Citrus Sinensis ID: 043371
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 271 | ||||||
| 255575867 | 282 | protein phosphatase 2c, putative [Ricinu | 0.996 | 0.957 | 0.696 | 1e-109 | |
| 224102197 | 282 | predicted protein [Populus trichocarpa] | 0.996 | 0.957 | 0.667 | 1e-102 | |
| 147853132 | 294 | hypothetical protein VITISV_021550 [Viti | 1.0 | 0.921 | 0.615 | 4e-99 | |
| 359477668 | 289 | PREDICTED: putative protein phosphatase | 1.0 | 0.937 | 0.619 | 4e-98 | |
| 224110592 | 266 | predicted protein [Populus trichocarpa] | 0.948 | 0.966 | 0.662 | 6e-97 | |
| 357441117 | 274 | Protein phosphatase 2C [Medicago truncat | 0.996 | 0.985 | 0.603 | 1e-90 | |
| 356574766 | 277 | PREDICTED: putative protein phosphatase | 0.963 | 0.942 | 0.593 | 2e-90 | |
| 388504806 | 274 | unknown [Medicago truncatula] | 0.996 | 0.985 | 0.6 | 6e-90 | |
| 357452383 | 274 | hypothetical protein MTR_2g077900 [Medic | 0.996 | 0.985 | 0.589 | 7e-90 | |
| 356533759 | 277 | PREDICTED: putative protein phosphatase | 0.977 | 0.956 | 0.602 | 4e-89 |
| >gi|255575867|ref|XP_002528831.1| protein phosphatase 2c, putative [Ricinus communis] gi|223531743|gb|EEF33565.1| protein phosphatase 2c, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/283 (69%), Positives = 227/283 (80%), Gaps = 13/283 (4%)
Query: 1 MGLRDLHLKLKAFRLRRLLIGAGPSKKRQYGIAKKQSWMTPISHGYHVVEDQSCRGDLDV 60
MGL+DLHLKLKAFRL+R LI G KKR + KK SW PISHGYHVVEDQS G D
Sbjct: 1 MGLKDLHLKLKAFRLKRFLIRDG-GKKRTSNMTKKPSWAMPISHGYHVVEDQSFGGGSDY 59
Query: 61 SDCDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKK 120
S+ SVVVQREQ+ E+ELWFFGVFDA++GD V +++QSH FDR K SQIRRKSK+T++K
Sbjct: 60 SNSASVVVQREQIQELELWFFGVFDARIGDGVTKYLQSHLFDRNPKESQIRRKSKETMRK 119
Query: 121 AYLGARAKARDAGKA-DEKWRAGSASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGR 179
AYLGARAK ++ K+ DE WR GSASVMVINGEKLVIANMG+YR VVCRDGVAHQ+ S
Sbjct: 120 AYLGARAKIKETPKSEDETWRVGSASVMVINGEKLVIANMGDYRVVVCRDGVAHQVRSKH 179
Query: 180 QHTAKRHWSRKLFS-----------GTKHSKGSELAVGAEKIDSDTEFVLIASTGIWEVM 228
Q T KRHWSR+LF G+K SKGSEL +GAEKIDSDTEFV+IASTGIWEVM
Sbjct: 180 QETTKRHWSRRLFPGMLALKFSKAGGSKESKGSELVIGAEKIDSDTEFVIIASTGIWEVM 239
Query: 229 KNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRFD 271
KNQEAV+LIRH+ D Q AAECL+KEALTRM++SN SCV++RFD
Sbjct: 240 KNQEAVNLIRHMDDPQAAAECLSKEALTRMTKSNSSCVIIRFD 282
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224102197|ref|XP_002312585.1| predicted protein [Populus trichocarpa] gi|222852405|gb|EEE89952.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147853132|emb|CAN80687.1| hypothetical protein VITISV_021550 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359477668|ref|XP_002281570.2| PREDICTED: putative protein phosphatase 2C-like protein 44-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224110592|ref|XP_002315569.1| predicted protein [Populus trichocarpa] gi|222864609|gb|EEF01740.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|357441117|ref|XP_003590836.1| Protein phosphatase 2C [Medicago truncatula] gi|355479884|gb|AES61087.1| Protein phosphatase 2C [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356574766|ref|XP_003555516.1| PREDICTED: putative protein phosphatase 2C-like protein 44-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|388504806|gb|AFK40469.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357452383|ref|XP_003596468.1| hypothetical protein MTR_2g077900 [Medicago truncatula] gi|355485516|gb|AES66719.1| hypothetical protein MTR_2g077900 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356533759|ref|XP_003535427.1| PREDICTED: putative protein phosphatase 2C-like protein 44-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 271 | ||||||
| TAIR|locus:2121373 | 283 | AT4G28400 [Arabidopsis thalian | 0.516 | 0.494 | 0.294 | 4.3e-32 | |
| TAIR|locus:2087095 | 289 | AT3G15260 [Arabidopsis thalian | 0.560 | 0.525 | 0.267 | 3.8e-31 | |
| TAIR|locus:2046046 | 290 | PIA1 "PP2C induced by AVRRPM1" | 0.516 | 0.482 | 0.287 | 9.3e-30 | |
| TAIR|locus:2061579 | 339 | AT2G34740 [Arabidopsis thalian | 0.494 | 0.395 | 0.296 | 1.1e-23 | |
| TAIR|locus:2124784 | 311 | WIN2 "HOPW1-1-interacting 2" [ | 0.232 | 0.202 | 0.523 | 2.1e-23 | |
| TAIR|locus:2149363 | 447 | AT5G24940 [Arabidopsis thalian | 0.232 | 0.140 | 0.476 | 2.7e-22 | |
| TAIR|locus:2194734 | 283 | AT1G78200 [Arabidopsis thalian | 0.284 | 0.272 | 0.462 | 1.7e-21 | |
| TAIR|locus:2008341 | 282 | AT1G34750 [Arabidopsis thalian | 0.254 | 0.244 | 0.463 | 1.1e-20 | |
| TAIR|locus:2183695 | 354 | AT5G10740 [Arabidopsis thalian | 0.232 | 0.177 | 0.460 | 2.7e-20 | |
| TAIR|locus:2029172 | 371 | AT1G43900 [Arabidopsis thalian | 0.258 | 0.188 | 0.436 | 4.1e-17 |
| TAIR|locus:2121373 AT4G28400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 193 (73.0 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 43/146 (29%), Positives = 77/146 (52%)
Query: 31 GIAKKQSWMTPISHGYHVVEDQSCRGXXXXXXXXXXXXQREQLDEIELWFFGVFDAQVGD 90
G K + W I+HG+H V +G + ++L+ EL F +FD +G
Sbjct: 24 GRGKSKMWKN-ITHGFHCV-----KGKSSHPMEDYVVSEFKKLEGHELGLFAIFDGHLGH 77
Query: 91 SVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLXXXXXXXXXXXXXEKWRAGSASVMVIN 150
VA+++Q++ FD LK +++ ++ AY K + + + ++I+
Sbjct: 78 DVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQSLKLGKGGSTAVTGILID 137
Query: 151 GEKLVIANMGEYRAVVCRDGVAHQIS 176
G+KLV+AN+G+ RAV+ ++GVAHQ+S
Sbjct: 138 GKKLVVANVGDSRAVMSKNGVAHQLS 163
|
|
| TAIR|locus:2087095 AT3G15260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2046046 PIA1 "PP2C induced by AVRRPM1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2061579 AT2G34740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2194734 AT1G78200 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008341 AT1G34750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 271 | |||
| cd00143 | 254 | cd00143, PP2Cc, Serine/threonine phosphatases, fam | 3e-32 | |
| smart00332 | 252 | smart00332, PP2Cc, Serine/threonine phosphatases, | 8e-32 | |
| pfam00481 | 252 | pfam00481, PP2C, Protein phosphatase 2C | 1e-23 | |
| COG0631 | 262 | COG0631, PTC1, Serine/threonine protein phosphatas | 2e-19 | |
| PLN03145 | 365 | PLN03145, PLN03145, Protein phosphatase 2c; Provis | 1e-13 |
| >gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 3e-32
Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 63 CDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDR-----KLKPSQIRRKSKDT 117
D+VV++ +E FGVFD G + F + + + ++
Sbjct: 16 EDAVVIKPNLNNEDGG-LFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEA 74
Query: 118 LKKAYLGARAKARDAGKAD-EKWRAGS-ASVMVINGEKLVIANMGEYRAVVCRDGVAHQI 175
L+KA+L A + + + + + R+G+ A V +I G KL +AN+G+ RAV+CR+G A Q+
Sbjct: 75 LRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQL 134
Query: 176 SSGRQHT------AKRHWSRKLFS---------------GTKHSKGSELA---VGAEKID 211
+ + H +R G K A V K+
Sbjct: 135 T--KDHKPVNEEERERIEKAGGRVSNGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLT 192
Query: 212 SDTEFVLIASTGIWEVMKNQEAVSLIRH---IGDAQEAAECLAKEALTRMSRSNISCVVV 268
D +F+++AS G+W+V+ NQEAV ++R D QEAA+ L AL R S NI+ VVV
Sbjct: 193 EDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRGSHDNITVVVV 252
Query: 269 RF 270
R
Sbjct: 253 RL 254
|
Length = 254 |
| >gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C | Back alignment and domain information |
|---|
| >gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 271 | |||
| PLN03145 | 365 | Protein phosphatase 2c; Provisional | 100.0 | |
| KOG0697 | 379 | consensus Protein phosphatase 1B (formerly 2C) [Si | 100.0 | |
| PTZ00224 | 381 | protein phosphatase 2C; Provisional | 100.0 | |
| KOG0698 | 330 | consensus Serine/threonine protein phosphatase [Si | 100.0 | |
| COG0631 | 262 | PTC1 Serine/threonine protein phosphatase [Signal | 100.0 | |
| PF00481 | 254 | PP2C: Protein phosphatase 2C; InterPro: IPR001932 | 100.0 | |
| smart00332 | 255 | PP2Cc Serine/threonine phosphatases, family 2C, ca | 100.0 | |
| cd00143 | 254 | PP2Cc Serine/threonine phosphatases, family 2C, ca | 100.0 | |
| PRK14559 | 645 | putative protein serine/threonine phosphatase; Pro | 100.0 | |
| KOG0699 | 542 | consensus Serine/threonine protein phosphatase [Si | 100.0 | |
| KOG0700 | 390 | consensus Protein phosphatase 2C/pyruvate dehydrog | 100.0 | |
| KOG1323 | 493 | consensus Serine/threonine phosphatase [Signal tra | 99.96 | |
| KOG1379 | 330 | consensus Serine/threonine protein phosphatase [Si | 99.91 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.87 | |
| PF13672 | 212 | PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A | 99.84 | |
| smart00331 | 193 | PP2C_SIG Sigma factor PP2C-like phosphatases. | 99.78 | |
| TIGR02865 | 764 | spore_II_E stage II sporulation protein E. Stage I | 99.67 | |
| PF07228 | 193 | SpoIIE: Stage II sporulation protein E (SpoIIE); I | 99.53 | |
| COG2208 | 367 | RsbU Serine phosphatase RsbU, regulator of sigma s | 98.64 |
| >PLN03145 Protein phosphatase 2c; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-48 Score=344.86 Aligned_cols=226 Identities=26% Similarity=0.412 Sum_probs=192.7
Q ss_pred CceeeEEEeccccCCCCCCCCCCCceEEEecccc--------CCCceEEEEEecCCCchHHHHHHHHHhHHHHhCCCCch
Q 043371 40 TPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQL--------DEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIR 111 (271)
Q Consensus 40 ~~~~~g~~s~~G~r~~~~~r~~neD~~~~~~~~~--------~~~~~~l~~V~DG~gG~~aa~~~~~~l~~~~~~~~~~~ 111 (271)
.-+.+|.++.+|.|+ .|||++++..++. ......||||||||||+.++++++++|++.+.+...+.
T Consensus 63 ~~~~~~~~s~~G~R~------~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~ 136 (365)
T PLN03145 63 PVVRSGAWADIGSRS------SMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFP 136 (365)
T ss_pred CceEEEEEccccCCC------CCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccc
Confidence 346889999999887 8999988754321 11246899999999999999999999999998766555
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCccCCCcee-EEEEEeCCEEEEEEccCceEEEEeCCeEEECCCCCCCh--hHHHHH
Q 043371 112 RKSKDTLKKAYLGARAKARDAGKADEKWRAGSA-SVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHT--AKRHWS 188 (271)
Q Consensus 112 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT-~~~~i~~~~l~vanvGDSr~~l~~~g~~~~lt~dH~~~--~e~~ri 188 (271)
..+.++|.++|..++.++.+....+....+||| +++++.++++|||||||||+|++++|++++||.||++. .|++||
T Consensus 137 ~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI 216 (365)
T PLN03145 137 REIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRI 216 (365)
T ss_pred hhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHH
Confidence 678889999999999999876554444568999 99999999999999999999999999999999999998 788899
Q ss_pred HH--------hcCC---CCC----------------CccccceEEEEEecCCCcEEEEEeCCCCCCcChHHHHHHHHc--
Q 043371 189 RK--------LFSG---TKH----------------SKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRH-- 239 (271)
Q Consensus 189 ~~--------~~~g---l~~----------------~v~~~p~i~~~~l~~~~~~liL~SDGlwd~l~~~ei~~~v~~-- 239 (271)
.+ +++| +++ .++++|++..+.+.++++|||||||||||+|+++++++++..
T Consensus 217 ~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l 296 (365)
T PLN03145 217 EASGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRL 296 (365)
T ss_pred HHcCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHH
Confidence 87 3333 221 356899999999998889999999999999999999777643
Q ss_pred --cCCHHHHHHHHHHHHHhcCCCCCeEEEEEEcC
Q 043371 240 --IGDAQEAAECLAKEALTRMSRSNISCVVVRFD 271 (271)
Q Consensus 240 --~~~~~~~a~~L~~~A~~~g~~DNiTvivv~l~ 271 (271)
..+|+++|+.|++.|+.+++.||+|||||+|+
T Consensus 297 ~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~ 330 (365)
T PLN03145 297 QEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQ 330 (365)
T ss_pred hcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEee
Confidence 46899999999999999999999999999985
|
|
| >KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PTZ00224 protein phosphatase 2C; Provisional | Back alignment and domain information |
|---|
| >KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg | Back alignment and domain information |
|---|
| >smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain | Back alignment and domain information |
|---|
| >cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity | Back alignment and domain information |
|---|
| >PRK14559 putative protein serine/threonine phosphatase; Provisional | Back alignment and domain information |
|---|
| >KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B | Back alignment and domain information |
|---|
| >smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases | Back alignment and domain information |
|---|
| >TIGR02865 spore_II_E stage II sporulation protein E | Back alignment and domain information |
|---|
| >PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg | Back alignment and domain information |
|---|
| >COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 271 | ||||
| 1a6q_A | 382 | Crystal Structure Of The Protein SerineTHREONINE PH | 4e-07 | ||
| 3fxj_A | 390 | Crystal Structure Of Human Protein Phosphatase 1a ( | 5e-07 | ||
| 3jrq_A | 326 | Crystal Structure Of (+)-aba-bound Pyl1 In Complex | 1e-06 | ||
| 3nmn_B | 319 | Crystal Structure Of Pyrabactin-Bound Abscisic Acid | 1e-06 | ||
| 3kdj_B | 316 | Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le | 2e-06 | ||
| 4da1_A | 389 | Crystal Structure Of Branched-Chain Alpha-Ketoacid | 2e-05 | ||
| 2iq1_A | 274 | Crystal Structure Of Human Ppm1k Length = 274 | 2e-05 | ||
| 2i0o_A | 304 | Crystal Structure Of Anopheles Gambiae SerTHR PHOSP | 1e-04 | ||
| 2p8e_A | 307 | Crystal Structure Of The SerineTHREONINE PHOSPHATAS | 2e-04 | ||
| 3nmv_B | 324 | Crystal Structure Of Pyrabactin-Bound Abscisic Acid | 3e-04 |
| >pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 | Back alignment and structure |
|
| >pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 | Back alignment and structure |
| >pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 | Back alignment and structure |
| >pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 | Back alignment and structure |
| >pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 | Back alignment and structure |
| >pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 | Back alignment and structure |
| >pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 | Back alignment and structure |
| >pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 | Back alignment and structure |
| >pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 | Back alignment and structure |
| >pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 271 | |||
| 2iq1_A | 274 | Protein phosphatase 2C kappa, PPM1K; structural ge | 7e-34 | |
| 1a6q_A | 382 | Phosphatase 2C; catalytic mechanism, metalloenzyme | 7e-33 | |
| 2p8e_A | 307 | PPM1B beta isoform variant 6; structural genomics, | 7e-33 | |
| 4da1_A | 389 | Protein phosphatase 1K, mitochondrial; metal-ION-a | 2e-32 | |
| 2i0o_A | 304 | Ser/Thr phosphatase; beta sandwich, structural gen | 1e-29 | |
| 3kdj_B | 316 | Protein phosphatase 2C 56; ABA, PYL1, abscisic aci | 2e-28 | |
| 3qn1_B | 337 | Protein phosphatase 2C 16; start domain, BET V dom | 5e-28 | |
| 2i44_A | 324 | Serine-threonine phosphatase 2C; PSI-2, 8817Z, str | 7e-28 | |
| 3d8k_A | 377 | PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR | 6e-22 | |
| 2j4o_A | 401 | Mitogen-activated protein kinase kinase kinase 7-i | 1e-16 | |
| 2irm_A | 358 | Mitogen-activated protein kinase kinase kinase 7 i | 5e-16 | |
| 2isn_A | 364 | NYSGXRC-8828Z, phosphatase; pathogenic strain, pra | 8e-15 | |
| 2pk0_A | 250 | Serine/threonine protein phosphatase STP1; SI moti | 6e-08 | |
| 1txo_A | 237 | Putative bacterial enzyme; serine/threonine protei | 9e-08 | |
| 3rnr_A | 211 | Stage II sporulation E family protein; structural | 2e-06 | |
| 2pnq_A | 467 | [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 | 8e-05 | |
| 2jfr_A | 234 | Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata | 2e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 | |
| 2j82_A | 240 | TPPHA, protein serine-threonine phosphatase; PP2C | 3e-04 |
| >2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 7e-34
Identities = 45/229 (19%), Positives = 89/229 (38%), Gaps = 42/229 (18%)
Query: 80 FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLGARAKARDAGKADEK- 138
+F V+D G + A F +H + + + L A+L +
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADA 96
Query: 139 --WRAGS--ASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKR--------- 185
+G+ ++ +G +LV+A++G+ RA++CR G +++ HT +R
Sbjct: 97 TLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLT--IDHTPERKDEKERIKK 154
Query: 186 -----------HW--------SRKLFSGTKHSKGSELA----VGAEKID-SDTEFVLIAS 221
+R + G K S + K+ +D F+++ +
Sbjct: 155 CGGFVAWNSLGQPHVNGRLAMTRSI--GDLDLKTSGVIAEPETKRIKLHHADDSFLVLTT 212
Query: 222 TGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRF 270
GI ++ +QE + D EAA + ++A+ + N + VVV F
Sbjct: 213 DGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 261
|
| >1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 | Back alignment and structure |
|---|
| >2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
| >4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 | Back alignment and structure |
|---|
| >2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 | Back alignment and structure |
|---|
| >3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 | Back alignment and structure |
|---|
| >3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 | Back alignment and structure |
|---|
| >2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 | Back alignment and structure |
|---|
| >3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 | Back alignment and structure |
|---|
| >2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 | Back alignment and structure |
|---|
| >2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 | Back alignment and structure |
|---|
| >2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 | Back alignment and structure |
|---|
| >2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 | Back alignment and structure |
|---|
| >1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 | Back alignment and structure |
|---|
| >3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 | Back alignment and structure |
|---|
| >2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 | Back alignment and structure |
|---|
| >2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 271 | |||
| 2p8e_A | 307 | PPM1B beta isoform variant 6; structural genomics, | 100.0 | |
| 3qn1_B | 337 | Protein phosphatase 2C 16; start domain, BET V dom | 100.0 | |
| 2i0o_A | 304 | Ser/Thr phosphatase; beta sandwich, structural gen | 100.0 | |
| 3kdj_B | 316 | Protein phosphatase 2C 56; ABA, PYL1, abscisic aci | 100.0 | |
| 2iq1_A | 274 | Protein phosphatase 2C kappa, PPM1K; structural ge | 100.0 | |
| 1a6q_A | 382 | Phosphatase 2C; catalytic mechanism, metalloenzyme | 100.0 | |
| 2i44_A | 324 | Serine-threonine phosphatase 2C; PSI-2, 8817Z, str | 100.0 | |
| 2j4o_A | 401 | Mitogen-activated protein kinase kinase kinase 7-i | 100.0 | |
| 4da1_A | 389 | Protein phosphatase 1K, mitochondrial; metal-ION-a | 100.0 | |
| 2isn_A | 364 | NYSGXRC-8828Z, phosphatase; pathogenic strain, pra | 100.0 | |
| 2irm_A | 358 | Mitogen-activated protein kinase kinase kinase 7 i | 100.0 | |
| 3d8k_A | 377 | PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR | 100.0 | |
| 2pk0_A | 250 | Serine/threonine protein phosphatase STP1; SI moti | 100.0 | |
| 2pnq_A | 467 | [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 | 100.0 | |
| 1txo_A | 237 | Putative bacterial enzyme; serine/threonine protei | 100.0 | |
| 2j82_A | 240 | TPPHA, protein serine-threonine phosphatase; PP2C | 100.0 | |
| 2jfr_A | 234 | Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata | 100.0 | |
| 3rnr_A | 211 | Stage II sporulation E family protein; structural | 100.0 | |
| 3t91_A | 242 | Stage II sporulation protein E; SPOIIE, phosphatas | 99.88 | |
| 3pu9_A | 242 | Protein serine/threonine phosphatase; PSI-biology, | 99.86 | |
| 3zt9_A | 193 | Serine phosphatase; hydrolase, signal transduction | 99.8 | |
| 3f79_A | 255 | Probable two-component response regulator; adaptor | 99.77 | |
| 3ke6_A | 399 | Protein RV1364C/MT1410; anti-sigma factor, anti-si | 99.28 | |
| 3eq2_A | 394 | Probable two-component response regulator; adaptor | 98.73 |
| >2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=331.48 Aligned_cols=226 Identities=20% Similarity=0.328 Sum_probs=192.4
Q ss_pred CceeeEEEeccccCCCCCCCCCCCceEEEeccccC-CCceEEEEEecCCCchHHHHHHHHHhHHHHhCCCCc--------
Q 043371 40 TPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLD-EIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQI-------- 110 (271)
Q Consensus 40 ~~~~~g~~s~~G~r~~~~~r~~neD~~~~~~~~~~-~~~~~l~~V~DG~gG~~aa~~~~~~l~~~~~~~~~~-------- 110 (271)
..+.||+++++|.|+ .|||++++....+. ..+..+|+|||||||+.+|+++++.+.+.+.+...+
T Consensus 22 ~~~~~~~~s~~G~R~------~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~ 95 (307)
T 2p8e_A 22 NGLRYGLSSMQGWRV------EMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGS 95 (307)
T ss_dssp TTEEEEEEEEEETSS------SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-------
T ss_pred CCeeEEEEecCCCCC------cccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccc
Confidence 578999999999988 89999988654321 136789999999999999999999999998763322
Q ss_pred -----hhhHHHHHHHHHHHHHHHHHhhcCCC-ccCCCcee-EEEEEeCCEEEEEEccCceEEEEeCCeEEECCCCCCCh-
Q 043371 111 -----RRKSKDTLKKAYLGARAKARDAGKAD-EKWRAGSA-SVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHT- 182 (271)
Q Consensus 111 -----~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~gtT-~~~~i~~~~l~vanvGDSr~~l~~~g~~~~lt~dH~~~- 182 (271)
...+.++|+++|..+|+.+.+..... ....+||| +++++.++++|+|||||||+|++|+|++.+||.||++.
T Consensus 96 ~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~ 175 (307)
T 2p8e_A 96 ALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCN 175 (307)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTS
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCC
Confidence 23568899999999999998865422 23468999 99999999999999999999999999999999999999
Q ss_pred -hHHHHHHH--------hcCC---CC------------------CCccccceEEEEEecCCCcEEEEEeCCCCCCcChHH
Q 043371 183 -AKRHWSRK--------LFSG---TK------------------HSKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQE 232 (271)
Q Consensus 183 -~e~~ri~~--------~~~g---l~------------------~~v~~~p~i~~~~l~~~~~~liL~SDGlwd~l~~~e 232 (271)
.|+.||.+ +++| ++ +++.++|++..+++.++|+|||||||||||+++++|
T Consensus 176 ~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~e 255 (307)
T 2p8e_A 176 PREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEE 255 (307)
T ss_dssp HHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHH
T ss_pred HHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHH
Confidence 78889887 2333 22 335789999999999887799999999999999999
Q ss_pred HHHHHHc----cCCHHHHHHHHHHHHHhcCCCCCeEEEEEEcC
Q 043371 233 AVSLIRH----IGDAQEAAECLAKEALTRMSRSNISCVVVRFD 271 (271)
Q Consensus 233 i~~~v~~----~~~~~~~a~~L~~~A~~~g~~DNiTvivv~l~ 271 (271)
+++++.. ..+++++|+.|++.|+.+|+.||||||||++.
T Consensus 256 i~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~ 298 (307)
T 2p8e_A 256 LCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFS 298 (307)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC-
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECC
Confidence 9999986 57899999999999999999999999999874
|
| >3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* | Back alignment and structure |
|---|
| >2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* | Back alignment and structure |
|---|
| >2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
| >1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A | Back alignment and structure |
|---|
| >2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} | Back alignment and structure |
|---|
| >2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A | Back alignment and structure |
|---|
| >4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A | Back alignment and structure |
|---|
| >2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} | Back alignment and structure |
|---|
| >2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} | Back alignment and structure |
|---|
| >3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} | Back alignment and structure |
|---|
| >2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A | Back alignment and structure |
|---|
| >1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A | Back alignment and structure |
|---|
| >2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A | Back alignment and structure |
|---|
| >2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A | Back alignment and structure |
|---|
| >3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} | Back alignment and structure |
|---|
| >3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* | Back alignment and structure |
|---|
| >3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
| >3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} | Back alignment and structure |
|---|
| >3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A | Back alignment and structure |
|---|
| >3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 271 | ||||
| d1a6qa2 | 295 | d.219.1.1 (A:2-296) Protein serine/threonine phosp | 1e-19 | |
| d1txoa_ | 235 | d.219.1.1 (A:) putative serine/threonine phosphata | 2e-13 |
| >d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PP2C-like superfamily: PP2C-like family: PP2C-like domain: Protein serine/threonine phosphatase 2C, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.9 bits (206), Expect = 1e-19
Identities = 48/255 (18%), Positives = 91/255 (35%), Gaps = 47/255 (18%)
Query: 64 DSVVVQREQLDEIELW-FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKS-------- 114
D+ +E W FF V+D G VA++ H D + +
Sbjct: 37 DAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENV 96
Query: 115 KDTLKKAYLGARAKA-RDAGKADEKWRAGS-ASVMVINGEKLVIANMGEYRAVVCRDGVA 172
K+ ++ +L + K R+GS A ++I+ + N G+ R ++CR+
Sbjct: 97 KNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKV 156
Query: 173 HQISSGRQHTAKRHWSRKLFSGTK-------------HSKGSELAVGA------------ 207
H + + + R +G + G
Sbjct: 157 HFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSP 216
Query: 208 -------EKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHI----GDAQEAAECLAKEALT 256
E+ + D +F+++A GIW+VM N+E +R D ++ + L
Sbjct: 217 EPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY 276
Query: 257 RMSRSNISCVVVRFD 271
+ SR N+S +++ F
Sbjct: 277 KGSRDNMSVILICFP 291
|
| >d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 271 | |||
| d1a6qa2 | 295 | Protein serine/threonine phosphatase 2C, catalytic | 100.0 | |
| d1txoa_ | 235 | putative serine/threonine phosphatase pstp/ppp {My | 100.0 |
| >d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PP2C-like superfamily: PP2C-like family: PP2C-like domain: Protein serine/threonine phosphatase 2C, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-50 Score=348.36 Aligned_cols=228 Identities=20% Similarity=0.346 Sum_probs=195.8
Q ss_pred CCCceeeEEEeccccCCCCCCCCCCCceEEEeccccCC-CceEEEEEecCCCchHHHHHHHHHhHHHHhCCCC-------
Q 043371 38 WMTPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLDE-IELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQ------- 109 (271)
Q Consensus 38 ~~~~~~~g~~s~~G~r~~~~~r~~neD~~~~~~~~~~~-~~~~l~~V~DG~gG~~aa~~~~~~l~~~~~~~~~------- 109 (271)
....+.||+++++|+|+ +|||++.+..+.+.. ++..||||||||||+.+|++++++|++.+.+...
T Consensus 17 ~~~~~~~g~~s~~G~R~------~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~ 90 (295)
T d1a6qa2 17 QGNGLRYGLSSMQGWRV------EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGA 90 (295)
T ss_dssp EETTEEEEEEEEEETSS------SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSS
T ss_pred cCCceEEEEEeCccCCC------cccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 33568999999999999 899999887765432 4678999999999999999999999998876532
Q ss_pred -chhhHHHHHHHHHHHHHHHHHhhcCC-CccCCCcee-EEEEEeCCEEEEEEccCceEEEEeCCeEEECCCCCCCh--hH
Q 043371 110 -IRRKSKDTLKKAYLGARAKARDAGKA-DEKWRAGSA-SVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHT--AK 184 (271)
Q Consensus 110 -~~~~~~~~l~~~~~~~~~~l~~~~~~-~~~~~~gtT-~~~~i~~~~l~vanvGDSr~~l~~~g~~~~lt~dH~~~--~e 184 (271)
..+.+.++|+++|..+++.+...... .....+||| +++++.++++|+|||||||+|+++++.+++||.||+|. .|
T Consensus 91 ~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E 170 (295)
T d1a6qa2 91 PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLE 170 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHH
Confidence 22468899999999999988754432 234568999 99999999999999999999999999999999999999 89
Q ss_pred HHHHHH--------hcCC---------------------CCCCccccceEEEEEecC-CCcEEEEEeCCCCCCcChHHHH
Q 043371 185 RHWSRK--------LFSG---------------------TKHSKGSELAVGAEKIDS-DTEFVLIASTGIWEVMKNQEAV 234 (271)
Q Consensus 185 ~~ri~~--------~~~g---------------------l~~~v~~~p~i~~~~l~~-~~~~liL~SDGlwd~l~~~ei~ 234 (271)
+.||.. +++| ..+.++++|++..+++.. +++|||||||||||+|+++|++
T Consensus 171 ~~Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~ 250 (295)
T d1a6qa2 171 KERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELC 250 (295)
T ss_dssp HHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHH
T ss_pred HhhHhhcCCcccccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHH
Confidence 999988 3333 124588999999999875 4679999999999999999999
Q ss_pred HHHHc----cCCHHHHHHHHHHHHHhcCCCCCeEEEEEEcC
Q 043371 235 SLIRH----IGDAQEAAECLAKEALTRMSRSNISCVVVRFD 271 (271)
Q Consensus 235 ~~v~~----~~~~~~~a~~L~~~A~~~g~~DNiTvivv~l~ 271 (271)
++++. ..+++.+|+.|++.|+.+++.||||||||+|+
T Consensus 251 ~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~ 291 (295)
T d1a6qa2 251 DFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP 291 (295)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECT
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEecc
Confidence 99865 47899999999999999999999999999985
|
| >d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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