Citrus Sinensis ID: 043437

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420------
MATVNASAISFLILCLSSLSITEAKGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSVNRVSHFDPAIITPNTAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK
cccHHHHHHHHHHHHHHcccEEcccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEcccccEEEEEEEccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEccccccccccccEEEEEEEcccccccccccEEEEccccccHHHHHHccccccccEEEccccccccccEEEEEcccccccccccEEcccccccccccEEEEEEEEEEccEEEEccccccccEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEcccEEEEccccEEEEEccccEEEEEEccccccEEEEEEEEEEEEEEEccccEEEEccccccc
cHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEccccccEEEEEEcccccEEEEccccccccccccccccccccccccccccccHHHHHcccccccccccEEEEEEEcccccccEEEEEEEEEEcccccccEEcccEEEEEcccccccEEcccccEEEcccccEEEHHHcccccccEEEEEEEcccccccccEEEEcccccccccccEEccEEccccccEEEEEEEEEEEccEEEEEccccccEEEEEcccEEEEccHHHHHHHHHHHHHHHccccccccccEEEEEEEccccccccEEEEEEccccccccHHHEEEEEcccEEEEEEccccccEEEEHHHHccEEEEEEccccEEEEccccccc
MATVNASAISFLILCLSSLsiteakggfsldlirrdapkspfyspdetyHQRVTKALKRSvnrvshfdpaiitpntAQADIISALGEYVmnisigtppVEILAIADtgsdliwtqckpctecykqaapffdpeqsstykdlscdsrqctayertscsteetceysatygdrsfsngnLAVETVTlgstngrpaALRNIIfgcghnddgtfnenatgivglgGGSVSLVTQMgssiggkfsyclvpflssessskinfgsngvvsgtgvvttplvakdpdtfYFLTLESIsvgkkkihfddasegniiidsgttltflppdiVSKLTSAVSDlikadpisdpegvldlcypyssdfkapqitvhfsgadvvlspentfirtsdtsvcftfkgmegqsiYGNLAQANflvgydtkaktvsfkptdcsk
MATVNASAISFLILCLSSLSITEAKGGFSLDLIRRDAPKSpfyspdetyHQRVTKALKRSVNRvshfdpaiitpntAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAyertscsteeTCEYSAtygdrsfsnGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIkadpisdpegVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKaktvsfkptdcsk
MATVNASAisflilclsslsiTEAKGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSVNRVSHFDPAIITPNTAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAyertscsteetceysatyGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIvglgggsvslvTQMGSSIGGKFSYCLVPFLSSESSSKINFgsngvvsgtgvvttPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK
******SAISFLILCLSSLSITEAKGGFSLDLIRR************TYHQRVTKALKRSVNRVSHFDPAIITPNTAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFD******YKDLSCDSRQCTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFLSSE**SKINFGSNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKT**********
****NASAISFLILCLSSLSI*****GFSLDLIRRDA**********************************************ALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTA*****CSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFL*******INF*SNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSD*I********EGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCS*
MATVNASAISFLILCLSSLSITEAKGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSVNRVSHFDPAIITPNTAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK
MATVNASAISFLILCLSSLSITEAKGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSVNRVSHFDPAIITPNTAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDC**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATVNASAISFLILCLSSLSITEAKGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSVNRVSHFDPAIITPNTAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query426 2.2.26 [Sep-21-2011]
Q6XBF8437 Aspartic proteinase CDR1 no no 0.946 0.922 0.592 1e-129
Q3EBM5447 Probable aspartic proteas no no 0.976 0.930 0.469 1e-100
Q766C3437 Aspartic proteinase nepen N/A no 0.903 0.881 0.364 1e-65
Q766C2438 Aspartic proteinase nepen N/A no 0.894 0.869 0.344 1e-62
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.910 0.825 0.320 2e-47
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.767 0.654 0.368 6e-47
Q9LZL3453 Aspartic proteinase PCS1 no no 0.739 0.695 0.288 4e-27
Q9S9K4475 Aspartic proteinase-like no no 0.776 0.696 0.257 6e-24
Q9LX20528 Aspartic proteinase-like no no 0.753 0.607 0.265 9e-19
Q0IU52410 Aspartic proteinase Asp1 no no 0.762 0.792 0.237 1e-15
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  463 bits (1191), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/412 (59%), Positives = 301/412 (73%), Gaps = 9/412 (2%)

Query: 23  EAKGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSVNRVSHFDPAIITPNTAQADII 82
           + K GF+ DLI RD+PKSPFY+P ET  QR+  A+ RSVNRV HF     TP   Q D+ 
Sbjct: 26  KPKLGFTADLIHRDSPKSPFYNPMETSSQRLRNAIHRSVNRVFHFTEKDNTPQ-PQIDLT 84

Query: 83  SALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLS 142
           S  GEY+MN+SIGTPP  I+AIADTGSDL+WTQC PC +CY Q  P FDP+ SSTYKD+S
Sbjct: 85  SNSGEYLMNVSIGTPPFPIMAIADTGSDLLWTQCAPCDDCYTQVDPLFDPKTSSTYKDVS 144

Query: 143 CDSRQCTAYE-RTSCSTEE-TCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIF 200
           C S QCTA E + SCST + TC YS +YGD S++ GN+AV+T+TLGS++ RP  L+NII 
Sbjct: 145 CSSSQCTALENQASCSTNDNTCSYSLSYGDNSYTKGNIAVDTLTLGSSDTRPMQLKNIII 204

Query: 201 GCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFLSS-ESSSKINFGS 259
           GCGHN+ GTFN+  +GIVGLGGG VSL+ Q+G SI GKFSYCLVP  S  + +SKINFG+
Sbjct: 205 GCGHNNAGTFNKKGSGIVGLGGGPVSLIKQLGDSIDGKFSYCLVPLTSKKDQTSKINFGT 264

Query: 260 NGVVSGTGVVTTPLVAK-DPDTFYFLTLESISVGKKKIHFDDASEG----NIIIDSGTTL 314
           N +VSG+GVV+TPL+AK   +TFY+LTL+SISVG K+I +  +       NIIIDSGTTL
Sbjct: 265 NAIVSGSGVVSTPLIAKASQETFYYLTLKSISVGSKQIQYSGSDSESSEGNIIIDSGTTL 324

Query: 315 TFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPE 374
           T LP +  S+L  AV+  I A+   DP+  L LCY  + D K P IT+HF GADV L   
Sbjct: 325 TLLPTEFYSELEDAVASSIDAEKKQDPQSGLSLCYSATGDLKVPVITMHFDGADVKLDSS 384

Query: 375 NTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426
           N F++ S+  VCF F+G    SIYGN+AQ NFLVGYDT +KTVSFKPTDC+K
Sbjct: 385 NAFVQVSEDLVCFAFRGSPSFSIYGNVAQMNFLVGYDTVSKTVSFKPTDCAK 436
Involved in salicylic acid-dependent inducible resistance responses. May release an endogenous peptide elicitor required for the activation of inducible resistance mechanisms. Possesses protease activity in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query426
255566010439 Aspartic proteinase nepenthesin-1 precur 0.997 0.968 0.582 1e-137
297805038440 predicted protein [Arabidopsis lyrata su 0.948 0.918 0.611 1e-134
224130878440 predicted protein [Populus trichocarpa] 0.981 0.95 0.541 1e-132
224126551440 predicted protein [Populus trichocarpa] 0.995 0.963 0.548 1e-131
15217764431 aspartyl protease-like protein [Arabidop 0.943 0.932 0.588 1e-128
15242803437 aspartyl protease family protein [Arabid 0.946 0.922 0.592 1e-128
116831531438 unknown [Arabidopsis thaliana] 0.946 0.920 0.592 1e-128
225427550439 PREDICTED: probable aspartic protease At 0.983 0.954 0.505 1e-121
225427554447 PREDICTED: probable aspartic protease At 0.981 0.935 0.528 1e-119
357492389434 Aspartic proteinase nepenthesin-1 [Medic 0.971 0.953 0.520 1e-118
>gi|255566010|ref|XP_002523993.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223536720|gb|EEF38361.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/436 (58%), Positives = 327/436 (75%), Gaps = 11/436 (2%)

Query: 2   ATVNASAISFLILCLSSLSITEAKGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSV 61
           A+V+  AI  LI   + + I  AK GF+++LI RD+PKSPFY+P ET  QR+  A++RS+
Sbjct: 3   ASVSLLAIVTLIFSGTLVPIDAAKDGFTVELINRDSPKSPFYNPRETPTQRIVSAVRRSM 62

Query: 62  NRVSHFDP---AIITPNTAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKP 118
           +RV HF P   + I  +TAQ+++IS  GEY+M  S+GTP  +ILAIADTGSDLIWTQCKP
Sbjct: 63  SRVHHFSPTKNSDIFTDTAQSEMISNQGEYLMKFSLGTPAFDILAIADTGSDLIWTQCKP 122

Query: 119 CTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAY-ERTSCSTE--ETCEYSATYGDRSFSN 175
           C +CY+Q AP FDP+ SSTY+D+SC ++QC    E  SCS E  +TC YS +YGDRSF++
Sbjct: 123 CDQCYEQDAPLFDPKSSSTYRDISCSTKQCDLLKEGASCSGEGNKTCHYSYSYGDRSFTS 182

Query: 176 GNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSI 235
           GN+A +T+TLGST+GRP  L   I GCGHN+ G+F E  +GIVGLGGG +SL++Q+GS+I
Sbjct: 183 GNVAADTITLGSTSGRPVLLPKAIIGCGHNNGGSFTEKGSGIVGLGGGPISLISQLGSTI 242

Query: 236 GGKFSYCLVPFLSSES-SSKINFGSNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKK 294
            GKFSYCLVP  S+ + SSK+NFGSNG+VSG GV +TPL++KDPDTFYFLTLE++SVG +
Sbjct: 243 DGKFSYCLVPLSSNATNSSKLNFGSNGIVSGGGVQSTPLISKDPDTFYFLTLEAVSVGSE 302

Query: 295 KIHFDDAS----EGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYP 350
           +I F  +S    EGNIIIDSGTTLT  P D  S+L+SAV D +   P+ DP G+L LCY 
Sbjct: 303 RIKFPGSSFGTSEGNIIIDSGTTLTLFPEDFFSELSSAVQDAVAGTPVEDPSGILSLCYS 362

Query: 351 YSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGY 410
             +D K P IT HF GADV L+P NTF++ SDT +CF F  +   +I+GNLAQ NFLVGY
Sbjct: 363 IDADLKFPSITAHFDGADVKLNPLNTFVQVSDTVLCFAFNPINSGAIFGNLAQMNFLVGY 422

Query: 411 DTKAKTVSFKPTDCSK 426
           D + KTVSFKPTDC++
Sbjct: 423 DLEGKTVSFKPTDCTQ 438

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297805038|ref|XP_002870403.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316239|gb|EFH46662.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224130878|ref|XP_002320947.1| predicted protein [Populus trichocarpa] gi|222861720|gb|EEE99262.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224126551|ref|XP_002329582.1| predicted protein [Populus trichocarpa] gi|222870291|gb|EEF07422.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15217764|ref|NP_176663.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|5042418|gb|AAD38257.1|AC006193_13 Hypothetical Protein [Arabidopsis thaliana] gi|332196174|gb|AEE34295.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15242803|ref|NP_198319.1| aspartyl protease family protein [Arabidopsis thaliana] gi|75130158|sp|Q6XBF8.1|CDR1_ARATH RecName: Full=Aspartic proteinase CDR1; AltName: Full=Protein CONSTITUTIVE DISEASE RESISTANCE 1; Flags: Precursor gi|37935737|gb|AAP72988.1| CDR1 [Arabidopsis thaliana] gi|91806924|gb|ABE66189.1| aspartyl protease family protein [Arabidopsis thaliana] gi|109946613|gb|ABG48485.1| At5g33340 [Arabidopsis thaliana] gi|332006513|gb|AED93896.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|116831531|gb|ABK28718.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225427550|ref|XP_002266461.1| PREDICTED: probable aspartic protease At2g35615 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225427554|ref|XP_002266533.1| PREDICTED: probable aspartic protease At2g35615-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357492389|ref|XP_003616483.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355517818|gb|AES99441.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query426
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.941 0.917 0.534 5.3e-111
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.943 0.932 0.514 9.2e-107
TAIR|locus:504955954447 AT2G35615 [Arabidopsis thalian 0.643 0.612 0.427 5.4e-94
TAIR|locus:2206184445 AT1G31450 [Arabidopsis thalian 0.638 0.611 0.411 8e-89
TAIR|locus:2057831396 AT2G28010 [Arabidopsis thalian 0.748 0.805 0.380 2.3e-55
TAIR|locus:2046158392 AT2G28030 [Arabidopsis thalian 0.765 0.831 0.391 4.8e-55
TAIR|locus:2062809756 AT2G28220 [Arabidopsis thalian 0.767 0.432 0.360 2.7e-53
TAIR|locus:2046228395 AT2G28040 [Arabidopsis thalian 0.765 0.825 0.378 1.3e-52
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.908 0.839 0.336 4.6e-50
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.917 0.806 0.314 3.4e-45
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
 Identities = 219/410 (53%), Positives = 268/410 (65%)

Query:    25 KGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSVNRVSHFDPAIITPNTAQADIISA 84
             K GF+ DLI RD+PKSPFY+P ET  QR+  A+ RSVNRV HF     TP   Q D+ S 
Sbjct:    28 KLGFTADLIHRDSPKSPFYNPMETSSQRLRNAIHRSVNRVFHFTEKDNTPQP-QIDLTSN 86

Query:    85 LGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCD 144
              GEY+MN+SIGTPP  I+AIADTGSDL+WTQC PC +CY Q  P FDP+ SSTYKD+SC 
Sbjct:    87 SGEYLMNVSIGTPPFPIMAIADTGSDLLWTQCAPCDDCYTQVDPLFDPKTSSTYKDVSCS 146

Query:   145 SRQCTAXXXXXXXXXXXXX--XXXXXGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGC 202
             S QCTA                    GD S++ GN+AV+T+TLGS++ RP  L+NII GC
Sbjct:   147 SSQCTALENQASCSTNDNTCSYSLSYGDNSYTKGNIAVDTLTLGSSDTRPMQLKNIIIGC 206

Query:   203 GHNDDGTFNENATGIXXXXXXXXXXXTQMGSSIGGKFSYCLVPFLSS-ESSSKINFXXXX 261
             GHN+ GTFN+  +GI            Q+G SI GKFSYCLVP  S  + +SKINF    
Sbjct:   207 GHNNAGTFNKKGSGIVGLGGGPVSLIKQLGDSIDGKFSYCLVPLTSKKDQTSKINFGTNA 266

Query:   262 XXXXXXXXXXPLVAK-DPDTFYFLTLESISVGKKKIHFD----DASEGNIIIDSGTTLTF 316
                       PL+AK   +TFY+LTL+SISVG K+I +     ++SEGNIIIDSGTTLT 
Sbjct:   267 IVSGSGVVSTPLIAKASQETFYYLTLKSISVGSKQIQYSGSDSESSEGNIIIDSGTTLTL 326

Query:   317 LPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENT 376
             LP +  S+L  AV+  I A+   DP+  L LCY  + D K P IT+HF GADV L   N 
Sbjct:   327 LPTEFYSELEDAVASSIDAEKKQDPQSGLSLCYSATGDLKVPVITMHFDGADVKLDSSNA 386

Query:   377 FIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426
             F++ S+  VCF F+G    SIYGN+AQ NFLVGYDT +KTVSFKPTDC+K
Sbjct:   387 FVQVSEDLVCFAFRGSPSFSIYGNVAQMNFLVGYDTVSKTVSFKPTDCAK 436
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA;ISS;IDA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=IMP;IDA
GO:0010337 "regulation of salicylic acid metabolic process" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0048046 "apoplast" evidence=IDA
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057831 AT2G28010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046158 AT2G28030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062809 AT2G28220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046228 AT2G28040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.766
3rd Layer3.4.23.120.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query426
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 0.0
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 7e-90
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-74
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-49
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 2e-25
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 2e-23
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 1e-21
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 8e-14
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 3e-13
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 5e-13
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 6e-12
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 9e-11
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 2e-08
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 9e-06
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 3e-05
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 4e-05
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 6e-05
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 3e-04
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 4e-04
cd05487326 cd05487, renin_like, Renin stimulates production o 0.004
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  642 bits (1659), Expect = 0.0
 Identities = 267/430 (62%), Positives = 331/430 (76%), Gaps = 10/430 (2%)

Query: 6   ASAISFLILCLSSLSITEA-KGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSVNRV 64
           +  ++  +   S LS  EA KGGF++DLI RD+PKSPFY+P ET  QR+  A +RS++RV
Sbjct: 2   SVLLALCLFSFSELSAAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRV 61

Query: 65  SHFDPAIITPNTAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYK 124
           +HF P   +PN  Q+D+IS  GEY+MNISIGTPPV ILAIADTGSDLIWTQCKPC +CYK
Sbjct: 62  NHFRPTDASPNDPQSDLISNGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYK 121

Query: 125 QAAPFFDPEQSSTYKDLSCDSRQCTAYER-TSCSTEETCEYSATYGDRSFSNGNLAVETV 183
           Q +P FDP++SSTYKD+SCDS QC A     SCS E TC YS +YGD SF+ GNLAVET+
Sbjct: 122 QVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSFTKGNLAVETL 181

Query: 184 TLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCL 243
           T+GST+GRP +   I+FGCGHN+ GTF+E  +GIVGLGGG +SL++Q+GSSIGGKFSYCL
Sbjct: 182 TIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYCL 241

Query: 244 VPFLSSES--SSKINFGSNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHF--- 298
           VP  SS+S  +SKINFG+N +VSG+GVV+TPLV+KDPDTFY+LTLE+ISVG KK+ +   
Sbjct: 242 VPL-SSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGS 300

Query: 299 --DDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFK 356
             +   EGNIIIDSGTTLT LP D  S+L SAV + I  + +SDP+G+L LCY  +SD K
Sbjct: 301 SKNGVEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTSDIK 360

Query: 357 APQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKT 416
            P IT HF+GADV L P NTF++ S+  VCF        +I+GNLAQ NFLVGYD ++KT
Sbjct: 361 LPIITAHFTGADVKLQPLNTFVKVSEDLVCFAMIPTSSIAIFGNLAQMNFLVGYDLESKT 420

Query: 417 VSFKPTDCSK 426
           VSFKPTDC+K
Sbjct: 421 VSFKPTDCTK 430

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 426
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.92
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.91
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.23
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.27
PF1365090 Asp_protease_2: Aspartyl protease 96.9
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 95.7
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.17
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.13
COG3577215 Predicted aspartyl protease [General function pred 94.02
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 93.31
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 92.26
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 90.56
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 90.5
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 86.58
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 85.59
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 81.22
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.3e-76  Score=583.56  Aligned_cols=413  Identities=64%  Similarity=1.110  Sum_probs=348.0

Q ss_pred             HHhhhccccc-cCCceEEEEecCCCCCCCCCCCCCChHHHHHHHHhhhhhhhccccccccCCCCccceeecCCccEEEEE
Q 043437           14 LCLSSLSITE-AKGGFSLDLIRRDAPKSPFYSPDETYHQRVTKALKRSVNRVSHFDPAIITPNTAQADIISALGEYVMNI   92 (426)
Q Consensus        14 ~~~~~~~~~~-~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i   92 (426)
                      +.+..+.... +..+++++|+||+++++|++.+..+..++++++++++.+|.+++..+......+..+...++++|+++|
T Consensus        10 ~~~~~~~~~~~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Y~v~i   89 (431)
T PLN03146         10 FSFSELSAAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDASPNDPQSDLISNGGEYLMNI   89 (431)
T ss_pred             HHHhhhhhccccCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccccCCccccCcccCCccEEEEE
Confidence            4444444444 778999999999999999988888888999999999999998875442222345555567788999999


Q ss_pred             EeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCC-CCCCCCCceeeeEeCCC
Q 043437           93 SIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERT-SCSTEETCEYSATYGDR  171 (426)
Q Consensus        93 ~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~-~c~~~~~~~~~~~Y~~g  171 (426)
                      .||||||++.|++||||+++||+|.+|..|..+.++.|||++|+||+.++|+++.|+..... .|..++.|.|.+.|+||
T Consensus        90 ~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~c~y~i~Ygdg  169 (431)
T PLN03146         90 SIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDG  169 (431)
T ss_pred             EcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCCCeeEEEeCCC
Confidence            99999999999999999999999999999988889999999999999999999999877765 48776779999999999


Q ss_pred             CeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCCCCCCceeEeeCCCCCchhhhcccccCCeeEEeecCCCCC-C
Q 043437          172 SFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFLSS-E  250 (426)
Q Consensus       172 ~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~sl~~ql~~~~~~~Fs~~l~~~~~~-~  250 (426)
                      +.+.|++++|+|+|++..++...++++.|||++...+.|....+||||||++..|+++|++....++|||||.+...+ .
T Consensus       170 s~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~~~~~~FSycL~~~~~~~~  249 (431)
T PLN03146        170 SFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVPLSSDSN  249 (431)
T ss_pred             CceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhHhhCCcEEEECCCCCCCCC
Confidence            987799999999999865444578999999999887766346899999999999999998765567999999764321 1


Q ss_pred             CcceEEeCCCCccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecC-----CCCCcEEEccCCccccCcHHHHHHH
Q 043437          251 SSSKINFGSNGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDD-----ASEGNIIIDSGTTLTFLPPDIVSKL  325 (426)
Q Consensus       251 ~~G~l~~Gg~~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~-----~~~~~~iiDTGt~~~~lp~~~~~~i  325 (426)
                      ..|.|+||+.+++.+.++.|+|++..+...+|.|+|++|+||++.+.++.     .+.+.+||||||++++||+++|++|
T Consensus       250 ~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~iiDSGTt~t~Lp~~~y~~l  329 (431)
T PLN03146        250 GTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDSGTTLTLLPSDFYSEL  329 (431)
T ss_pred             CcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCcEEEeCCccceecCHHHHHHH
Confidence            47999999976666656899999865446799999999999999877642     1236899999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCCCeEEEEEEcCCCcceechhhhcc
Q 043437          326 TSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQAN  405 (426)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~~~~C~~i~~~~~~~ilG~~fl~~  405 (426)
                      .+++.+++...........+++|+.......+|+|+|+|+|+++.|++++|+++..++..|+++.+....||||+.|||+
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~F~Ga~~~l~~~~~~~~~~~~~~Cl~~~~~~~~~IlG~~~q~~  409 (431)
T PLN03146        330 ESAVEEAIGGERVSDPQGLLSLCYSSTSDIKLPIITAHFTGADVKLQPLNTFVKVSEDLVCFAMIPTSSIAIFGNLAQMN  409 (431)
T ss_pred             HHHHHHHhccccCCCCCCCCCccccCCCCCCCCeEEEEECCCeeecCcceeEEEcCCCcEEEEEecCCCceEECeeeEee
Confidence            99999888644333333345679976444578999999999999999999999887777899987766679999999999


Q ss_pred             EEEEEECCCCEEEEeeCCCCC
Q 043437          406 FLVGYDTKAKTVSFKPTDCSK  426 (426)
Q Consensus       406 ~y~vfD~~~~~igfa~~~c~~  426 (426)
                      +|++||++++|||||+++|++
T Consensus       410 ~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        410 FLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             EEEEEECCCCEEeeecCCcCc
Confidence            999999999999999999985

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query426
2rmp_A361 Rmp-Pepstatin A Complex Length = 361 5e-05
4aa9_A320 Camel Chymosin At 1.6a Resolution Length = 320 3e-04
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 6e-04
1tzs_A351 Crystal Structure Of An Activation Intermediate Of 7e-04
1mpp_A361 X-Ray Analyses Of Aspartic Proteinases. V. Structur 8e-04
>pdb|2RMP|A Chain A, Rmp-Pepstatin A Complex Length = 361 Back     alignment and structure 
Iteration: 1

 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 85  LGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYK-QAAPFFDPEQSSTYK 139
           L EY + +SIGTP  + L + DTGS   W   K CT+      + FFDP  SST+K
Sbjct: 17  LEEYAIPVSIGTPGQDFLLLFDTGSSDTWVPHKGCTKSEGCVGSRFFDPSASSTFK 72
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 Back     alignment and structure
>pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And Refinement At 2.0 Angstroms Resolution Of The Aspartic Proteinase From Mucor Pusillus Length = 361 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query426
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 4e-89
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 5e-81
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-79
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 2e-25
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 5e-24
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 7e-24
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-23
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 2e-23
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 3e-23
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-22
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 3e-22
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 3e-22
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 5e-22
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 5e-22
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 7e-22
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 2e-21
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 2e-21
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 4e-21
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 4e-21
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 1e-20
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 1e-20
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 7e-20
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-19
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 1e-19
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 4e-19
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 1e-18
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 2e-18
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 9e-18
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 5e-17
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 2e-16
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 2e-16
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 4e-16
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 3e-09
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 3e-09
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  275 bits (703), Expect = 4e-89
 Identities = 65/376 (17%), Positives = 115/376 (30%), Gaps = 38/376 (10%)

Query: 83  SALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLS 142
            + G +  N+   TP +++  + D   + +W  C+         APF    Q S      
Sbjct: 18  GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQ 77

Query: 143 CDSRQCTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNG------RPAALR 196
           C S  C A  R  C        S     +    G L  + + + +T G          + 
Sbjct: 78  CLS--CPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVP 135

Query: 197 NIIFGCGHNDDGT--FNENATGIVGLGGGSVSLVTQMGSS--IGGKFSYCLVPFLSSESS 252
             +F C  +         N  G+ GLG   +SL  Q+ S   +  +F+ CL  + +  S 
Sbjct: 136 QFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPT--SK 193

Query: 253 SKINFGSNGVVSG--------TGVVTTPLVAKDPDTFYFLTLESISVGKKKIH------- 297
             I FG                 +  TPL        Y + + SI + +  +        
Sbjct: 194 GAIIFGDAPNNMRQFQNQDIFHDLAFTPLT-ITLQGEYNVRVNSIRINQHSVFPLNKISS 252

Query: 298 -FDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFK 356
               ++ G  +I + T    L   +    T   +  +             LC+  +    
Sbjct: 253 TIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINA 312

Query: 357 APQITVHFS---GADVVLSPENTFIRTSDTSVCFTFKGM----EGQSIYGNLAQANFLVG 409
            P + +      G    +S E+  ++      C            +   G       LV 
Sbjct: 313 YPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVV 372

Query: 410 YDTKAKTVSFKPTDCS 425
           +D     V F  +   
Sbjct: 373 FDLARSRVGFSTSSLH 388
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query426
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.9
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.7
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 93.98
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 92.41
2hs1_A99 HIV-1 protease; ultra-high resolution active site 88.41
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 87.88
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 86.26
3liy_A116 Protease; hydrolase, hydrolase-hydrolase inhibitor 83.84
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 82.85
2hah_A116 Protease, retropepsin; retroviral, aspartyl, hydro 81.93
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
Probab=100.00  E-value=1.7e-60  Score=464.94  Aligned_cols=302  Identities=28%  Similarity=0.440  Sum_probs=256.4

Q ss_pred             cceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCC
Q 043437           78 QADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCS  157 (426)
Q Consensus        78 ~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~  157 (426)
                      .++.++.+.+|+++|+||||||+|.|+|||||+++||+|..|..|.+..++.|||++|+||+..+               
T Consensus        48 ~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~---------------  112 (370)
T 3psg_A           48 EPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS---------------  112 (370)
T ss_dssp             CTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE---------------
T ss_pred             ecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC---------------
Confidence            44556789999999999999999999999999999999999997777889999999999999987               


Q ss_pred             CCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCc---------
Q 043437          158 TEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVS---------  226 (426)
Q Consensus       158 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s---------  226 (426)
                          +.|.+.|++|+. .|.+++|+|+||+.     .++++.||++....+ .| ....+||||||++..+         
T Consensus       113 ----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~  182 (370)
T 3psg_A          113 ----QELSITYGTGSM-TGILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFD  182 (370)
T ss_dssp             ----EEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHH
T ss_pred             ----cEEEEEeCCceE-EEEEEEEEEeeCCc-----ccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHH
Confidence                899999999985 59999999999997     999999999998876 34 6778999999998765         


Q ss_pred             -hhhhcccccCCeeEEeecCCCCCCCcceEEeCC--CCccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCC
Q 043437          227 -LVTQMGSSIGGKFSYCLVPFLSSESSSKINFGS--NGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASE  303 (426)
Q Consensus       227 -l~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg--~~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~  303 (426)
                       +++| +.+.+++||+||.+...  ..|.|+|||  ..++.++ +.|+|+..   ..+|.|.+++|+|+++.+..  ...
T Consensus       183 ~l~~q-g~i~~~~FS~~L~~~~~--~~G~l~fGg~D~~~y~g~-l~~~pv~~---~~~w~v~l~~i~v~g~~~~~--~~~  253 (370)
T 3psg_A          183 NLWDQ-GLVSQDLFSVYLSSNDD--SGSVVLLGGIDSSYYTGS-LNWVPVSV---EGYWQITLDSITMDGETIAC--SGG  253 (370)
T ss_dssp             HHHHT-TCSSSSEEEEEEC-------CEEEEETCCCGGGBSSC-CEEEECSE---ETTEEEEECEEESSSSEEEC--TTC
T ss_pred             HHHHC-CCCCCCEEEEEEccCCC--CCeEEEEEeeChHhcCCc-ceeecccc---cceeEEEEeEEEECCEEEec--CCC
Confidence             3444 66789999999987532  489999999  3455555 99999987   67999999999999987764  457


Q ss_pred             CcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCCC
Q 043437          304 GNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDT  383 (426)
Q Consensus       304 ~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~~  383 (426)
                      ..+|+||||+++++|++++++|.+++.+...    ..+.+.++ |+...   .+|+|+|+|+|++++||+++|+++ .+ 
T Consensus       254 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~----~~g~~~v~-C~~~~---~lP~i~f~~~g~~~~l~~~~yi~~-~~-  323 (370)
T 3psg_A          254 CQAIVDTGTSLLTGPTSAIANIQSDIGASEN----SDGEMVIS-CSSID---SLPDIVFTIDGVQYPLSPSAYILQ-DD-  323 (370)
T ss_dssp             EEEEECTTCCSEEEEHHHHHHHHHHTTCEEC----TTCCEECC-GGGGG---GCCCEEEEETTEEEEECHHHHEEE-CS-
T ss_pred             ceEEEcCCCCcEECCHHHHHHHHHHhCCccc----CCCcEEEE-CCCcc---cCCcEEEEECCEEEEECHHHhccc-CC-
Confidence            8999999999999999999999998876532    23445454 98653   689999999999999999999998 33 


Q ss_pred             eEEEE-EEcCC------CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437          384 SVCFT-FKGME------GQSIYGNLAQANFLVGYDTKAKTVSFKPTD  423 (426)
Q Consensus       384 ~~C~~-i~~~~------~~~ilG~~fl~~~y~vfD~~~~~igfa~~~  423 (426)
                      ..|++ |.+.+      ..||||++|||++|+|||++++|||||+++
T Consensus       324 ~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~  370 (370)
T 3psg_A          324 DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             CEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence            46987 76532      359999999999999999999999999985
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 426
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 1e-48
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 7e-36
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 3e-35
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 4e-35
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-33
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-33
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 2e-33
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 2e-31
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 2e-31
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 2e-31
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 6e-31
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 4e-30
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 4e-30
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 5e-30
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-29
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-29
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 1e-28
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 2e-28
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 1e-27
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 6e-26
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 7e-25
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 7e-24
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  168 bits (425), Expect = 1e-48
 Identities = 61/380 (16%), Positives = 123/380 (32%), Gaps = 48/380 (12%)

Query: 83  SALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLS 142
            A   Y +    G        + D    L+W+ C       +          ++ Y    
Sbjct: 11  PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPG 65

Query: 143 CDSRQCTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGST---NGRPAALRNII 199
           C +  C     +    +    Y       + + G+L+       +T            ++
Sbjct: 66  CPAPSCG----SDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVL 121

Query: 200 FGCGHNDDGTF-NENATGIVGLGGGSVSLVTQMGSSIGGKFSYCLVPFLSSESSSKINFG 258
             C  +         +TG+ GL    ++L  Q+ S    K +   +  L +       FG
Sbjct: 122 AACAPSKLLASLPRGSTGVAGLANSGLALPAQVAS--AQKVANRFLLCLPTGGPGVAIFG 179

Query: 259 SNGVVSGTG---VVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASE--GNIIIDSGTT 313
              V        +  TPLV K     ++++  SI VG  ++   + +   G +++ +   
Sbjct: 180 GGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLP 239

Query: 314 LTFLPPDIVSKLTSAVSDLIKADPIS--------DPEGVLDLCYPYS------SDFKAPQ 359
              L PD+   L  A +  + A   +        +      +CY           +  P 
Sbjct: 240 YVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPN 299

Query: 360 ITVHF-SGADVVLSPENTFIRTSDTSVCFTFKGMEG---------QSIYGNLAQANFLVG 409
           + +    G+D  ++ +N+ +     + C  F  M+G           I G     +F++ 
Sbjct: 300 VQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLD 359

Query: 410 YDTKAKTVSF----KPTDCS 425
           +D + K + F      T C 
Sbjct: 360 FDMEKKRLGFSRLPHFTGCG 379
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query426
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d2nmza199 Human immunodeficiency virus type 1 protease {Huma 85.74
d3ecga199 Human immunodeficiency virus type 2 (HIV-2) protea 83.58
d4fiva_113 Feline immunodeficiency virus (FIV) protease {Feli 83.47
d2fmba_104 EIAV protease {Equine infectious anemia virus [Tax 82.84
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=4.9e-57  Score=439.83  Aligned_cols=301  Identities=29%  Similarity=0.438  Sum_probs=253.5

Q ss_pred             ceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCC
Q 043437           79 ADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCST  158 (426)
Q Consensus        79 ~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~  158 (426)
                      ++.+..|.+|+++|+||||||+|.|+|||||+++||+|..|..|.++.++.|||++|+||+..+                
T Consensus        49 ~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~----------------  112 (370)
T d3psga_          49 PLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS----------------  112 (370)
T ss_dssp             TTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE----------------
T ss_pred             ccccccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCcccccccccCCCcccccccCC----------------
Confidence            3445678999999999999999999999999999999999999988999999999999999987                


Q ss_pred             CCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCC--CCCCceeEeeCCCCCc----------
Q 043437          159 EETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTF--NENATGIVGLGGGSVS----------  226 (426)
Q Consensus       159 ~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s----------  226 (426)
                         |.|++.|++|+.. |.++.|++.+++.     .++++.||++....+.+  ....+||+|||++..+          
T Consensus       113 ---~~~~~~Yg~Gs~~-G~~~~d~~~~~~~-----~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~~~~  183 (370)
T d3psga_         113 ---QELSITYGTGSMT-GILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDN  183 (370)
T ss_dssp             ---EEEEEESSSCEEE-EEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred             ---CcEEEEeCCceEE-EEEEEEEEeeece-----eeeeeEEEEEeeccCceecccccccccccccCcccccCCCchhhh
Confidence               9999999999876 9999999999997     99999999999887643  5678999999986543          


Q ss_pred             hhhhcccccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCC
Q 043437          227 LVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEG  304 (426)
Q Consensus       227 l~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~  304 (426)
                      +..| +.+..+.|++|+.+...  .+|.|+|||.  .++.++ +.|+|+..   ..+|.|.++++.++++.+..  ....
T Consensus       184 l~~~-~~i~~~~fs~~l~~~~~--~~g~l~~Gg~d~~~~~~~-l~~~p~~~---~~~w~v~~~~i~v~g~~~~~--~~~~  254 (370)
T d3psga_         184 LWDQ-GLVSQDLFSVYLSSNDD--SGSVVLLGGIDSSYYTGS-LNWVPVSV---EGYWQITLDSITMDGETIAC--SGGC  254 (370)
T ss_dssp             HHHT-TCSSSSEEEEEEC-------CEEEEETCCCGGGBSSC-CEEEECSE---ETTEEEEECEEESSSSEEEC--TTCE
T ss_pred             hhhh-cccccceeEEEeecCCC--CCceEecCCcCchhcccc-eeEEeecc---cceEEEEEeeEEeCCeEEec--CCCc
Confidence            3445 66789999999987544  4799999993  334444 99999976   67999999999999988775  5577


Q ss_pred             cEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCCCe
Q 043437          305 NIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTS  384 (426)
Q Consensus       305 ~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~~~  384 (426)
                      .++|||||+++++|++++++|++++.+....    ++.+.+ .|+...   .+|+|+|+|+|++++|++++|+++..+  
T Consensus       255 ~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~~----~~~~~~-~C~~~~---~~P~l~f~f~g~~~~l~~~~yi~~~~~--  324 (370)
T d3psga_         255 QAIVDTGTSLLTGPTSAIANIQSDIGASENS----DGEMVI-SCSSID---SLPDIVFTIDGVQYPLSPSAYILQDDD--  324 (370)
T ss_dssp             EEEECTTCCSEEEEHHHHHHHHHHTTCEECT----TCCEEC-CGGGGG---GCCCEEEEETTEEEEECHHHHEEECSS--
T ss_pred             cEEEecCCceEeCCHHHHHHHHHHhCCeeec----CCcEEE-eccccC---CCceEEEEECCEEEEEChHHeEEEcCC--
Confidence            9999999999999999999999988765432    334434 488654   689999999999999999999987654  


Q ss_pred             EEEE-EEcC------CCcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437          385 VCFT-FKGM------EGQSIYGNLAQANFLVGYDTKAKTVSFKPTD  423 (426)
Q Consensus       385 ~C~~-i~~~------~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~  423 (426)
                      .|+. |...      ++.||||++|||++|+|||++++||||||+.
T Consensus       325 ~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a  370 (370)
T d3psga_         325 SCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             CEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             eEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEecC
Confidence            3654 5432      2579999999999999999999999999973
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]} Back     information, alignment and structure
>d3ecga1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 2 (HIV-2) protease {Human immunodeficiency virus type 2 [TaxId: 11709]} Back     information, alignment and structure
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure