Citrus Sinensis ID: 043422

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340----
MESIWARGMLVAAAILVIRIQLLAFTGANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQSIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFWPC
cHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHccccEEEEccccHHHHHHHHccccEEEEEcccHHHHHHcccHHHHHHHHHHccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccEEccccccEEEccccccccHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccEEEEEccccccccccccccccccccccccccccccc
cccHccHHHHHHHHHHHHHHHHHHHccccEcEEEccccccccccHHHHHHHHHHHcccEEEEccccHHHHHHccccccEEEEEccHHHHHHHHHcHHHHHHHHHHHccccccccEEEEEEEEEcccHHccHHHHHHHHHHHHHHHHHcccccccEEEEEEEHHHEEEcccHHHcEEcHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHcccccccHHHHccccccccEEEccEEEccHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHccccccccccccEcEEEEccEccccccccHHHHcccEcccccEccccccc
MESIWARGMLVAAAILVIRIQLLAFTGAnvigvnyglngdnlpppeqvIDLYgrcqinfvrlfePRHEVLEALrgrpqllslgtkneEIQSIASSQqasdewvkthvvpfvdnvnigyitvgnevipgtnaqYVGQAINNILNSLnnygitkqikvttvlpgtslassyppsagafTNEAAAVLKDIAQNLwhrgfpiminvypyfayasdpshisldyalfqskdpvvrdgpylYYNLFDAMVDAFHSAlekidvpnvtlaisesgwpsagnepytSIENAQKYNKNLMdhvlggkgtprrpgqtfDTFLFEMFnenqkpagveqnfgffypnmqpiypfwpc
MESIWARGMLVAAAILVIRIQLLAFTGANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQSIASsqqasdewVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFWPC
MESIWARGMLVAAAILVIRIQLLAFTGANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEiqsiassqqasDEWVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFWPC
***IWARGMLVAAAILVIRIQLLAFTGANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLL********************EWVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGW********************LMDHVL**********QTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFW**
***********AAAILVIRIQLLAFTGANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQSIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLG***TPRRPGQTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFWPC
MESIWARGMLVAAAILVIRIQLLAFTGANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQ**********EWVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFWPC
*****ARGMLVAAAILVIRIQLLAFTGANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQSIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFWPC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MESIWARGMLVAAAILVIRIQLLAFTGANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQSIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFWPC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query344 2.2.26 [Sep-21-2011]
Q02439321 Putative glucan endo-1,3- N/A no 0.901 0.965 0.451 1e-70
Q03467370 Glucan endo-1,3-beta-gluc N/A no 0.976 0.908 0.441 6e-69
Q03773347 Glucan endo-1,3-beta-gluc no no 0.938 0.930 0.432 2e-67
P23535348 Glucan endo-1,3-beta-gluc N/A no 0.895 0.885 0.428 2e-65
P07979370 Lichenase OS=Nicotiana pl N/A no 0.956 0.889 0.405 1e-64
P52407374 Glucan endo-1,3-beta-gluc N/A no 0.898 0.826 0.444 2e-64
P52408350 Glucan endo-1,3-beta-gluc N/A no 0.886 0.871 0.435 6e-64
P27666370 Glucan endo-1,3-beta-gluc N/A no 0.938 0.872 0.411 1e-62
P23546370 Glucan endo-1,3-beta-gluc N/A no 0.938 0.872 0.408 1e-62
P15797371 Glucan endo-1,3-beta-gluc N/A no 0.938 0.870 0.408 2e-62
>sp|Q02439|E13F_HORVU Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1 Back     alignment and function desciption
 Score =  266 bits (681), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/317 (45%), Positives = 194/317 (61%), Gaps = 7/317 (2%)

Query: 25  FTGANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGT 84
             G   IGVNYG+ G +LP P++V+ LY    I  VR+F P   VLEALR     + LGT
Sbjct: 1   LAGVEGIGVNYGMMGSDLPSPDKVVALYKANNITDVRIFHPDTNVLEALRNSGLGVVLGT 60

Query: 85  KNEEIQSIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNS 144
            N ++  +AS    +  WV ++V PF   V+  YI  GNEVIPG +A  V  A+ N+  +
Sbjct: 61  LNSDLAPLASDASYAASWVHSYVQPFAGAVSFRYINAGNEVIPGESAALVLPAMKNLEAA 120

Query: 145 LNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYP 204
           L   G++  + VTT +  + L +SYPPS G F+  A   +  I  +L   G P+++NVYP
Sbjct: 121 LQAAGLS--VPVTTAMATSVLGTSYPPSQGTFSEAALPTVGPIVSHLASSGTPLLVNVYP 178

Query: 205 YFAYASDPSHISLDYALFQSKDPV-VRDGPYLYYNLFDAMVDAFHSALEKI-DVPNVTLA 262
           YFAY++DPS + LDYAL  S   V V D    Y N+FDA++DA ++A+EK     ++ L 
Sbjct: 179 YFAYSADPSSVRLDYALLSSSAAVAVTDNGVEYANMFDAILDAVYAAVEKAGGGESLELV 238

Query: 263 ISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPA 322
           +SE+GWPS G     S+ENA  Y  NL+ HV    GTPRRPG+  +T++F MFNENQKP 
Sbjct: 239 VSETGWPSGGGGYGASVENAAAYINNLVRHV---GGTPRRPGKAVETYIFAMFNENQKPE 295

Query: 323 GVEQNFGFFYPNMQPIY 339
           GVEQNFG F P+M  +Y
Sbjct: 296 GVEQNFGMFQPDMSQVY 312
May provide a degree of protection against microbial invasion of germinated barley grain through its ability to degrade fungal cell wall polysaccharides.
Hordeum vulgare (taxid: 4513)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q03467|E13B_PEA Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1 Back     alignment and function description
>sp|Q03773|E13A_SOYBN Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1 Back     alignment and function description
>sp|P23535|E13B_PHAVU Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1 Back     alignment and function description
>sp|P07979|GUB_NICPL Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3 Back     alignment and function description
>sp|P52407|E13B_HEVBR Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2 Back     alignment and function description
>sp|P52408|E13B_PRUPE Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1 Back     alignment and function description
>sp|P27666|E13F_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P23546|E13E_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description
>sp|P15797|E13B_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query344
356518513336 PREDICTED: lichenase-like [Glycine max] 0.968 0.991 0.586 1e-117
449449865 664 PREDICTED: glucan endo-1,3-beta-glucosid 0.927 0.480 0.607 1e-110
224066883320 predicted protein [Populus trichocarpa] 0.918 0.987 0.608 1e-109
357508011338 Glucan endo-1,3-beta-glucosidase [Medica 0.982 1.0 0.531 1e-101
224082216309 predicted protein [Populus trichocarpa] 0.898 1.0 0.581 1e-100
357508015326 Glucan endo-1,3-beta-glucosidase [Medica 0.947 1.0 0.494 1e-91
124359474319 Glycoside hydrolase, family 17 [Medicago 0.927 1.0 0.479 8e-88
192910882339 beta-1,3-glucanase [Elaeis guineensis] 0.950 0.964 0.496 4e-87
192910884339 beta-1,3-glucanase [Elaeis guineensis] 0.904 0.917 0.506 3e-84
15218106363 glycosyl hydrolase family 17 protein [Ar 0.965 0.914 0.477 3e-83
>gi|356518513|ref|XP_003527923.1| PREDICTED: lichenase-like [Glycine max] Back     alignment and taxonomy information
 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 197/336 (58%), Positives = 254/336 (75%), Gaps = 3/336 (0%)

Query: 10  LVAAAILVIRIQLLAFT---GANVIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPR 66
           +VA   ++  I + A T   GA  IGVN GL GDNLP P+++++LY +  I F+R+FEPR
Sbjct: 1   MVALMTIMTMIVMTATTDDDGAQSIGVNLGLTGDNLPSPKEIVELYEKYHIKFIRIFEPR 60

Query: 67  HEVLEALRGRPQLLSLGTKNEEIQSIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVI 126
           H++LEALRG+P +L +GTK+E++Q+IA  Q A++ WV+T+V+P++ +VN  YI +GNEV 
Sbjct: 61  HDILEALRGKPLVLVIGTKDEDVQTIAQDQNAANTWVQTNVIPYIKDVNFRYIIIGNEVT 120

Query: 127 PGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKD 186
           PG  A YV + I N++N+L N GI K IKV+ VL GT LASSYPPSAG FTNE   ++K 
Sbjct: 121 PGPIAAYVAKGIQNMINALTNAGIHKDIKVSAVLKGTVLASSYPPSAGTFTNETTNIIKQ 180

Query: 187 IAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDA 246
           IA  L   G P+MIN YPY AY+SDP H+SLDYALF+S  PVV DG Y YYNLFDAM+DA
Sbjct: 181 IATILLQHGSPMMINSYPYLAYSSDPQHVSLDYALFKSTSPVVTDGSYKYYNLFDAMLDA 240

Query: 247 FHSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQT 306
           +H+A EKI V N+TL +SE+GWPSAG EPYTS  N+Q YNKNL+ HV GGKGTPRRP Q+
Sbjct: 241 YHAAFEKIGVSNLTLVVSETGWPSAGYEPYTSKLNSQAYNKNLVQHVRGGKGTPRRPDQS 300

Query: 307 FDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFW 342
            + F+FEMFNE+ K AG+E NFG FYPN +P+YP +
Sbjct: 301 LNVFIFEMFNEDLKQAGIEHNFGVFYPNKKPVYPLF 336

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449449865|ref|XP_004142685.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224066883|ref|XP_002302261.1| predicted protein [Populus trichocarpa] gi|222843987|gb|EEE81534.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357508011|ref|XP_003624294.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|124359475|gb|ABN05913.1| Glycoside hydrolase, family 17 [Medicago truncatula] gi|355499309|gb|AES80512.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224082216|ref|XP_002306606.1| predicted protein [Populus trichocarpa] gi|222856055|gb|EEE93602.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357508015|ref|XP_003624296.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|355499311|gb|AES80514.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|124359474|gb|ABN05912.1| Glycoside hydrolase, family 17 [Medicago truncatula] Back     alignment and taxonomy information
>gi|192910882|gb|ACF06549.1| beta-1,3-glucanase [Elaeis guineensis] Back     alignment and taxonomy information
>gi|192910884|gb|ACF06550.1| beta-1,3-glucanase [Elaeis guineensis] Back     alignment and taxonomy information
>gi|15218106|ref|NP_177901.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] gi|12323288|gb|AAG51620.1|AC012193_2 putative endo-1,3-beta-glucanase; 56885-55794 [Arabidopsis thaliana] gi|332197904|gb|AEE36025.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query344
TAIR|locus:2203191363 AT1G77780 [Arabidopsis thalian 0.965 0.914 0.468 1.1e-78
TAIR|locus:2203206346 AT1G77790 [Arabidopsis thalian 0.950 0.945 0.448 1.1e-73
TAIR|locus:2149279345 BETAG4 ""beta-1,3-glucanase 4" 0.901 0.898 0.462 5.9e-73
TAIR|locus:2149289354 BG5 "beta-1,3-glucanase 5" [Ar 0.895 0.870 0.455 1.4e-71
TAIR|locus:2149209344 AT5G20390 [Arabidopsis thalian 0.901 0.901 0.439 1.7e-68
TAIR|locus:2196658335 AT1G33220 [Arabidopsis thalian 0.854 0.877 0.445 1.1e-66
TAIR|locus:2149917337 AT5G20560 [Arabidopsis thalian 0.924 0.943 0.403 2e-63
TAIR|locus:2082568340 BG1 ""beta-1,3-glucanase 1"" [ 0.901 0.911 0.425 3.8e-62
TAIR|locus:2116327 455 AT4G26830 [Arabidopsis thalian 0.912 0.690 0.400 2.2e-57
TAIR|locus:2164991 506 AT5G56590 [Arabidopsis thalian 0.965 0.656 0.361 4.6e-57
TAIR|locus:2203191 AT1G77780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 157/335 (46%), Positives = 213/335 (63%)

Query:     9 MLVAAAILVIRIQLLAFTGANVI-GVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRH 67
             M + A +L +  +L      N   GV YG NGDNLP P + + LY +  +  +RL+EP  
Sbjct:     1 MFLIATLLFLSARLTTAGNMNSFAGVCYGRNGDNLPSPAKTVSLYKKINVGGIRLYEPFP 60

Query:    68 EVLEALRGRPQLLSLGTKNEEXXXXXXXXXXXDEWVKTHVVPFVDNVNIGYITVGNEVIP 127
             +++ +L+G   L+++G +NE              W KT + P+  NV   +ITVGNEVI 
Sbjct:    61 DLIVSLQGTGLLVAIGPRNEAIKTLAEEYQFALNWDKTFIAPY-KNVAFNWITVGNEVIE 119

Query:   128 GTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDI 187
             G   +YV QA+ NI  +L   G +K I VTTV+   +LA+SYPPSAG F      ++ +I
Sbjct:   120 GEIGRYVPQAMKNIKAALTEIGNSK-IHVTTVISTAALANSYPPSAGVFKPAITELITEI 178

Query:   188 AQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAF 247
                L     P+M+NVYPYFAYASDPSH+SL+YA F+S  PVV DG Y Y N+FDA +DAF
Sbjct:   179 VSILSSTDSPLMVNVYPYFAYASDPSHVSLEYATFRSTSPVVTDGKYQYTNIFDATLDAF 238

Query:   248 HSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTF 307
             + ALEKI+  +V + ++E+GWP+ GN+PYTS+ENA+ YN+ L+  +  GKGTPRRP    
Sbjct:   239 NVALEKINHGSVKVYVAETGWPTRGNDPYTSVENARAYNQGLLKKLTTGKGTPRRPNVPV 298

Query:   308 DTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFW 342
              TF FEMFNE+ K   VEQ+FGFF PNM P+Y  W
Sbjct:   299 ITFFFEMFNEDLKQGAVEQSFGFFDPNMAPVYDMW 333
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0043169 "cation binding" evidence=IEA
GO:0031225 "anchored to membrane" evidence=TAS
TAIR|locus:2203206 AT1G77790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149279 BETAG4 ""beta-1,3-glucanase 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149289 BG5 "beta-1,3-glucanase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149209 AT5G20390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196658 AT1G33220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149917 AT5G20560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082568 BG1 ""beta-1,3-glucanase 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164991 AT5G56590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.390.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query344
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 1e-109
COG5309305 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohyd 3e-05
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information 
 Score =  321 bits (824), Expect = e-109
 Identities = 146/312 (46%), Positives = 200/312 (64%), Gaps = 5/312 (1%)

Query: 31  IGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQ 90
           IGV YG+ G+NLP P  V+ LY    I  +R+++P  + L+ALRG    + LG  N+++ 
Sbjct: 1   IGVCYGVKGNNLPSPSDVVSLYKSNNIRRMRIYDPDTKALKALRGSGINVILGVPNDDLA 60

Query: 91  SIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGI 150
            +A SQ  +  WV+ +V P+   V I YI VGNEV PGT   ++  A+ NI N+L   G+
Sbjct: 61  ELAGSQSNAASWVQDNVRPYAPKVKIRYIAVGNEVSPGTTQSFLVPAMRNIRNALTAAGL 120

Query: 151 TKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYAS 210
             +IKV+T +    L +S+PPS G+F  E  + +  I   L     P++ NVYPYFAY++
Sbjct: 121 GNKIKVSTSVRFDILGNSFPPSYGSFRVETRSFMDPIIVFLAGTNAPLLANVYPYFAYSN 180

Query: 211 DPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWPS 270
           +P  ISL+YALFQ    VV  G   Y NLFDAMVDA ++ALEK   P+V + +SESGWPS
Sbjct: 181 NPRDISLNYALFQPGTTVVDGG-LGYQNLFDAMVDAVYAALEKAGGPSVEVVVSESGWPS 239

Query: 271 AGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAG-VEQNFG 329
            G     +IENA+ YN+NL++HV   KGTP+RPG   +T++F MF+ENQKP   VE++FG
Sbjct: 240 DGG-FAATIENARTYNQNLINHV--KKGTPKRPGWAIETYVFAMFDENQKPGESVEKHFG 296

Query: 330 FFYPNMQPIYPF 341
            FYPN QP YP 
Sbjct: 297 LFYPNKQPKYPI 308

Length = 310
>gnl|CDD|227625 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 344
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 100.0
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 99.07
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 98.89
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 98.58
PRK10150604 beta-D-glucuronidase; Provisional 98.2
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 98.09
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 97.44
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 97.16
TIGR03356427 BGL beta-galactosidase. 95.74
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 95.72
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 95.08
PRK09936296 hypothetical protein; Provisional 82.75
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 81.0
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=1.6e-88  Score=652.52  Aligned_cols=309  Identities=49%  Similarity=0.833  Sum_probs=254.8

Q ss_pred             eeEeecCCCCCCCCHHHHHHHHhcCCCCEEEEccCChHHHHHHhcCCCeEEEeeCcchhhhhhhhHHHHHHHHHhccccc
Q 043422           31 IGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQSIASSQQASDEWVKTHVVPF  110 (344)
Q Consensus        31 ~GvnYg~~~~n~ps~~~v~~llk~~~~~~VRiY~~d~~vL~A~~~~gi~v~lGv~~~~~~~la~~~~~a~~wv~~~v~~~  110 (344)
                      +|||||+.++|+|+|+++++++|+++|++||||++|+++|+|++++||+|++||+|++++++++++..|..|+++||.+|
T Consensus         1 iGvnyG~~~~nlp~p~~vv~l~ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~~Wv~~nv~~~   80 (310)
T PF00332_consen    1 IGVNYGRVGNNLPSPCKVVSLLKSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAGSWVRTNVLPY   80 (310)
T ss_dssp             EEEEE---SSS---HHHHHHHHHHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHHHHHHHHTCTC
T ss_pred             CeEeccCccCCCCCHHHHHHHHHhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHhhhhhhccccc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccEEEEEecccccCCCChHHHHHHHHHHHHHHHhcCCCCceEEeeeeccceecccCCCCCcccchhHHHHHHHHHHH
Q 043422          111 VDNVNIGYITVGNEVIPGTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQN  190 (344)
Q Consensus       111 ~~~~~I~~I~VGNEvl~~~~~~~Lv~am~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~PPs~g~F~~~~~~~~~~~l~f  190 (344)
                      +|.++|++|+||||++.+.....|+|+|+++|++|++.||+++|||+|+++++++..|||||+|.|++++.++|+++++|
T Consensus        81 ~~~~~i~~i~VGnEv~~~~~~~~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~~~~~~~l~f  160 (310)
T PF00332_consen   81 LPAVNIRYIAVGNEVLTGTDNAYLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIASVMDPLLKF  160 (310)
T ss_dssp             TTTSEEEEEEEEES-TCCSGGGGHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHHHHHHHHHHH
T ss_pred             CcccceeeeecccccccCccceeeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccchhhhhHHHHH
Confidence            99999999999999997544348999999999999999999899999999999999999999999999999999999999


Q ss_pred             HhhcCCceeeccCCcccccCCCCCcCcccccccCCCccccCCCccchhHHHHHHHHHHHHHHHcCCCCccEEEeeccCCC
Q 043422          191 LWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWPS  270 (344)
Q Consensus       191 L~~~~d~~~vNiyPyf~~~~~~~~i~l~~A~f~~~~~~~~~~~~~y~n~fda~~da~~~al~~~g~~~~~vvVtETGWPS  270 (344)
                      |.++++|||+|+||||.+.++|.+++|+||+|++.+... |++++|+|+||+|+|++++||+++|+++++|+||||||||
T Consensus       161 L~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~-D~~~~y~nlfDa~~da~~~a~~~~g~~~~~vvv~ETGWPs  239 (310)
T PF00332_consen  161 LDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVV-DGGLAYTNLFDAMVDAVYAAMEKLGFPNVPVVVGETGWPS  239 (310)
T ss_dssp             HHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SE-ETTEEESSHHHHHHHHHHHHHHTTT-TT--EEEEEE---S
T ss_pred             hhccCCCceeccchhhhccCCcccCCccccccccccccc-ccchhhhHHHHHHHHHHHHHHHHhCCCCceeEEecccccc
Confidence            999999999999999999999999999999999866555 7789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEeecCCCCC-CCCcCceeeecCCCCeeecCCC
Q 043422          271 AGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKP-AGVEQNFGFFYPNMQPIYPFWP  343 (344)
Q Consensus       271 ~G~~~~as~~na~~y~~~li~~~~~~~Gtp~rpg~~~~~y~F~~fDe~wK~-~~~E~~wGlf~~d~~~ky~l~~  343 (344)
                      +|+ .+|+.+||+.|++|+++++.  .|||+||+..+++||||||||+||+ +.+|||||||++||++||+|+|
T Consensus       240 ~G~-~~a~~~nA~~~~~nl~~~~~--~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf~~d~~~ky~~~f  310 (310)
T PF00332_consen  240 AGD-PGATPENAQAYNQNLIKHVL--KGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLFYPDGTPKYDLDF  310 (310)
T ss_dssp             SSS-TTCSHHHHHHHHHHHHHHCC--GBBSSSBSS---EEES-SB--TTSSSSGGGGG--SB-TTSSBSS----
T ss_pred             CCC-CCCCcchhHHHHHHHHHHHh--CCCcccCCCCCeEEEEEEecCcCCCCCcccceeeeECCCCCeecCCCC
Confidence            999 48999999999999999984  8999999989999999999999999 4599999999999999999987

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK09936 hypothetical protein; Provisional Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query344
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 2e-78
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 7e-63
1aq0_A306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 5e-62
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 4e-54
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 3e-52
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 1e-51
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure 
Iteration: 1

 Score =  289 bits (739), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 203/310 (65%), Gaps = 3/310 (0%)
Query: 31  IGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEXX 90
           IGV YG+ G+NLPPP +V+ LY    I  +RL++P    L+ALR     + L     +  
Sbjct: 1   IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60
Query: 91  XXXXXXXXXDEWVKTHVVPFVDNVNIGYITVGNEVIPGTN-AQYVGQAINNILNSLNNYG 149
                     +W++ +VV +  +V+  YI VGNE+IPG++ AQY+  A+ NI N+L++ G
Sbjct: 61  SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAG 120
Query: 150 ITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYA 209
           +  QIKV+T +    L +SYPPSAGAF++ A A L  I Q L   G P+++NVYPYF+Y 
Sbjct: 121 LQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYT 180
Query: 210 SDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWP 269
            +P  ISL YALF +   VV+DG + Y NLFDA+VDA  +ALE++   NV + +SESGWP
Sbjct: 181 GNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWP 240
Query: 270 SAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFG 329
           SAG     S  NAQ YN+NL+ HV  G GTPRRPG+  + ++FEMFNENQK  G+EQNFG
Sbjct: 241 SAGGGAEASTSNAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAGGIEQNFG 298
Query: 330 FFYPNMQPIY 339
            FYPN QP+Y
Sbjct: 299 LFYPNKQPVY 308
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query344
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 1e-102
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 4e-95
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 2e-92
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 2e-90
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 2e-90
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
 Score =  301 bits (771), Expect = e-102
 Identities = 155/312 (49%), Positives = 212/312 (67%), Gaps = 3/312 (0%)

Query: 31  IGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQ 90
           IGV YG+ G+NLPPP +V+ LY    I  +RL++P    L+ALR     + L     ++Q
Sbjct: 1   IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60

Query: 91  SIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVIPGTN-AQYVGQAINNILNSLNNYG 149
           S+AS+  A+ +W++ +VV +  +V+  YI VGNE+IPG++ AQY+  A+ NI N+L++ G
Sbjct: 61  SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAG 120

Query: 150 ITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYA 209
           +  QIKV+T +    L +SYPPSAGAF++ A A L  I Q L   G P+++NVYPYF+Y 
Sbjct: 121 LQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYT 180

Query: 210 SDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWP 269
            +P  ISL YALF +   VV+DG + Y NLFDA+VDA  +ALE++   NV + +SESGWP
Sbjct: 181 GNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWP 240

Query: 270 SAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFG 329
           SAG     S  NAQ YN+NL+ HV  G GTPRRPG+  + ++FEMFNENQK  G+EQNFG
Sbjct: 241 SAGGGAEASTSNAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAGGIEQNFG 298

Query: 330 FFYPNMQPIYPF 341
            FYPN QP+Y  
Sbjct: 299 LFYPNKQPVYQI 310
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query344
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A 555 GAS2P, glycolipid-anchored surface protein 2; glyc 99.86
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.67
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.67
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 99.51
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 99.28
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 98.75
4ekj_A 500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 98.7
3cmg_A 667 Putative beta-galactosidase; structural genomics, 98.67
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 98.61
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 98.61
1w91_A 503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 98.43
1uhv_A 500 Beta-xylosidase; family 39 glycoside hydrolase, xy 98.38
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 98.38
3fn9_A 692 Putative beta-galactosidase; structural genomics, 98.23
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 98.22
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 98.21
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 98.19
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 98.18
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 98.17
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 98.17
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 98.14
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 98.12
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 98.11
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 98.09
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 98.08
3icg_A 515 Endoglucanase D; cellulase, xylanase, carbohydrate 98.07
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 98.06
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 98.06
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 98.03
1wky_A 464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 98.01
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 97.99
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 97.96
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 97.91
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 97.9
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 97.83
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 97.79
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 97.79
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 97.75
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 97.69
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 97.69
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 97.66
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 97.53
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 97.52
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 97.44
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 97.35
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 97.35
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 97.34
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 97.19
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 97.14
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 97.11
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 96.96
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 96.95
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 96.91
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 96.72
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 96.61
2y8k_A 491 Arabinoxylanase, carbohydrate binding family 6; hy 96.61
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 96.54
2c7f_A 513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 96.52
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 96.49
1qw9_A 502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 96.42
1qox_A449 Beta-glucosidase; hydrolase, cellulose degradation 96.42
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 96.38
1e4i_A447 Beta-glucosidase; hydrolase, family 1 glycosyl hyd 96.35
2vrq_A 496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 96.33
3ahx_A453 Beta-glucosidase A; cellulases, glycosyl hydrolase 96.32
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 96.21
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 96.13
2j78_A468 Beta-glucosidase A; family 1, hydrolase, inhibitor 96.12
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 96.03
2d1z_A 436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 96.01
2o9p_A454 Beta-glucosidase B; family 1 glycoside hydrolase; 96.01
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 95.82
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 95.78
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 95.72
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 95.63
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 95.3
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 95.18
2y2w_A 574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 95.01
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 94.88
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 94.66
2xhy_A479 BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, 94.64
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 94.51
1pbg_A468 PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g 94.11
3vny_A 488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 92.79
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 92.14
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 92.09
4aw7_A 591 GH86A beta-porphyranase; hydrolase, porphyran-hexa 92.01
3d3a_A 612 Beta-galactosidase; protein structure initiative I 91.6
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 91.11
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 90.07
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 89.26
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 89.21
3ta9_A458 Glycoside hydrolase family 1; TIM barrel, glucosid 89.05
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 87.31
4ha4_A489 Beta-galactosidase; TIM barrel, beta-glycosidase, 83.46
3vii_A487 Beta-glucosidase; cellulases, glycosyl hydrolase, 82.77
3ug3_A 504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 81.58
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=6.6e-101  Score=736.19  Aligned_cols=311  Identities=43%  Similarity=0.751  Sum_probs=301.1

Q ss_pred             eeeEeecCCCCCCCCHHHHHHHHhcCCCCEEEEccCChHHHHHHhcCCCeEEEeeCcchhhhhhhhHHHHHHHHHhcccc
Q 043422           30 VIGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQSIASSQQASDEWVKTHVVP  109 (344)
Q Consensus        30 ~~GvnYg~~~~n~ps~~~v~~llk~~~~~~VRiY~~d~~vL~A~~~~gi~v~lGv~~~~~~~la~~~~~a~~wv~~~v~~  109 (344)
                      .+|||||+.++|+|+|++|+++||++||++||||++|+++|+||+++||+|+|||||+++++++ ++++|.+||++||.+
T Consensus         1 ~iGvnyG~~~~nlp~p~~vv~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n~~l~~la-~~~~A~~WV~~nV~~   79 (316)
T 3em5_A            1 EVGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQSLT-NPSNAKSWVQKNVRG   79 (316)
T ss_dssp             CCEEECCCCCTTCCCHHHHHHHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECGGGHHHHT-SHHHHHHHHHHHTGG
T ss_pred             CeeEEcCcCCCCCCCHHHHHHHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEecccchhhhcc-CHHHHHHHHHHhhhh
Confidence            3799999999999999999999999999999999999999999999999999999999999999 889999999999999


Q ss_pred             cCCCccEEEEEecccccCC-CC----hHHHHHHHHHHHHHHHhcCCCCceEEeeeeccceecccCCCCCcccchhHHHHH
Q 043422          110 FVDNVNIGYITVGNEVIPG-TN----AQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVL  184 (344)
Q Consensus       110 ~~~~~~I~~I~VGNEvl~~-~~----~~~Lv~am~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~PPs~g~F~~~~~~~~  184 (344)
                      |+|+++|++|+||||++++ +.    +++|+|+|+++|++|+++||+++|||||++++++|.+|||||+|.|++|+.++|
T Consensus        80 y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~~~~  159 (316)
T 3em5_A           80 FWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYL  159 (316)
T ss_dssp             GTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGHHHH
T ss_pred             cCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCCCCCceechhHHHHH
Confidence            9999999999999999984 33    889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCceeeccCCcccccCCCCCcCcccccccCCCccccCCCccchhHHHHHHHHHHHHHHHcCCCCccEEEe
Q 043422          185 KDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAIS  264 (344)
Q Consensus       185 ~~~l~fL~~~~d~~~vNiyPyf~~~~~~~~i~l~~A~f~~~~~~~~~~~~~y~n~fda~~da~~~al~~~g~~~~~vvVt  264 (344)
                      +|+|+||.+++||||+|+||||+|..+|++|+++||||++++.+++|++++|+||||+|+|++++||+|+|+++++|+||
T Consensus       160 ~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v~V~  239 (316)
T 3em5_A          160 NPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVS  239 (316)
T ss_dssp             HHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCCSSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTTCCEEEE
T ss_pred             HHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccCCCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCceEec
Confidence            99999999999999999999999999999999999999998899999999999999999999999999999999999999


Q ss_pred             eccCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEeecCCCCCCCCcCceeeecCCCCeeecCCCC
Q 043422          265 ESGWPSAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFWPC  344 (344)
Q Consensus       265 ETGWPS~G~~~~as~~na~~y~~~li~~~~~~~Gtp~rpg~~~~~y~F~~fDe~wK~~~~E~~wGlf~~d~~~ky~l~~~  344 (344)
                      ||||||+|+. +||++||++|+++++||+  +.|||+|||..+++|||+||||+||+++.|+|||||++|++|||+|+|+
T Consensus       240 EtGWPs~G~~-~as~~na~~y~~~li~~~--~~GTP~rp~~~~~~y~F~lfDe~~K~~~~E~~~Glf~~d~~~ky~l~~~  316 (316)
T 3em5_A          240 ESGWPSAGAF-AATFDNGRTYLSNLIQHV--KRGTPKRPKRAIETYLFAMFDENKKQPEVEKHFGLFFPNKWQKYNLNFS  316 (316)
T ss_dssp             EECCCSSSST-TCCHHHHHHHHHHHHHHT--TSCCSSSCSSCCCEEESCSBCCTTCSSGGGGCCCSBCTTSCBSSCCCCC
T ss_pred             cccCCCCCCC-CCCHHHHHHHHHHHHHhc--cCCCCCCCCCCceEEEEEeecCCCCCCCCCceeeEECCCCCEeecCCCC
Confidence            9999999985 999999999999999998  6899999998899999999999999977999999999999999999985
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A Back     alignment and structure
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* Back     alignment and structure
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 344
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 1e-110
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 1e-102
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 1e-95
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

 Score =  321 bits (823), Expect = e-110
 Identities = 155/312 (49%), Positives = 212/312 (67%), Gaps = 3/312 (0%)

Query: 31  IGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQ 90
           IGV YG+ G+NLPPP +V+ LY    I  +RL++P    L+ALR     + L     ++Q
Sbjct: 1   IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60

Query: 91  SIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVIPGTN-AQYVGQAINNILNSLNNYG 149
           S+AS+  A+ +W++ +VV +  +V+  YI VGNE+IPG++ AQY+  A+ NI N+L++ G
Sbjct: 61  SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAG 120

Query: 150 ITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYA 209
           +  QIKV+T +    L +SYPPSAGAF++ A A L  I Q L   G P+++NVYPYF+Y 
Sbjct: 121 LQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYT 180

Query: 210 SDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWP 269
            +P  ISL YALF +   VV+DG + Y NLFDA+VDA  +ALE++   NV + +SESGWP
Sbjct: 181 GNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWP 240

Query: 270 SAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFG 329
           SAG     S  NAQ YN+NL+ HV  G GTPRRPG+  + ++FEMFNENQK  G+EQNFG
Sbjct: 241 SAGGGAEASTSNAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAGGIEQNFG 298

Query: 330 FFYPNMQPIYPF 341
            FYPN QP+Y  
Sbjct: 299 LFYPNKQPVYQI 310
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query344
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 99.29
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 99.26
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 99.09
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 98.96
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 98.78
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 98.77
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 98.6
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 98.54
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 98.31
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 98.31
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 98.3
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 98.29
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 98.13
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 98.12
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 98.0
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 97.93
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 97.93
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 97.9
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 97.89
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 97.79
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 97.51
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 97.44
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 97.11
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 96.95
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 96.74
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 96.48
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 96.28
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 96.18
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 96.1
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 95.97
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 95.95
d1pbga_468 6-phospho-beta-D-galactosidase, PGAL {Lactococcus 95.73
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 95.58
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 95.44
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 95.34
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 93.18
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 92.82
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 88.07
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 85.34
d2f6ka1306 Putative amidohydrolase LP2961 {Lactobacillus plan 84.69
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 84.58
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 83.58
d2v3ga1273 Endoglucanase H N-terminal domain {Clostridium the 83.13
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 83.06
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

Probab=100.00  E-value=1.5e-90  Score=664.95  Aligned_cols=311  Identities=50%  Similarity=0.873  Sum_probs=302.3

Q ss_pred             eeEeecCCCCCCCCHHHHHHHHhcCCCCEEEEccCChHHHHHHhcCCCeEEEeeCcchhhhhhhhHHHHHHHHHhccccc
Q 043422           31 IGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLLSLGTKNEEIQSIASSQQASDEWVKTHVVPF  110 (344)
Q Consensus        31 ~GvnYg~~~~n~ps~~~v~~llk~~~~~~VRiY~~d~~vL~A~~~~gi~v~lGv~~~~~~~la~~~~~a~~wv~~~v~~~  110 (344)
                      +|||||++|+||||++||+++||++||++||+|++|++||+|++++||+|||||||+++.+++++++.|.+|++++|.+|
T Consensus         1 ~gi~yg~~~~nlps~~~vv~lLk~~~i~~IRlY~~d~~vL~A~~~tgi~v~lGv~n~~l~~~~~~~~~a~~wv~~~v~~~   80 (312)
T d2cyga1           1 IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAY   80 (312)
T ss_dssp             CEEECCCCCSSCCCHHHHHHHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECHHHHHHHHHCTTHHHHHHHHHTGGG
T ss_pred             CeeeCCCccCCCCCHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEeeccchhhhccCCHHHHHHHHHHHHhcc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccEEEEEecccccC-CCChHHHHHHHHHHHHHHHhcCCCCceEEeeeeccceecccCCCCCcccchhHHHHHHHHHH
Q 043422          111 VDNVNIGYITVGNEVIP-GTNAQYVGQAINNILNSLNNYGITKQIKVTTVLPGTSLASSYPPSAGAFTNEAAAVLKDIAQ  189 (344)
Q Consensus       111 ~~~~~I~~I~VGNEvl~-~~~~~~Lv~am~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~PPs~g~F~~~~~~~~~~~l~  189 (344)
                      ++.++|++|+||||++. ++.+..++|+|+++|++|+++|+.+.|+++|+++++++..|+|||++.|++++.+.|+++++
T Consensus        81 ~~~~~I~~IaVGNE~l~~~~~~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~~~~~~~s~p~sa~~~~~~~~~~l~~~~~  160 (312)
T d2cyga1          81 WPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQ  160 (312)
T ss_dssp             TTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCSSGGGCCBCHHHHHHHHHHHH
T ss_pred             CCCceEEEEEecCEEeeCCcCchhhcccHHHHHHHHHHCCCCCCceeeeeeeeeccccCCCCccccccchhHHHHHHHHH
Confidence            99999999999999998 45688999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCceeeccCCcccccCCCCCcCcccccccCCCccccCCCccchhHHHHHHHHHHHHHHHcCCCCccEEEeeccCC
Q 043422          190 NLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVRDGPYLYYNLFDAMVDAFHSALEKIDVPNVTLAISESGWP  269 (344)
Q Consensus       190 fL~~~~d~~~vNiyPyf~~~~~~~~i~l~~A~f~~~~~~~~~~~~~y~n~fda~~da~~~al~~~g~~~~~vvVtETGWP  269 (344)
                      ||+.++|||++|+||||++..+|..++++||+|++.+..+.+++..|+|+||+|+|++++||+++|+++++|+|+|||||
T Consensus       161 fl~~~~~~~~~n~ypy~~~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~~d~~~d~~~~a~~~~g~~~~~ivI~EtGWP  240 (312)
T d2cyga1         161 FLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWP  240 (312)
T ss_dssp             HHHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEEECCC
T ss_pred             HHHhcCCeeeEeccchhhhccCcccccchhhhccCCCccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCcc
Confidence            99999999999999999999999999999999999888889999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCcccEEEEEeecCCCCCCCCcCceeeecCCCCeeecCCC
Q 043422          270 SAGNEPYTSIENAQKYNKNLMDHVLGGKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFGFFYPNMQPIYPFWP  343 (344)
Q Consensus       270 S~G~~~~as~~na~~y~~~li~~~~~~~Gtp~rpg~~~~~y~F~~fDe~wK~~~~E~~wGlf~~d~~~ky~l~~  343 (344)
                      |+|+.+.||++||++|++++++|+  +.|||+||+.++++||||||||+||++++|+|||||++||++||+|+|
T Consensus       241 s~G~~~~as~~na~~y~~~l~~~~--~~gtp~~~~~~i~~f~FeaFDE~wK~G~~E~~wGlf~~d~~~ky~l~f  312 (312)
T d2cyga1         241 SAGGGAEASTSNAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAGGIEQNFGLFYPNKQPVYQISF  312 (312)
T ss_dssp             SSSSSTTSSHHHHHHHHHHHHHHG--GGCCSSSCSSCCCEEESCSBCCTTSCSSGGGCCCSBCTTSCBSSCCCC
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHH--hcCCCCCCCCCccEEEEeEeCCCCCCCCccCccccCCCCCCEecCCCC
Confidence            999988899999999999999998  679999999999999999999999998899999999999999999998
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure