Citrus Sinensis ID: 043371


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
MGLRDLHLKLKAFRLRRLLIGAGPSKKRQYGIAKKQSWMTPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLGARAKARDAGKADEKWRAGSASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSRKLFSGTKHSKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRFD
ccHHHHHHHHHHHHHcHHHcccccccccEEEEEcccccccEEcEEEEEEEccccccccccccccEEEEEccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEEcccccccccHHHHHHHHccccccccccccEEEEEEEcccccEEEEEccccccccccHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEcc
ccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEcEEEEEcccccccccccHcHHEEEEEcccccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEcccccEEEEcccEEEEcccccccccHHHHHHHHHccccEEccccccEEEEEcccccEEEEEEcccHHHHcccHHHHHHHHccccHHHHHHHHHHHHHcccccccEEEEEEEEc
MGLRDLHLKLKAFRLRRLLIgagpskkrqygiakkqswmtpishgyhvvedqscrgdldvsdcdsvVVQREQLDEIELWFFGVFDAQVGDSVARFMQShffdrklkpsqirRKSKDTLKKAYLGARAKardagkadekwraGSASVMVINGEKLVIANMGEYRAVVCRDGvahqissgrqhtakrhwsrklfsgtkhskgselavgaekidsdtEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRFD
mglrdlhlKLKAFRLRrlligagpskkrqygiAKKQSWMTPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQShffdrklkpsqirrkskdtlKKAYlgarakardagkadekwragsasvmvINGEKLVIANMGEYRAVVCRDGVAHQissgrqhtakrhwsrklfsgtkhskgselavgaekidsdtEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEAltrmsrsniscvvvrfd
MGLRDlhlklkafrlrrllIGAGPSKKRQYGIAKKQSWMTPISHGYHVVEDQSCRGdldvsdcdsvvvQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLgarakardagkadEKWRAGSASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSRKLFSGTKHSKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRFD
*****LHLKLKAFRLRRLLIGAGPSKKRQYGIAKKQSWMTPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDR***********************************WRAGSASVMVINGEKLVIANMGEYRAVVCRDGVAHQIS****************************VGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVV***
*******LKL*******************************ISHGYHVVEDQSC*****VSDCDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLGARAKARD**********GSASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSRKLFSGTKHSKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRFD
MGLRDLHLKLKAFRLRRLLIGAGPSKKRQYGIAKKQSWMTPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLG*****************GSASVMVINGEKLVIANMGEYRAVVCRDGVAHQ************WSRKLFSGTKHSKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRFD
*GLRDLHLKLKAFRLRRLLIG******************TPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLGARAKARDAGKAD*KWRAGSASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSRKLFSGTKHSKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRFD
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGLRDLHLKLKAFRLRRLLIGAGPSKKRQYGIAKKQSWMTPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLGARAKARDAGKADEKWRAGSASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKRHWSRKLFSGTKHSKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRFD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query271 2.2.26 [Sep-21-2011]
Q9LW60260 Putative protein phosphat yes no 0.922 0.961 0.483 7e-66
Q9LDA7289 Probable protein phosphat no no 0.900 0.844 0.330 1e-31
Q93YW5283 Probable protein phosphat no no 0.926 0.886 0.321 2e-31
Q0D673290 Probable protein phosphat yes no 0.952 0.889 0.313 3e-31
Q0JAA0321 Probable protein phosphat no no 0.826 0.697 0.316 1e-28
Q9SIU8290 Probable protein phosphat no no 0.863 0.806 0.332 1e-28
O64583339 Probable protein phosphat no no 0.778 0.622 0.300 7e-24
Q9LME4281 Probable protein phosphat no no 0.708 0.683 0.334 2e-23
Q8L7I4283 Probable protein phosphat no no 0.708 0.678 0.330 2e-22
Q4PSE8 447 Probable protein phosphat no no 0.704 0.427 0.286 2e-22
>sp|Q9LW60|P2C44_ARATH Putative protein phosphatase 2C-like protein 44 OS=Arabidopsis thaliana GN=At3g23360 PE=5 SV=1 Back     alignment and function desciption
 Score =  250 bits (639), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 135/279 (48%), Positives = 184/279 (65%), Gaps = 29/279 (10%)

Query: 1   MGLRDLHLKLKAFRLRRLLIGAGPSKKRQYGIAKKQSWMTPISHGYHVVEDQSCRGDLDV 60
           MG  DL   LKAFR RRL++  G  +K+     KK  W+TP+SHGY+ V D+    D + 
Sbjct: 1   MGFLDLPFMLKAFRFRRLVVEDGKRRKK-----KKPLWLTPVSHGYYTV-DRLSYAD-NS 53

Query: 61  SDCDSVVVQREQL-DEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLK 119
           S+ DSV VQREQ  DE+E+W FGV +A  G  + ++MQ+H FD+      I RK K+T++
Sbjct: 54  SNDDSVFVQREQQSDELEIWLFGVSNAGTGKEIVKYMQNHLFDKLPNELGIMRKCKETMR 113

Query: 120 KAYLGARAKARDAGKADEKWRAGSASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGR 179
           +AY+            +E+    +ASVMV+NGEKL IA++G++R VVC+DG AHQI   +
Sbjct: 114 RAYV-----------EEERTGGSAASVMVVNGEKLAIASIGDHRVVVCKDGEAHQIRDRK 162

Query: 180 QHTAKRHWSRKLFSGTKH--------SKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQ 231
             T  +HWS+ +F              + SEL V  EKI+SDTEF++I S GIWEVMK+Q
Sbjct: 163 AST--KHWSQFIFPVCNQGEEEDESDPRNSELVVITEKINSDTEFIIIGSPGIWEVMKSQ 220

Query: 232 EAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRF 270
           EA++LIRHI D +EAA+CLAKEAL R+S+S+ISCVV+RF
Sbjct: 221 EAINLIRHIEDPKEAAKCLAKEALNRISKSSISCVVIRF 259





Arabidopsis thaliana (taxid: 3702)
>sp|Q9LDA7|P2C39_ARATH Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1 Back     alignment and function description
>sp|Q93YW5|P2C58_ARATH Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1 Back     alignment and function description
>sp|Q0D673|P2C62_ORYSJ Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1 Back     alignment and function description
>sp|Q0JAA0|P2C44_ORYSJ Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIU8|P2C20_ARATH Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3 Back     alignment and function description
>sp|O64583|P2C28_ARATH Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=2 Back     alignment and function description
>sp|Q9LME4|P2C09_ARATH Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1 Back     alignment and function description
>sp|Q8L7I4|P2C17_ARATH Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1 Back     alignment and function description
>sp|Q4PSE8|P2C71_ARATH Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
255575867282 protein phosphatase 2c, putative [Ricinu 0.996 0.957 0.696 1e-109
224102197282 predicted protein [Populus trichocarpa] 0.996 0.957 0.667 1e-102
147853132294 hypothetical protein VITISV_021550 [Viti 1.0 0.921 0.615 4e-99
359477668289 PREDICTED: putative protein phosphatase 1.0 0.937 0.619 4e-98
224110592266 predicted protein [Populus trichocarpa] 0.948 0.966 0.662 6e-97
357441117274 Protein phosphatase 2C [Medicago truncat 0.996 0.985 0.603 1e-90
356574766277 PREDICTED: putative protein phosphatase 0.963 0.942 0.593 2e-90
388504806274 unknown [Medicago truncatula] 0.996 0.985 0.6 6e-90
357452383274 hypothetical protein MTR_2g077900 [Medic 0.996 0.985 0.589 7e-90
356533759277 PREDICTED: putative protein phosphatase 0.977 0.956 0.602 4e-89
>gi|255575867|ref|XP_002528831.1| protein phosphatase 2c, putative [Ricinus communis] gi|223531743|gb|EEF33565.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/283 (69%), Positives = 227/283 (80%), Gaps = 13/283 (4%)

Query: 1   MGLRDLHLKLKAFRLRRLLIGAGPSKKRQYGIAKKQSWMTPISHGYHVVEDQSCRGDLDV 60
           MGL+DLHLKLKAFRL+R LI  G  KKR   + KK SW  PISHGYHVVEDQS  G  D 
Sbjct: 1   MGLKDLHLKLKAFRLKRFLIRDG-GKKRTSNMTKKPSWAMPISHGYHVVEDQSFGGGSDY 59

Query: 61  SDCDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKK 120
           S+  SVVVQREQ+ E+ELWFFGVFDA++GD V +++QSH FDR  K SQIRRKSK+T++K
Sbjct: 60  SNSASVVVQREQIQELELWFFGVFDARIGDGVTKYLQSHLFDRNPKESQIRRKSKETMRK 119

Query: 121 AYLGARAKARDAGKA-DEKWRAGSASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGR 179
           AYLGARAK ++  K+ DE WR GSASVMVINGEKLVIANMG+YR VVCRDGVAHQ+ S  
Sbjct: 120 AYLGARAKIKETPKSEDETWRVGSASVMVINGEKLVIANMGDYRVVVCRDGVAHQVRSKH 179

Query: 180 QHTAKRHWSRKLFS-----------GTKHSKGSELAVGAEKIDSDTEFVLIASTGIWEVM 228
           Q T KRHWSR+LF            G+K SKGSEL +GAEKIDSDTEFV+IASTGIWEVM
Sbjct: 180 QETTKRHWSRRLFPGMLALKFSKAGGSKESKGSELVIGAEKIDSDTEFVIIASTGIWEVM 239

Query: 229 KNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRFD 271
           KNQEAV+LIRH+ D Q AAECL+KEALTRM++SN SCV++RFD
Sbjct: 240 KNQEAVNLIRHMDDPQAAAECLSKEALTRMTKSNSSCVIIRFD 282




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102197|ref|XP_002312585.1| predicted protein [Populus trichocarpa] gi|222852405|gb|EEE89952.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147853132|emb|CAN80687.1| hypothetical protein VITISV_021550 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477668|ref|XP_002281570.2| PREDICTED: putative protein phosphatase 2C-like protein 44-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224110592|ref|XP_002315569.1| predicted protein [Populus trichocarpa] gi|222864609|gb|EEF01740.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357441117|ref|XP_003590836.1| Protein phosphatase 2C [Medicago truncatula] gi|355479884|gb|AES61087.1| Protein phosphatase 2C [Medicago truncatula] Back     alignment and taxonomy information
>gi|356574766|ref|XP_003555516.1| PREDICTED: putative protein phosphatase 2C-like protein 44-like [Glycine max] Back     alignment and taxonomy information
>gi|388504806|gb|AFK40469.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357452383|ref|XP_003596468.1| hypothetical protein MTR_2g077900 [Medicago truncatula] gi|355485516|gb|AES66719.1| hypothetical protein MTR_2g077900 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356533759|ref|XP_003535427.1| PREDICTED: putative protein phosphatase 2C-like protein 44-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
TAIR|locus:2121373283 AT4G28400 [Arabidopsis thalian 0.516 0.494 0.294 4.3e-32
TAIR|locus:2087095289 AT3G15260 [Arabidopsis thalian 0.560 0.525 0.267 3.8e-31
TAIR|locus:2046046290 PIA1 "PP2C induced by AVRRPM1" 0.516 0.482 0.287 9.3e-30
TAIR|locus:2061579339 AT2G34740 [Arabidopsis thalian 0.494 0.395 0.296 1.1e-23
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.232 0.202 0.523 2.1e-23
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.232 0.140 0.476 2.7e-22
TAIR|locus:2194734283 AT1G78200 [Arabidopsis thalian 0.284 0.272 0.462 1.7e-21
TAIR|locus:2008341282 AT1G34750 [Arabidopsis thalian 0.254 0.244 0.463 1.1e-20
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.232 0.177 0.460 2.7e-20
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.258 0.188 0.436 4.1e-17
TAIR|locus:2121373 AT4G28400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 193 (73.0 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
 Identities = 43/146 (29%), Positives = 77/146 (52%)

Query:    31 GIAKKQSWMTPISHGYHVVEDQSCRGXXXXXXXXXXXXQREQLDEIELWFFGVFDAQVGD 90
             G  K + W   I+HG+H V     +G            + ++L+  EL  F +FD  +G 
Sbjct:    24 GRGKSKMWKN-ITHGFHCV-----KGKSSHPMEDYVVSEFKKLEGHELGLFAIFDGHLGH 77

Query:    91 SVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLXXXXXXXXXXXXXEKWRAGSASVMVIN 150
              VA+++Q++ FD  LK       +++ ++ AY               K  + + + ++I+
Sbjct:    78 DVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQSLKLGKGGSTAVTGILID 137

Query:   151 GEKLVIANMGEYRAVVCRDGVAHQIS 176
             G+KLV+AN+G+ RAV+ ++GVAHQ+S
Sbjct:   138 GKKLVVANVGDSRAVMSKNGVAHQLS 163


GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005575 "cellular_component" evidence=ND
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
TAIR|locus:2087095 AT3G15260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046046 PIA1 "PP2C induced by AVRRPM1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061579 AT2G34740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194734 AT1G78200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008341 AT1G34750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0D673P2C62_ORYSJ3, ., 1, ., 3, ., 1, 60.31330.95200.8896yesno
Q9LW60P2C44_ARATHNo assigned EC number0.48380.92250.9615yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 3e-32
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 8e-32
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-23
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 2e-19
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-13
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
 Score =  118 bits (298), Expect = 3e-32
 Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 37/242 (15%)

Query: 63  CDSVVVQREQLDEIELWFFGVFDAQVGDSVARFMQSHFFDR-----KLKPSQIRRKSKDT 117
            D+VV++    +E     FGVFD   G +   F      +      +   +      ++ 
Sbjct: 16  EDAVVIKPNLNNEDGG-LFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEA 74

Query: 118 LKKAYLGARAKARDAGKAD-EKWRAGS-ASVMVINGEKLVIANMGEYRAVVCRDGVAHQI 175
           L+KA+L A  +  +  + + +  R+G+ A V +I G KL +AN+G+ RAV+CR+G A Q+
Sbjct: 75  LRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQL 134

Query: 176 SSGRQHT------AKRHWSRKLFS---------------GTKHSKGSELA---VGAEKID 211
           +  + H        +R                       G    K    A   V   K+ 
Sbjct: 135 T--KDHKPVNEEERERIEKAGGRVSNGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLT 192

Query: 212 SDTEFVLIASTGIWEVMKNQEAVSLIRH---IGDAQEAAECLAKEALTRMSRSNISCVVV 268
            D +F+++AS G+W+V+ NQEAV ++R      D QEAA+ L   AL R S  NI+ VVV
Sbjct: 193 EDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRGSHDNITVVVV 252

Query: 269 RF 270
           R 
Sbjct: 253 RL 254


Length = 254

>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 271
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.96
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.91
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.87
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.84
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.78
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.67
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.53
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.64
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
Probab=100.00  E-value=6e-48  Score=344.86  Aligned_cols=226  Identities=26%  Similarity=0.412  Sum_probs=192.7

Q ss_pred             CceeeEEEeccccCCCCCCCCCCCceEEEecccc--------CCCceEEEEEecCCCchHHHHHHHHHhHHHHhCCCCch
Q 043371           40 TPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQL--------DEIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQIR  111 (271)
Q Consensus        40 ~~~~~g~~s~~G~r~~~~~r~~neD~~~~~~~~~--------~~~~~~l~~V~DG~gG~~aa~~~~~~l~~~~~~~~~~~  111 (271)
                      .-+.+|.++.+|.|+      .|||++++..++.        ......||||||||||+.++++++++|++.+.+...+.
T Consensus        63 ~~~~~~~~s~~G~R~------~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~  136 (365)
T PLN03145         63 PVVRSGAWADIGSRS------SMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFP  136 (365)
T ss_pred             CceEEEEEccccCCC------CCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccc
Confidence            346889999999887      8999988754321        11246899999999999999999999999998766555


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCCCccCCCcee-EEEEEeCCEEEEEEccCceEEEEeCCeEEECCCCCCCh--hHHHHH
Q 043371          112 RKSKDTLKKAYLGARAKARDAGKADEKWRAGSA-SVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHT--AKRHWS  188 (271)
Q Consensus       112 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT-~~~~i~~~~l~vanvGDSr~~l~~~g~~~~lt~dH~~~--~e~~ri  188 (271)
                      ..+.++|.++|..++.++.+....+....+||| +++++.++++|||||||||+|++++|++++||.||++.  .|++||
T Consensus       137 ~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI  216 (365)
T PLN03145        137 REIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRI  216 (365)
T ss_pred             hhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHH
Confidence            678889999999999999876554444568999 99999999999999999999999999999999999998  788899


Q ss_pred             HH--------hcCC---CCC----------------CccccceEEEEEecCCCcEEEEEeCCCCCCcChHHHHHHHHc--
Q 043371          189 RK--------LFSG---TKH----------------SKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQEAVSLIRH--  239 (271)
Q Consensus       189 ~~--------~~~g---l~~----------------~v~~~p~i~~~~l~~~~~~liL~SDGlwd~l~~~ei~~~v~~--  239 (271)
                      .+        +++|   +++                .++++|++..+.+.++++|||||||||||+|+++++++++..  
T Consensus       217 ~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l  296 (365)
T PLN03145        217 EASGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRL  296 (365)
T ss_pred             HHcCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHH
Confidence            87        3333   221                356899999999998889999999999999999999777643  


Q ss_pred             --cCCHHHHHHHHHHHHHhcCCCCCeEEEEEEcC
Q 043371          240 --IGDAQEAAECLAKEALTRMSRSNISCVVVRFD  271 (271)
Q Consensus       240 --~~~~~~~a~~L~~~A~~~g~~DNiTvivv~l~  271 (271)
                        ..+|+++|+.|++.|+.+++.||+|||||+|+
T Consensus       297 ~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~  330 (365)
T PLN03145        297 QEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQ  330 (365)
T ss_pred             hcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEee
Confidence              46899999999999999999999999999985



>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 4e-07
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 5e-07
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 1e-06
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-06
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-06
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 2e-05
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 2e-05
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 1e-04
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-04
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-04
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure

Iteration: 1

Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 47/242 (19%) Query: 76 IELW-FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIR--------RKSKDTLKKAYLXXX 126 +E W FF V+D G VA++ H D + K+ ++ +L Sbjct: 50 LESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEID 109 Query: 127 XXXXXXXXXXEKW-RAGSASV-MVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAK 184 R+GS +V ++I+ + N G+ R ++CR+ H + + + Sbjct: 110 EHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNP 169 Query: 185 RHWSRKLFSGTK------------------------HSKG-SELAVGAE-------KIDS 212 R +G H KG +E V E + + Sbjct: 170 LEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEE 229 Query: 213 DTEFVLIASTGIWEVMKNQEAVSLIRH----IGDAQEAAECLAKEALTRMSRSNISCVVV 268 D +F+++A GIW+VM N+E +R D ++ + L + SR N+S +++ Sbjct: 230 DDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 289 Query: 269 RF 270 F Sbjct: 290 CF 291
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 7e-34
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 7e-33
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 7e-33
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 2e-32
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-29
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 2e-28
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 5e-28
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 7e-28
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 6e-22
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 1e-16
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 5e-16
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 8e-15
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 6e-08
1txo_A237 Putative bacterial enzyme; serine/threonine protei 9e-08
3rnr_A211 Stage II sporulation E family protein; structural 2e-06
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 8e-05
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 3e-04
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
 Score =  122 bits (309), Expect = 7e-34
 Identities = 45/229 (19%), Positives = 89/229 (38%), Gaps = 42/229 (18%)

Query: 80  FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKSKDTLKKAYLGARAKARDAGKADEK- 138
           +F V+D   G + A F  +H     +      +  +  L  A+L          +     
Sbjct: 37  YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADA 96

Query: 139 --WRAGS--ASVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHTAKR--------- 185
               +G+     ++ +G +LV+A++G+ RA++CR G   +++    HT +R         
Sbjct: 97  TLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLT--IDHTPERKDEKERIKK 154

Query: 186 -----------HW--------SRKLFSGTKHSKGSELA----VGAEKID-SDTEFVLIAS 221
                                +R +  G    K S +         K+  +D  F+++ +
Sbjct: 155 CGGFVAWNSLGQPHVNGRLAMTRSI--GDLDLKTSGVIAEPETKRIKLHHADDSFLVLTT 212

Query: 222 TGIWEVMKNQEAVSLIRHIGDAQEAAECLAKEALTRMSRSNISCVVVRF 270
            GI  ++ +QE    +    D  EAA  + ++A+   +  N + VVV F
Sbjct: 213 DGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 261


>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.88
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.86
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.8
3f79_A255 Probable two-component response regulator; adaptor 99.77
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.28
3eq2_A394 Probable two-component response regulator; adaptor 98.73
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.2e-46  Score=331.48  Aligned_cols=226  Identities=20%  Similarity=0.328  Sum_probs=192.4

Q ss_pred             CceeeEEEeccccCCCCCCCCCCCceEEEeccccC-CCceEEEEEecCCCchHHHHHHHHHhHHHHhCCCCc--------
Q 043371           40 TPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLD-EIELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQI--------  110 (271)
Q Consensus        40 ~~~~~g~~s~~G~r~~~~~r~~neD~~~~~~~~~~-~~~~~l~~V~DG~gG~~aa~~~~~~l~~~~~~~~~~--------  110 (271)
                      ..+.||+++++|.|+      .|||++++....+. ..+..+|+|||||||+.+|+++++.+.+.+.+...+        
T Consensus        22 ~~~~~~~~s~~G~R~------~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~   95 (307)
T 2p8e_A           22 NGLRYGLSSMQGWRV------EMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGS   95 (307)
T ss_dssp             TTEEEEEEEEEETSS------SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-------
T ss_pred             CCeeEEEEecCCCCC------cccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccc
Confidence            578999999999988      89999988654321 136789999999999999999999999998763322        


Q ss_pred             -----hhhHHHHHHHHHHHHHHHHHhhcCCC-ccCCCcee-EEEEEeCCEEEEEEccCceEEEEeCCeEEECCCCCCCh-
Q 043371          111 -----RRKSKDTLKKAYLGARAKARDAGKAD-EKWRAGSA-SVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHT-  182 (271)
Q Consensus       111 -----~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~gtT-~~~~i~~~~l~vanvGDSr~~l~~~g~~~~lt~dH~~~-  182 (271)
                           ...+.++|+++|..+|+.+.+..... ....+||| +++++.++++|+|||||||+|++|+|++.+||.||++. 
T Consensus        96 ~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~  175 (307)
T 2p8e_A           96 ALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCN  175 (307)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTS
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCC
Confidence                 23568899999999999998865422 23468999 99999999999999999999999999999999999999 


Q ss_pred             -hHHHHHHH--------hcCC---CC------------------CCccccceEEEEEecCCCcEEEEEeCCCCCCcChHH
Q 043371          183 -AKRHWSRK--------LFSG---TK------------------HSKGSELAVGAEKIDSDTEFVLIASTGIWEVMKNQE  232 (271)
Q Consensus       183 -~e~~ri~~--------~~~g---l~------------------~~v~~~p~i~~~~l~~~~~~liL~SDGlwd~l~~~e  232 (271)
                       .|+.||.+        +++|   ++                  +++.++|++..+++.++|+|||||||||||+++++|
T Consensus       176 ~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~e  255 (307)
T 2p8e_A          176 PREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEE  255 (307)
T ss_dssp             HHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHH
T ss_pred             HHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHH
Confidence             78889887        2333   22                  335789999999999887799999999999999999


Q ss_pred             HHHHHHc----cCCHHHHHHHHHHHHHhcCCCCCeEEEEEEcC
Q 043371          233 AVSLIRH----IGDAQEAAECLAKEALTRMSRSNISCVVVRFD  271 (271)
Q Consensus       233 i~~~v~~----~~~~~~~a~~L~~~A~~~g~~DNiTvivv~l~  271 (271)
                      +++++..    ..+++++|+.|++.|+.+|+.||||||||++.
T Consensus       256 i~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~  298 (307)
T 2p8e_A          256 LCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFS  298 (307)
T ss_dssp             HHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC-
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECC
Confidence            9999986    57899999999999999999999999999874



>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 271
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 1e-19
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-13
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
 Score = 83.9 bits (206), Expect = 1e-19
 Identities = 48/255 (18%), Positives = 91/255 (35%), Gaps = 47/255 (18%)

Query: 64  DSVVVQREQLDEIELW-FFGVFDAQVGDSVARFMQSHFFDRKLKPSQIRRKS-------- 114
           D+          +E W FF V+D   G  VA++   H  D        +  +        
Sbjct: 37  DAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENV 96

Query: 115 KDTLKKAYLGARAKA-RDAGKADEKWRAGS-ASVMVINGEKLVIANMGEYRAVVCRDGVA 172
           K+ ++  +L         + K     R+GS A  ++I+ +     N G+ R ++CR+   
Sbjct: 97  KNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKV 156

Query: 173 HQISSGRQHTAKRHWSRKLFSGTK-------------HSKGSELAVGA------------ 207
           H  +   + +      R   +G                + G                   
Sbjct: 157 HFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSP 216

Query: 208 -------EKIDSDTEFVLIASTGIWEVMKNQEAVSLIRHI----GDAQEAAECLAKEALT 256
                  E+ + D +F+++A  GIW+VM N+E    +R       D ++    +    L 
Sbjct: 217 EPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY 276

Query: 257 RMSRSNISCVVVRFD 271
           + SR N+S +++ F 
Sbjct: 277 KGSRDNMSVILICFP 291


>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=6.6e-50  Score=348.36  Aligned_cols=228  Identities=20%  Similarity=0.346  Sum_probs=195.8

Q ss_pred             CCCceeeEEEeccccCCCCCCCCCCCceEEEeccccCC-CceEEEEEecCCCchHHHHHHHHHhHHHHhCCCC-------
Q 043371           38 WMTPISHGYHVVEDQSCRGDLDVSDCDSVVVQREQLDE-IELWFFGVFDAQVGDSVARFMQSHFFDRKLKPSQ-------  109 (271)
Q Consensus        38 ~~~~~~~g~~s~~G~r~~~~~r~~neD~~~~~~~~~~~-~~~~l~~V~DG~gG~~aa~~~~~~l~~~~~~~~~-------  109 (271)
                      ....+.||+++++|+|+      +|||++.+..+.+.. ++..||||||||||+.+|++++++|++.+.+...       
T Consensus        17 ~~~~~~~g~~s~~G~R~------~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~   90 (295)
T d1a6qa2          17 QGNGLRYGLSSMQGWRV------EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGA   90 (295)
T ss_dssp             EETTEEEEEEEEEETSS------SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSS
T ss_pred             cCCceEEEEEeCccCCC------cccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhcccccc
Confidence            33568999999999999      899999887765432 4678999999999999999999999998876532       


Q ss_pred             -chhhHHHHHHHHHHHHHHHHHhhcCC-CccCCCcee-EEEEEeCCEEEEEEccCceEEEEeCCeEEECCCCCCCh--hH
Q 043371          110 -IRRKSKDTLKKAYLGARAKARDAGKA-DEKWRAGSA-SVMVINGEKLVIANMGEYRAVVCRDGVAHQISSGRQHT--AK  184 (271)
Q Consensus       110 -~~~~~~~~l~~~~~~~~~~l~~~~~~-~~~~~~gtT-~~~~i~~~~l~vanvGDSr~~l~~~g~~~~lt~dH~~~--~e  184 (271)
                       ..+.+.++|+++|..+++.+...... .....+||| +++++.++++|+|||||||+|+++++.+++||.||+|.  .|
T Consensus        91 ~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E  170 (295)
T d1a6qa2          91 PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLE  170 (295)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHH
Confidence             22468899999999999988754432 234568999 99999999999999999999999999999999999999  89


Q ss_pred             HHHHHH--------hcCC---------------------CCCCccccceEEEEEecC-CCcEEEEEeCCCCCCcChHHHH
Q 043371          185 RHWSRK--------LFSG---------------------TKHSKGSELAVGAEKIDS-DTEFVLIASTGIWEVMKNQEAV  234 (271)
Q Consensus       185 ~~ri~~--------~~~g---------------------l~~~v~~~p~i~~~~l~~-~~~~liL~SDGlwd~l~~~ei~  234 (271)
                      +.||..        +++|                     ..+.++++|++..+++.. +++|||||||||||+|+++|++
T Consensus       171 ~~Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~  250 (295)
T d1a6qa2         171 KERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELC  250 (295)
T ss_dssp             HHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHH
T ss_pred             HhhHhhcCCcccccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHH
Confidence            999988        3333                     124588999999999875 4679999999999999999999


Q ss_pred             HHHHc----cCCHHHHHHHHHHHHHhcCCCCCeEEEEEEcC
Q 043371          235 SLIRH----IGDAQEAAECLAKEALTRMSRSNISCVVVRFD  271 (271)
Q Consensus       235 ~~v~~----~~~~~~~a~~L~~~A~~~g~~DNiTvivv~l~  271 (271)
                      ++++.    ..+++.+|+.|++.|+.+++.||||||||+|+
T Consensus       251 ~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~  291 (295)
T d1a6qa2         251 DFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP  291 (295)
T ss_dssp             HHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECT
T ss_pred             HHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEecc
Confidence            99865    47899999999999999999999999999985



>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure