176 LDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLR---NVKSCD-WNMD--D 246 (350)
T ss_dssp CCTT-SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHHHTC-CCSC--C
T ss_pred cccc-cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH--HHHHH---HHHhCC-CCCC--c
Confidence 7543 334567899999999999999999999999999999999999999864432 11111 111111 1111 1
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 279 (350)
T d1koaa2 247 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 279 (350)
T ss_dssp GGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111112236778999999999999999999986
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-46 Score=402.33 Aligned_cols=253 Identities=23% Similarity=0.397 Sum_probs=201.3
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||+||+|...+++.||||+++... ...+.|.+|+.++++++|||||+++|++.+ +..++||
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-----~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~ 90 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 90 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-----CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEE
Confidence 6799999999999999999988888899999997543 346789999999999999999999999865 5679999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|++.+++.... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++++||+|||+|+.....
T Consensus 91 Ey~~~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~ 166 (285)
T d1fmka3 91 EYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 166 (285)
T ss_dssp CCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred EecCCCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCC
Confidence 9999999999887643 24589999999999999999999999 9999999999999999999999999999876433
Q ss_pred C-CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 919 S-SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 919 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .......||+.|+|||++.++.++.++|||||||++|||+||+.|+...... . .....+........+..
T Consensus 167 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-~---~~~~~i~~~~~~~~~~~---- 238 (285)
T d1fmka3 167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-R---EVLDQVERGYRMPCPPE---- 238 (285)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-H---HHHHHHHTTCCCCCCTT----
T ss_pred CceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-H---HHHHHHHhcCCCCCCcc----
Confidence 2 2334567899999999999999999999999999999999977664333221 1 11222222222222221
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...++.+++.+||+.||++|||+++|+++|++
T Consensus 239 --~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 270 (285)
T d1fmka3 239 --CPESLHDLMCQCWRKEPEERPTFEYLQAFLED 270 (285)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred --cCHHHHHHHHHHcccCHhHCcCHHHHHHHHhh
Confidence 12357789999999999999999999998863
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=1.2e-45 Score=410.65 Aligned_cols=251 Identities=21% Similarity=0.289 Sum_probs=207.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.. .+|+.||||+++... ..+.+.+.+|+.++++++|||||++++++.+++.+|+|
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 104 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 104 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 5799999999999999999964 679999999987643 23456788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC--CCCceEEecccccccc
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD--SEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~Dfg~a~~~ 915 (1031)
|||+++|+|.+++.... ..+++.+++.++.||+.||+|||++ |||||||||+|||++ .++.+||+|||+|+.+
T Consensus 105 mE~~~gg~L~~~~~~~~--~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~ 179 (352)
T d1koba_ 105 LEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 179 (352)
T ss_dssp EECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCChHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceec
Confidence 99999999998876543 3589999999999999999999999 999999999999998 5789999999999987
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... .......||+.|+|||++.+..++.++||||+||++|||+||+.||...... .....+.......+....
T Consensus 180 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~~~~~~~~~~---- 252 (352)
T d1koba_ 180 NPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQNVKRCDWEFDEDAF---- 252 (352)
T ss_dssp CTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHCCCCCCSSTT----
T ss_pred CCC-CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCCCcccc----
Confidence 643 3345678999999999999999999999999999999999999998654331 111111111111111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....++.+++.+||+.||++|||++|+++
T Consensus 253 --~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 253 --SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred --cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112235778999999999999999999976
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-45 Score=392.79 Aligned_cols=248 Identities=26% Similarity=0.417 Sum_probs=198.0
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-CCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN-AQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-~~~~~lv 837 (1031)
++|+..++||+|+||.||+|+. .|+.||||+++... ..+.|.+|++++++++||||++++|++.+ .+.+++|
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv 79 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 79 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH------HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEE
Confidence 5788999999999999999988 58899999997542 45779999999999999999999999855 4678999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... ...+++..+++++.||+.||+|||+. +|+||||||+||+++.++.+|++|||+++....
T Consensus 80 ~ey~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 80 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 155 (262)
T ss_dssp ECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCC
Confidence 99999999999997543 23589999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .....++..|+|||++.++.+++++|||||||++|||+| |+.||+..... +....+.....+..+...
T Consensus 156 ~---~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~-- 225 (262)
T d1byga_ 156 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDGC-- 225 (262)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHTTTCCCCCCTTC--
T ss_pred C---CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHcCCCCCCCccC--
Confidence 2 234567899999999999999999999999999999998 67776654331 222333333333333221
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..++.+++.+||+.||++|||++|++++|++
T Consensus 226 ----~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~ 256 (262)
T d1byga_ 226 ----PPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 256 (262)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 1367789999999999999999999999863
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=3.3e-45 Score=404.88 Aligned_cols=296 Identities=34% Similarity=0.529 Sum_probs=262.1
Q ss_pred CCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCC--ccceeEeCCC---CCEEEEEecCCccccc--cCCc
Q 043316 23 SDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPC--TWFGIFCNLV---GRVISISLSSLGLNGT--FQDF 95 (1031)
Q Consensus 23 ~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C--~w~gv~c~~~---~~v~~l~l~~~~l~g~--~~~~ 95 (1031)
-|.|+|++|||+||+++. +| ..++||. .++||| .|+||+|+.. +||+.|+|++++++|. +|+
T Consensus 2 ~c~~~e~~aLl~~k~~~~--~~--~~l~sW~------~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~- 70 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLG--NP--TTLSSWL------PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS- 70 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT--CC--GGGTTCC------TTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-
T ss_pred CCCHHHHHHHHHHHHHCC--CC--CcCCCCC------CCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCCh-
Confidence 499999999999999998 44 4699997 678999 4999999864 4899999999999985 444
Q ss_pred cccCCCcccEEecCC-CcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCccc
Q 043316 96 SFSSFPHLMYLNLSC-NVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSL 174 (1031)
Q Consensus 96 ~~~~l~~l~~L~l~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 174 (1031)
.++++++|++|+|++ |+++|.+|++|++|++|++|+|++|++++..|..+..+.+|+++++++|++.+.+|.++++++.
T Consensus 71 ~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~ 150 (313)
T d1ogqa_ 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred HHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcc
Confidence 599999999999986 8899999999999999999999999999888888999999999999999999999999999999
Q ss_pred CceeeccCcccCCCCCCcccccccc-cEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 175 INVLTLCHNNFSGRIPPSLGNLSNL-AYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~~~~~l~~L-~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
|+++++++|.++|.+|..++.+.++ +.+++++|++++..|..++++..+ .+++++|...+.+|..+..+++|+.++++
T Consensus 151 L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~ 229 (313)
T d1ogqa_ 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLA 229 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECC
T ss_pred cceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc
Confidence 9999999999999999999888876 889999999999888888887655 68999999999999999999999999999
Q ss_pred cCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccc-cCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ-LDGV 332 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~ 332 (1031)
+|.+++.+| .++.+++|+.|+|++|+++|.+|..|+++++|++|+|++|+|+|.+|. ++++++|+.+++++|+ +.|.
T Consensus 230 ~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 230 KNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp SSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEEST
T ss_pred ccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccCC
Confidence 999987655 688889999999999999999999999999999999999999988874 5788888888888886 5553
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-44 Score=397.28 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=207.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.... +....+.+.+|+.++++++|||||++++++.+++..|+
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 81 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 81 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHcc-CHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeee
Confidence 36799999999999999999965 57999999999765432 33457889999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|++..++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+|+...
T Consensus 82 vmE~~~gg~l~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~ 155 (316)
T d1fota_ 82 IMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 155 (316)
T ss_dssp EECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeeecCCccccccccccc---cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEec
Confidence 999999999999987654 477889999999999999999999 99999999999999999999999999999764
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. .....||+.|||||++.+..++.++||||+||++|||+||+.||...... . ....+... ...++...
T Consensus 156 ~~---~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--~---~~~~i~~~-~~~~p~~~-- 224 (316)
T d1fota_ 156 DV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--K---TYEKILNA-ELRFPPFF-- 224 (316)
T ss_dssp SC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHHC-CCCCCTTS--
T ss_pred cc---cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH--H---HHHHHHcC-CCCCCCCC--
Confidence 32 34578999999999999999999999999999999999999998754321 1 11121111 11222111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
..++.+++.+||++||.+|+ |++|+++
T Consensus 225 ----s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 225 ----NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp ----CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ----CHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence 12567889999999999996 8998875
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.4e-45 Score=395.12 Aligned_cols=258 Identities=23% Similarity=0.294 Sum_probs=200.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----e
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----H 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----~ 833 (1031)
++|++.+.||+|+||+||+|.. .+++.||||+++.... .+....+.|.+|++++++++|||||++++++...+ .
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTT-TCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhc-cCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 5799999999999999999964 6799999999976543 23344678999999999999999999999987643 4
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||+++++|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++.++++|||.+.
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~ 159 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 159 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred EEEEEECCCCCEehhhhcccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhh
Confidence 799999999999999887643 589999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... .....+||+.|+|||++.+..+++++||||+||++|||+||+.||........ ... ..... ..
T Consensus 160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~---~~~~~--~~- 232 (277)
T d1o6ya_ 160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQ---HVRED--PI- 232 (277)
T ss_dssp ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH---HHHCC--CC-
T ss_pred hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH-HHH---HHhcC--CC-
Confidence 6543222 23456799999999999999999999999999999999999999875433111 111 11110 00
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARP-TMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~ 1031 (1031)
.+.....+...++.+++.+||++||++|| |++|+.+.|.|
T Consensus 233 -~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 233 -PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp -CGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred -CCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 00000011123677899999999999999 89999988763
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.9e-45 Score=398.70 Aligned_cols=257 Identities=21% Similarity=0.369 Sum_probs=206.6
Q ss_pred HhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
.++|++.+.||+|+||+||+|+.. +++.||||+++.... ....++|.+|++++++++||||+++++++.+.
T Consensus 12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~ 88 (301)
T d1lufa_ 12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---ADMQADFQREAALMAEFDNPNIVKLLGVCAVG 88 (301)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC---hHHHHHHHHHHHHHHhcCCCCcccceeeeccC
Confidence 367999999999999999999653 457899999976432 23467899999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCC---------------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCC
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDA---------------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGD 890 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 890 (1031)
+..++||||+++|+|.++++... ....+++.++..++.|++.||+|||++ +|||||
T Consensus 89 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrD 165 (301)
T d1lufa_ 89 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRD 165 (301)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeE
Confidence 99999999999999999986432 123478899999999999999999999 999999
Q ss_pred CCCCCeeeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCC-CCCCC
Q 043316 891 ISSKNVLLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN-HPRDY 967 (1031)
Q Consensus 891 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~-~P~~~ 967 (1031)
|||+||+++.++.+||+|||+|+....... ..+...+++.|+|||.+.+..++.++|||||||++|||++|. .||..
T Consensus 166 lKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~ 245 (301)
T d1lufa_ 166 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 245 (301)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred EcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence 999999999999999999999986643322 233567889999999999999999999999999999999986 56654
Q ss_pred cCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.... +. ...+.....+..+. .. ..++.+++.+||+.||++||||.||+++|+|
T Consensus 246 ~~~~--e~---~~~v~~~~~~~~p~---~~---~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~ 298 (301)
T d1lufa_ 246 MAHE--EV---IYYVRDGNILACPE---NC---PLELYNLMRLCWSKLPADRPSFCSIHRILQR 298 (301)
T ss_dssp SCHH--HH---HHHHHTTCCCCCCT---TC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCHH--HH---HHHHHcCCCCCCCc---cc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 4321 11 12222222222221 11 2357789999999999999999999999874
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-44 Score=389.79 Aligned_cols=252 Identities=24% Similarity=0.390 Sum_probs=194.6
Q ss_pred hccCccceeecCCCccEEEEEeCC----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||.||+|.+.. +..||||+++... .....+.|.+|++++++++|||||+++|++.+ +..
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 82 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV 82 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSC
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeE
Confidence 579999999999999999996532 4578999886543 23346789999999999999999999999964 678
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++|++.+++.... ..+++.++..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+|+.
T Consensus 83 ~iv~E~~~~g~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~ 157 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 157 (273)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEEeccCCcHHhhhhccC--CCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhhee
Confidence 99999999999999876543 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 915 LNPHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 915 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
...... ......||+.|+|||++.++.++.++|||||||++|||+| |..||...... .....+........+.
T Consensus 158 ~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~ 232 (273)
T d1mp8a_ 158 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPP 232 (273)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTCCCCCCT
T ss_pred ccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCC
Confidence 654332 2345668999999999999999999999999999999998 89998765442 1122222222222222
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. ...++.+++.+||+.||++|||++||++.|+
T Consensus 233 ~------~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~ 264 (273)
T d1mp8a_ 233 N------CPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 264 (273)
T ss_dssp T------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C------CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1 1236778999999999999999999999886
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.3e-44 Score=389.08 Aligned_cols=254 Identities=23% Similarity=0.338 Sum_probs=206.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh-----hhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-----EMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~ 831 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++++..... .....+.+.+|+.++++++ ||||+++++++.++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 6799999999999999999965 579999999987643221 1223457889999999997 99999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
+..|+||||+++|+|.++++... .+++.+++.++.||++||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~ 156 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGF 156 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cceEEEEEcCCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchh
Confidence 99999999999999999997643 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
++...+.. ..+...||+.|+|||.+.+ ..++.++||||+||++|||+||+.||...... .....+.. .
T Consensus 157 a~~~~~~~-~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~--~~~~~i~~---~ 230 (277)
T d1phka_ 157 SCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LMLRMIMS---G 230 (277)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---T
T ss_pred eeEccCCC-ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH--HHHHHHHh---C
Confidence 99876533 3455789999999999864 34678999999999999999999998754431 11111111 1
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.. .......++.+++.+||++||++|||++|+++
T Consensus 231 -~~~~~~~--~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 231 -NYQFGSP--EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp -CCCCCTT--TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -CCCCCCc--ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1111111 11122346788999999999999999999976
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-45 Score=398.85 Aligned_cols=249 Identities=24% Similarity=0.361 Sum_probs=206.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHh-cCCCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT-EIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~-~l~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++++..... ....+.+.+|+.++. .++|||||++++++.+++..|+
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~-~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi 80 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 80 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC-hHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeE
Confidence 6799999999999999999955 579999999997654322 345667777877765 6899999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.++++... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+...
T Consensus 81 vmEy~~~g~L~~~i~~~~---~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~ 154 (320)
T d1xjda_ 81 VMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENM 154 (320)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeecCCCcHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcc
Confidence 999999999999997654 478899999999999999999999 99999999999999999999999999999776
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........||+.|+|||++.+..++.++||||+||++|||+||+.||...... .. ...+... .+.++..
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~--~~---~~~i~~~-~~~~p~~--- 225 (320)
T d1xjda_ 155 LGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--EL---FHSIRMD-NPFYPRW--- 225 (320)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH---HHHHHHC-CCCCCTT---
T ss_pred cccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH--HH---HHHHHcC-CCCCCcc---
Confidence 5555566678999999999999999999999999999999999999998754331 11 1222111 1222221
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHH-HHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMK-KVC 1026 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~-evl 1026 (1031)
. ..++.+++.+||+.||++|||+. |++
T Consensus 226 ~---s~~~~dli~~~L~~dP~~R~s~~~~l~ 253 (320)
T d1xjda_ 226 L---EKEAKDLLVKLFVREPEKRLGVRGDIR 253 (320)
T ss_dssp S---CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred C---CHHHHHHHHHhcccCCCCCcCHHHHHH
Confidence 1 23577899999999999999995 664
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-45 Score=392.42 Aligned_cols=256 Identities=26% Similarity=0.427 Sum_probs=195.2
Q ss_pred hccCccceeecCCCccEEEEEeC--CC--cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--SG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||+||+|+.. ++ ..||||++++... .+....+.|.+|+.++++++|||||+++|++.++ ..
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~-~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-ch
Confidence 57999999999999999999642 23 4789999876543 2334567899999999999999999999999764 67
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++|++.+++.... ..+++..+..++.|||.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~ 160 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 160 (273)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred heeeeeecCcchhhhhhccc--CCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhh
Confidence 89999999999998887543 3589999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... .....++..|+|||++.+..++.++|||||||++|||+| |+.||...... . ....+... ..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~--~---~~~~i~~~-~~~~ 234 (273)
T d1u46a_ 161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--Q---ILHKIDKE-GERL 234 (273)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--H---HHHHHHTS-CCCC
T ss_pred cccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH--H---HHHHHHhC-CCCC
Confidence 7544332 233457889999999999999999999999999999998 89998654332 1 11111111 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+. +.. ....+.+++.+||+.||++|||++||.+.|++
T Consensus 235 ~~-~~~---~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~ 271 (273)
T d1u46a_ 235 PR-PED---CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271 (273)
T ss_dssp CC-CTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC-ccc---ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 11 111 12357789999999999999999999999864
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-44 Score=396.32 Aligned_cols=252 Identities=21% Similarity=0.405 Sum_probs=199.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCc----EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.+|++.++||+|+||+||+|.+ .+|+ +||||+++... .....+.|.+|++++++++|||||+++|+|.++ .
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~ 84 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T 84 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-S
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-C
Confidence 4699999999999999999965 3454 68889886532 234577899999999999999999999999875 4
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++++||+.+|+|.+++.... ..+++..+.+++.|||.||+|||++ +||||||||+||+++.++++||+|||+|+
T Consensus 85 ~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~ 159 (317)
T d1xkka_ 85 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 159 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHH
T ss_pred eeEEEEeccCCcccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccce
Confidence 678899999999999887653 4689999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
........ .....||+.|+|||++.++.++.++|||||||++|||+| |+.||+..... .....+ ........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~--~~~~~i---~~~~~~~~ 234 (317)
T d1xkka_ 160 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSIL---EKGERLPQ 234 (317)
T ss_dssp HTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG--GHHHHH---HHTCCCCC
T ss_pred ecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH--HHHHHH---HcCCCCCC
Confidence 87543332 234568999999999999999999999999999999999 78888755432 122222 22222222
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. ....+.+++.+||+.||++|||++||++.|+
T Consensus 235 p~~------~~~~~~~li~~cl~~dP~~RPs~~eil~~l~ 268 (317)
T d1xkka_ 235 PPI------CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268 (317)
T ss_dssp CTT------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Ccc------cCHHHHHHHHHhCCCChhhCcCHHHHHHHHH
Confidence 211 1235778999999999999999999998875
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.8e-44 Score=398.71 Aligned_cols=247 Identities=22% Similarity=0.272 Sum_probs=207.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+. .+|+.||||++.+... .+....+.+.+|++++++++|||||++++++.+....++|
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHc-cCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 6799999999999999999965 5799999999976543 2334577899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+.+|+|.+++.... .+++.++..++.||+.||+|||++ +||||||||+|||++.++++||+|||+|+....
T Consensus 120 ~e~~~~g~l~~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~ 193 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cccccccchhhhHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeeccc
Confidence 99999999999997653 589999999999999999999999 999999999999999999999999999998753
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .....||+.|||||++.+..++.++||||+||++|||+||+.||..... .. ....+.... ...+. .
T Consensus 194 ~---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--~~---~~~~i~~~~-~~~p~---~- 260 (350)
T d1rdqe_ 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQ---IYEKIVSGK-VRFPS---H- 260 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HHHHHHHCC-CCCCT---T-
T ss_pred c---cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH--HH---HHHHHhcCC-CCCCc---c-
Confidence 2 3456899999999999999999999999999999999999999864432 11 112221111 11111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
...++.+++.+||+.||.+|+ |++|+++
T Consensus 261 --~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 123577899999999999994 8999875
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-44 Score=396.58 Aligned_cols=251 Identities=21% Similarity=0.282 Sum_probs=206.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||+++... .+.+.+.+|++++++++|||||++++++.+++.+|+
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-----~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~l 78 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-----ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 36799999999999999999965 578999999997653 234568899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC--CceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE--HEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~ 914 (1031)
||||+++|+|.+++.... ..+++.+++.++.||+.||+|||++ ||+||||||+||+++.+ ..+||+|||+++.
T Consensus 79 vmE~~~gg~L~~~i~~~~--~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~ 153 (321)
T d1tkia_ 79 IFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhc
Confidence 999999999999997653 3589999999999999999999999 99999999999999854 4799999999987
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... .......+|+.|+|||...+..++.++||||+||++|||++|+.||...... .. ...+.. .......
T Consensus 154 ~~~~-~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~--~~---~~~i~~---~~~~~~~ 224 (321)
T d1tkia_ 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QI---IENIMN---AEYTFDE 224 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HH---HHHHHH---TCCCCCH
T ss_pred cccC-CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH--HH---HHHHHh---CCCCCCh
Confidence 6432 3345677899999999999999999999999999999999999998654331 11 111111 1111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........++.+++.+||+.||++|||++|+++
T Consensus 225 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111112346788999999999999999999986
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.1e-44 Score=401.60 Aligned_cols=252 Identities=19% Similarity=0.249 Sum_probs=201.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHH---HHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFL---NEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~---~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.+.||+|+||.||+|+. .+|+.||||++.+...... .....+. +|+++++.++|||||++++++.+++.
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~-~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~ 81 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 81 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHH-TCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchh-hHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCE
Confidence 36899999999999999999965 5799999999976543222 2233344 44777788899999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ |||||||||+|||++.++.+||+|||+|+
T Consensus 82 ~~ivmE~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~ 155 (364)
T d1omwa3 82 LSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 155 (364)
T ss_dssp EEEEECCCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCE
T ss_pred EEEEEEecCCCcHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceee
Confidence 999999999999999997653 478899999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.+... ......||+.|+|||++.+ ..++.++||||+||++|||+||+.||........ .... ..........+.
T Consensus 156 ~~~~~--~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~~-~~~~~~~~~~~~ 230 (364)
T d1omwa3 156 DFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEID-RMTLTMAVELPD 230 (364)
T ss_dssp ECSSS--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH--HHHH-HHSSSCCCCCCS
T ss_pred ecCCC--cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH--HHHH-HhcccCCCCCCC
Confidence 76543 2345689999999999875 4689999999999999999999999875443211 1111 111111112221
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
. ...++.++|.+||++||++||| ++|+++
T Consensus 231 ~------~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 231 S------FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp S------SCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred C------CCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 1 1235778999999999999999 688764
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-44 Score=395.35 Aligned_cols=252 Identities=24% Similarity=0.275 Sum_probs=199.0
Q ss_pred HhccCccc-eeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhc-CCCCceeeeeeeEec----
Q 043316 758 IDDFGEKY-CIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE-IRHRNIIKFHGFCSN---- 830 (1031)
Q Consensus 758 ~~~~~~~~-~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~niv~l~~~~~~---- 830 (1031)
.++|.+.. .||+|+||+||+|+. .+++.||||+++.. ..+.+|+.++.+ .+|||||++++++.+
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~---------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~ 80 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAG 80 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc---------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccC
Confidence 46798765 699999999999954 67999999998542 346689988655 489999999999865
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCceEEe
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHEAHVS 907 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 907 (1031)
+..+|+||||++||+|.+++.... ...+++.+++.++.||+.||+|||++ ||+||||||+||+++. ++.+||+
T Consensus 81 ~~~~~ivmEy~~gg~L~~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~ 156 (335)
T d2ozaa1 81 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 156 (335)
T ss_dssp EEEEEEEEECCCSEEHHHHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEEC
T ss_pred CCEEEEEEECCCCCcHHHHHHhcC-CCCcCHHHHHHHHHHHHHHHHHHHHc---CCcccccccccccccccccccccccc
Confidence 467899999999999999997643 24689999999999999999999999 9999999999999985 4579999
Q ss_pred ccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 987 (1031)
|||+|+..... .......||+.|+|||++.+..++.++||||+||++|||+||+.||........ ...... ....
T Consensus 157 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~-~~~~~~---~i~~ 231 (335)
T d2ozaa1 157 DFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGMKT---RIRM 231 (335)
T ss_dssp CCTTCEECCCC-CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC------------CCCS
T ss_pred ccceeeeccCC-CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH-HHHHHH---HHhc
Confidence 99999876543 334567899999999999999999999999999999999999999864432110 000001 1111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.........++.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 232 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp CSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1111111222233457889999999999999999999986
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-44 Score=392.62 Aligned_cols=256 Identities=22% Similarity=0.349 Sum_probs=195.2
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~ 831 (1031)
++|++.+.||+|+||.||+|... +++.||||+++.... ....+.+.+|+..+.++ +|+||+.+++++.+.
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 89 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 89 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC---cHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence 67999999999999999999642 356899999976432 23456788888888777 689999999998654
Q ss_pred -CeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCee
Q 043316 832 -QHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897 (1031)
Q Consensus 832 -~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 897 (1031)
...++||||+++|+|.++++.... ...+++.++..++.||++||+|||++ +||||||||+||+
T Consensus 90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NIL 166 (299)
T d1ywna1 90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 166 (299)
T ss_dssp TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCcccee
Confidence 568999999999999999975421 23488999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCC-CCCCCcCccchh
Q 043316 898 LDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN-HPRDYVSTNFSS 974 (1031)
Q Consensus 898 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~-~P~~~~~~~~~~ 974 (1031)
++.++++||+|||+|+....... ......||+.|+|||++.++.++.++|||||||++|||+||. .||...... ..
T Consensus 167 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-~~ 245 (299)
T d1ywna1 167 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EE 245 (299)
T ss_dssp ECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HH
T ss_pred ECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-HH
Confidence 99999999999999987644332 234567999999999999999999999999999999999975 576544332 11
Q ss_pred hhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. .+........+... ..++.+++.+||+.||++|||++||++.|+
T Consensus 246 ~~~---~~~~~~~~~~~~~~------~~~l~~li~~cl~~dP~~Rpt~~eil~~L~ 292 (299)
T d1ywna1 246 FCR---RLKEGTRMRAPDYT------TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 292 (299)
T ss_dssp HHH---HHHHTCCCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHH---HHhcCCCCCCCccC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111 22222222222211 225778999999999999999999999986
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-44 Score=391.92 Aligned_cols=258 Identities=20% Similarity=0.206 Sum_probs=196.8
Q ss_pred ccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhh-hcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEe
Q 043316 763 EKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEM-ADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEY 840 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 840 (1031)
..++||+|+||+||+|+. .+|+.||||+++........ ...+.+.+|++++++++|||||++++++.+++..|+||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 457899999999999965 57999999999765432211 1235688999999999999999999999999999999999
Q ss_pred ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 841 LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 841 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
++++++..+.... ..+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|+.......
T Consensus 82 ~~~~~~~~~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~ 155 (299)
T d1ua2a_ 82 METDLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 155 (299)
T ss_dssp CSEEHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred hcchHHhhhhhcc---cCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCcc
Confidence 9998887776543 3578899999999999999999999 999999999999999999999999999988765555
Q ss_pred CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc-------------
Q 043316 921 NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL------------- 986 (1031)
Q Consensus 921 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~------------- 986 (1031)
.....+||+.|+|||++.+. .++.++||||+||++|||+||+.||....... .............
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T d1ua2a_ 156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDY 234 (299)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhccchh
Confidence 55567899999999998654 57999999999999999999999986544321 1111111100000
Q ss_pred --CCCCCCCChh--HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 --DHRLPTPSRD--VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 --~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+..... .......+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence 0000000000 0011236789999999999999999999986
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-44 Score=391.36 Aligned_cols=257 Identities=22% Similarity=0.370 Sum_probs=208.0
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~ 831 (1031)
++|+..++||+|+||.||+|++ .+++.||||+++... .......|.+|+.+++++ +|||||+++|++.++
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~ 99 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc---CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence 6889999999999999999964 346799999997643 234566899999999999 699999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCC---------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDA---------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+..++||||+++|+|.++++... ....+++..+.+++.||++|++|||++ +||||||||+||
T Consensus 100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NI 176 (311)
T d1t46a_ 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (311)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccccccc
Confidence 99999999999999999996542 223588999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHhC-CCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG-NHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG-~~P~~~~~~~~~ 973 (1031)
+++.++.+|++|||.++........ .....||+.|+|||++.++.++.++|||||||++|||+|+ ++||..... ..
T Consensus 177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~-~~ 255 (311)
T d1t46a_ 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DS 255 (311)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS-SH
T ss_pred cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCH-HH
Confidence 9999999999999999977543332 2346789999999999999999999999999999999995 444443332 22
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.+...+. ....+..+.. ....+.++|.+||+.||++|||++||+++|++
T Consensus 256 ~~~~~i~---~~~~~~~~~~------~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~ 304 (311)
T d1t46a_ 256 KFYKMIK---EGFRMLSPEH------APAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (311)
T ss_dssp HHHHHHH---HTCCCCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHh---cCCCCCCccc------ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2222222 2222222221 12357889999999999999999999999974
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-44 Score=388.23 Aligned_cols=256 Identities=24% Similarity=0.368 Sum_probs=203.9
Q ss_pred hccCccceeecCCCccEEEEEeCC--------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS--------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
++|++++.||+|+||.||+|+... +..||||+++.... .....++.+|...+.++ +|||||+++++|.
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~ 89 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT---EKDLSDLISEMEMMKMIGKHKNIINLLGACT 89 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC---hHHHHHHHHHHHHHHHhcCCCeEEecccccc
Confidence 579999999999999999996422 24799999976542 23467788999998888 7999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+++..++||||+++|+|.++++.... ...+++.++..++.||+.||+|||+. +||||||||+||
T Consensus 90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~Ni 166 (299)
T d1fgka_ 90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 166 (299)
T ss_dssp SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccce
Confidence 99999999999999999999975432 24589999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||+++....... ......+++.|+|||.+.++.+++++|||||||++|||++ |+.||......
T Consensus 167 Ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~-- 244 (299)
T d1fgka_ 167 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-- 244 (299)
T ss_dssp EECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred eecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH--
Confidence 999999999999999997654322 2344678999999999999999999999999999999998 68887644431
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+........+.. . ..++.+++.+||+.||.+|||+.||++.|++
T Consensus 245 ---~~~~~i~~~~~~~~p~~---~---~~~l~~li~~cl~~dP~~Rps~~eil~~L~~ 293 (299)
T d1fgka_ 245 ---ELFKLLKEGHRMDKPSN---C---TNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293 (299)
T ss_dssp ---HHHHHHHTTCCCCCCSS---C---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---HHHHHHHcCCCCCCCcc---c---hHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 12222222222222221 1 2357889999999999999999999999974
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-44 Score=393.15 Aligned_cols=255 Identities=24% Similarity=0.367 Sum_probs=201.3
Q ss_pred hccCccceeecCCCccEEEEEeC-CCc--EEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGI--IFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.++||+|+||+||+|.+. ++. .||||+++.... ....+.|.+|+++++++ +|||||+++|++.+++..
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~ 86 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 86 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC---hHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCee
Confidence 67889999999999999999654 444 577888754332 23466799999999998 799999999999999999
Q ss_pred EEEEEeccCCCchhhcccCC-------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 835 FIVSEYLDRGSLTTILKDDA-------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
++||||+++|+|.++++... ....+++.++.+++.|||+|+.|+|+. +|+||||||+|||++.+
T Consensus 87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~ 163 (309)
T d1fvra_ 87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 163 (309)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCC
Confidence 99999999999999997542 235689999999999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCC-CCCCcCccchhhhhhHH
Q 043316 902 HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNH-PRDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~-P~~~~~~~~~~~~~~~~ 980 (1031)
+.+||+|||+|+..... .......||..|+|||.+.++.++.++|||||||++|||++|.. ||..... . ....
T Consensus 164 ~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~--~---~~~~ 237 (309)
T d1fvra_ 164 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--A---ELYE 237 (309)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--H---HHHH
T ss_pred CceEEcccccccccccc-ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH--H---HHHH
Confidence 99999999999865432 22345568999999999999999999999999999999999764 6654332 1 1222
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.+........+.. ...++.++|.+||+.||++|||++||++.|++
T Consensus 238 ~i~~~~~~~~~~~------~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~ 282 (309)
T d1fvra_ 238 KLPQGYRLEKPLN------CDDEVYDLMRQCWREKPYERPSFAQILVSLNR 282 (309)
T ss_dssp HGGGTCCCCCCTT------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhcCCCCCCcc------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2222222222211 12367789999999999999999999998863
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-44 Score=389.13 Aligned_cols=261 Identities=20% Similarity=0.270 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.. .+++.||||+++.... .....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--ChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEE
Confidence 6899999999999999999965 6799999999976432 223457889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+.++.+ +++.... ...+++.+++.++.||+.||+|||++ |||||||||+||+++.++.+||+|||.|+....
T Consensus 80 ~e~~~~~~~-~~~~~~~-~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~ 154 (298)
T d1gz8a_ 80 FEFLHQDLK-KFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 154 (298)
T ss_dssp EECCSEEHH-HHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EeecCCchh-hhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccC
Confidence 999976544 4443322 24589999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh------------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ------------ 984 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~------------ 984 (1031)
.........||+.|+|||++.... ++.++||||+||++|+|++|+.||....... .+.........
T Consensus 155 ~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 233 (298)
T d1gz8a_ 155 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSM 233 (298)
T ss_dssp CSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHHHHHhcCCCchhhccccccc
Confidence 555556678999999999877665 5789999999999999999999987544321 11111110000
Q ss_pred -hcCCCCCCC-ChhHH----HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 -NLDHRLPTP-SRDVM----DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 -~~~~~~~~~-~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.. ..... ....++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~ 282 (298)
T d1gz8a_ 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282 (298)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 000000000 00001 11246788999999999999999999986
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-43 Score=386.97 Aligned_cols=250 Identities=24% Similarity=0.394 Sum_probs=198.5
Q ss_pred cceeecCCCccEEEEEeCC----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-CCeeEEEE
Q 043316 764 KYCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN-AQHSFIVS 838 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 838 (1031)
.++||+|+||+||+|.+.+ ...||||+++... .....++|.+|++++++++|||||+++|++.+ ++..++||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ 108 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 108 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCC---CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc---CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence 5689999999999997643 2368999986532 23456889999999999999999999999865 56899999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... ...++..+.+++.|+++||.|+|+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 109 E~~~~g~l~~~~~~~~--~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~ 183 (311)
T d1r0pa_ 109 PYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 183 (311)
T ss_dssp ECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTT
T ss_pred EEeecCchhhhhcccc--ccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhcccc
Confidence 9999999999987653 3567888999999999999999999 9999999999999999999999999999876433
Q ss_pred CC----CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 919 SS----NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 919 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.. ......||+.|+|||.+.++.++.++||||||+++|||+||+.||....... .... .+.....+..+..
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~-~~~~---~i~~g~~~~~p~~- 258 (311)
T d1r0pa_ 184 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITV---YLLQGRRLLQPEY- 258 (311)
T ss_dssp TCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHH---HHHTTCCCCCCTT-
T ss_pred ccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH-HHHH---HHHcCCCCCCccc-
Confidence 22 1234568999999999999999999999999999999999888865433221 1111 1111112222211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...++.+++.+||+.||++|||+.||++.|++
T Consensus 259 -----~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~ 290 (311)
T d1r0pa_ 259 -----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 290 (311)
T ss_dssp -----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----CcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 12357789999999999999999999999863
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-43 Score=385.38 Aligned_cols=262 Identities=23% Similarity=0.318 Sum_probs=197.7
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----ee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----HS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----~~ 834 (1031)
++|...+.||+|+||+||+|+. +|+.||||+++... .....+.+|+..+.+++|||||++++++.+.+ ..
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~-----~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~ 76 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEE
Confidence 5678889999999999999986 78999999986542 11222334555667889999999999997653 57
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC-----CCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD-----CLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
++||||+++|+|.+++++. .++|.++++++.|+|.||+|+|+. ..+|||||||||+||+++.++.+||+||
T Consensus 77 ~lv~Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DF 152 (303)
T d1vjya_ 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEEecccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEec
Confidence 9999999999999999764 489999999999999999999973 1249999999999999999999999999
Q ss_pred ccccccCCCCC----CceeeccccCcccccccccc------CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhh--
Q 043316 910 GIAKFLNPHSS----NWTAFAGTFGYAAPEIAHMM------RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN-- 977 (1031)
Q Consensus 910 g~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~-- 977 (1031)
|+++....... ......||+.|+|||++.+. .++.++|||||||++|||+||..||.........+..
T Consensus 153 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~ 232 (303)
T d1vjya_ 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcc
Confidence 99987754322 23356799999999998764 3577999999999999999999887543322111110
Q ss_pred ----hHHHhh-----hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 978 ----MITEIN-----QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 978 ----~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...... ....+.++.. ....+....+.+++.+||+.||++|||+.||++.|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~ 294 (303)
T d1vjya_ 233 PSDPSVEEMRKVVCEQKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGG-GGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred cccchHHHHHHHHhccccCCCCCcc-cCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 111111 1111222211 1122344568899999999999999999999998864
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-43 Score=385.54 Aligned_cols=256 Identities=20% Similarity=0.332 Sum_probs=207.1
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|+..++||+|+||+||+|.+. +++.||||+++... .......|.+|++++++++|||||+++|++..++
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~ 96 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 96 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc---ChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC
Confidence 68899999999999999999652 35789999997543 2234567999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCC-------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceE
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA-------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH 905 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 905 (1031)
..++||||+++|+|.+++.... ....+++..+.+++.|+|+||+|||++ +|+||||||+||+++.++++|
T Consensus 97 ~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~K 173 (308)
T d1p4oa_ 97 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 173 (308)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEE
T ss_pred ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEE
Confidence 9999999999999999986431 223468899999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCC-CCCCCcCccchhhhhhHHHh
Q 043316 906 VSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGN-HPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~-~P~~~~~~~~~~~~~~~~~~ 982 (1031)
|+|||+|+........ .....+|+.|+|||.+.++.++.++|||||||++|||+||. .||...... . ....+
T Consensus 174 l~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~--~---~~~~i 248 (308)
T d1p4oa_ 174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--Q---VLRFV 248 (308)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--H---HHHHH
T ss_pred EeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHH--H---HHHHH
Confidence 9999999876443222 23446899999999999999999999999999999999985 676544321 1 11111
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
........+. .. ...+.+++.+||+.||++|||++||++.|++
T Consensus 249 ~~~~~~~~p~---~~---~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 291 (308)
T d1p4oa_ 249 MEGGLLDKPD---NC---PDMLFELMRMCWQYNPKMRPSFLEIISSIKE 291 (308)
T ss_dssp HTTCCCCCCT---TC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HhCCCCCCcc---cc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111111111 11 2367889999999999999999999999874
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.3e-43 Score=383.92 Aligned_cols=260 Identities=22% Similarity=0.294 Sum_probs=201.5
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.++||+|+||+||+|+..+|+.||||+++.... .....+.+.+|+.++++++|||||++++++.+++..++++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~ 79 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhc--ChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEE
Confidence 57999999999999999999888999999999976542 2234678999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+.++.+..+.+.. ..+++.+++.++.||+.||+|||++ +||||||||+||+++.++.+|++|||.|......
T Consensus 80 e~~~~~~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~ 153 (286)
T d1ob3a_ 80 EHLDQDLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (286)
T ss_dssp ECCSEEHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EeehhhhHHHHHhhc---CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccC
Confidence 999887777776544 4589999999999999999999999 9999999999999999999999999999987655
Q ss_pred CCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh--------------
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN-------------- 983 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~-------------- 983 (1031)
........+++.|+|||.+.+. .++.++||||+||++|||++|+.||....... ..........
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~ 232 (286)
T d1ob3a_ 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELP 232 (286)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred ccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCChhhccchhhhh
Confidence 5555566789999999998764 56899999999999999999999987554311 1111110000
Q ss_pred ---hhcCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 ---QNLDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ---~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+..... .......+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000000000 0111235778999999999999999999984
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-43 Score=382.65 Aligned_cols=243 Identities=21% Similarity=0.331 Sum_probs=197.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcCC--CCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEIR--HRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~~ 833 (1031)
++|++.+.||+|+||+||+|.. .+++.||||++.+....+. .....++.+|+.++++++ |||||++++++.+++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 5799999999999999999954 5799999999976543221 122344678999999986 8999999999999999
Q ss_pred eEEEEEeccC-CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEecccc
Q 043316 834 SFIVSEYLDR-GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDFGI 911 (1031)
Q Consensus 834 ~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~ 911 (1031)
.++||||+.+ +++.++++.. ..+++.+++.++.||+.||+|||++ ||+||||||+||+++.+ +.+||+|||+
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~---~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~ 157 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGS 157 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEEeccCcchHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECcccc
Confidence 9999999976 5777787654 3589999999999999999999999 99999999999999854 7899999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
|+.... ...+...||+.|+|||++.+..+ +.++||||+||++|||+||+.||..... +.......+..+
T Consensus 158 a~~~~~--~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--------i~~~~~~~~~~~ 227 (273)
T d1xwsa_ 158 GALLKD--TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------IIRGQVFFRQRV 227 (273)
T ss_dssp CEECCS--SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HHHCCCCCSSCC
T ss_pred ceeccc--ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--------HhhcccCCCCCC
Confidence 987543 33456789999999999987665 6789999999999999999999864321 111111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..++.+++.+||+.||++|||++|+++
T Consensus 228 ----------s~~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 228 ----------SSECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp ----------CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----------CHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 135778999999999999999999976
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-42 Score=377.79 Aligned_cols=261 Identities=21% Similarity=0.277 Sum_probs=195.7
Q ss_pred HhccCccceeecCCCccEEEEEe-CC-CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC---CCCceeeeeeeEec--
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI---RHRNIIKFHGFCSN-- 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~~-- 830 (1031)
.++|++.+.||+|+||+||+|+. .+ ++.||||+++.....+ .....+.+|+.+++.+ +||||++++++|..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~ 83 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 83 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc--hHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc
Confidence 36899999999999999999965 44 6789999997654222 2233456777776655 89999999999853
Q ss_pred ---CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEe
Q 043316 831 ---AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVS 907 (1031)
Q Consensus 831 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 907 (1031)
....+++|||++++++....... ...+++..++.++.|++.||+|||++ +||||||||+|||++.++.+||+
T Consensus 84 ~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~ 158 (305)
T d1blxa_ 84 TDRETKLTLVFEHVDQDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 158 (305)
T ss_dssp CSSEEEEEEEEECCSCBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cccCceEEEEEEeccCCchhhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeec
Confidence 35789999999988775554433 24578999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh---
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ--- 984 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~--- 984 (1031)
|||+++.... ........||+.|+|||++.+..++.++||||+||++|||+||+.||...... ............
T Consensus 159 dfg~~~~~~~-~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~ 236 (305)
T d1blxa_ 159 DFGLARIYSF-QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGE 236 (305)
T ss_dssp SCCSCCCCCG-GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCG
T ss_pred chhhhhhhcc-cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhhCCCch
Confidence 9999986532 23345678999999999999999999999999999999999999998755432 111111111000
Q ss_pred ------------hcCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 ------------NLDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ------------~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............ .......+.+++.+||++||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000000000000 0011235678999999999999999999975
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-41 Score=365.98 Aligned_cols=260 Identities=17% Similarity=0.228 Sum_probs=206.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|+. .+++.||||+++.... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC--ChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEE
Confidence 5799999999999999999965 6789999999966432 234577899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
+|++.++++..+++... .+++..++.++.|++.||+|||++ +||||||||+||+++.++.+||+|||.|+....
T Consensus 80 ~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~ 153 (292)
T d1unla_ 80 FEFCDQDLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSEEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred eeecccccccccccccc---ccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccC
Confidence 99999999988876543 578899999999999999999999 999999999999999999999999999998766
Q ss_pred CCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC--------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH-------- 988 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~-------- 988 (1031)
.........+++.|+|||++.+.. ++.++||||+||++|||++|+.||.........+.. +.........
T Consensus 154 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 232 (292)
T d1unla_ 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR-IFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHH-HHHHHCCCCTTTCTTGGG
T ss_pred CCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHH-HHhhcCCCChhhhhhhhh
Confidence 555555667789999999987655 689999999999999999999996443332221111 1111110000
Q ss_pred -----------CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 989 -----------RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 989 -----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...............+.+++.+|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000001111235678999999999999999999975
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-40 Score=367.72 Aligned_cols=260 Identities=20% Similarity=0.278 Sum_probs=196.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec------
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN------ 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------ 830 (1031)
.++|++.+.||+|+||+||+|+. .+|+.||||++..... .....+++.+|++++++++||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 86 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C--TTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence 47899999999999999999965 6899999999866542 22346778999999999999999999999855
Q ss_pred --CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 831 --AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 831 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
++..++||||++++.+..+.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~~~---~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~d 160 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 160 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECC
T ss_pred ccCceEEEEEeccCCCccchhhhcc---cccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeee
Confidence 35689999999888776655443 3578899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCC----CceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 909 FGIAKFLNPHSS----NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 909 fg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||+++....... ......||+.|+|||++.+. .+++++||||+||++|||++|+.||+..... .....+....
T Consensus 161 fg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~--~~~~~i~~~~ 238 (318)
T d3blha1 161 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLC 238 (318)
T ss_dssp CTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHH
T ss_pred cceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHH--HHHHHHHHhc
Confidence 999987653221 22345789999999998765 6899999999999999999999998754331 1111111111
Q ss_pred hhcCCCC----------------CCCChhHHHH------HHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRL----------------PTPSRDVMDK------LMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~----------------~~~~~~~~~~------~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.. ........+. ...+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~ 304 (318)
T d3blha1 239 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304 (318)
T ss_dssp CCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence 1111110 0000111111 234678999999999999999999986
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-41 Score=373.48 Aligned_cols=255 Identities=20% Similarity=0.281 Sum_probs=192.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----- 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----- 832 (1031)
++|++.+.||+|+||+||+|.. .+|+.||||+++.... .....+.+.+|++++++++|||||+++++|...+
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ--SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS--SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc--ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 5799999999999999999964 5799999999976432 2234678899999999999999999999997654
Q ss_pred -eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 -HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
.+|+||||+ +.++..+.+. ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+|++|||+
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~ 167 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 167 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecc-cccHHHHHHh----ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccc
Confidence 579999999 5677777654 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH-----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI----------- 979 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~----------- 979 (1031)
|+..+. ..+...||+.|+|||++.+. .++.++||||+||++|||++|+.||........ +....
T Consensus 168 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 243 (346)
T d1cm8a_ 168 ARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ-LKEIMKVTGTPPAEFV 243 (346)
T ss_dssp CEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHH
T ss_pred eeccCC---ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHH-HHHHHhccCCCcHHHH
Confidence 987643 33567899999999998764 568999999999999999999999875533110 00000
Q ss_pred --------HHhhhhcCCCCCCC-ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 980 --------TEINQNLDHRLPTP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 980 --------~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............. ..........+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~ 300 (346)
T d1cm8a_ 244 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300 (346)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00001111110000 0000111235678999999999999999999986
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-40 Score=372.31 Aligned_cols=259 Identities=20% Similarity=0.248 Sum_probs=194.9
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----e
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----H 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----~ 833 (1031)
++|++.+.||+|+||+||+|. ..+|+.||||++.+.. .....+.+.+|++++++++||||+++++++.... .
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~ 84 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 84 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc---ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccc
Confidence 569999999999999999995 5689999999997543 2344678899999999999999999999996643 2
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.+++++|+.+|+|.+++... .+++..++.++.|++.||+|||++ |||||||||+||+++.++.+||+|||+|.
T Consensus 85 ~~~l~~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~ 157 (345)
T d1pmea_ 85 DVYLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 157 (345)
T ss_dssp CEEEEEECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEeecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCcee
Confidence 35555667799999999753 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH----------
Q 043316 914 FLNPHSS---NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI---------- 979 (1031)
Q Consensus 914 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~---------- 979 (1031)
....... ......||+.|+|||++.. ..++.++||||+||++|||++|+.||..............
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (345)
T d1pmea_ 158 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 237 (345)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred eccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhh
Confidence 6643221 2345678999999999854 4578999999999999999999999865443111100000
Q ss_pred --------HHhhhhcCCCCCCCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 980 --------TEINQNLDHRLPTPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 980 --------~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
................. ......++.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~ 294 (345)
T d1pmea_ 238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294 (345)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000111111111000 0011235778999999999999999999986
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-41 Score=370.08 Aligned_cols=256 Identities=22% Similarity=0.317 Sum_probs=205.1
Q ss_pred HhccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC-CceeeeeeeEecCC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKFHGFCSNAQ 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~~~~~~~~ 832 (1031)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.....+....+.+.+|++++++++| |||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 36799999999999999999954 25889999999876544444556778899999999976 89999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++||||+.+|+|.+++.... .+++..+..++.||+.|++|+|+. +||||||||+||+++.++.+||+|||+|
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~~~---~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a 176 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 176 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred ceeeeeecccccHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccch
Confidence 9999999999999999997654 367789999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC-CCceeeccccCcccccccccc--CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 913 KFLNPHS-SNWTAFAGTFGYAAPEIAHMM--RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 913 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
+.+.... .......|++.|+|||.+.+. .++.++||||+||++|||+||+.||........ . ..+..........
T Consensus 177 ~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~-~~i~~~~~~~~~~ 254 (322)
T d1vzoa_ 177 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-Q-AEISRRILKSEPP 254 (322)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-H-HHHHHHHHHCCCC
T ss_pred hhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-H-HHHHHhcccCCCC
Confidence 8764332 234456789999999998764 467899999999999999999999875543211 1 1111111122222
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
++.. ...++.+++.+||++||++|| |++|+++
T Consensus 255 ~~~~------~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 255 YPQE------MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp CCTT------SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred Cccc------CCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 2211 123677889999999999999 4788875
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-41 Score=376.00 Aligned_cols=255 Identities=24% Similarity=0.267 Sum_probs=191.6
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------C
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------Q 832 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------~ 832 (1031)
+|+..++||+|+||+||+|+. .+|+.||||++..... .+.+|++++++++||||++++++|... .
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~ 92 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS--------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCC
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch--------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCce
Confidence 588899999999999999965 5799999999865431 123799999999999999999998542 3
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEecccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGI 911 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~ 911 (1031)
+.++||||++++.+..+.........+++.+++.++.||+.||+|||++ ||+||||||+|||++.++ .+||+|||+
T Consensus 93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~ 169 (350)
T d1q5ka_ 93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 169 (350)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTT
T ss_pred EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccc
Confidence 5789999998765444433223344689999999999999999999999 999999999999999875 899999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH-----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI----------- 979 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~----------- 979 (1031)
++...... ......|++.|+|||.+.+ ..++.++||||+||++|||++|+.||....... .+....
T Consensus 170 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~ 247 (350)
T d1q5ka_ 170 AKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQI 247 (350)
T ss_dssp CEECCTTS-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCHHHH
T ss_pred hhhccCCc-ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHH-HHHHHHHHhCCChHHhh
Confidence 98775432 3345689999999998765 468999999999999999999999987544321 111110
Q ss_pred HHhh-hhcCCCCCC---CC-h--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 980 TEIN-QNLDHRLPT---PS-R--DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 980 ~~~~-~~~~~~~~~---~~-~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... .......+. .. . .......++.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 302 (350)
T d1q5ka_ 248 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302 (350)
T ss_dssp HHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 000001110 00 0 00011235778999999999999999999985
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=4.6e-40 Score=365.19 Aligned_cols=252 Identities=19% Similarity=0.272 Sum_probs=196.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEec--CCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSN--AQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~--~~~~ 834 (1031)
++|++.++||+|+||+||+|+. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. ....
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~ 107 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 107 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence 6799999999999999999965 57999999998653 3567889999999995 9999999999974 4568
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEecccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAK 913 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~ 913 (1031)
++||||+++++|.++.+ .+++.+++.++.||+.||+|||++ |||||||||+|||++.++ .+||+|||+|+
T Consensus 108 ~~v~e~~~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~ 178 (328)
T d3bqca1 108 ALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 178 (328)
T ss_dssp EEEEECCCSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCE
T ss_pred eEEEeecCCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccce
Confidence 99999999999987643 488899999999999999999999 999999999999998765 59999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh----------
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI---------- 982 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~---------- 982 (1031)
..... .......+|+.|+|||.+.+.. ++.++||||+||++|||++|+.||.................
T Consensus 179 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~ 257 (328)
T d3bqca1 179 FYHPG-QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 257 (328)
T ss_dssp ECCTT-CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred eccCC-CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhh
Confidence 76543 2345667899999999987654 79999999999999999999999875544322111111000
Q ss_pred ----------hhhcCCCCCC------CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 ----------NQNLDHRLPT------PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ----------~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......... ..........++.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 258 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp HTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000000 00000111235788999999999999999999986
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.5e-40 Score=358.91 Aligned_cols=256 Identities=15% Similarity=0.192 Sum_probs=192.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc-eeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN-IIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++.... ..+++.+|++++++++|++ |+.+.+++.+++..++
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~------~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~i 80 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT------TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc------cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEE
Confidence 5699999999999999999964 579999999876543 1234778999999998666 5555666688889999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~ 913 (1031)
||||+. +++.+.+.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++. +..+|++|||+|+
T Consensus 81 vme~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~ 154 (299)
T d1ckia_ 81 VMELLG-PSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154 (299)
T ss_dssp EEECCC-CBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCE
T ss_pred EEEEcC-Cchhhhhhhcc--CCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcce
Confidence 999995 56666655432 3589999999999999999999999 9999999999999864 4569999999999
Q ss_pred ccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 914 FLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 914 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
.+..... ......||+.|+|||++.+..+++++|||||||++|||+||+.||............. .......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~-~~~~~~~ 233 (299)
T d1ckia_ 155 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE-RISEKKM 233 (299)
T ss_dssp ECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HH-HHHHHHH
T ss_pred eccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHH-HhhcccC
Confidence 7754322 1234679999999999999999999999999999999999999987554322111110 0000000
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+ ........++.+++..||+.||++||+++++.+.|+
T Consensus 234 ~~~~~---~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 274 (299)
T d1ckia_ 234 STPIE---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 274 (299)
T ss_dssp HSCHH---HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred CCChh---HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 00000 000011235778899999999999999999888775
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-39 Score=363.82 Aligned_cols=257 Identities=21% Similarity=0.246 Sum_probs=190.5
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec------C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN------A 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------~ 831 (1031)
++|++.++||+|+||+||+|.. .+|+.||||+++.... +....+.+.+|+.++++++|||||++++++.. .
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~ 94 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 94 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc--CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccC
Confidence 5799999999999999999965 5799999999976543 23345678999999999999999999999954 4
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...|+||||+.++.+..+ . ..+++.+++.++.||+.||+|||++ ||+||||||+||+++.++.+|++|||.
T Consensus 95 ~~~~iv~Ey~~~~l~~~~-~-----~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~ 165 (355)
T d2b1pa1 95 QDVYLVMELMDANLCQVI-Q-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_dssp CEEEEEEECCSEEHHHHH-T-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred ceeEEEEeccchHHHHhh-h-----cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhh
Confidence 678999999977655444 2 2478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-----------------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS----------------- 974 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~----------------- 974 (1031)
++..... .......+|+.|+|||++.+..+++++||||+||++|||++|+.||.........
T Consensus 166 ~~~~~~~-~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (355)
T d2b1pa1 166 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_dssp ----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred hhccccc-cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHH
Confidence 9876432 3345667899999999999999999999999999999999999998644321100
Q ss_pred hhhhHHHhhhhc-------------CCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 975 FSNMITEINQNL-------------DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 975 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............ ....+............+.+++.+|++.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp SCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000000000000 00111122222334557889999999999999999999985
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.6e-39 Score=353.67 Aligned_cols=254 Identities=17% Similarity=0.201 Sum_probs=199.5
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC-CceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++.... +.+.+.+|+++++.++| +|++.+++++.++...++
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~------~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~ 78 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS------DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 78 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT------TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc------CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEE
Confidence 5799999999999999999965 579999999885542 22346678888888865 899999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-----CCceEEecccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-----EHEAHVSDFGI 911 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~Dfg~ 911 (1031)
||||+ +++|.++++... ..+++.++..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||+
T Consensus 79 vme~~-~~~l~~~~~~~~--~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~ 152 (293)
T d1csna_ 79 VIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 152 (293)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHhhc--cchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccce
Confidence 99999 689999887543 3588999999999999999999999 9999999999999974 56899999999
Q ss_pred ccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-hhhhHHHhh
Q 043316 912 AKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-FSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~ 983 (1031)
|+.+..... ......||+.|||||++.+..++.++||||+||++|||+||+.||+........ ....+....
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~ 232 (293)
T d1csna_ 153 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK 232 (293)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred eEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhcc
Confidence 987643221 233467999999999999999999999999999999999999999755443211 111111111
Q ss_pred hhcC-CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLD-HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.... ..... ....++.+++..|++.+|++||+++.+.+.|+
T Consensus 233 ~~~~~~~l~~------~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~ 274 (293)
T d1csna_ 233 QSTPLRELCA------GFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274 (293)
T ss_dssp HHSCHHHHTT------TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred CCCChHHhcC------CCCHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 1100 00000 01135778888999999999999998887764
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-39 Score=360.62 Aligned_cols=255 Identities=20% Similarity=0.271 Sum_probs=194.3
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----Q 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~ 832 (1031)
++|++.++||+|+||+||+|+ ..+|+.||||++++... +....+.+.+|++++++++|||||++++++... .
T Consensus 18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc--ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 579999999999999999996 46799999999976532 233466789999999999999999999998643 3
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..+++++|+.+|+|.+++... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++.+|++|||.+
T Consensus 96 ~~~~i~~~~~gg~L~~~~~~~----~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a 168 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168 (348)
T ss_dssp CCCEEEEECCSEEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred ceEEEEEeecCCchhhhcccc----cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchh
Confidence 446677888899999999653 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh-------
Q 043316 913 KFLNPHSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ------- 984 (1031)
Q Consensus 913 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~------- 984 (1031)
..... ......|++.|+|||+..+.. ++.++||||+||++|+|++|+.||....... ....+.....
T Consensus 169 ~~~~~---~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~--~~~~i~~~~~~~~~~~~ 243 (348)
T d2gfsa1 169 RHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID--QLKLILRLVGTPGAELL 243 (348)
T ss_dssp -CCTG---GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCHHHH
T ss_pred cccCc---ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCChHHh
Confidence 86532 234567899999999876654 6889999999999999999999987543311 1111100000
Q ss_pred ------------hcCCCCCCCCh--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 ------------NLDHRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ------------~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.... ........+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~ 300 (348)
T d2gfsa1 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300 (348)
T ss_dssp TTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence 00001111000 00011235778999999999999999999986
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6e-35 Score=329.11 Aligned_cols=257 Identities=18% Similarity=0.197 Sum_probs=187.9
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-----------CCceeeeeee
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-----------HRNIIKFHGF 827 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----------h~niv~l~~~ 827 (1031)
+|+++++||+|+||+||+|+. .+|+.||||++++... ..+.+.+|+.++++++ |+||++++++
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-----~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~ 88 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-----YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 88 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-----HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-----chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence 589999999999999999965 5799999999976532 2456678888887764 5789999998
Q ss_pred Eec--CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCc-
Q 043316 828 CSN--AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHE- 903 (1031)
Q Consensus 828 ~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~- 903 (1031)
+.. ....++++++...+..............+++..+..++.||+.|++|||+ . ||+||||||+||+++.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~ 165 (362)
T d1q8ya_ 89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSP 165 (362)
T ss_dssp EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETT
T ss_pred eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCcc
Confidence 864 35667777777665444443333334568889999999999999999998 5 9999999999999987654
Q ss_pred -----eEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc-----h
Q 043316 904 -----AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF-----S 973 (1031)
Q Consensus 904 -----~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~-----~ 973 (1031)
++++|||.+...... .....||+.|+|||++.+..++.++||||+||+++||++|+.||....... .
T Consensus 166 ~~~~~~kl~dfg~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~ 242 (362)
T d1q8ya_ 166 ENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 242 (362)
T ss_dssp TTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred cccceeeEeecccccccccc---cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhH
Confidence 999999999865432 245679999999999999999999999999999999999999986433210 0
Q ss_pred hhhhhHHHh--------------hhh-----cCCCCCCCC------------hhHHHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 974 SFSNMITEI--------------NQN-----LDHRLPTPS------------RDVMDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 974 ~~~~~~~~~--------------~~~-----~~~~~~~~~------------~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
......... ... ....+.... .........+.+++.+|++.||.+|||+
T Consensus 243 ~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta 322 (362)
T d1q8ya_ 243 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 322 (362)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCH
Confidence 000000000 000 000111100 0012334578899999999999999999
Q ss_pred HHHHH
Q 043316 1023 KKVCN 1027 (1031)
Q Consensus 1023 ~evl~ 1027 (1031)
+|+++
T Consensus 323 ~e~L~ 327 (362)
T d1q8ya_ 323 GGLVN 327 (362)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99986
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.98 E-value=2.9e-33 Score=308.40 Aligned_cols=249 Identities=31% Similarity=0.453 Sum_probs=190.3
Q ss_pred CcccEEecCCCcCcC--CCccccccCCcCcEeeCCC-CcccCCCCccccccccceEEEeeccccCCCCCccccCcccCce
Q 043316 101 PHLMYLNLSCNVLYG--NIPPQISNLSKLRALDLGN-NQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINV 177 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~--~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 177 (1031)
.+++.|||++|.++| .+|++|++|++|++|||++ |+++|.+|++|++|++|++|+|++|++++..|..+..+.+|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 478999999999988 5889999999999999986 8899999999999999999999999999888888888999999
Q ss_pred eeccCcccCCCCCCcccccccccEEEecccccccccCccccccccc-ccccccccccccccCccccccCcccEEEeecCc
Q 043316 178 LTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL-SILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L-~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+++++|.+.+.+|.+++++++|+++++++|.++|.+|..++.+.++ +.++++.|++++..|..+..+..+ .+++++|.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~ 208 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSE
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 9999999888889899999999999999999888888888887775 778888888888777777766544 57777777
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 336 (1031)
..+.+|..+..+++|+.|++++|.+.+.+| .++.+++|+.|+|++|+++|.+|..++++++|++|+|++|+++|.+|.
T Consensus 209 ~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~- 286 (313)
T d1ogqa_ 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ- 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-
T ss_pred cccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-
Confidence 777777777777777777777777765544 466666666666666666655555555555555555555555554442
Q ss_pred ccccccCceEEcccCC
Q 043316 337 IGNLSSLRTLYLYDNG 352 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~ 352 (1031)
++++++|+.+++++|+
T Consensus 287 ~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 287 GGNLQRFDVSAYANNK 302 (313)
T ss_dssp STTGGGSCGGGTCSSS
T ss_pred cccCCCCCHHHhCCCc
Confidence 3444444444444444
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.96 E-value=9.9e-29 Score=280.34 Aligned_cols=148 Identities=26% Similarity=0.422 Sum_probs=95.3
Q ss_pred CccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCcc
Q 043316 480 EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKL 559 (1031)
Q Consensus 480 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 559 (1031)
.+..+++|+.|++++|++++..+ +..+++|+.|++++|++++.. .+..++.++.+++++|.+++ ...+..++++
T Consensus 236 ~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l 309 (384)
T d2omza2 236 TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED--ISPISNLKNL 309 (384)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC--CGGGGGCTTC
T ss_pred hhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--cccccccccccccccccccc--ccccchhccc
Confidence 34455666666666666654332 555666666666666666432 25566667777777777664 2346666777
Q ss_pred ceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccc
Q 043316 560 HYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639 (1031)
Q Consensus 560 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 639 (1031)
++|++++|++++.. .+..+++|++|++++|+|++ ++ .+.++++|++|++++|+|+++.| +..+++|+.|++++|
T Consensus 310 ~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 310 TYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp SEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 77777777776543 26667777777777777763 33 46777777777777777776644 667777777777776
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.96 E-value=1.8e-28 Score=278.14 Aligned_cols=357 Identities=25% Similarity=0.315 Sum_probs=195.2
Q ss_pred EecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCccc
Q 043316 106 LNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNF 185 (1031)
Q Consensus 106 L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 185 (1031)
.+++.+++++.++ ...+.+|++|++++|+++ .+ +.++.|++|++|+|++|+++ .+|+ ++++++|++|++++|.+
T Consensus 27 ~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~-~l-~gl~~L~nL~~L~Ls~N~l~-~l~~-l~~L~~L~~L~L~~n~i 100 (384)
T d2omza2 27 TVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SI-DGVEYLNNLTQINFSNNQLT-DITP-LKNLTKLVDILMNNNQI 100 (384)
T ss_dssp HHTTCSSTTSEEC--HHHHTTCCEEECCSSCCC-CC-TTGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCC
T ss_pred HHhCCCCCCCccC--HHHhCCCCEEECCCCCCC-Cc-cccccCCCCCEEeCcCCcCC-CCcc-ccCCccccccccccccc
Confidence 3555556655444 245666777777777766 33 35666777777777777776 3442 66777777777777777
Q ss_pred CCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccc
Q 043316 186 SGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI 265 (1031)
Q Consensus 186 ~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 265 (1031)
++ +++ ++++++|+.|++++|.+++..+ ......+..+....|.+....+.................. ...+
T Consensus 101 ~~-i~~-l~~l~~L~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 171 (384)
T d2omza2 101 AD-ITP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTD-----LKPL 171 (384)
T ss_dssp CC-CGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCC-----CGGG
T ss_pred cc-ccc-cccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccch-----hhhh
Confidence 63 332 6677777777777776664322 2344555566666666553322222222222211111111 1223
Q ss_pred cccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCce
Q 043316 266 GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRT 345 (1031)
Q Consensus 266 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 345 (1031)
.............|... .+..+..+++++.+++++|.+++..| +..+++|++|++++|+++.. +.+..+++|+.
T Consensus 172 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 245 (384)
T d2omza2 172 ANLTTLERLDISSNKVS--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTD 245 (384)
T ss_dssp TTCTTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred ccccccccccccccccc--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccch
Confidence 33333344444444332 23345566666666666666654332 23345555555555555531 24555666666
Q ss_pred EEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecccccc
Q 043316 346 LYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425 (1031)
Q Consensus 346 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 425 (1031)
|++++|.+++..+ ++.+++|+.|++++|++++.. .+..+..++.+.++.|++.+. ..+..+++++.|++++|++
T Consensus 246 L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l 319 (384)
T d2omza2 246 LDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNI 319 (384)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCC
T ss_pred hccccCccCCCCc--ccccccCCEeeccCcccCCCC--ccccccccccccccccccccc--cccchhcccCeEECCCCCC
Confidence 6666666655432 555566666666666665432 245555555666555555542 2344455555555555555
Q ss_pred ccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhh
Q 043316 426 FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQF 505 (1031)
Q Consensus 426 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 505 (1031)
.++.+ +..+++|++|++++|++ ++ + +.+..+++|++|++++|+|++..| +
T Consensus 320 ~~l~~--l~~l~~L~~L~L~~n~l------------------------~~-l-~~l~~l~~L~~L~l~~N~l~~l~~--l 369 (384)
T d2omza2 320 SDISP--VSSLTKLQRLFFANNKV------------------------SD-V-SSLANLTNINWLSAGHNQISDLTP--L 369 (384)
T ss_dssp SCCGG--GGGCTTCCEEECCSSCC------------------------CC-C-GGGGGCTTCCEEECCSSCCCBCGG--G
T ss_pred CCCcc--cccCCCCCEEECCCCCC------------------------CC-C-hhHcCCCCCCEEECCCCcCCCChh--h
Confidence 44321 44445555555555444 32 2 246667778888888888776544 7
Q ss_pred hccccCceeecccc
Q 043316 506 EKLFSLNKLILNLN 519 (1031)
Q Consensus 506 ~~l~~L~~L~L~~N 519 (1031)
.++++|+.|+|++|
T Consensus 370 ~~l~~L~~L~L~~N 383 (384)
T d2omza2 370 ANLTRITQLGLNDQ 383 (384)
T ss_dssp TTCTTCSEEECCCE
T ss_pred ccCCCCCEeeCCCC
Confidence 77778888888776
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=6.1e-26 Score=248.39 Aligned_cols=269 Identities=23% Similarity=0.294 Sum_probs=130.6
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCcc
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQE 144 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 144 (1031)
|.|.+|.|+..+ |+ ++|+. + .+++++|+|++|+++...+..|.++++|++|++++|.++...|..
T Consensus 10 c~~~~~~C~~~~-----------L~-~lP~~-l--~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~ 74 (305)
T d1xkua_ 10 CHLRVVQCSDLG-----------LE-KVPKD-L--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA 74 (305)
T ss_dssp EETTEEECTTSC-----------CC-SCCCS-C--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTT
T ss_pred ecCCEEEecCCC-----------CC-ccCCC-C--CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhh
Confidence 689999996521 11 23321 2 145566666666665322234556666666666666665444555
Q ss_pred ccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccc
Q 043316 145 IGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLS 224 (1031)
Q Consensus 145 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 224 (1031)
|.++++|++|++++|+++ .+|..+. ..++.|++++|.+.+..+..+.....++.++...|...
T Consensus 75 f~~l~~L~~L~l~~n~l~-~l~~~~~--~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~-------------- 137 (305)
T d1xkua_ 75 FAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLK-------------- 137 (305)
T ss_dssp TTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCC--------------
T ss_pred hhCCCccCEecccCCccC-cCccchh--hhhhhhhccccchhhhhhhhhhcccccccccccccccc--------------
Confidence 555555555555555555 3443322 34444555555444333333333444444444443321
Q ss_pred cccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCc
Q 043316 225 ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNS 304 (1031)
Q Consensus 225 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 304 (1031)
.....+..+..+++|+.+++++|.++.. |..+ +++|++|++++|..++..+..|.+++.++.|++++|.
T Consensus 138 --------~~~~~~~~~~~l~~L~~l~l~~n~l~~l-~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~ 206 (305)
T d1xkua_ 138 --------SSGIENGAFQGMKKLSYIRIADTNITTI-PQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206 (305)
T ss_dssp --------GGGBCTTGGGGCTTCCEEECCSSCCCSC-CSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSC
T ss_pred --------ccCCCccccccccccCccccccCCcccc-Cccc--CCccCEEECCCCcCCCCChhHhhcccccccccccccc
Confidence 1122233444455555555555554432 2221 3455555555555555555555555555555555555
Q ss_pred cCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCcc------CcccccceEEcccccc
Q 043316 305 LSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEI------GYLKSLSKLELCRNHL 377 (1031)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~------~~l~~L~~L~L~~N~l 377 (1031)
+++..+..+.++++|++|+|++|.|+ .+|.+|.++++|++|+|++|+|+.+....| ..+.+|+.|+|++|.+
T Consensus 207 l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 207 ISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp CCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred ccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcC
Confidence 55444444444444444444444444 234455555555555555555554322222 2334455555555544
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=4.7e-26 Score=249.27 Aligned_cols=249 Identities=23% Similarity=0.332 Sum_probs=128.8
Q ss_pred cCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCc-cccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 126 KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPL-EIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 126 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
.++.+|-++++++ .+|..+. +++++|+|++|+++ .+|+ .|.++++|++|++++|.++...|..|.++++|++|++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l 86 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 86 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCC-CcChhHhhccccccccccccccccccchhhhhCCCccCEecc
Confidence 4455566666665 4555442 34555555555555 3332 4555555555555555555434444555555555555
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc--
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF-- 282 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-- 282 (1031)
++|+++ .+|..+ . ..++.|+++.|.+.+..+..+.....+..++...|...
T Consensus 87 ~~n~l~-~l~~~~------------------------~--~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~ 139 (305)
T d1xkua_ 87 SKNQLK-ELPEKM------------------------P--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS 139 (305)
T ss_dssp CSSCCS-BCCSSC------------------------C--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGG
T ss_pred cCCccC-cCccch------------------------h--hhhhhhhccccchhhhhhhhhhcccccccccccccccccc
Confidence 555554 333322 1 23444444444444433333444444444444444322
Q ss_pred ccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccC
Q 043316 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIG 362 (1031)
Q Consensus 283 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 362 (1031)
...+..|..+++|+.+++++|.++ .+|..+ +++|+.|++++|...+..+..+..++.+++|++++|.+++..+..+.
T Consensus 140 ~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~ 216 (305)
T d1xkua_ 140 GIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 216 (305)
T ss_dssp GBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred CCCccccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhcccccccccccccccccccccccc
Confidence 223344555666666666666655 233322 34555555555555555555566666666666666666655555566
Q ss_pred cccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhc
Q 043316 363 YLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409 (1031)
Q Consensus 363 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 409 (1031)
.+++|++|+|++|+|+ .+|.+|..+++|++|++++|+|+.+....|
T Consensus 217 ~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f 262 (305)
T d1xkua_ 217 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 262 (305)
T ss_dssp GSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred ccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhc
Confidence 6666666666666665 335555566666666666666555444333
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.3e-25 Score=242.81 Aligned_cols=207 Identities=22% Similarity=0.217 Sum_probs=138.0
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEee-ccccCCCCCccccCcccCceee
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFD-VNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~-~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
+.+++|+|++|+|++..|..|.++++|++||+++|++.+..+..+..+..++.++.. .|.++...|..++++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 456777777777764444457777777777777777776666666667777776654 4445444455667777777777
Q ss_pred ccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCC
Q 043316 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 180 L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
+++|.+.+..+..+....+|+.+++++|++++..+..|..+++|++|++++|++++..|..|.++++|+++++++|++++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence 77777665555566666777777777777765445566666677777777777765556666666777777777777766
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCC
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
..|..|.++++|++|++++|++.+..|..|.++++|++|++++|.+..
T Consensus 192 i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 666666666677777777777666556666666666666666666653
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=4.8e-25 Score=238.35 Aligned_cols=222 Identities=23% Similarity=0.231 Sum_probs=126.2
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee-cCcC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY-KNSL 257 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~-~N~l 257 (1031)
+.++++++ .+|..+. +++++|+|++|+|++..+..|.++++|++|++++|++.+..+..+..+..++.++.. .|.+
T Consensus 17 ~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 17 SCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp ECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence 34444444 4444332 344555555555543333345555555555555555554444444555555555433 4444
Q ss_pred CCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccc
Q 043316 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI 337 (1031)
Q Consensus 258 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 337 (1031)
+...|..|.++++|++|++++|.+....+..+...++|+.+++++|++++..+..|..+++|+.|++++|++++..+..|
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f 173 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAF 173 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTT
T ss_pred ccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhh
Confidence 44445555556666666666665554444455555666666666666655445555555556666666666655555566
Q ss_pred cccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCC
Q 043316 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403 (1031)
Q Consensus 338 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 403 (1031)
.++++|+++++++|++++..|..|..+++|++|++++|++.+..+..|+++++|++|++++|.+..
T Consensus 174 ~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 174 RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred ccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 666666666666666666666666666666666666666666666666666666666666666553
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.6e-23 Score=223.68 Aligned_cols=198 Identities=26% Similarity=0.294 Sum_probs=141.1
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
.+.+.|.++++++ .+|+.+. ++|++|||++|+|++..+..|.++++|++|+|++|+++ .+|. ++.+++|++|+|+
T Consensus 11 ~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~-~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 11 SHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV-DGTLPVLGTLDLS 85 (266)
T ss_dssp TCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEEC-CSCCTTCCEEECC
T ss_pred CCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-cccc-ccccccccccccc
Confidence 3444566666666 4666553 46777777777777544556777777777777777776 4543 4667777777777
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCC
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 261 (1031)
+|+++ .+|..+.++++|++|++++|.+.+..+..+..+.++++|++++|.++...+..+..+++|+.|++++|++++..
T Consensus 86 ~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~ 164 (266)
T d1p9ag_ 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP 164 (266)
T ss_dssp SSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCC
T ss_pred ccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccC
Confidence 77777 45667777777888888777777666666777777777777777777555566667777777777777777777
Q ss_pred CccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 262 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus 165 ~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 165 AGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 777777777777788777777 67777777777777777777664
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=2.7e-23 Score=221.82 Aligned_cols=111 Identities=26% Similarity=0.205 Sum_probs=47.7
Q ss_pred ccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceE
Q 043316 267 NLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTL 346 (1031)
Q Consensus 267 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 346 (1031)
++++|++|++++|++.+..+..+..+.++++|++++|.++...+..+..+++|+.+++++|++++..+..|+.+++|++|
T Consensus 98 ~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L 177 (266)
T d1p9ag_ 98 TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (266)
T ss_dssp TCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred cccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCcccccccccccee
Confidence 33333333333333333333333333333333333333333333333334444444444444444334444445555555
Q ss_pred EcccCCCcCccCCccCcccccceEEccccccC
Q 043316 347 YLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378 (1031)
Q Consensus 347 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 378 (1031)
+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus 178 ~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 178 LLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp ECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 55555554 33444444555555555555543
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.85 E-value=6.2e-22 Score=199.63 Aligned_cols=165 Identities=18% Similarity=0.132 Sum_probs=121.4
Q ss_pred CccceeecCCCccEEEEEeCCCcEEEEEEccchhhh--------------hhhhcHHHHHHHHHHHhcCCCCceeeeeee
Q 043316 762 GEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLF--------------DEMADQDEFLNEVLALTEIRHRNIIKFHGF 827 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~ 827 (1031)
.++++||+|+||+||+|...+|+.||||+++..... ........+.+|...+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 467899999999999998889999999987532211 001123445678899999999999988876
Q ss_pred EecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEe
Q 043316 828 CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVS 907 (1031)
Q Consensus 828 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 907 (1031)
.. .+++|||+++..+.+ ++...+..++.|++++++|||++ ||+||||||+||+++++ .++|+
T Consensus 83 ~~----~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~li 144 (191)
T d1zara2 83 EG----NAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWII 144 (191)
T ss_dssp ET----TEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEEC
T ss_pred cC----CEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEE
Confidence 42 379999998754432 33455678999999999999999 99999999999999864 58999
Q ss_pred ccccccccCCCCCCceeeccccCccc------cccccccCCCccccchhhhH
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAA------PEIAHMMRATEKYDVHSFGV 953 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~sDvwslG~ 953 (1031)
|||.|.....+... .|.. .|. ..+.|+.++|+||..-
T Consensus 145 DFG~a~~~~~~~~~--------~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~ 187 (191)
T d1zara2 145 DFPQSVEVGEEGWR--------EILERDVRNIITY-FSRTYRTEKDINSAID 187 (191)
T ss_dssp CCTTCEETTSTTHH--------HHHHHHHHHHHHH-HHHHHCCCCCHHHHHH
T ss_pred ECCCcccCCCCCcH--------HHHHHHHHHHHHH-HcCCCCCcccHHHHHH
Confidence 99999865432211 1111 111 2356888999999643
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.83 E-value=1.9e-19 Score=200.27 Aligned_cols=137 Identities=29% Similarity=0.353 Sum_probs=79.5
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
++++|||++|+++ .+|+. +++|++|+|++|+|+ .+|+.+ .+|+.|++++|+++ .++.. .+.|++|+|+
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence 4677888888776 57753 456777788877777 667554 35667777777766 34321 1346667777
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
+|.++ .+|. ++++++|++|++++|.+. ..|..+ ..+..+.+..+... .+..+..++.++.|++++|...
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~-~~~~~~---~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLK-KLPDLP---PSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCS-CCCCCC---TTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCS
T ss_pred ccccc-cccc-hhhhccceeecccccccc-cccccc---ccccchhhcccccc--ccccccccccceeccccccccc
Confidence 77666 5553 456666777776666665 233322 23334444433332 2334455555555555555544
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.82 E-value=4.1e-19 Score=197.50 Aligned_cols=199 Identities=25% Similarity=0.347 Sum_probs=109.1
Q ss_pred CEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEe
Q 043316 77 RVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156 (1031)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 156 (1031)
+++.|||++++++ .+|+. .++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.- .+.|++|++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~----~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL----PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC----CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEEC
T ss_pred CCCEEEeCCCCCC-CCCCC----CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccccccc
Confidence 3456677777665 35532 456777777777776 566543 45666677777665 33321 124677777
Q ss_pred eccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccc
Q 043316 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS 236 (1031)
Q Consensus 157 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 236 (1031)
++|.++ .+|. ++.+++|++|++++|.++ ..|.. ...+..+.+.++... .+..++.++.++.|++++|....
T Consensus 106 ~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~-~~~~~---~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~- 176 (353)
T d1jl5a_ 106 SNNQLE-KLPE-LQNSSFLKIIDVDNNSLK-KLPDL---PPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKK- 176 (353)
T ss_dssp CSSCCS-SCCC-CTTCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSS-
T ss_pred cccccc-cccc-hhhhccceeecccccccc-ccccc---cccccchhhcccccc--ccccccccccceecccccccccc-
Confidence 777766 5553 466777777777777666 33332 344555555555443 33445666667777777776652
Q ss_pred cCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 237 IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 237 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
++... ...+.+...++.+.. +| .+..++.|+.+++++|... .+|. ...++..+.+.+|.+.
T Consensus 177 ~~~~~---~~~~~l~~~~~~~~~-~~-~~~~l~~L~~l~l~~n~~~-~~~~---~~~~l~~~~~~~~~~~ 237 (353)
T d1jl5a_ 177 LPDLP---LSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLLK-TLPD---LPPSLEALNVRDNYLT 237 (353)
T ss_dssp CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS-SCCS---CCTTCCEEECCSSCCS
T ss_pred ccccc---ccccccccccccccc-cc-ccccccccccccccccccc-cccc---cccccccccccccccc
Confidence 33221 223444554444432 22 3455666666666666554 2222 2334455555555544
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=3.6e-22 Score=231.23 Aligned_cols=110 Identities=19% Similarity=0.201 Sum_probs=76.5
Q ss_pred ccccEEEecccccccc-cCccccccccccccccccccccc----ccCccccccCcccEEEeecCcCCCC----CCcccc-
Q 043316 197 SNLAYLYLNNNSLFGS-IPNVMGNLNSLSILDLSQNQLRG----SIPFSLANLSNLGILYLYKNSLFGF----IPSVIG- 266 (1031)
Q Consensus 197 ~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~- 266 (1031)
.+|+.||+++|++++. +.+.+..+++|++|+|++|+++. .+...+..+++|+.|+|++|.++.. +...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 3688999999998753 24446677888889999888762 3445567788888888888887521 112222
Q ss_pred cccccccccccccccccc----CCcccccCCCCCeeeeccCccC
Q 043316 267 NLKSLFELDLSENQLFGS----IPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 267 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
...+|++|+|++|+++.. ++..+..+++|++|++++|.++
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 234688888888887643 3445667788888888888765
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=3.1e-19 Score=185.22 Aligned_cols=165 Identities=20% Similarity=0.281 Sum_probs=73.0
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1031)
..++++.+++++.+ .+..+++|++|++++|+++ .++ .+.++++|++|++++|++++..| +..+++|++|++++|
T Consensus 22 ~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n 95 (227)
T d1h6ua2 22 IKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (227)
T ss_dssp HHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCC-cch-hHhcCCCCcEeecCCceeecccc--ccccccccccccccc
Confidence 33445555554432 2344555555555555555 332 35555555555555555543211 445555555555555
Q ss_pred ccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCc
Q 043316 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPS 263 (1031)
Q Consensus 184 ~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 263 (1031)
.++ .++ .++++++|+++++++|...+. ..+.....++.+.++.+.+.... .+.++++|+.|++++|.++...
T Consensus 96 ~~~-~i~-~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~-- 167 (227)
T d1h6ua2 96 PLK-NVS-AIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLT-- 167 (227)
T ss_dssp CCS-CCG-GGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCG--
T ss_pred ccc-ccc-ccccccccccccccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccccch--
Confidence 544 332 244455555555555444321 11333344444444444443211 1333444444444444443221
Q ss_pred ccccccccccccccccccc
Q 043316 264 VIGNLKSLFELDLSENQLF 282 (1031)
Q Consensus 264 ~~~~l~~L~~L~Ls~N~l~ 282 (1031)
.+.++++|++|+|++|+++
T Consensus 168 ~l~~l~~L~~L~Ls~n~l~ 186 (227)
T d1h6ua2 168 PLANLSKLTTLKADDNKIS 186 (227)
T ss_dssp GGTTCTTCCEEECCSSCCC
T ss_pred hhcccccceecccCCCccC
Confidence 1334444444444444443
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=2e-18 Score=181.10 Aligned_cols=151 Identities=17% Similarity=0.204 Sum_probs=67.0
Q ss_pred EEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccC-cccccccccccccccc-
Q 043316 153 MLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQ- 230 (1031)
Q Consensus 153 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~- 230 (1031)
.++.+++.++ .+|..+. +++++|+|++|.++...+..|.++++|++|++++|.+...+| ..|.+++++++|++..
T Consensus 12 ~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 12 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp EEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred EEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 3444444444 4444332 244455555555442222244555555555555555443332 2344555555554432
Q ss_pred cccccccCccccccCcccEEEeecCcCCCCCC-ccccccccccccccccccccccCCcccccCC-CCCeeeeccCccC
Q 043316 231 NQLRGSIPFSLANLSNLGILYLYKNSLFGFIP-SVIGNLKSLFELDLSENQLFGSIPLSFSNLS-SLTLMSLFNNSLS 306 (1031)
Q Consensus 231 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~ 306 (1031)
|++....+..|.++++|+.|++++|.++...+ ..+..+..++.+..+++++....+..|.+++ .++.|++++|+++
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~ 166 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 166 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred ccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccc
Confidence 34444444445555555555555555543221 1222334444444444444433333444332 4445555555554
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.75 E-value=5.9e-18 Score=175.38 Aligned_cols=210 Identities=22% Similarity=0.342 Sum_probs=147.1
Q ss_pred ChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceE
Q 043316 315 NLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLV 394 (1031)
Q Consensus 315 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 394 (1031)
.+.++..++++.+++++.+ .++.+.+|+.|++.+|+++.. ..+..+++|++|++++|++++..| +..+++|+++
T Consensus 17 ~l~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l 90 (227)
T d1h6ua2 17 ALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITEL 90 (227)
T ss_dssp HHHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEE
T ss_pred HHHHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc--cccccccccc
Confidence 4556667778888777643 466788888899988888764 357888888888888888876543 7788888888
Q ss_pred eccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccC
Q 043316 395 NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIY 474 (1031)
Q Consensus 395 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~ 474 (1031)
++++|.++.+ ..+..+++|+.++++++...... .+...+.++.+.++++.+..
T Consensus 91 ~~~~n~~~~i--~~l~~l~~L~~l~l~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~----------------------- 143 (227)
T d1h6ua2 91 ELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITN----------------------- 143 (227)
T ss_dssp ECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCC-----------------------
T ss_pred cccccccccc--ccccccccccccccccccccccc--hhccccchhhhhchhhhhch-----------------------
Confidence 8888877654 34667777777777766654332 24445566666665554432
Q ss_pred CCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCccccc
Q 043316 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMG 554 (1031)
Q Consensus 475 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 554 (1031)
...+..+++|+.|++++|.+.+.. .++++++|+.|+|++|++++. + .+.++++|++|+|++|++++. + .+.
T Consensus 144 ---~~~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i-~-~l~ 214 (227)
T d1h6ua2 144 ---ISPLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDV-S-PLA 214 (227)
T ss_dssp ---CGGGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBC-G-GGT
T ss_pred ---hhhhccccccccccccccccccch--hhcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCC-c-ccc
Confidence 123455667778888888776432 367778888888888888743 3 377788888888888888754 3 377
Q ss_pred CCCccceecccC
Q 043316 555 NLSKLHYLNLSN 566 (1031)
Q Consensus 555 ~l~~L~~L~Ls~ 566 (1031)
++++|++|++++
T Consensus 215 ~l~~L~~L~lsn 226 (227)
T d1h6ua2 215 NTSNLFIVTLTN 226 (227)
T ss_dssp TCTTCCEEEEEE
T ss_pred cCCCCCEEEeeC
Confidence 888888888863
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=3.4e-18 Score=179.25 Aligned_cols=219 Identities=18% Similarity=0.147 Sum_probs=124.0
Q ss_pred ceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccC-ccccccCcccEEEee-
Q 043316 176 NVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP-FSLANLSNLGILYLY- 253 (1031)
Q Consensus 176 ~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~- 253 (1031)
+.++.++++++ .+|+.+. +++++|+|++|+++...+..|.++++|++|+|++|.+...+| ..|.++++++++.+.
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 56677777777 6776553 567777777777764334456777777777777777654443 345666666666654
Q ss_pred cCcCCCCCCccccccccccccccccccccccCCc-ccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 332 (1031)
.|.+....+..|.++++|++|++++|++....+. .+..+..+..+...++.+ ...
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l------------------------~~i 143 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINI------------------------HTI 143 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTC------------------------CEE
T ss_pred cccccccccccccccccccccccchhhhccccccccccccccccccccccccc------------------------ccc
Confidence 3455555555566666666666666655422111 122233333333333333 332
Q ss_pred Ccccccccc-cCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccC
Q 043316 333 IPPSIGNLS-SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRN 411 (1031)
Q Consensus 333 ~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 411 (1031)
.+..+..++ .++.|++++|+++...+..+.....++.+++++|+++...+..|.++++|++|++++|+++.+.+..|.+
T Consensus 144 ~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~ 223 (242)
T d1xwdc1 144 ERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 223 (242)
T ss_dssp CTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTT
T ss_pred cccccccccccceeeecccccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcC
Confidence 233333332 5666677777766544433333222333345666666544555666677777777777766666666666
Q ss_pred Cccccceecc
Q 043316 412 LTSLERLRFN 421 (1031)
Q Consensus 412 l~~L~~L~L~ 421 (1031)
+++|+.+++.
T Consensus 224 l~~L~~l~~~ 233 (242)
T d1xwdc1 224 LKKLRARSTY 233 (242)
T ss_dssp CCEEESSSEE
T ss_pred CcccccCcCC
Confidence 6666666553
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.74 E-value=1.2e-18 Score=175.43 Aligned_cols=175 Identities=27% Similarity=0.283 Sum_probs=134.8
Q ss_pred ccCcccccCCCCCCCccCCCCCcEEEeeCCcccC-CChhhhhccccCceeecccccccCCCcccccccCccceeecCcCc
Q 043316 466 FNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG-KIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANK 544 (1031)
Q Consensus 466 L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 544 (1031)
++.++++++ .+|..+. +++++|+|++|+|++ ..+..|.++++|+.|+|++|+++...+..|..+++|++|+|++|+
T Consensus 13 v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~ 89 (192)
T d1w8aa_ 13 VDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp EECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccc
Confidence 334444444 4555442 578899999999975 456778889999999999999988888889999999999999999
Q ss_pred CCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccc
Q 043316 545 LSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGC 624 (1031)
Q Consensus 545 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 624 (1031)
|+...|.+|.++++|++|+|++|+|+++.+++|..+++|++|+|++|.+....+ ...-...++.+.+..|.++...|..
T Consensus 90 l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p~~ 168 (192)
T d1w8aa_ 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAPSK 168 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSSTT
T ss_pred ccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCChh
Confidence 998778889999999999999999998888889999999999999998874332 2222345788888888888766654
Q ss_pred cccCCcceEEecccccccCCCCC
Q 043316 625 FEEMRSLSRIDIAYNELQGPIPN 647 (1031)
Q Consensus 625 ~~~l~~L~~L~l~~N~l~~~~p~ 647 (1031)
+..++.++++.|.++|..+.
T Consensus 169 ---l~~~~l~~L~~n~l~C~~~~ 188 (192)
T d1w8aa_ 169 ---VRDVQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp ---TTTSBGGGSCTTTCCCCCC-
T ss_pred ---hcCCEeeecCHhhCcCCCCC
Confidence 44566678888888875543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.74 E-value=2.8e-18 Score=175.19 Aligned_cols=183 Identities=24% Similarity=0.346 Sum_probs=115.5
Q ss_pred ccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
+...+++.+.+++.++. ..+..|++|++++|.++. ++ .+..+++|++|+|++|++++ +| .++.+++|++|++++
T Consensus 26 ~i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~ 99 (210)
T d1h6ta2 26 TIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDE 99 (210)
T ss_dssp HHHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCS
T ss_pred HHHHHhCcCccCCccCH--HHhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccc
Confidence 34445666666655543 356677777777777763 33 36677777777777777763 33 356677777777777
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP 262 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 262 (1031)
|+++ .+| .+.++++|+.|++++|.+. .+ ..+.++++|+.+++++|.+++ +..+..+++|+++++++|++++..
T Consensus 100 n~i~-~l~-~l~~l~~L~~L~l~~~~~~-~~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~- 172 (210)
T d1h6ta2 100 NKVK-DLS-SLKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIV- 172 (210)
T ss_dssp SCCC-CGG-GGTTCTTCCEEECTTSCCC-CC-GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCG-
T ss_pred cccc-ccc-ccccccccccccccccccc-cc-ccccccccccccccccccccc--cccccccccccccccccccccccc-
Confidence 7776 344 4666777777777777664 22 346666677777777777653 234556667777777777766532
Q ss_pred ccccccccccccccccccccccCCcccccCCCCCeeeec
Q 043316 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301 (1031)
Q Consensus 263 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 301 (1031)
.++++++|++|+|++|+++ .+| .|.++++|++|+|+
T Consensus 173 -~l~~l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 173 -PLAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELF 208 (210)
T ss_dssp -GGTTCTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEEE
T ss_pred -cccCCCCCCEEECCCCCCC-CCh-hhcCCCCCCEEEcc
Confidence 2666677777777777666 344 46666667766665
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=4.8e-21 Score=221.56 Aligned_cols=380 Identities=18% Similarity=0.095 Sum_probs=189.6
Q ss_pred CcccEEEeecCcCCCCC-Cccccccccccccccccccccc----cCCcccccCCCCCeeeeccCccCCC----CCCCCC-
Q 043316 245 SNLGILYLYKNSLFGFI-PSVIGNLKSLFELDLSENQLFG----SIPLSFSNLSSLTLMSLFNNSLSGS----IPPTQG- 314 (1031)
Q Consensus 245 ~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~- 314 (1031)
.+|+.||+++|++++.. ...+..+++++.|+|++|.++. .+...+..+++|++|+|++|+|+.. +...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 36899999999998632 3446678899999999998873 3445677889999999999987521 111111
Q ss_pred ChhhhhhhhccccccCCC----CcccccccccCceEEcccCCCcCccCCccC-----cccccceEEccccccCCCc----
Q 043316 315 NLEALSELGLYINQLDGV----IPPSIGNLSSLRTLYLYDNGFYGLVPNEIG-----YLKSLSKLELCRNHLSGVI---- 381 (1031)
Q Consensus 315 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~~---- 381 (1031)
...+|+.|+|++|+++.. ++..+..+++|++|+|++|.++......+. ..............+....
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 161 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccc
Confidence 123466666666665532 233445555666666666655432111110 0111222222222221100
Q ss_pred cccccCCCCCceEeccCcccCCcCchh----c-cCCccccceeccccccccccc----cccCCCCCCCeeccccccccCc
Q 043316 382 PHSIGNLTKLVLVNMCENHLFGLIPKS----F-RNLTSLERLRFNQNNLFGKVY----EAFGDHPNLTFLDLSQNNLYGE 452 (1031)
Q Consensus 382 p~~~~~l~~L~~L~l~~N~l~~~~~~~----~-~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~ 452 (1031)
...+.....++.++++.+......... + ........+++..+.+..... ..+...+.++.+++++|.+...
T Consensus 162 ~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~ 241 (460)
T d1z7xw1 162 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 241 (460)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhcccccc
Confidence 011223344555555544432111000 0 111123333343333322111 1122334444444444443211
Q ss_pred ccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCC----ChhhhhccccCceeecccccccCCCccc
Q 043316 453 ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGK----IPVQFEKLFSLNKLILNLNQLSGGVPLE 528 (1031)
Q Consensus 453 ~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 528 (1031)
.. ....+........++.|++++|.+... ....+...+.++.+++++|.+++.....
T Consensus 242 ~~-------------------~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~ 302 (460)
T d1z7xw1 242 GM-------------------AELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARL 302 (460)
T ss_dssp HH-------------------HHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHH
T ss_pred cc-------------------chhhcccccccccccccccccccccccccccccccccccccccccccccccccccccch
Confidence 00 001111222345667777777766422 1223445566777777777665322221
Q ss_pred c-----cccCccceeecCcCcCCCCCcc----cccCCCccceecccCcccCCC----Cchhhc-cccccCceeccCcccC
Q 043316 529 F-----GSLTELQYLDLSANKLSSSIPK----SMGNLSKLHYLNLSNNQFNHK----IPTEFE-KLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 529 ~-----~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~----~~~~~~-~l~~L~~L~Ls~N~l~ 594 (1031)
+ .....|+.+++++|.++..... .+...++|++|+|++|+|++. +++.+. ..+.|+.|+|++|.|+
T Consensus 303 l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~ 382 (460)
T d1z7xw1 303 LCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 382 (460)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred hhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCC
Confidence 1 1234677777777776643322 223445677777777776532 222232 3455777777777776
Q ss_pred Cc----CCccccCcccchhhhcCCCccCCCCccc----cc-cCCcceEEecccccccC
Q 043316 595 GE----IPPQICNMESLEELNLSHNNLFDLIPGC----FE-EMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 595 ~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~----~~-~l~~L~~L~l~~N~l~~ 643 (1031)
+. ++..+..+++|++|+|++|+|+...... +. ....|+.|++++|.+..
T Consensus 383 ~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 383 DSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp HHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred hHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence 32 3334555677777777777776532222 21 22357777777776653
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.73 E-value=1.7e-18 Score=175.32 Aligned_cols=181 Identities=25% Similarity=0.353 Sum_probs=111.6
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
.+..+.++.+.+++.++ ...+.++++|++++|.++ .++ .+..+++|++|++++|++++ +++ ++++++|++|+++
T Consensus 19 ~~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~ 92 (199)
T d2omxa2 19 EKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMN 92 (199)
T ss_dssp HHHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECC
T ss_pred HHHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccccC-ccc-ccCCccccccccc
Confidence 34445566666665443 345667777777777776 333 46667777777777777763 332 6677777777777
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCC
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 261 (1031)
+|.+. .+| .++++++|++|++++|.+... ..+..+++|+.|++++|++. .+| .+..+++|+.|++.+|++++..
T Consensus 93 ~n~~~-~~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~-~~~-~l~~~~~L~~L~l~~n~l~~l~ 166 (199)
T d2omxa2 93 NNQIA-DIT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTIS-DIS-ALSGLTSLQQLNFSSNQVTDLK 166 (199)
T ss_dssp SSCCC-CCG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCCCG
T ss_pred ccccc-ccc-ccccccccccccccccccccc--cccchhhhhHHhhhhhhhhc-ccc-cccccccccccccccccccCCc
Confidence 77665 444 366677777777777766532 23566666777777777665 233 4666666677777766666532
Q ss_pred CccccccccccccccccccccccCCcccccCCCCCee
Q 043316 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLM 298 (1031)
Q Consensus 262 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 298 (1031)
.++++++|++|++++|+++. ++ .++++++|+.|
T Consensus 167 --~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 167 --PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp --GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred --cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 35666666666666666653 32 35556666554
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.73 E-value=2.8e-18 Score=172.59 Aligned_cols=170 Identities=25% Similarity=0.261 Sum_probs=84.6
Q ss_pred eeeccCcccCCCCCCcccccccccEEEeccccccccc-CcccccccccccccccccccccccCccccccCcccEEEeecC
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSI-PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN 255 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 255 (1031)
++++++++++ .||..+. +++++|+|++|+|++.+ +..|+++++|++|+|++|++++..+..+..+++|++|+|++|
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 3444455544 4444442 44555555555554333 334455555555555555555555555555555555555555
Q ss_pred cCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcc
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 335 (1031)
+++++.|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+..... ...-...++.+.+..|.++...|.
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p~ 167 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSST
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCCh
Confidence 5555555555555555556666665555555555556666666666665543211 111122344445555555444443
Q ss_pred cccccccCceEEcccCCC
Q 043316 336 SIGNLSSLRTLYLYDNGF 353 (1031)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l 353 (1031)
.+ ..++.++|+.|.+
T Consensus 168 ~l---~~~~l~~L~~n~l 182 (192)
T d1w8aa_ 168 KV---RDVQIKDLPHSEF 182 (192)
T ss_dssp TT---TTSBGGGSCTTTC
T ss_pred hh---cCCEeeecCHhhC
Confidence 32 2333444444444
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.71 E-value=1.7e-17 Score=169.33 Aligned_cols=166 Identities=30% Similarity=0.423 Sum_probs=140.5
Q ss_pred CCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 99 SFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
.+..|++|++++|.+++ ++ .+..+++|++|+|++|++++ ++ .++.+++|++|++++|+++ .+| .++.+++|+.|
T Consensus 44 ~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L 117 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSL 117 (210)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEE
T ss_pred HhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc-ccc-ccccccccccc
Confidence 45678999999999984 44 38889999999999999985 44 4788999999999999998 466 58899999999
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
++++|.+. .++ .+.++++|+.+++++|.+++ +..++.+++|+++++++|++++ ++ .+.++++|++|+|++|+++
T Consensus 118 ~l~~~~~~-~~~-~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~ 191 (210)
T d1h6ta2 118 SLEHNGIS-DIN-GLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHIS 191 (210)
T ss_dssp ECTTSCCC-CCG-GGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC
T ss_pred cccccccc-ccc-cccccccccccccccccccc--cccccccccccccccccccccc-cc-cccCCCCCCEEECCCCCCC
Confidence 99999987 444 68889999999999999874 3457889999999999999985 44 3889999999999999998
Q ss_pred CCCCcccccccccccccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSE 278 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~ 278 (1031)
.. | .+.++++|++|+|++
T Consensus 192 ~l-~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 192 DL-R-ALAGLKNLDVLELFS 209 (210)
T ss_dssp BC-G-GGTTCTTCSEEEEEE
T ss_pred CC-h-hhcCCCCCCEEEccC
Confidence 64 4 589999999999975
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.68 E-value=1.4e-16 Score=161.03 Aligned_cols=184 Identities=26% Similarity=0.372 Sum_probs=125.9
Q ss_pred ChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceE
Q 043316 315 NLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLV 394 (1031)
Q Consensus 315 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 394 (1031)
++.+...+.++.+.+++.++ ...++++++|++++|.++.. +.+..+++|++|++++|++++..| ++++++|++|
T Consensus 16 ~l~~~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L 89 (199)
T d2omxa2 16 ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDI 89 (199)
T ss_dssp HHHHHHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HHHHHHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCccc--ccCCcccccc
Confidence 45666677788888776543 35678888999999888754 347788888888888888876543 7888888888
Q ss_pred eccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccC
Q 043316 395 NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIY 474 (1031)
Q Consensus 395 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~ 474 (1031)
++++|.+.... .+.+++.|+.|++++|.+.... .+..+++|+.|++++|++..+
T Consensus 90 ~l~~n~~~~~~--~l~~l~~L~~L~l~~~~~~~~~--~~~~l~~L~~L~l~~n~l~~~---------------------- 143 (199)
T d2omxa2 90 LMNNNQIADIT--PLANLTNLTGLTLFNNQITDID--PLKNLTNLNRLELSSNTISDI---------------------- 143 (199)
T ss_dssp ECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCC----------------------
T ss_pred ccccccccccc--cccccccccccccccccccccc--ccchhhhhHHhhhhhhhhccc----------------------
Confidence 88888776653 3667777777777777665443 355666777777776665432
Q ss_pred CCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCcccee
Q 043316 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYL 538 (1031)
Q Consensus 475 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 538 (1031)
+.+..+++|+.|++++|++++.. .++++++|+.|++++|++++ ++ .++.+++|++|
T Consensus 144 ----~~l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 144 ----SALSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp ----GGGTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred ----ccccccccccccccccccccCCc--cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 23555666777777777776432 36667777777777777764 32 46666777664
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=2.3e-16 Score=168.92 Aligned_cols=215 Identities=20% Similarity=0.203 Sum_probs=91.5
Q ss_pred ccccceEEEeeccccCCC-CCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccc-ccccc-cCccccccccc
Q 043316 147 HLTCLRMLYFDVNHLHGS-IPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNN-SLFGS-IPNVMGNLNSL 223 (1031)
Q Consensus 147 ~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L 223 (1031)
...+|++||++++.+++. ++..+.++++|++|+|++|.++...+..++++++|++|++++| .++.. +...+.++++|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 334555555555544422 2233444555555555555554444444555555555555553 23211 11122344455
Q ss_pred cccccccc-cccc-ccCccccc-cCcccEEEeecC--cCCCC-CCccccccccccccccccc-cccccCCcccccCCCCC
Q 043316 224 SILDLSQN-QLRG-SIPFSLAN-LSNLGILYLYKN--SLFGF-IPSVIGNLKSLFELDLSEN-QLFGSIPLSFSNLSSLT 296 (1031)
Q Consensus 224 ~~L~L~~N-~l~~-~~p~~l~~-l~~L~~L~L~~N--~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~ 296 (1031)
++|+++++ .++. .++..+.. .++|+.|+++++ .++.. +...+.++++|++|++++| .+++.....+.++++|+
T Consensus 124 ~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~ 203 (284)
T d2astb2 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 203 (284)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred cccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCC
Confidence 55555543 2221 11111222 234555555432 12111 1112233444444444443 23333333444444444
Q ss_pred eeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccc
Q 043316 297 LMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNH 376 (1031)
Q Consensus 297 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 376 (1031)
+|+|++| +.+++.....++++++|++|+++++--.+.++.... .+..|.+..++
T Consensus 204 ~L~L~~C-----------------------~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~---~lp~L~i~~~~ 257 (284)
T d2astb2 204 HLSLSRC-----------------------YDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKE---ALPHLQINCSH 257 (284)
T ss_dssp EEECTTC-----------------------TTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHH---HSTTSEESCCC
T ss_pred EEECCCC-----------------------CCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHH---hCccccccCcc
Confidence 4444442 123333334455667777777766621111111112 23344456666
Q ss_pred cCCCccccccC
Q 043316 377 LSGVIPHSIGN 387 (1031)
Q Consensus 377 l~~~~p~~~~~ 387 (1031)
++...++.+++
T Consensus 258 ls~~~~~~~~~ 268 (284)
T d2astb2 258 FTTIARPTIGN 268 (284)
T ss_dssp SCCTTCSSCSS
T ss_pred CCCCCCCccCc
Confidence 66655555554
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=2.3e-16 Score=168.82 Aligned_cols=219 Identities=18% Similarity=0.129 Sum_probs=129.2
Q ss_pred ccCcccCceeeccCcccCCC-CCCcccccccccEEEecccccccccCccccccccccccccccc-ccccc-cCccccccC
Q 043316 169 IGKLSLINVLTLCHNNFSGR-IPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQN-QLRGS-IPFSLANLS 245 (1031)
Q Consensus 169 ~~~l~~L~~L~L~~n~l~~~-ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~ 245 (1031)
.....+|++|||++|.++.. ++..+.++++|++|+|++|.+++..+..++.+++|++|+|+++ .++.. +..-...++
T Consensus 42 ~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~ 121 (284)
T d2astb2 42 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121 (284)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHH
Confidence 34556777777777776633 3344566777777777777776666666777777777777774 44421 122234566
Q ss_pred cccEEEeecC-cCCCC-CCccccc-ccccccccccccc--cccc-CCcccccCCCCCeeeeccCccCCCCCCCCCChhhh
Q 043316 246 NLGILYLYKN-SLFGF-IPSVIGN-LKSLFELDLSENQ--LFGS-IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEAL 319 (1031)
Q Consensus 246 ~L~~L~L~~N-~l~~~-~p~~~~~-l~~L~~L~Ls~N~--l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 319 (1031)
+|++|+++++ .++.. ++..+.. .++|+.|+++++. ++.. +...+.++++|++|++++|.
T Consensus 122 ~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~--------------- 186 (284)
T d2astb2 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV--------------- 186 (284)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT---------------
T ss_pred hccccccccccccccccchhhhcccccccchhhhccccccccccccccccccccccccccccccc---------------
Confidence 6777776664 23211 1111222 2455666655431 2211 11122344455555544432
Q ss_pred hhhhccccccCCCCcccccccccCceEEcccC-CCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccC
Q 043316 320 SELGLYINQLDGVIPPSIGNLSSLRTLYLYDN-GFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398 (1031)
Q Consensus 320 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 398 (1031)
.+++.....++++++|++|+|++| .+++.....++.+++|+.|+++++--.+.++.....+++|+ +..
T Consensus 187 --------~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L~---i~~ 255 (284)
T d2astb2 187 --------MLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQ---INC 255 (284)
T ss_dssp --------TCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTTSE---ESC
T ss_pred --------CCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCcccc---ccC
Confidence 244455667888999999999995 67777677788999999999999822222232334566655 567
Q ss_pred cccCCcCchhccCCc
Q 043316 399 NHLFGLIPKSFRNLT 413 (1031)
Q Consensus 399 N~l~~~~~~~~~~l~ 413 (1031)
++++...+..+.+..
T Consensus 256 ~~ls~~~~~~~~~~~ 270 (284)
T d2astb2 256 SHFTTIARPTIGNKK 270 (284)
T ss_dssp CCSCCTTCSSCSSTT
T ss_pred ccCCCCCCCccCccc
Confidence 778777666665443
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=1.1e-14 Score=133.88 Aligned_cols=99 Identities=28% Similarity=0.447 Sum_probs=45.9
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 184 (1031)
+|||++|+++ .+| .+.++++|++||+++|+++ .+|+.++.+++|++|++++|+++ .+| .++.+++|++|++++|+
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCc
Confidence 4555555554 333 2555555555555555554 34444555555555555555554 232 24444444444444444
Q ss_pred cCCCCC--CcccccccccEEEeccccc
Q 043316 185 FSGRIP--PSLGNLSNLAYLYLNNNSL 209 (1031)
Q Consensus 185 l~~~ip--~~~~~l~~L~~L~l~~n~l 209 (1031)
++ .+| ..++.+++|++|++++|.+
T Consensus 77 i~-~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 77 LQ-QSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CC-SSSTTGGGGGCTTCCEEECTTSGG
T ss_pred cC-CCCCchhhcCCCCCCEEECCCCcC
Confidence 44 122 2334444444444444444
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=1.4e-14 Score=133.06 Aligned_cols=118 Identities=25% Similarity=0.319 Sum_probs=98.3
Q ss_pred cEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccc
Q 043316 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNN 207 (1031)
Q Consensus 128 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n 207 (1031)
|+|||++|+++ .+| .++++++|++|++++|+++ .+|+.++.+++|++|++++|.++ .+| .++++++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence 68999999998 666 4899999999999999998 78989999999999999999998 566 5999999999999999
Q ss_pred cccccc-Cccccccccccccccccccccccc--Cc-cccccCcccEE
Q 043316 208 SLFGSI-PNVMGNLNSLSILDLSQNQLRGSI--PF-SLANLSNLGIL 250 (1031)
Q Consensus 208 ~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~--p~-~l~~l~~L~~L 250 (1031)
+++... +..++.+++|++|++++|.++... +. ....+++|+.|
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 998432 256889999999999999997421 22 33446777665
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=9.6e-15 Score=141.26 Aligned_cols=87 Identities=24% Similarity=0.240 Sum_probs=39.9
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCccccccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~ 200 (1031)
+.++.+|++|||++|+|+ .+|..+..+++|++|+|++|+++ .++ .+..+++|++|+|++|+++...|..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence 344445555555555554 33443444445555555555444 332 244444455555555554422222233444555
Q ss_pred EEEecccccc
Q 043316 201 YLYLNNNSLF 210 (1031)
Q Consensus 201 ~L~l~~n~l~ 210 (1031)
+|++++|+++
T Consensus 91 ~L~L~~N~i~ 100 (162)
T d1a9na_ 91 ELILTNNSLV 100 (162)
T ss_dssp EEECCSCCCC
T ss_pred cceecccccc
Confidence 5555555443
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=6.2e-15 Score=142.63 Aligned_cols=123 Identities=19% Similarity=0.146 Sum_probs=65.9
Q ss_pred cCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceecc
Q 043316 510 SLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLS 589 (1031)
Q Consensus 510 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 589 (1031)
++++|+|++|+|+ .++..+..+++|+.|+|++|+|+. + +.|..+++|++|++++|+|+...+..+..+++|+.|+++
T Consensus 19 ~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 19 RDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 95 (162)
T ss_dssp SCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred cCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-c-CCcccCcchhhhhcccccccCCCccccccccccccceec
Confidence 3344444444443 223334445555555555555552 2 235555666666666666655444455556666666666
Q ss_pred CcccCCcCC-ccccCcccchhhhcCCCccCCCC---ccccccCCcceEEe
Q 043316 590 HNFLQGEIP-PQICNMESLEELNLSHNNLFDLI---PGCFEEMRSLSRID 635 (1031)
Q Consensus 590 ~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~ 635 (1031)
+|+|+.... ..+..+++|++|++++|+++... +..+..+|+|+.||
T Consensus 96 ~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 96 NNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp SCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 666653211 34556666666666666665542 12455677777765
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.45 E-value=3.2e-15 Score=165.07 Aligned_cols=69 Identities=17% Similarity=0.106 Sum_probs=35.9
Q ss_pred ccccccccCceEEcccCCCcCc----cCCccCcccccceEEccccccCCCc----------cccccCCCCCceEeccCcc
Q 043316 335 PSIGNLSSLRTLYLYDNGFYGL----VPNEIGYLKSLSKLELCRNHLSGVI----------PHSIGNLTKLVLVNMCENH 400 (1031)
Q Consensus 335 ~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----------p~~~~~l~~L~~L~l~~N~ 400 (1031)
..+....+|+.|+|++|.+... +...+...++|+.|+++++...... ...+..+++|+.|++++|.
T Consensus 25 ~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~ 104 (344)
T d2ca6a1 25 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 104 (344)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc
Confidence 3455566677777777766432 2223455566777777665543211 1223334555555555555
Q ss_pred cCC
Q 043316 401 LFG 403 (1031)
Q Consensus 401 l~~ 403 (1031)
+..
T Consensus 105 i~~ 107 (344)
T d2ca6a1 105 FGP 107 (344)
T ss_dssp CCT
T ss_pred ccc
Confidence 543
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.43 E-value=3.6e-15 Score=164.63 Aligned_cols=242 Identities=17% Similarity=0.164 Sum_probs=147.7
Q ss_pred cccccCCCCCceEeccCcccCCcCc----hhccCCccccceecccccccccc----------ccccCCCCCCCeeccccc
Q 043316 382 PHSIGNLTKLVLVNMCENHLFGLIP----KSFRNLTSLERLRFNQNNLFGKV----------YEAFGDHPNLTFLDLSQN 447 (1031)
Q Consensus 382 p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~----------~~~~~~l~~L~~L~Ls~N 447 (1031)
...+.....|++|+|++|.+..... ..+...++|+.++++++...... ...+...++|+.|+|++|
T Consensus 24 ~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 24 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc
Confidence 4456677888888888887754332 23455667777777765432211 223445566666666666
Q ss_pred cccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhh-------------hhccccCcee
Q 043316 448 NLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-------------FEKLFSLNKL 514 (1031)
Q Consensus 448 ~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-------------~~~l~~L~~L 514 (1031)
.+.......+ ...+...++|++|++++|.+....... ....+.|+.+
T Consensus 104 ~i~~~~~~~l--------------------~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l 163 (344)
T d2ca6a1 104 AFGPTAQEPL--------------------IDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSI 163 (344)
T ss_dssp CCCTTTHHHH--------------------HHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred ccccccccch--------------------hhhhcccccchheecccccccccccccccccccccccccccccCccccee
Confidence 6554322111 112234566777777777664211111 1234567777
Q ss_pred ecccccccCCC----cccccccCccceeecCcCcCCCC-----CcccccCCCccceecccCcccCCC----Cchhhcccc
Q 043316 515 ILNLNQLSGGV----PLEFGSLTELQYLDLSANKLSSS-----IPKSMGNLSKLHYLNLSNNQFNHK----IPTEFEKLI 581 (1031)
Q Consensus 515 ~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~ 581 (1031)
.+++|+++... ...+...+.|++|+|++|+++.. +...+..+++|++|+|++|.++.. +...+..++
T Consensus 164 ~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~ 243 (344)
T d2ca6a1 164 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 243 (344)
T ss_dssp ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred ecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccc
Confidence 77777776322 22345567788888888887632 234466678888888888887533 345567778
Q ss_pred ccCceeccCcccCCcCCccc----c--CcccchhhhcCCCccCCCC----ccccc-cCCcceEEecccccccC
Q 043316 582 HLSELDLSHNFLQGEIPPQI----C--NMESLEELNLSHNNLFDLI----PGCFE-EMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 582 ~L~~L~Ls~N~l~~~~p~~~----~--~l~~L~~L~L~~N~l~~~~----~~~~~-~l~~L~~L~l~~N~l~~ 643 (1031)
+|++|+|++|.|++.....+ . ....|++|++++|+|+... ...+. +.++|+.|++++|++..
T Consensus 244 ~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 244 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred cchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 88888888888875422222 2 2356888888888886532 22232 46789999999998854
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.40 E-value=5.3e-15 Score=148.41 Aligned_cols=113 Identities=23% Similarity=0.324 Sum_probs=62.1
Q ss_pred CCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccc
Q 043316 116 NIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGN 195 (1031)
Q Consensus 116 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~ 195 (1031)
.+|..++.+++|++|+|++|+|+ .++ .+..+++|++|+|++|+++ .+|..+..+++|++|++++|+++ .++ .+.+
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~~ 113 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIEK 113 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH-HHHH
T ss_pred hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccc-ccc-cccc
Confidence 34555666666666666666666 343 3666666666666666665 45544444455555555555555 232 2455
Q ss_pred cccccEEEecccccccccC--cccccccccccccccccccc
Q 043316 196 LSNLAYLYLNNNSLFGSIP--NVMGNLNSLSILDLSQNQLR 234 (1031)
Q Consensus 196 l~~L~~L~l~~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~ 234 (1031)
+++|++|++++|+++. ++ ..++.+++|++|+|++|.+.
T Consensus 114 l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 114 LVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSSHHH
T ss_pred cccccccccccchhcc-ccccccccCCCccceeecCCCccc
Confidence 5555555555555542 22 23445555555555555544
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.40 E-value=6.9e-15 Score=147.57 Aligned_cols=114 Identities=21% Similarity=0.309 Sum_probs=69.4
Q ss_pred CCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccc
Q 043316 140 VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGN 219 (1031)
Q Consensus 140 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 219 (1031)
.+|.+++.|++|++|+|++|+++ .++ .+..+++|++|+|++|.++ .+|..+..+++|++|++++|+++. ++ .+.+
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~ 113 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEK 113 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHH
T ss_pred hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-cccc
Confidence 34556677777777777777776 454 4666666777777777665 556555555566666666666652 32 3556
Q ss_pred ccccccccccccccccccC--ccccccCcccEEEeecCcCCC
Q 043316 220 LNSLSILDLSQNQLRGSIP--FSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 220 l~~L~~L~L~~N~l~~~~p--~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
+++|++|+|++|+++. ++ ..+..+++|+.|+|++|.+..
T Consensus 114 l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 114 LVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp HHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred cccccccccccchhcc-ccccccccCCCccceeecCCCcccc
Confidence 6666666666666652 22 245556666666666665543
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=3.4e-12 Score=122.13 Aligned_cols=104 Identities=23% Similarity=0.186 Sum_probs=52.0
Q ss_pred cEEEeeCCcccCCChhhhhccccCceeecccc-cccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccC
Q 043316 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLN-QLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566 (1031)
Q Consensus 488 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 566 (1031)
+.++.+++.+. ..|..+..+++|++|++++| .|+...+..|.++++|+.|+|++|+|+.+.+.+|..+++|++|+|++
T Consensus 11 ~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 11 SGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp SCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC
Confidence 34555555554 23444444555555555433 24444444455555555555555555544455555555555555555
Q ss_pred cccCCCCchhhccccccCceeccCccc
Q 043316 567 NQFNHKIPTEFEKLIHLSELDLSHNFL 593 (1031)
Q Consensus 567 N~l~~~~~~~~~~l~~L~~L~Ls~N~l 593 (1031)
|+|+...+..|..+ +|+.|+|++|.+
T Consensus 90 N~l~~l~~~~~~~~-~l~~L~L~~Np~ 115 (156)
T d2ifga3 90 NALESLSWKTVQGL-SLQELVLSGNPL 115 (156)
T ss_dssp SCCSCCCSTTTCSC-CCCEEECCSSCC
T ss_pred CCCcccChhhhccc-cccccccCCCcc
Confidence 55554444444332 455555555554
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=1.4e-11 Score=117.74 Aligned_cols=93 Identities=19% Similarity=0.135 Sum_probs=50.4
Q ss_pred CccccccCCcCcEeeCCCC-cccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccc
Q 043316 117 IPPQISNLSKLRALDLGNN-QLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGN 195 (1031)
Q Consensus 117 ~p~~~~~l~~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~ 195 (1031)
+|..+..+++|++|++++| .++..-+..|.++++|+.|+|++|+++..-|..|..+++|++|+|++|+++ .+|.....
T Consensus 23 ~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~ 101 (156)
T d2ifga3 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQ 101 (156)
T ss_dssp TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTC
T ss_pred CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhc
Confidence 3444444555555555443 344333344555555555555555555333445566666666666666666 45444433
Q ss_pred cccccEEEecccccc
Q 043316 196 LSNLAYLYLNNNSLF 210 (1031)
Q Consensus 196 l~~L~~L~l~~n~l~ 210 (1031)
..+|++|+|++|.+.
T Consensus 102 ~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 102 GLSLQELVLSGNPLH 116 (156)
T ss_dssp SCCCCEEECCSSCCC
T ss_pred cccccccccCCCccc
Confidence 445777777777664
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=1.8e-09 Score=103.59 Aligned_cols=107 Identities=29% Similarity=0.225 Sum_probs=66.9
Q ss_pred cCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCC--chhhccccccCceeccCcccCCcCCccccCcccchh
Q 043316 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKI--PTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEE 609 (1031)
Q Consensus 532 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 609 (1031)
+..+..++..+|... .++..+..++.|++|+|++|+|+... +..+..+++|+.|||++|+|+...+-.+....+|+.
T Consensus 41 ~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~ 119 (162)
T d1koha1 41 QNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEE 119 (162)
T ss_dssp TTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSS
T ss_pred ccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccce
Confidence 333444444444333 33444455677777777777776543 345677788888888888887544334444556888
Q ss_pred hhcCCCccCCCCcc-------ccccCCcceEEecccccc
Q 043316 610 LNLSHNNLFDLIPG-------CFEEMRSLSRIDIAYNEL 641 (1031)
Q Consensus 610 L~L~~N~l~~~~~~-------~~~~l~~L~~L~l~~N~l 641 (1031)
|++++|++...... .+..+|+|+.|| |+++
T Consensus 120 L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD--g~~v 156 (162)
T d1koha1 120 LWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD--GHEL 156 (162)
T ss_dssp CCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET--TEEC
T ss_pred eecCCCCcCcCcccchhHHHHHHHHCCCCCEEC--cCCC
Confidence 88888888765432 256688888876 5554
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.55 E-value=4.5e-09 Score=100.68 Aligned_cols=90 Identities=26% Similarity=0.225 Sum_probs=52.6
Q ss_pred cccccccCccceeecCcCcCCCCC--cccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCc----
Q 043316 526 PLEFGSLTELQYLDLSANKLSSSI--PKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPP---- 599 (1031)
Q Consensus 526 ~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~---- 599 (1031)
+..+..+++|++|+|++|+|+... +..+..+++|+.|+|++|+|+...+-.+.+..+|+.|++++|.+......
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y 137 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTY 137 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHH
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhH
Confidence 334445666677777777666432 33455667777777777777654443444445677777777777644332
Q ss_pred ---cccCcccchhhhcCCCcc
Q 043316 600 ---QICNMESLEELNLSHNNL 617 (1031)
Q Consensus 600 ---~~~~l~~L~~L~L~~N~l 617 (1031)
.+..+++|+.|| |+.+
T Consensus 138 ~~~i~~~~P~L~~LD--g~~v 156 (162)
T d1koha1 138 ISAIRERFPKLLRLD--GHEL 156 (162)
T ss_dssp HHHHHTTSTTCCEET--TEEC
T ss_pred HHHHHHHCCCCCEEC--cCCC
Confidence 244567777654 4444
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.38 E-value=7.8e-07 Score=92.34 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=103.9
Q ss_pred HHHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEec
Q 043316 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSN 830 (1031)
Q Consensus 752 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~ 830 (1031)
+++.+....|+..+..+.++.+.||+... +++.++||+...... .....+.+|...+..+. +--+.+++++..+
T Consensus 7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~----~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~ 81 (263)
T d1j7la_ 7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYK----GTTYDVEREKDMMLWLEGKLPVPKVLHFERH 81 (263)
T ss_dssp HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGT----TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE
T ss_pred HHHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcc----cchhhHHHHHHHHHHHhccCCCCcEEEEEec
Confidence 46677777887766655555678999875 566778888755431 22334567877776664 4346788888888
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC----------------------------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC---------------------------- 882 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------- 882 (1031)
++..++||++++|.++.+..... .....++.++++.++.||+..
T Consensus 82 ~~~~~lv~~~l~G~~~~~~~~~~--------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (263)
T d1j7la_ 82 DGWSNLLMSEADGVLCSEEYEDE--------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADV 153 (263)
T ss_dssp TTEEEEEEECCSSEEHHHHTTTC--------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCC
T ss_pred CCceEEEEEeccccccccccccc--------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhh
Confidence 89999999999998776544321 122345666666677776421
Q ss_pred ----------------------------CCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 883 ----------------------------LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 883 ----------------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
.+.++|+|+.|.||++++++.+.|+||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 154 DCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 12378999999999998776677999987764
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.87 E-value=1.1e-05 Score=82.82 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=86.1
Q ss_pred eeecCCC-ccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC--CCceeeeeeeEecCCeeEEEEEecc
Q 043316 766 CIGKGRQ-GSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR--HRNIIKFHGFCSNAQHSFIVSEYLD 842 (1031)
Q Consensus 766 ~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~ 842 (1031)
.+..|.. +.||+....++..+++|...... ...+.+|...++.+. .-.+.+++++..+++..++||++++
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~-------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~ 89 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 89 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT-------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC-------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeee
Confidence 3455554 57899988888889999865432 123456666665553 3346778888888889999999999
Q ss_pred CCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC-----------------------------------------
Q 043316 843 RGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD----------------------------------------- 881 (1031)
Q Consensus 843 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------- 881 (1031)
|.++.+... . ....+.++++.++-||+.
T Consensus 90 G~~~~~~~~--------~---~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (255)
T d1nd4a_ 90 GQDLLSSHL--------A---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 158 (255)
T ss_dssp SEETTTSCC--------C---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred ccccccccc--------c---HHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHH
Confidence 876643211 0 011223344444444421
Q ss_pred --------------CCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 882 --------------CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 882 --------------~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
..+.++|+|+.|.||+++.+..+-|+||+.+..
T Consensus 159 ~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~ 205 (255)
T d1nd4a_ 159 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 205 (255)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence 112479999999999999876678999987764
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.61 E-value=1.2e-05 Score=76.64 Aligned_cols=109 Identities=12% Similarity=0.105 Sum_probs=55.7
Q ss_pred CCCCcEEEeeCC-cccCC----ChhhhhccccCceeecccccccCC----CcccccccCccceeecCcCcCCCC----Cc
Q 043316 484 SSKLQVLDLSSN-HIVGK----IPVQFEKLFSLNKLILNLNQLSGG----VPLEFGSLTELQYLDLSANKLSSS----IP 550 (1031)
Q Consensus 484 l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p 550 (1031)
.++|++|+|+++ .+... +-..+...+.|+.|+|++|.++.. +...+...+.|++|+|++|.+++. +-
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 356677777653 34321 122334445566666666665522 222333446666667766666532 12
Q ss_pred ccccCCCccceecccCcccCCC-------CchhhccccccCceeccCcc
Q 043316 551 KSMGNLSKLHYLNLSNNQFNHK-------IPTEFEKLIHLSELDLSHNF 592 (1031)
Q Consensus 551 ~~~~~l~~L~~L~Ls~N~l~~~-------~~~~~~~l~~L~~L~Ls~N~ 592 (1031)
..+...+.|++|+|++|.+... +...+...+.|+.|+++.+.
T Consensus 94 ~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 2344555666666666654432 23334445556666665543
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.60 E-value=7.1e-06 Score=78.17 Aligned_cols=86 Identities=22% Similarity=0.239 Sum_probs=43.1
Q ss_pred cCCCccceecccCcccCC----CCchhhccccccCceeccCcccCCc----CCccccCcccchhhhcCCCccCCCC----
Q 043316 554 GNLSKLHYLNLSNNQFNH----KIPTEFEKLIHLSELDLSHNFLQGE----IPPQICNMESLEELNLSHNNLFDLI---- 621 (1031)
Q Consensus 554 ~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~---- 621 (1031)
...+.|++|+|++|.+.. .+.+.+...+.|++|+|++|.|++. +-..+...++|++|+|++|.+..+.
T Consensus 41 ~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~ 120 (167)
T d1pgva_ 41 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 120 (167)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred hhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHH
Confidence 334445555555554432 1223344445566666666655532 1223444556666666666554331
Q ss_pred ---ccccccCCcceEEecccc
Q 043316 622 ---PGCFEEMRSLSRIDIAYN 639 (1031)
Q Consensus 622 ---~~~~~~l~~L~~L~l~~N 639 (1031)
...+...++|+.|+++++
T Consensus 121 ~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 121 MDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHHHhCCCccEeeCcCC
Confidence 233444566777776554
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.16 E-value=0.00059 Score=74.20 Aligned_cols=81 Identities=16% Similarity=0.002 Sum_probs=49.1
Q ss_pred cceeecCCCccEEEEEeCC-CcEEEEEEccchhh--hh-hhhcHHHHHHHHHHHhcCC-C--CceeeeeeeEecCCeeEE
Q 043316 764 KYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLL--FD-EMADQDEFLNEVLALTEIR-H--RNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~-~~~~~~~~~~Ei~~l~~l~-h--~niv~l~~~~~~~~~~~l 836 (1031)
.+.||.|....||++...+ ++.++||.-..... .+ .....++...|.+.++.+. + ..+.+++.+. +...++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence 3468999999999997654 67899997533111 01 1123344556777776652 2 3456666553 445679
Q ss_pred EEEeccCCCc
Q 043316 837 VSEYLDRGSL 846 (1031)
Q Consensus 837 v~e~~~~gsL 846 (1031)
|||++++..+
T Consensus 109 vmE~L~~~~~ 118 (392)
T d2pula1 109 VMEDLSHLKI 118 (392)
T ss_dssp EECCCTTSEE
T ss_pred EEeccCCccc
Confidence 9999976543
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.96 E-value=5.4e-05 Score=71.80 Aligned_cols=87 Identities=15% Similarity=0.234 Sum_probs=42.8
Q ss_pred cCCCccceecccCcccCCC----CchhhccccccCceeccCcccCCc----CCccccCcccchh--hhcCCCccCCC---
Q 043316 554 GNLSKLHYLNLSNNQFNHK----IPTEFEKLIHLSELDLSHNFLQGE----IPPQICNMESLEE--LNLSHNNLFDL--- 620 (1031)
Q Consensus 554 ~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~--L~L~~N~l~~~--- 620 (1031)
...+.|++|+|++|.++.. +...+...+.++.+++++|.+... +...+...++|+. |++++|.+...
T Consensus 43 ~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~ 122 (166)
T d1io0a_ 43 KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM 122 (166)
T ss_dssp TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH
T ss_pred hcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHH
Confidence 3444455555555544322 122334445566666666655432 2233444555554 33345555431
Q ss_pred -CccccccCCcceEEeccccc
Q 043316 621 -IPGCFEEMRSLSRIDIAYNE 640 (1031)
Q Consensus 621 -~~~~~~~l~~L~~L~l~~N~ 640 (1031)
+...+...++|++|++++|.
T Consensus 123 ~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 123 EIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHhCCCcCEEeCcCCC
Confidence 23344556777777776654
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.76 E-value=0.00015 Score=68.56 Aligned_cols=109 Identities=14% Similarity=0.144 Sum_probs=49.1
Q ss_pred CCCCcEEEeeC-CcccCC----ChhhhhccccCceeecccccccCCC----cccccccCccceeecCcCcCCCC----Cc
Q 043316 484 SSKLQVLDLSS-NHIVGK----IPVQFEKLFSLNKLILNLNQLSGGV----PLEFGSLTELQYLDLSANKLSSS----IP 550 (1031)
Q Consensus 484 l~~L~~L~Ls~-N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~p 550 (1031)
.++|++|+|++ +.|+.. +...+...+.|++|++++|.++... ...+...++++.+++++|.+... +.
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~ 95 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 95 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHH
Confidence 35566666665 334321 1122334455555555555554221 12233445566666666655421 12
Q ss_pred ccccCCCccce--ecccCcccCCC----CchhhccccccCceeccCcc
Q 043316 551 KSMGNLSKLHY--LNLSNNQFNHK----IPTEFEKLIHLSELDLSHNF 592 (1031)
Q Consensus 551 ~~~~~l~~L~~--L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~ 592 (1031)
..+...++|+. |++++|.+... +...+...+.|+.|+++.+.
T Consensus 96 ~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 96 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 33344455554 33334444321 23334445555555555443
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.71 E-value=0.0033 Score=66.19 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=76.8
Q ss_pred CccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc--eeeee-----eeEecCCeeEEEEEeccCC
Q 043316 772 QGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN--IIKFH-----GFCSNAQHSFIVSEYLDRG 844 (1031)
Q Consensus 772 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~-----~~~~~~~~~~lv~e~~~~g 844 (1031)
--.||+++.++|+.|++|+.+... ...+++..|+..+..+.... ++..+ ..+..++..+.++++++|.
T Consensus 35 EN~vy~v~~~dg~~~VlK~~rp~~-----~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~ 109 (325)
T d1zyla1 35 ENRVYQFQDEDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR 109 (325)
T ss_dssp SSEEEEECCTTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred cceeEEEEcCCCCEEEEEEeCCCC-----CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence 347999999999999999976532 23555667777776663211 11111 1234567788999999875
Q ss_pred Cchhh----c--------------ccC--CccccCCH-------------------HHHHHHHHHHHHHHHHhh----hC
Q 043316 845 SLTTI----L--------------KDD--AAAKEFGW-------------------NQRMNVIKGVANALSYLH----HD 881 (1031)
Q Consensus 845 sL~~~----l--------------~~~--~~~~~l~~-------------------~~~~~i~~~i~~~L~~LH----~~ 881 (1031)
.+... . ... ......++ .....+...+.+.++.+. +.
T Consensus 110 ~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 189 (325)
T d1zyla1 110 QFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRED 189 (325)
T ss_dssp ECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 43210 0 000 00001111 111112222223333332 22
Q ss_pred CCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 882 ~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
...++||+|+.+.||++++ + ..++||+.+..
T Consensus 190 ~p~~liHgDlh~~NvL~~~-~-~~~IDFdd~~~ 220 (325)
T d1zyla1 190 FTVLRLHGDCHAGNILWRD-G-PMFVDLDDARN 220 (325)
T ss_dssp SCCEECCSSCSGGGEEESS-S-EEECCCTTCCE
T ss_pred CCceeecCCCCcccEEEeC-C-ceEEechhccc
Confidence 2347899999999999974 3 46899998874
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.26 E-value=0.017 Score=60.11 Aligned_cols=159 Identities=9% Similarity=0.050 Sum_probs=83.4
Q ss_pred ccHHHHHHHHhccCcccee-----ecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-----C
Q 043316 749 FLYEEIIKAIDDFGEKYCI-----GKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-----H 818 (1031)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~l-----g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----h 818 (1031)
.+.+++.....+|..++.. ..|.--+.|+.+..+|+ +++|++..... .+....|++++..+. -
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~~------~~~l~~~~~~l~~L~~~g~pv 75 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRVE------KNDLPFFLGLMQHLAAKGLSC 75 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCCC------HHHHHHHHHHHHhhhhccccc
Confidence 4567788888889876543 35666778999876654 89999865321 122333444444442 2
Q ss_pred Cceeeeee---eEecCCeeEEEEEeccCCCchhhcc------------------cC--Cccc------------------
Q 043316 819 RNIIKFHG---FCSNAQHSFIVSEYLDRGSLTTILK------------------DD--AAAK------------------ 857 (1031)
Q Consensus 819 ~niv~l~~---~~~~~~~~~lv~e~~~~gsL~~~l~------------------~~--~~~~------------------ 857 (1031)
|..+...+ +....+....++.+..+......-. .. ....
T Consensus 76 p~pi~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
T d2ppqa1 76 PLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 155 (316)
T ss_dssp CCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred cccceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhh
Confidence 22222111 1233456677777776643321110 00 0000
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 858 EFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 858 ~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
..........+..+...+...+. ....|+||+|+.+.||+++.+...-|.||+.+..
T Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 156 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhcchhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence 00011111222222222222221 1234799999999999999888788999998863
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.12 E-value=0.008 Score=65.04 Aligned_cols=73 Identities=15% Similarity=0.169 Sum_probs=49.5
Q ss_pred cceeecCCCccEEEEEeCC--------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 764 KYCIGKGRQGSVYKAELPS--------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
.+.|+.|-.=.+|++...+ .+.|.+++.... .......+|..+++.+. +.-..++++++.+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~------~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~---- 116 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP------ETESHLVAESVIFTLLSERHLGPKLYGIFSG---- 116 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC------CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc------chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----
Confidence 3578889999999997644 356777765422 12334557888887774 4445678887754
Q ss_pred EEEEEeccCCCc
Q 043316 835 FIVSEYLDRGSL 846 (1031)
Q Consensus 835 ~lv~e~~~~gsL 846 (1031)
.+|+||++|..+
T Consensus 117 g~I~efi~g~~l 128 (395)
T d1nw1a_ 117 GRLEEYIPSRPL 128 (395)
T ss_dssp EEEECCCCEEEC
T ss_pred ceEEEEeccccC
Confidence 589999987654
|