Citrus Sinensis ID: 043321

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------
MPDSKFSIASPTHTSASDADMHSVKYVHTISEAGRFLPSASQWNSTEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHDPPRKSSNSASLNLGIDQTGIFDKIHSTPSNP
ccccccEEccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEcHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccHHHHcHHHHHHHHHHcccccccccccccccccccccccccccccccccc
cccccEEEEcccccccccccccccHEEccHcHHcccccccccccHHHHHHHHcccccHcccccHHHcccEEEcEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccEEEcccccccccccccccccccccEcccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccEEcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccEEccccHHHHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHcccccccEEcccccccEccccccccccccccEccccccccccccccccHHHHEccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccc
mpdskfsiaspthtsasdadmhSVKYVHTISeagrflpsasqwnsteidfnlapqssnsygslpsrysksfdydlvitdkAYFKRFLYISASAALLILALVLLIHfvphkhhphsptknLTLAVNQALTffdaqksgnypnyspvkfrgnsgmqdgkvsnlnadlvggfydsgnnikfsfptAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKvgstgndtkvsndincwqrpedmsyvrpvsvcdstasDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYevtsredpgrkqgiytkvdacggeardyynstsFIDELVWGGTWLFFATGNNSYLAYATERFKaaedeetesekgifywNNKLTATAVLLTRLRFFrdlgypyegalrssssrTEILMCSYLSDHifnktqgglillrpgsggalEFAATASFLSKLYSDYLDLLRrsggscgndgfsLQMLRRFSISQVHyilgdnpmkmsymvgfgdkypyqvhhrsasipwddgqhytcaegdrwlyskepnpnllvgamvagpdifdnfsderdkpwftepsiasNAGLVAALIAlhdpprkssnsaslnlgidqtgifdkihstpsnp
mpdskfsiaspthtsasdadmhSVKYVHTISEAGRFLPSASQWNSTEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVNQALTFfdaqksgnypNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGstgndtkvsndinCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLyevtsredpgrkqgiytKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFKAAEDeetesekgifywnnkLTATAVLLTRLRFFRDLGYPyegalrssssrTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHDPPRKSSNSASLNlgidqtgifdkihstpsnp
MPDSKFSIASPTHTSASDADMHSVKYVHTISEAGRFLPSASQWNSTEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFlyisasaallilalvlliHFVPHKHHPHSPTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFKAAEDEETESEKGIFYWNNKltatavlltrlrFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKlysdyldllrrsGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHDPPRKSSNSASLNLGIDQTGIFDKIHSTPSNP
************************KYVHTISEAGRFLP****W****I******************YSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVNQALTFFDAQKSGNYPNYS*V************VSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTS*****RKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFKA*********KGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALH********************************
***SKFS*****************KYVHTISEAGRFLP**SQWNSTEIDFNLA****************SFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALH********************************
*****************DADMHSVKYVHTISEAGRFLPSASQWNSTEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFK*********EKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHDPPRKSSNSASLNLGIDQTGIFDKIHSTPSNP
************************K***TISEAGRFLPSASQWNSTEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHDPP*****************************
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MPDSKFSIASPTHTSASDADMHSVKYVHTISEAGRFLPSASQWNSTEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHDPPRKSSNSASLNLGIDQTGIFDKIHSTPSNP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query617 2.2.26 [Sep-21-2011]
Q38890621 Endoglucanase 25 OS=Arabi yes no 0.871 0.866 0.451 1e-118
Q84R49620 Endoglucanase 10 OS=Oryza yes no 0.852 0.848 0.454 1e-117
O04478623 Endoglucanase 7 OS=Arabid no no 0.820 0.812 0.427 1e-114
P0C1U4619 Endoglucanase 9 OS=Oryza no no 0.737 0.735 0.479 1e-112
Q7XUK4623 Endoglucanase 12 OS=Oryza no no 0.857 0.849 0.415 1e-109
Q9STW8620 Endoglucanase 21 OS=Arabi no no 0.816 0.812 0.454 1e-108
Q9FXI9515 Endoglucanase 2 OS=Arabid no no 0.739 0.885 0.374 3e-76
Q69SG5528 Endoglucanase 24 OS=Oryza no no 0.716 0.837 0.392 3e-76
Q8L7I0 626 Endoglucanase 19 OS=Arabi no no 0.717 0.707 0.390 5e-76
Q8LCP6525 Endoglucanase 10 OS=Arabi no no 0.696 0.819 0.386 7e-74
>sp|Q38890|GUN25_ARATH Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE=1 SV=1 Back     alignment and function desciption
 Score =  426 bits (1096), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 262/580 (45%), Positives = 348/580 (60%), Gaps = 42/580 (7%)

Query: 55  QSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPH 114
           Q S   G    +  K  D   +I  +  F   +    +AALL   + L++  VP +HHP 
Sbjct: 44  QQSWLLGPTEQKKKKYVDLGCIIVSRKIFVWTVGTLVAAALLAGFITLIVKTVP-RHHPK 102

Query: 115 SPT-KNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGK--VSNLNADLVGGFYD 171
           +P   N T+A+++AL FF+AQKSG  P ++ V +RGNSG+QDGK    +   DLVGG+YD
Sbjct: 103 TPPPDNYTIALHKALKFFNAQKSGKLPKHNNVSWRGNSGLQDGKGETGSFYKDLVGGYYD 162

Query: 172 SGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKV-------- 223
           +G+ IKF+FP AYA+T+LSWSVIEY  KY   GEL HVK++IKWG+DY LK         
Sbjct: 163 AGDAIKFNFPMAYAMTMLSWSVIEYSAKYEAAGELTHVKELIKWGTDYFLKTFNSTADSI 222

Query: 224 ---------GSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASI 274
                    G+T +     ND  CW RPEDM Y RPV+ C+   SDLA E+ AAL++ASI
Sbjct: 223 DDLVSQVGSGNTDDGNTDPNDHYCWMRPEDMDYKRPVTTCNGGCSDLAAEMAAALASASI 282

Query: 275 VFKDEIMYSGELIKAAGKLYEVTSREDPGR-KQGIYTKVDACGGEARDYYNSTSFIDELV 333
           VFKD   YS +L+  A  +Y+       GR ++G Y+   A   E+  +YNS+ + DE +
Sbjct: 283 VFKDNKEYSKKLVHGAKVVYQF------GRTRRGRYS---AGTAESSKFYNSSMYWDEFI 333

Query: 334 WGGTWLFFATGNNSYLAYATE--RFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFR 391
           WGG W+++ATGN +YL   T+    K A         G+F W+NKL    +LL+RLR F 
Sbjct: 334 WGGAWMYYATGNVTYLNLITQPTMAKHAGAFWGGPYYGVFSWDNKLAGAQLLLSRLRLFL 393

Query: 392 DLGYPYEGALRSSSSRTEILMCSYLSD-HIFNKTQGGLILLRPGSGGALEFAATASFLSK 450
             GYPYE  LR+  ++T I+MCSYL   + FN+T GGLI L  G+   L+++  A+FL+ 
Sbjct: 394 SPGYPYEEILRTFHNQTSIVMCSYLPIFNKFNRTNGGLIELNHGAPQPLQYSVNAAFLAT 453

Query: 451 LYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVH 510
           LYSDYLD     G  CG + +S  +LR F+ SQ+ YILG NP KMSY+VGFG KYP  VH
Sbjct: 454 LYSDYLDAADTPGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVH 513

Query: 511 HRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPS 570
           HR ASIP  +   Y C  G +W  SK+PNPN + GAMVAGPD  D + D R    +TEP+
Sbjct: 514 HRGASIP-KNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPT 572

Query: 571 IASNAGLVAALIALHDPPRKSSNSASLNLGIDQTGIFDKI 610
           +A NAGLVAAL+AL       S        ID+  IF  +
Sbjct: 573 LAGNAGLVAALVAL-------SGEEEATGKIDKNTIFSAV 605
Required for cellulose microfibrils formation. Involved in cell wall assembly during cell elongation and cell plate maturation in cytokinesis. Required for secondary cell wall formation in the developing xylem. May cycle through different intracellular compartments, including plasma membrane.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q84R49|GUN10_ORYSJ Endoglucanase 10 OS=Oryza sativa subsp. japonica GN=GLU2 PE=2 SV=1 Back     alignment and function description
>sp|O04478|GUN7_ARATH Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1 Back     alignment and function description
>sp|P0C1U4|GUN9_ORYSJ Endoglucanase 9 OS=Oryza sativa subsp. japonica GN=GLU1 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUK4|GUN12_ORYSJ Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2 Back     alignment and function description
>sp|Q9STW8|GUN21_ARATH Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 PE=2 SV=1 Back     alignment and function description
>sp|Q9FXI9|GUN2_ARATH Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1 Back     alignment and function description
>sp|Q69SG5|GUN24_ORYSJ Endoglucanase 24 OS=Oryza sativa subsp. japonica GN=Os09g0533900 PE=2 SV=1 Back     alignment and function description
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|Q8LCP6|GUN10_ARATH Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75680 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query617
225457743624 PREDICTED: endoglucanase 10-like [Vitis 0.980 0.969 0.660 0.0
147768172613 hypothetical protein VITISV_036542 [Viti 0.951 0.957 0.625 0.0
255570384606 endo-1,4-beta-glucanase, putative [Ricin 0.951 0.968 0.644 0.0
449459374610 PREDICTED: endoglucanase 25-like [Cucumi 0.954 0.965 0.610 0.0
356518607609 PREDICTED: endoglucanase 25-like [Glycin 0.938 0.950 0.593 0.0
449527572610 PREDICTED: endoglucanase 25-like [Cucumi 0.954 0.965 0.608 0.0
34329342601 cellulase [Medicago truncatula] 0.923 0.948 0.587 0.0
357463767617 Endoglucanase [Medicago truncatula] gi|3 0.923 0.923 0.573 0.0
302142777505 unnamed protein product [Vitis vinifera] 0.737 0.900 0.644 1e-176
356577316630 PREDICTED: endoglucanase 7-like [Glycine 0.852 0.834 0.422 1e-124
>gi|225457743|ref|XP_002278065.1| PREDICTED: endoglucanase 10-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/636 (66%), Positives = 500/636 (78%), Gaps = 31/636 (4%)

Query: 1   MPDSKFSIASPTHTSASDADMHSVKYVHTISEAGRFLPSASQWNSTEIDFNLAPQSSNSY 60
           MP+S  S ++P      D D  SV++VH+I+EAGR LPSAS+WNS  ID+N+ P+SS +Y
Sbjct: 1   MPESIHSSSTP------DMDCSSVRFVHSINEAGRLLPSASRWNSIAIDYNVLPRSSIAY 54

Query: 61  GSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNL 120
            SLPS YSKS +++LV+ DK + KRF+YIS    L I+ALV+L+HF+PHKH  H  +KNL
Sbjct: 55  DSLPSVYSKSVEFNLVVRDKTHLKRFVYISVFLVLAIVALVVLLHFLPHKHGHHGSSKNL 114

Query: 121 TLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSF 180
           T A+NQALTFF+AQKSG  P  S V FRG+SG+QDG  S  N  LVGGFYDSGNNIKFSF
Sbjct: 115 THAINQALTFFEAQKSGYLPKNSSVSFRGDSGLQDGNSSGHN--LVGGFYDSGNNIKFSF 172

Query: 181 PTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLK------------------ 222
           PTAY +T+LSW+VIEY +KYA+IGEL HVKDIIKWGSDYLLK                  
Sbjct: 173 PTAYTITLLSWTVIEYHQKYADIGELEHVKDIIKWGSDYLLKLFIPPIKSTSSSTTILYS 232

Query: 223 -VGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIM 281
            VGST ND    ND+NCWQRPEDMSY+RPVS+C+STASDLAGEI+AALSAAS+VF+++  
Sbjct: 233 QVGSTSND--AFNDVNCWQRPEDMSYLRPVSICNSTASDLAGEIVAALSAASLVFREDTG 290

Query: 282 YSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFF 341
           YSGELIK A KL+E+ +  DP R QG YT+ DACGG+AR +YNS+ F DELVW GTWLFF
Sbjct: 291 YSGELIKGAEKLFELATAVDP-RMQGTYTRSDACGGQARQFYNSSGFEDELVWAGTWLFF 349

Query: 342 ATGNNSYLAYATERFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGAL 401
           ATGN +YL  ATE+F +AE EE  SEK IFYWNNK+TA AVLLTRLRFF D GYPY  AL
Sbjct: 350 ATGNTTYLRNATEKFASAETEEMPSEKWIFYWNNKITANAVLLTRLRFFLDPGYPYAAAL 409

Query: 402 RSSSSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRR 461
           + S++RT++LMCSYLS++IFN T GGLILLRP  G  L+FAATASFLSKLYSDYLDLLR+
Sbjct: 410 QPSTTRTDLLMCSYLSNYIFNNTPGGLILLRPDHGKPLQFAATASFLSKLYSDYLDLLRQ 469

Query: 462 SGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDG 521
           SGGSCG   ++L+ML+ FS+SQV+YILGDNPMKMSY+VGFGD YP  VHHRSASIPW DG
Sbjct: 470 SGGSCGGYNYTLEMLQSFSMSQVNYILGDNPMKMSYVVGFGDSYPIHVHHRSASIPW-DG 528

Query: 522 QHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAAL 581
             Y+C +GD+WL+S++PNPN L+GAMV GPD  D F D+R KPWFTEPSI+SNAGLVAAL
Sbjct: 529 HQYSCEDGDKWLHSEDPNPNTLLGAMVGGPDQHDKFLDDRKKPWFTEPSISSNAGLVAAL 588

Query: 582 IALHDPPRKSSNSASLNLGIDQTGIFDKIHSTPSNP 617
           IALHD P +SSNS  +  GID+ GIF  IHS PS P
Sbjct: 589 IALHDHPCESSNSNCVGSGIDKMGIFTNIHSFPSPP 624

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147768172|emb|CAN71528.1| hypothetical protein VITISV_036542 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255570384|ref|XP_002526151.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223534528|gb|EEF36227.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449459374|ref|XP_004147421.1| PREDICTED: endoglucanase 25-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356518607|ref|XP_003527970.1| PREDICTED: endoglucanase 25-like [Glycine max] Back     alignment and taxonomy information
>gi|449527572|ref|XP_004170784.1| PREDICTED: endoglucanase 25-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|34329342|gb|AAQ63883.1| cellulase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357463767|ref|XP_003602165.1| Endoglucanase [Medicago truncatula] gi|355491213|gb|AES72416.1| Endoglucanase [Medicago truncatula] Back     alignment and taxonomy information
>gi|302142777|emb|CBI19980.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356577316|ref|XP_003556773.1| PREDICTED: endoglucanase 7-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query617
TAIR|locus:2135997620 GH9A3 "glycosyl hydrolase 9A3" 0.758 0.754 0.455 1.2e-104
TAIR|locus:2034158623 KOR2 "KORRIGAN 2" [Arabidopsis 0.755 0.747 0.435 7.1e-100
TAIR|locus:2157022621 GH9A1 "glycosyl hydrolase 9A1" 0.846 0.840 0.395 4.5e-91
TAIR|locus:2035384515 GH9B5 "glycosyl hydrolase 9B5" 0.743 0.891 0.359 1.7e-73
TAIR|locus:2136073 626 GH9C3 "glycosyl hydrolase 9C3" 0.717 0.707 0.379 2.9e-71
TAIR|locus:2005599525 GH9B7 "glycosyl hydrolase 9B7" 0.727 0.855 0.361 6.1e-71
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.701 0.903 0.353 1e-68
TAIR|locus:2120232493 GH9B17 "glycosyl hydrolase 9B1 0.726 0.908 0.366 1.9e-67
TAIR|locus:2118519478 GH9B14 "glycosyl hydrolase 9B1 0.703 0.907 0.343 3.1e-67
TAIR|locus:2014205620 GH9C2 "glycosyl hydrolase 9C2" 0.722 0.719 0.371 4e-67
TAIR|locus:2135997 GH9A3 "glycosyl hydrolase 9A3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
 Identities = 228/501 (45%), Positives = 298/501 (59%)

Query:   107 VPHKHHPHSPTKNLTLAVNQALTFFDAQKSGNYP-NYSPVKFRGNSGMQDGK--VSNLNA 163
             +PH HH   P  N T+A+  AL FF+AQ+SG  P N   V +R +S +QDGK        
Sbjct:    96 LPHHHHKEPPPDNYTIALRTALKFFNAQQSGKLPKNIYNVSWRHDSCLQDGKGDPGQCYK 155

Query:   164 DLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLK- 222
             DLVGG+YD+G++IKF+FP +YA+T+LSWSVIEY  KY   GEL HVK++IKWG+DY LK 
Sbjct:   156 DLVGGYYDAGDSIKFNFPMSYAMTMLSWSVIEYSAKYQAAGELEHVKELIKWGTDYFLKT 215

Query:   223 --------------VGS--TGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEII 266
                           VGS  +G  +++ ND  CW RPED+ Y R VS C S+ SDLA E+ 
Sbjct:   216 FNSSADNIYVMVEQVGSGVSGRGSELHNDHYCWMRPEDIHYKRTVSQCYSSCSDLAAEMA 275

Query:   267 AALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNST 326
             AAL++ASIVFKD  +YS  L+  A  LY   +     R +  Y++    G E+  +YNS+
Sbjct:   276 AALASASIVFKDNRLYSKNLVHGAKTLYRFATTS---RNR--YSQN---GKESSKFYNSS 327

Query:   327 SFIDELVWGGTWLFFATGNNSYLAYATERFKAAEDEETESEK--GIFYWNNKXXXXXXXX 384
              F DEL+WGG WL++ATGN +YL   T    A +     +    G+F W+NK        
Sbjct:   328 MFEDELLWGGAWLYYATGNVTYLERVTSHHMAEKAGAFGNSPYYGVFSWDNKLPGAQLLL 387

Query:   385 XXXXFFRDLGYPYEGALRSSSSRTEILMCSYLSDHI-FNKTQGGLILLRPGSGGALEFAA 443
                  F   GYPYE  L    ++T  +MCSYL  +  FN+T GGLI L  G+   L++ A
Sbjct:   388 TRMRLFLSPGYPYEDMLSEFHNQTGRVMCSYLPYYKKFNRTNGGLIQLNHGAPQPLQYVA 447

Query:   444 TASFLSKXXXXXXXXXXXXGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGD 503
              A+FL+             G  CG + ++ + LR FS SQ+ YILG NP KMSY+VG+G 
Sbjct:   448 NAAFLAALFSDYLEAADTPGWYCGPNFYTTEFLRNFSRSQIDYILGKNPRKMSYVVGYGQ 507

Query:   504 KYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDK 563
             +YP QVHHR ASIP       TC  G +W  SK+ NPN + GAMVAGPD  D F D R  
Sbjct:   508 RYPKQVHHRGASIP--KNMKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTN 565

Query:   564 PWFTEPSIASNAGLVAALIAL 584
               +TEP++A NAGLVAAL+AL
Sbjct:   566 YNYTEPTLAGNAGLVAALVAL 586
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009624 "response to nematode" evidence=IEP
TAIR|locus:2034158 KOR2 "KORRIGAN 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157022 GH9A1 "glycosyl hydrolase 9A1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035384 GH9B5 "glycosyl hydrolase 9B5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005599 GH9B7 "glycosyl hydrolase 9B7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120232 GH9B17 "glycosyl hydrolase 9B17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118519 GH9B14 "glycosyl hydrolase 9B14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84R49GUN10_ORYSJ3, ., 2, ., 1, ., 40.45420.85250.8483yesno
Q38890GUN25_ARATH3, ., 2, ., 1, ., 40.45170.87190.8663yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00014277001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (518 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
PLN02345469 PLN02345, PLN02345, endoglucanase 1e-128
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 1e-121
PLN02171629 PLN02171, PLN02171, endoglucanase 1e-100
PLN02613498 PLN02613, PLN02613, endoglucanase 4e-98
PLN02266510 PLN02266, PLN02266, endoglucanase 4e-98
PLN00119489 PLN00119, PLN00119, endoglucanase 1e-97
PLN02340614 PLN02340, PLN02340, endoglucanase 4e-96
PLN02909486 PLN02909, PLN02909, Endoglucanase 3e-92
PLN02420525 PLN02420, PLN02420, endoglucanase 2e-91
PLN02308492 PLN02308, PLN02308, endoglucanase 4e-89
PLN03009495 PLN03009, PLN03009, cellulase 2e-87
PLN02175484 PLN02175, PLN02175, endoglucanase 2e-74
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information 
 Score =  386 bits (993), Expect = e-128
 Identities = 191/475 (40%), Positives = 272/475 (57%), Gaps = 30/475 (6%)

Query: 123 AVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPT 182
           A+  AL FFD QKSG   N +P+ +RG+S + DG  + L  DL  G YD+G+++KF FP 
Sbjct: 1   ALKIALQFFDIQKSGKLEN-NPIPWRGDSALLDGSDAGL--DLSKGMYDAGDHMKFGFPM 57

Query: 183 AYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKV-----SNDIN 237
           A+  T+LSWS++EY ++     +L+  KD +KW +DYL+    + N   +       D  
Sbjct: 58  AFTATVLSWSILEYGDQMNAANQLDSAKDSLKWITDYLINAHPSENVLYIQVGDPKLDHK 117

Query: 238 CWQRPEDMSYVRPVSVCDSTA--SDLAGEIIAALSAASIVFK-DEIMYSGELIKAAGKLY 294
           CW+RPE M   RP++  ++++  S++A E  AA++AAS+VFK  +  YS  L+K A +L+
Sbjct: 118 CWERPETMDEKRPLTKINTSSPGSEVAAETAAAMAAASLVFKSSDSTYSDTLLKHAKQLF 177

Query: 295 EVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATE 354
               +      +G Y++      E +DYYNST + DEL+W  +WL+ ATG+ +YLAY T 
Sbjct: 178 NFADK-----YRGSYSESIP---EVQDYYNSTGYGDELLWAASWLYHATGDKTYLAYVTG 229

Query: 355 RFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEG--ALRSSSSRTEILM 412
             K  ++         F W++KL  T VLL+RL FF   G        L+      E +M
Sbjct: 230 --KNGKEFADWGSPTWFSWDDKLAGTQVLLSRLTFFGPKGASNTVNSGLQMYKKTAEAVM 287

Query: 413 CSYLSDH---IFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGND 469
           C  L D      ++T GGLI +   +  AL+ A  ++FL+ LYSDY+     +  SC   
Sbjct: 288 CGLLPDSPTATTSRTDGGLIWVSEWN--ALQHAVNSAFLAVLYSDYMLSSGIAKLSCSGK 345

Query: 470 GFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEG 529
            F    LR+F+ SQ  YILG NPMKMSY+VG+GDKYP  VHHR ASIP D      C +G
Sbjct: 346 SFKPSDLRKFAKSQADYILGKNPMKMSYLVGYGDKYPQYVHHRGASIPAD--AKTGCKDG 403

Query: 530 DRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIAL 584
            +WL+S EPNPN+  GA+V GP   D F D RD     EP+  ++A LV  L +L
Sbjct: 404 FKWLHSSEPNPNVATGALVGGPFQNDTFVDSRDNSMQNEPTTYNSALLVGLLSSL 458

Length = 469
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 617
PLN02266510 endoglucanase 100.0
PLN02340614 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN03009495 cellulase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.26
KOG2787403 consensus Lanthionine synthetase C-like protein 1 96.09
COG1331667 Highly conserved protein containing a thioredoxin 96.01
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 92.62
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 90.59
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 88.5
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 84.33
>PLN02266 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=1e-118  Score=983.79  Aligned_cols=470  Identities=36%  Similarity=0.662  Sum_probs=415.8

Q ss_pred             HHHHHHHhhhhhcc------CC--CCCCCCCChhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 043321           94 ALLILALVLLIHFV------PH--KHHPHSPTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADL  165 (617)
Q Consensus        94 ~~~~~~~~~~~~~~------p~--~~~~~i~~~~Y~~al~~sL~Ff~aQRsG~lp~~~~v~Wr~~s~l~Dg~~~g~~~Dl  165 (617)
                      ++.+++.+|++..+      |+  .|+++|.+++|.++|++||+||++||||++|++++++||++|+|.|+.+.+  +||
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~~~--~Dl   90 (510)
T PLN02266         13 FIFLAFSLLLCNGFSSSSNNPFHHRHHPRLASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMH--VDL   90 (510)
T ss_pred             HHHHHHHHHhcCCCccccCCcccccCCCCCCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCcCc--ccC
Confidence            34445555554433      43  355679999999999999999999999999999999999999999988665  499


Q ss_pred             cccccccCCCcccccchhHHHHHHHHHHHHhHHHHhhcCChhHHHHHHHHHHHHHHhhCCCCCCCc-----cCcccCCcC
Q 043321          166 VGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTK-----VSNDINCWQ  240 (617)
Q Consensus       166 sGGWyDAGDy~Ky~~p~A~sv~~L~wa~~e~~~~~~~~~~~pdiLdEikWglD~Llkmgd~~~g~~-----~~~Dh~~W~  240 (617)
                      +|||||||||+||++|+|+|+++|+|+++||++.|.  +++||||||||||+||||||++.+++..     ...||.+|+
T Consensus        91 sGGwyDAGD~~Kf~~p~a~s~t~L~w~~~ef~~~~~--~~~pd~Ldelkw~~D~llk~~~~~~~vy~qVg~~~~Dh~~W~  168 (510)
T PLN02266         91 VGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMK--SELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKDHACWE  168 (510)
T ss_pred             CCcceeCCCCceecchHHHHHHHHHHHHHhhhhccc--cccHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCCCcccCC
Confidence            999999999999999999999999999999999995  7999999999999999999998765322     256999999


Q ss_pred             CCCCCCCCcceEecCC--CchhHHHHHHHHHHHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCC-
Q 043321          241 RPEDMSYVRPVSVCDS--TASDLAGEIIAALSAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACG-  316 (617)
Q Consensus       241 ~PEd~~~~R~v~~~s~--~gsdlaa~~AAALAaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~-  316 (617)
                      +||+|+.+|++|.++.  +|||+++++|||||+||||||+ |++||++||++||++|+||++     +|+.|.   .++ 
T Consensus       169 ~Pe~~~~~R~~y~i~~~~pgsd~a~e~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~fa~~-----~~g~y~---~~~~  240 (510)
T PLN02266        169 RPEDMDTPRSVFKVDKNTPGSDVAAETAAALAAASLVFRKSDPTYSKLLVRRAIRVFQFADK-----YRGAYS---NGLK  240 (510)
T ss_pred             ChhhcCCCCeeEEeCCCCCchHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHh-----CCCCcc---CCCC
Confidence            9999999999999764  4999999999999999999999 999999999999999999999     999886   332 


Q ss_pred             CCCCcccCC-CcccchhHHHHHHHHHHhCChhHHHHHHHhhhccccccccCCCcccccccHHHHHHHHhhhccccCCCCC
Q 043321          317 GEARDYYNS-TSFIDELVWGGTWLFFATGNNSYLAYATERFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGY  395 (617)
Q Consensus       317 ~~~~g~Y~s-s~~~DE~~WAAaeLy~ATGd~~Yl~~a~~~~~~~~~~~~~~~~~~~~Wdn~~~~a~~lLa~~~~~~~~~~  395 (617)
                      +...++|.+ ++|.||++|||+|||+||||++|+++++....   .+......+.|+||+|..++++||+++.....   
T Consensus       241 ~~~~~~y~s~s~~~DEl~WAAawLy~ATGd~~Yl~~~~~~~~---~~g~~~~~~~~~WD~k~~ga~vLLa~~~~~~~---  314 (510)
T PLN02266        241 PDVCPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQVNGQ---ILGADEFDNTFGWDNKHVGARILLSKAFLVQK---  314 (510)
T ss_pred             cccCCCcccCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHh---hccccccCCccCcchhHHHHHHHHHHHHhhcc---
Confidence            234678887 88999999999999999999999999987542   11222235689999999999999999764321   


Q ss_pred             chhhHHHHHHHHHHHHHHhhccC---CcccccCCcceeeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCC
Q 043321          396 PYEGALRSSSSRTEILMCSYLSD---HIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFS  472 (617)
Q Consensus       396 p~~~~~~~~~~~~~~~~~~~~~~---~~~~~Tp~Gl~~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~  472 (617)
                        +..+..|++.++.++|.++++   ..+++||+||+|...|  |++||++|+|||+++|++++...+ ..+.||+....
T Consensus       315 --~~~~~~yk~~~d~~~~~~~~~~~~~~~~~TpGGL~~~~~w--g~lrYa~~~afla~vya~~l~~~~-~~~~cg~~~~~  389 (510)
T PLN02266        315 --VQSLHEYKGHADNFICSVIPGAPFSSTQYTPGGLLFKMSD--SNMQYVTSTSFLLLTYAKYLTSAK-TVVNCGGTVVT  389 (510)
T ss_pred             --hHHHHHHHHHHHHHHHhccCCCCCCccccCCCeeEEeCCC--CcHHHHHHHHHHHHHHHHHHHhcC-CceecCCCccC
Confidence              345678999999999998875   3568999999999999  999999999999999999987655 57899998889


Q ss_pred             HHHHHHHHHhhchhhccCCCCCcceEEeeCCCCCCCccccCCCCCCC--CCCcccccCCCccccCCCCCCCCccceEeeC
Q 043321          473 LQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWD--DGQHYTCAEGDRWLYSKEPNPNLLVGAMVAG  550 (617)
Q Consensus       473 ~~~y~~~A~~qidYiLG~NP~g~SyVvG~G~~~P~~pHHR~ss~~~~--~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGG  550 (617)
                      ..+|++||++|||||||+||+++|||||||.|+|++||||.||||..  ++.++.|.+||+|++++.||||+|.||||||
T Consensus       390 ~~~~~~fA~~QidYiLG~NP~~~SyvVG~G~~~P~~pHHR~as~p~~~~~~~~~~C~~g~~~~~~~~~n~~vL~GAlVGG  469 (510)
T PLN02266        390 PARLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSVAAHPAKIQCSQGFSIMNSQSPNPNVLVGAVVGG  469 (510)
T ss_pred             HHHHHHHHHhhhceeccCCCCCCceEEecCCCCCccccccCCCCCCcccCccccCCCCCccccCCCCCCcceecceeecC
Confidence            99999999999999999999999999999999999999999999842  2556799999999999999999999999999


Q ss_pred             CCCCCCcccCCCCcccCcccccccHHHHHHHHHhcC
Q 043321          551 PDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHD  586 (617)
Q Consensus       551 Pn~~d~y~D~r~~y~~NEvaId~NA~lv~ala~l~~  586 (617)
                      ||.+|.|.|+|.+|++|||||||||+||++||+|..
T Consensus       470 Pd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~~  505 (510)
T PLN02266        470 PDQHDRFPDERSDYEQSEPATYINAPLVGALAYLAH  505 (510)
T ss_pred             CCCCCCCCccccccccCcceeecchHHHHHHHHHHH
Confidence            999999999999999999999999999999999975

>PLN02340 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 2e-47
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 7e-47
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 1e-39
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 1e-39
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 9e-37
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 2e-29
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 2e-29
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 6e-24
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 230/471 (48%), Gaps = 61/471 (12%)
Query: 124 VNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTA 183
           +  +L F++AQ+SG  P    V +R +S + D    +   DL GG++D+G+ +KF FP A
Sbjct: 9   LRDSLLFYEAQRSGRLPADQKVTWRKDSALND--QGDQGQDLTGGYFDAGDFVKFGFPMA 66
Query: 184 YAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGND-----TKVSNDINC 238
           Y  T+L+W +I+++  Y+  G L+  +  +KW +DY +K  ++ N+      +   D   
Sbjct: 67  YTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAF 126
Query: 239 WQRPEDMSYVRPVSVCDST--ASDLAGEIIAALSAASIVFKD-EIMYSGELIKAAGKLYE 295
           W RPEDM+  RP    D++   SDLAGE  AAL+AASIVF++ +  YS  L+  A +L++
Sbjct: 127 WGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFD 186
Query: 296 VTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATER 355
             +       +G Y+       +AR++Y S  + DELVW   WL+ AT +N+YL  A   
Sbjct: 187 FAN-----NYRGKYSDSIT---DARNFYASADYRDELVWAAAWLYRATNDNTYLNTAESL 238
Query: 356 FKAAEDEETESEKGIFYWNNKXXXXXXXXXXXXFFRDLGYPYEGALRSSSSRTEILMCSY 415
           +   ++   ++  G   W++K                 G     A  ++    +  + SY
Sbjct: 239 Y---DEFGLQNWGGGLNWDSKVS---------------GVQVLLAKLTNKQAYKDTVQSY 280
Query: 416 LSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKXXXXXXXXXXXXGGSCGNDGFSLQM 475
           ++  I N+ +    LL     G L  AA A+F+                     G S   
Sbjct: 281 VNYLINNQQKTPKGLLYIDMWGTLRHAANAAFIMLEAAEL--------------GLSASS 326
Query: 476 LRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYS 535
            R+F+ +Q+ Y LGD     S++ GFG   P + HHRS+S P       TC     W   
Sbjct: 327 YRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCP---PAPATC----DWNTF 377
Query: 536 KEPNPN--LLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIAL 584
             P+PN  +L GA+V GPD  DN+ D+R      E +   NAG  +AL AL
Sbjct: 378 NSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAAL 428
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-110
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-109
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-108
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-107
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-106
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-104
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 4e-95
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 2e-86
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 5e-76
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 4e-44
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
 Score =  342 bits (879), Expect = e-110
 Identities = 149/483 (30%), Positives = 231/483 (47%), Gaps = 54/483 (11%)

Query: 116 PTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNN 175
           P  N   A+ +++ F++AQ+SG  P  + V +RG+SG+ DG    L  DL GG+YD+G++
Sbjct: 2   PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGL--DLTGGWYDAGDH 59

Query: 176 IKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKV--- 232
           +KF FP A+  T+L+W  IE  E Y   G++ ++KD ++W +DY +K   + N   V   
Sbjct: 60  VKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVG 119

Query: 233 --SNDINCWQRPEDMSYVRPVSVCD--STASDLAGEIIAALSAASIVFKDE-IMYSGELI 287
               D   W   E M   RP    D     SD+A E  AA++A+SIVF D+   Y+  L+
Sbjct: 120 DGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLV 179

Query: 288 KAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNS 347
           + A +LY           +G+Y+     G     Y + + + DELVWG  WL+ ATG++S
Sbjct: 180 QHAKQLYTFAD-----TYRGVYSDCVPAGA---FYNSWSGYQDELVWGAYWLYKATGDDS 231

Query: 348 YLAYATER---FKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSS 404
           YLA A          +  +  S +    W++K   T VLL +    +         L   
Sbjct: 232 YLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETGKQKYIDDANRWLDYW 291

Query: 405 SSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGG 464
           +         Y        + GG+ +L     GAL +AA  +F++ +Y+  +        
Sbjct: 292 TVGVNGQRVPY--------SPGGMAVLDT--WGALRYAANTAFVALVYAKVI-------- 333

Query: 465 SCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHY 524
              +D    Q    F++ Q++Y LGDNP   SY+VGFG+  P   HHR+A   W D    
Sbjct: 334 ---DDPVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTD---- 386

Query: 525 TCAEGDRWLYSKEPNPNLLVGAMVAGPD-IFDNFSDERDKPWFTEPSIASNAGLVAALIA 583
                   + S   N ++L GA+V GP    D ++D+R      E +   NAG  +AL  
Sbjct: 387 -------SIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAM 439

Query: 584 LHD 586
           L +
Sbjct: 440 LVE 442
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query617
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.32
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 94.98
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 94.78
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 94.4
1nc5_A373 Hypothetical protein YTER; structural genomics, he 90.78
1nc5_A373 Hypothetical protein YTER; structural genomics, he 90.54
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 89.08
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 87.16
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 86.94
3k11_A445 Putative glycosyl hydrolase; structural genomics, 86.46
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 84.88
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 84.59
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 82.58
3pmm_A382 Putative cytoplasmic protein; structural genomics, 81.58
3pmm_A382 Putative cytoplasmic protein; structural genomics, 81.21
3k11_A445 Putative glycosyl hydrolase; structural genomics, 80.51
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
Probab=100.00  E-value=2e-109  Score=905.34  Aligned_cols=421  Identities=35%  Similarity=0.618  Sum_probs=379.0

Q ss_pred             ChhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchhHHHHHHHHHHHHh
Q 043321          117 TKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEY  196 (617)
Q Consensus       117 ~~~Y~~al~~sL~Ff~aQRsG~lp~~~~v~Wr~~s~l~Dg~~~g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~wa~~e~  196 (617)
                      ..+|.++|+++|+||++||||++|++++++||++|||.||.+.+.  ||+|||||||||+||++|||+++++|+|+++||
T Consensus         2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~--Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~   79 (433)
T 1ks8_A            2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQ--DLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDF   79 (433)
T ss_dssp             CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCC--BCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcc--cCCCceeECCCCCeeccchHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999999999999977654  999999999999999999999999999999999


Q ss_pred             HHHHhhcCChhHHHHHHHHHHHHHHhhCCCCCCC---cc--CcccCCcCCCCCCCCCcceEecCC--CchhHHHHHHHHH
Q 043321          197 QEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDT---KV--SNDINCWQRPEDMSYVRPVSVCDS--TASDLAGEIIAAL  269 (617)
Q Consensus       197 ~~~~~~~~~~pdiLdEikWglD~Llkmgd~~~g~---~~--~~Dh~~W~~PEd~~~~R~v~~~s~--~gsdlaa~~AAAL  269 (617)
                      ++.|+++|++||||||||||+||||||+++++..   +.  ..||.||++||+|+.+|++|+++.  +||++++++||||
T Consensus        80 ~~~~~~~~~~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAal  159 (433)
T 1ks8_A           80 EAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAAL  159 (433)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHH
T ss_pred             HHhhhcCCchHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHH
Confidence            9999999999999999999999999999876521   11  368999999999999999999874  4899999999999


Q ss_pred             HHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhCChhH
Q 043321          270 SAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSY  348 (617)
Q Consensus       270 AaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd~~Y  348 (617)
                      |+||||||+ |++||++||++||++|+||++     +|+.|.   ++++...++|+|+++.||++|||+|||+||||++|
T Consensus       160 A~as~vfk~~D~~yA~~~L~~A~~~~~fa~~-----~~~~y~---~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Y  231 (433)
T 1ks8_A          160 AAASIVFRNVDGTYSNNLLTHARQLFDFANN-----YRGKYS---DSITDARNFYASADYRDELVWAAAWLYRATNDNTY  231 (433)
T ss_dssp             HHHHHHTTTTCHHHHHHHHHHHHHHHHHHHH-----SCCCHH---HHSGGGGGTSCCCCTHHHHHHHHHHHHHHHCCHHH
T ss_pred             HHHHHhccccCHHHHHHHHHHHHHHHHHHHH-----CCCccc---CCCCcCCCCCCCCCcccHHHHHHHHHHHHhCCHHH
Confidence            999999999 999999999999999999999     999987   44455678999999999999999999999999999


Q ss_pred             HHHHHHhhhccccccccCCCcccccccHHHHHHHHhhhccccCCCCCchhhHHHHHHHHHHHHHHhhccCCcccccCCcc
Q 043321          349 LAYATERFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKTQGGL  428 (617)
Q Consensus       349 l~~a~~~~~~~~~~~~~~~~~~~~Wdn~~~~a~~lLa~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~Gl  428 (617)
                      ++++++++..   +........|+|++|..+++++|++++.  .         +.|++.++.++|.++.  ...+||+|+
T Consensus       232 l~~~~~~~~~---~~~~~~~~~~~Wd~~~~g~~~lla~~~~--~---------~~~~~~~~~~~~~~~~--~~~~tp~Gl  295 (433)
T 1ks8_A          232 LNTAESLYDE---FGLQNWGGGLNWDSKVSGVQVLLAKLTN--K---------QAYKDTVQSYVNYLIN--NQQKTPKGL  295 (433)
T ss_dssp             HHHHHHHHHH---TTGGGSCCCCCSSCCHHHHHHHHHHHHC--C---------HHHHHHHHHHHHHHHH--TSCBCTTSC
T ss_pred             HHHHHHHHHh---cCcCcCcCCcCccchhhHHHHHHhhccC--h---------HHHHHHHHHHHHHHHh--cCCcCCCCc
Confidence            9999986532   2222235689999999999999987753  1         4688888888888775  467899999


Q ss_pred             eeeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcceEEeeCCCCCCC
Q 043321          429 ILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQ  508 (617)
Q Consensus       429 ~~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~SyVvG~G~~~P~~  508 (617)
                      .|...|  |||+|++|+||++++++++              .+++.+|+++|++|||||||+|  ++|||||||.|+|++
T Consensus       296 ~~~~~W--Gs~~~~~n~a~l~~~~~~~--------------~~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p~~  357 (433)
T 1ks8_A          296 LYIDMW--GTLRHAANAAFIMLEAAEL--------------GLSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTR  357 (433)
T ss_dssp             BCCCST--THHHHHHHHHHHHHHHHHT--------------TSSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSC
T ss_pred             eeecCC--chhHHHHHHHHHHHHHHhc--------------CCCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCCCC
Confidence            998899  9999999999999999984              1468899999999999999998  889999999999999


Q ss_pred             ccccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCCCCCCcccCCCCcccCcccccccHHHHHHHHHhcC
Q 043321          509 VHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHD  586 (617)
Q Consensus       509 pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~lv~ala~l~~  586 (617)
                      ||||.+++|..   +..|.  |.+++++.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|..
T Consensus       358 pHHR~s~~~~~---~~~c~--~~~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~  430 (433)
T 1ks8_A          358 PHHRSSSCPPA---PATCD--WNTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA  430 (433)
T ss_dssp             CSCHHHHCCCT---TSCCS--HHHHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred             CcchhhcCCCc---ccccc--ccccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHh
Confidence            99999999853   34665  456899999999999999999999999999999999999999999999999999976
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 617
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-112
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-107
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-100
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 2e-99
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 2e-75
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 8e-71
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  342 bits (879), Expect = e-112
 Identities = 149/483 (30%), Positives = 231/483 (47%), Gaps = 54/483 (11%)

Query: 116 PTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNN 175
           P  N   A+ +++ F++AQ+SG  P  + V +RG+SG+ DG    L  DL GG+YD+G++
Sbjct: 2   PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGL--DLTGGWYDAGDH 59

Query: 176 IKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTKV--- 232
           +KF FP A+  T+L+W  IE  E Y   G++ ++KD ++W +DY +K   + N   V   
Sbjct: 60  VKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVG 119

Query: 233 --SNDINCWQRPEDMSYVRPVSVCD--STASDLAGEIIAALSAASIVFKD-EIMYSGELI 287
               D   W   E M   RP    D     SD+A E  AA++A+SIVF D +  Y+  L+
Sbjct: 120 DGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLV 179

Query: 288 KAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNS 347
           + A +LY           +G+Y+     G     Y + + + DELVWG  WL+ ATG++S
Sbjct: 180 QHAKQLYTFAD-----TYRGVYSDCVPAGA---FYNSWSGYQDELVWGAYWLYKATGDDS 231

Query: 348 YLAYATER---FKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSS 404
           YLA A          +  +  S +    W++K   T VLL +    +         L   
Sbjct: 232 YLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETGKQKYIDDANRWLDYW 291

Query: 405 SSRTEILMCSYLSDHIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGG 464
           +         Y        + GG+ +L     GAL +AA  +F++ +Y+  +        
Sbjct: 292 TVGVNGQRVPY--------SPGGMAVLDT--WGALRYAANTAFVALVYAKVI-------- 333

Query: 465 SCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHY 524
              +D    Q    F++ Q++Y LGDNP   SY+VGFG+  P   HHR+A   W D    
Sbjct: 334 ---DDPVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTD---- 386

Query: 525 TCAEGDRWLYSKEPNPNLLVGAMVAGPD-IFDNFSDERDKPWFTEPSIASNAGLVAALIA 583
                   + S   N ++L GA+V GP    D ++D+R      E +   NAG  +AL  
Sbjct: 387 -------SIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAM 439

Query: 584 LHD 586
           L +
Sbjct: 440 LVE 442
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query617
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 93.12
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 91.66
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 85.47
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 83.77
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 82.21
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 80.04
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=4.9e-103  Score=859.57  Aligned_cols=426  Identities=34%  Similarity=0.597  Sum_probs=371.3

Q ss_pred             CChhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchhHHHHHHHHHHHH
Q 043321          116 PTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIE  195 (617)
Q Consensus       116 ~~~~Y~~al~~sL~Ff~aQRsG~lp~~~~v~Wr~~s~l~Dg~~~g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~wa~~e  195 (617)
                      ++.+|+++|+++|+||++||||.+|+.++++||++||+.||++.+.  ||+|||||||||+||++|+++++++|+|++++
T Consensus         2 ~~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~--DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~   79 (460)
T d1tf4a1           2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGL--DLTGGWYDAGDHVKFGFPMAFTATMLAWGAIE   79 (460)
T ss_dssp             CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTS--CCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcC--CCCCCceeCCCcceecccHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999987754  99999999999999999999999999999999


Q ss_pred             hHHHHhhcCChhHHHHHHHHHHHHHHhhCCCCCCCc-----cCcccCCcCCCCCCCCCcceEecCC--CchhHHHHHHHH
Q 043321          196 YQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDTK-----VSNDINCWQRPEDMSYVRPVSVCDS--TASDLAGEIIAA  268 (617)
Q Consensus       196 ~~~~~~~~~~~pdiLdEikWglD~Llkmgd~~~g~~-----~~~Dh~~W~~PEd~~~~R~v~~~s~--~gsdlaa~~AAA  268 (617)
                      ||+.|++.|++||||||||||+|||||||+++++..     ...||++|++||.|+.+|+.+.+..  +++++++++|||
T Consensus        80 ~~~~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAa  159 (460)
T d1tf4a1          80 SPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAA  159 (460)
T ss_dssp             CHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHH
T ss_pred             ChHhhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHH
Confidence            999999999999999999999999999999876321     2568999999999998899887653  388999999999


Q ss_pred             HHHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhCChh
Q 043321          269 LSAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNS  347 (617)
Q Consensus       269 LAaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd~~  347 (617)
                      ||+||||||+ |++||++||++||++|+||++     +|+.|.   +..+.+.++|+++++.||++|||+|||++|||++
T Consensus       160 lA~as~v~~~~d~~~A~~~l~aA~~a~~~a~~-----~~~~~~---~~~~~~~~~~~~~~~~De~~wAAaeLy~aTG~~~  231 (460)
T d1tf4a1         160 MAASSIVFADDDPAYAATLVQHAKQLYTFADT-----YRGVYS---DCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDS  231 (460)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH-----SCCCGG---GTSTTHHHHCCSSCSHHHHHHHHHHHHHHHCCHH
T ss_pred             HHHHHHhccccCHHHHHHHHHHHHHHHHHHHH-----CCCCCC---CCCCCCCcCCCccccchHHHHHHHHHHHHhCCHH
Confidence            9999999999 999999999999999999999     899887   4444455677889999999999999999999999


Q ss_pred             HHHHHHHhhhcccc---ccccCCCcccccccHHHHHHHHhhhccccCCCCCchhhHHHHHHHHHHHHHHhhccC---Ccc
Q 043321          348 YLAYATERFKAAED---EETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSD---HIF  421 (617)
Q Consensus       348 Yl~~a~~~~~~~~~---~~~~~~~~~~~Wdn~~~~a~~lLa~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~  421 (617)
                      |+++++..+.....   .......+.++|+++..+++++|++.+.           +..+++.++.+++.+...   ...
T Consensus       232 Y~~~a~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  300 (460)
T d1tf4a1         232 YLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETG-----------KQKYIDDANRWLDYWTVGVNGQRV  300 (460)
T ss_dssp             HHHHHHHHGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHTTTCBTTBCC
T ss_pred             HHHHHHHHhhhcccccccccccccccccccchhHHHHHHHHHHhh-----------hhHHHHHHHHHHHHHhhhcccccC
Confidence            99999986542111   1112234578999999888888876553           135677777777766544   445


Q ss_pred             cccCCcceeeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcceEEee
Q 043321          422 NKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGF  501 (617)
Q Consensus       422 ~~Tp~Gl~~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~SyVvG~  501 (617)
                      ..+++|+.|...|  ||+++++|++|++++++++...           .+++++|+++|++|||||||+||+++||||||
T Consensus       301 ~~~~~~~~~~~~W--Gsn~~~~n~a~~~~~a~~~~~~-----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~  367 (460)
T d1tf4a1         301 PYSPGGMAVLDTW--GALRYAANTAFVALVYAKVIDD-----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGF  367 (460)
T ss_dssp             CBCTTSCBCCCSS--SHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTS
T ss_pred             CcCCCcceecCCC--chHHHHHHHHHHHHHHHHHhcc-----------cCCHHHHHHHHHHhhheecccCCCCcCCCccC
Confidence            6678899998899  9999999999999999986432           23468999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCC-CCCCcccCCCCcccCcccccccHHHHHH
Q 043321          502 GDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPD-IFDNFSDERDKPWFTEPSIASNAGLVAA  580 (617)
Q Consensus       502 G~~~P~~pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn-~~d~y~D~r~~y~~NEvaId~NA~lv~a  580 (617)
                      |.|+|+|||||.++++..           .++..+.||+++|+|+|||||| +.+||+|++++|++|||||||||+||++
T Consensus       368 G~~~p~~pHHR~s~~~~~-----------~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~  436 (460)
T d1tf4a1         368 GNNPPRNPHHRTAHGSWT-----------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSA  436 (460)
T ss_dssp             SSSCCSCCSCHHHHTCSS-----------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHH
T ss_pred             CCCCCCCCcCccccCCCc-----------cccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHH
Confidence            999999999999887643           2456688999999999999999 5899999999999999999999999999


Q ss_pred             HHHhcC
Q 043321          581 LIALHD  586 (617)
Q Consensus       581 la~l~~  586 (617)
                      ||+|.+
T Consensus       437 la~l~~  442 (460)
T d1tf4a1         437 LAMLVE  442 (460)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999988
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure