Citrus Sinensis ID: 043442

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MLKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYERPLTGYVGQIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEKYHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGYKSKCPIKAYCGI
cccccEEEccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHccccHHHHHccccccccccccccccccccccEEccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccccccccccccccccccccccccccEEEEccccccEEEEcccccEEEEccccccEEEEHHHHHHHHHcccccccccEEEEcccccEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHHHccccccccccccccc
cccccEEEcccccccccHHHHHHHHHHHHHHHHHccEEEEEEccccccHHHHHHHHHHHHHHHcccHHHHHHHHHccccccEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccEEEEEcccccccccccccccccccccEEEEEccccccEEEEEEcccEEEccccccEEEEEEcccEEEEEcccEccEEEEEEEEccccEEEEEEEccccccccccHHHHccccccccccccHHHHHHHHHHHccccccccHHHHccc
mlklpvvdfsnkdlkpgtnswIKACNDVRQALEEFGCFIIEcnhnlissefRSEVFGALKnlfdlptetkmknkyerpltgyvgqipklplhesmgidnatSLEAAQSFTkimwpqgndsFCKIVHSYATLAAELDRTVSRMIFESyslekyhdSYIESITYLLRVLKnrapiggepnlgfvthtdksFTTILHQNqingleidtrdgqkinvelspssFVVVAGDALMawsndrihspshrvIMNGAVDRYSLALFSfssgivkvpdelvddehplkykpfehfgllryfrtdegykskcpikaycgi
mlklpvvdfsnkdlkpgtnswIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYERPLTGYVGQIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESyslekyhdsYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRtdegykskcpikaycgi
MLKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYERPLTGYVGQIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEKYHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGYKSKCPIKAYCGI
****************GTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYERPLTGYVGQIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEKYHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGYKSKCPIKAYC**
MLKLPVVDFSNKDLKP**NSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETK**************QIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEKYHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGYKSKCPIKAYCGI
MLKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYERPLTGYVGQIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEKYHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGYKSKCPIKAYCGI
*LKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYERPLTGYVGQIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEKYHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGY*SKCP*K**CG*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYERPLTGYVGQIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEKYHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGYKSKCPIKAYCGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query309 2.2.26 [Sep-21-2011]
Q39110377 Gibberellin 20 oxidase 1 no no 0.928 0.761 0.270 2e-17
Q39111378 Gibberellin 20 oxidase 2 no no 0.902 0.738 0.264 3e-16
Q9C971355 Gibberellin 3-beta-dioxyg no no 0.789 0.687 0.259 8e-16
P93771372 Gibberellin 20 oxidase 1 no no 0.847 0.704 0.267 1e-15
Q9SVS8349 Gibberellin 3-beta-dioxyg no no 0.870 0.770 0.261 6e-15
O04707365 Gibberellin 20 oxidase 1- N/A no 0.838 0.709 0.286 7e-15
Q39112380 Gibberellin 20 oxidase 3 no no 0.857 0.697 0.265 7e-15
O04705361 Gibberellin 20 oxidase 1- N/A no 0.915 0.783 0.274 1e-14
O04706365 Gibberellin 20 oxidase 1- N/A no 0.919 0.778 0.272 4e-14
Q9C6I4336 Gibberellin 2-beta-dioxyg no no 0.802 0.738 0.285 6e-14
>sp|Q39110|GAOX1_ARATH Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2 Back     alignment and function desciption
 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 27/314 (8%)

Query: 2   LKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKN 61
           L +P++D  N  L    +S + A   + +A ++ G F++  NH  IS E  S+       
Sbjct: 59  LDVPLIDLQN--LLSDPSSTLDASRLISEACKKHGFFLV-VNHG-ISEELISDAHEYTSR 114

Query: 62  LFDLPTETKMKN--------KYERPLTGYVGQIPKLPLHESMGI---DNATSLEAAQSFT 110
            FD+P   K +          Y    TG      KLP  E++     D+ +  ++ Q + 
Sbjct: 115 FFDMPLSEKQRVLRKSGESVGYASSFTGRFST--KLPWKETLSFRFCDDMSRSKSVQDYF 172

Query: 111 KIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEK-YHDSYIESITYLLRVLKN 169
                 G   F K+   Y    + L   +  ++  S  +++ Y   + E    ++R+  N
Sbjct: 173 CDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRL--N 230

Query: 170 RAPIGGEPNLGFVT--HTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDA 227
             P   +P+L   T  H D +  TILHQ+ +NGL++   + Q  ++  +P +FVV  GD 
Sbjct: 231 YYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFV-ENQWRSIRPNPKAFVVNIGDT 289

Query: 228 LMAWSNDRIHSPSHRVIMNGAVDRYSLALF--SFSSGIVKVPDELVDDEHPLKYKPFEHF 285
            MA SNDR  S  HR ++N   +R SLA F       +V  P EL+D     +Y  F   
Sbjct: 290 FMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSITSRRYPDFTWS 349

Query: 286 GLLRYFRTDEGYKS 299
             L +  T + Y++
Sbjct: 350 MFLEF--TQKHYRA 361
Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton. GA53 is less effectively oxidized than GA12, and GA25 is also formed as a minor product.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1 Back     alignment and function description
>sp|Q9C971|G3OX4_ARATH Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1 Back     alignment and function description
>sp|P93771|GAOX1_ORYSJ Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|Q9SVS8|G3OX3_ARATH Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1 Back     alignment and function description
>sp|O04707|GAO1A_WHEAT Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1 Back     alignment and function description
>sp|Q39112|GAOX3_ARATH Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1 Back     alignment and function description
>sp|O04705|GAO1D_WHEAT Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1 Back     alignment and function description
>sp|O04706|GAO1B_WHEAT Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1 Back     alignment and function description
>sp|Q9C6I4|G2OX7_ARATH Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
224054172313 2-oxoglutarate-dependent dioxygenase [Po 0.987 0.974 0.745 1e-140
255553011313 Gibberellin 20 oxidase, putative [Ricinu 0.990 0.977 0.716 1e-135
15219096310 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.990 0.987 0.649 1e-121
225442757317 PREDICTED: gibberellin 3-beta-dioxygenas 0.987 0.962 0.599 1e-111
147800974317 hypothetical protein VITISV_030994 [Viti 0.987 0.962 0.599 1e-111
255553295307 Gibberellin 20 oxidase, putative [Ricinu 0.970 0.977 0.602 1e-110
297743339 461 unnamed protein product [Vitis vinifera] 0.987 0.661 0.587 1e-108
225442753313 PREDICTED: gibberellin 20 oxidase 3-like 0.987 0.974 0.587 1e-108
225442749311 PREDICTED: gibberellin 20 oxidase 1 [Vit 0.987 0.980 0.557 1e-102
147852210311 hypothetical protein VITISV_028513 [Viti 0.987 0.980 0.557 1e-102
>gi|224054172|ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222845385|gb|EEE82932.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 229/307 (74%), Positives = 271/307 (88%), Gaps = 2/307 (0%)

Query: 3   KLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNL 62
           KLP++DF+ +DLKPGT+SW+KAC+DVR ALEE+GCF++E  +N +  E R +VFG LK L
Sbjct: 9   KLPILDFAKEDLKPGTSSWLKACSDVRLALEEYGCFVVE--YNRLPLELRDKVFGVLKEL 66

Query: 63  FDLPTETKMKNKYERPLTGYVGQIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFC 122
           FDLPTETKM+NKYE+PL GYVGQI KLPLHESMGIDNATSL+A Q+FT +MWP GND FC
Sbjct: 67  FDLPTETKMQNKYEKPLNGYVGQIAKLPLHESMGIDNATSLDATQNFTDLMWPNGNDRFC 126

Query: 123 KIVHSYATLAAELDRTVSRMIFESYSLEKYHDSYIESITYLLRVLKNRAPIGGEPNLGFV 182
           + V  YA LAAELDR V+RM+FESY +EKYHDSY+ES TYLLR+LKNR P   E NLGFV
Sbjct: 127 ECVLKYANLAAELDRMVTRMVFESYGVEKYHDSYVESTTYLLRLLKNRPPKVDEHNLGFV 186

Query: 183 THTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHR 242
           THTDKSFTTILHQN+INGLE+DT+DG+KINVELSPSSFVV+AGDALMAWSNDR+ SPSHR
Sbjct: 187 THTDKSFTTILHQNEINGLEVDTKDGKKINVELSPSSFVVIAGDALMAWSNDRVISPSHR 246

Query: 243 VIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGYKSKCP 302
           VIMNG +DRYSLALF+F+ GI++VP+ELVD+EHPL YKP +H GLL ++RT+EGYKSKCP
Sbjct: 247 VIMNGKIDRYSLALFAFNKGILQVPEELVDEEHPLMYKPLDHIGLLHFYRTEEGYKSKCP 306

Query: 303 IKAYCGI 309
           IKAYCG+
Sbjct: 307 IKAYCGV 313

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255553011|ref|XP_002517548.1| Gibberellin 20 oxidase, putative [Ricinus communis] gi|223543180|gb|EEF44712.1| Gibberellin 20 oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15219096|ref|NP_175688.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|12324652|gb|AAG52288.1|AC019018_25 putative oxidoreductase; 32373-31266 [Arabidopsis thaliana] gi|332194731|gb|AEE32852.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225442757|ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 [Vitis vinifera] gi|297743341|emb|CBI36208.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147800974|emb|CAN77851.1| hypothetical protein VITISV_030994 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255553295|ref|XP_002517690.1| Gibberellin 20 oxidase, putative [Ricinus communis] gi|223543322|gb|EEF44854.1| Gibberellin 20 oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297743339|emb|CBI36206.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442753|ref|XP_002284983.1| PREDICTED: gibberellin 20 oxidase 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442749|ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera] gi|297743336|emb|CBI36203.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147852210|emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
TAIR|locus:2011576310 AT1G52790 [Arabidopsis thalian 0.987 0.983 0.651 4.1e-113
TAIR|locus:2011581314 AT1G52800 [Arabidopsis thalian 0.987 0.971 0.5 2.7e-84
TAIR|locus:2011506317 AT1G52820 [Arabidopsis thalian 0.990 0.965 0.487 4.3e-77
TAIR|locus:2034255320 AT1G80320 [Arabidopsis thalian 0.983 0.95 0.461 9.6e-73
TAIR|locus:2196618320 AT1G15540 [Arabidopsis thalian 0.987 0.953 0.442 2.1e-68
TAIR|locus:2139389322 AOP1 [Arabidopsis thaliana (ta 0.964 0.925 0.421 7.1e-61
TAIR|locus:2010474322 AT1G28030 [Arabidopsis thalian 0.987 0.947 0.4 5.5e-54
TAIR|locus:2011586289 AT1G52810 [Arabidopsis thalian 0.533 0.570 0.455 1.4e-48
TAIR|locus:2139370361 AOP3 [Arabidopsis thaliana (ta 0.491 0.421 0.393 1.9e-26
TAIR|locus:2085879349 AT3G19010 [Arabidopsis thalian 0.883 0.782 0.299 1.4e-23
TAIR|locus:2011576 AT1G52790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
 Identities = 200/307 (65%), Positives = 254/307 (82%)

Query:     3 KLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNL 62
             K+P +DFS +DLKPGT  W     ++RQALEE+GCFII+        +    VFG+L +L
Sbjct:     4 KIPTLDFSREDLKPGTKYWESTRENIRQALEEYGCFIIDLKDKT-PLDLLDRVFGSLVDL 62

Query:    63 FDLPTETKMKNKYERPLTGYVGQIPKLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFC 122
             FDLPT+TKMKNKY++PL GYVGQIP LPLHES+GIDNATSLEA +SFT +MWPQGN+ F 
Sbjct:    63 FDLPTQTKMKNKYDKPLNGYVGQIPALPLHESLGIDNATSLEATRSFTGLMWPQGNEHFS 122

Query:   123 KIVHSYATLAAELDRTVSRMIFESYSLEKYHDSYIESITYLLRVLKNRAPIGGEPNLGFV 182
             + ++ YA  AAELD+ V+RM+F+SY++EKY+D YIES TYLLRVLKNRAP    P LGFV
Sbjct:   123 ECLYKYAEFAAELDQMVTRMVFQSYNVEKYYDPYIESTTYLLRVLKNRAPNNENPTLGFV 182

Query:   183 THTDKSFTTILHQNQINGLEIDTRDGQKINVELS-PSSFVVVAGDALMAWSNDRIHSPSH 241
             THTDKSFTTILHQ+Q+NGLE++TR+G++IN+ LS PS F+VVAGDALMAWSNDR+ SP H
Sbjct:   183 THTDKSFTTILHQDQVNGLEMETREGERININLSSPSLFMVVAGDALMAWSNDRVWSPRH 242

Query:   242 RVIMNGAVDRYSLALFSFSSGIVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGYKSKC 301
             +V+++G  DRYSL +F+F++G ++VP+EL+D +HPL YKPF+H GLLR++RTD GYKS+C
Sbjct:   243 QVLVSGETDRYSLGMFAFNNGTLQVPEELIDHQHPLMYKPFDHLGLLRFYRTDTGYKSEC 302

Query:   302 PIKAYCG 308
             PIKAYCG
Sbjct:   303 PIKAYCG 309
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2011581 AT1G52800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011506 AT1G52820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034255 AT1G80320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196618 AT1G15540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139389 AOP1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010474 AT1G28030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011586 AT1G52810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139370 AOP3 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085879 AT3G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 4e-37
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-27
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 8e-22
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-21
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-20
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 5e-20
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-19
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-17
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-17
PLN02704335 PLN02704, PLN02704, flavonol synthase 3e-15
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-14
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-14
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-13
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-13
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-13
PLN02485329 PLN02485, PLN02485, oxidoreductase 3e-12
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 3e-12
PLN02904357 PLN02904, PLN02904, oxidoreductase 4e-12
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 8e-12
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 4e-11
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-10
PLN02216357 PLN02216, PLN02216, protein SRG1 8e-09
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-08
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-06
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-06
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 4e-05
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 0.001
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information 
 Score =  133 bits (337), Expect = 4e-37
 Identities = 85/279 (30%), Positives = 131/279 (46%), Gaps = 36/279 (12%)

Query: 28  VRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYERPLTGYVGQIP 87
           +R+A E +GCF +  NH  +S    +E+   +++LFDLP E K +N      +GY+    
Sbjct: 21  LREACERWGCFRV-VNHG-VSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSGYMAPSE 78

Query: 88  KLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFC----------KIVHSYATLAAELDR 137
             PL+E++G+ +  S            PQ  D+FC          + +  YA    +L  
Sbjct: 79  VNPLYEALGLYDMAS------------PQAVDTFCSQLDASPHQRETIKKYAKAIHDLAM 126

Query: 138 TVSRMIFESYSLEKYHDSYIESITYLLRVLK-NRAP--IGGEPNLGFVTHTDKSFTTILH 194
            ++R + ES  L +    + +      R+ K N  P  +G   + G   HTD  F TIL 
Sbjct: 127 DLARKLAESLGLVEGD--FFQGWPSQFRINKYNFTPETVG---SSGVQIHTDSGFLTILQ 181

Query: 195 QNQ-INGLEI-DTRDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRY 252
            ++ + GLE+ D   G+ + V+  P + +V  GD   AWSN R+ +  HRV    A  R 
Sbjct: 182 DDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATMRI 241

Query: 253 SLALFSFSS--GIVKVPDELVDDEHPLKYKPFEHFGLLR 289
           S+A F        V+ P E VD EHP  YKPF +    +
Sbjct: 242 SIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRK 280

Length = 300
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 309
PLN02276361 gibberellin 20-oxidase 100.0
PLN02216357 protein SRG1 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02485329 oxidoreductase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02904357 oxidoreductase 100.0
PLN02947374 oxidoreductase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.93
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.9
PLN03176120 flavanone-3-hydroxylase; Provisional 99.79
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 97.15
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 96.07
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.02
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.75
TIGR02466201 conserved hypothetical protein. This family consis 83.24
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information 
Probab=100.00  E-value=4.3e-76  Score=548.50  Aligned_cols=289  Identities=26%  Similarity=0.383  Sum_probs=256.8

Q ss_pred             CCCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCCHHHHhhccCC-CCCc
Q 043442            2 LKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYE-RPLT   80 (309)
Q Consensus         2 ~~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~   80 (309)
                      .+||||||+.+ +.+++.+|.+++++|.+||++||||||+|||  |+.++++++++++++||+||.|+|+++... ...+
T Consensus        39 ~~iPvIDls~~-~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHG--I~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~  115 (361)
T PLN02276         39 LAVPLIDLGGF-LSGDEAATAEAARLVREACLKHGFFQVVNHG--VDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESC  115 (361)
T ss_pred             CCCCeEEChhh-cCCChHHHHHHHHHHHHHHHHCcEEEEEcCC--CCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcc
Confidence            36999999985 3323345778999999999999999999999  999999999999999999999999998654 3678


Q ss_pred             eeecCCC-----CCCccceeecCCCCCh---hHHhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-c
Q 043442           81 GYVGQIP-----KLPLHESMGIDNATSL---EAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLE-K  151 (309)
Q Consensus        81 GY~~~~~-----~~d~~E~~~~~~~~~~---~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~  151 (309)
                      ||.+...     ..|++|.|.++.....   .....+.+|.||+..++||+.+++|++.|.+++.+||++|+++||++ +
T Consensus       116 GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~  195 (361)
T PLN02276        116 GYASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAMKTLSLKIMELLGISLGVDRG  195 (361)
T ss_pred             ccCccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence            9987543     2479999998743211   11123456789987889999999999999999999999999999999 9


Q ss_pred             hhhhhhcccccceeeccccCCCCCCCCccccccccCCceeEEecCCCCceeEEcCCCCeEEecCCCCeEEEEhhHHHHHH
Q 043442          152 YHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAW  231 (309)
Q Consensus       152 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~  231 (309)
                      +|++++..+.+.||++|||+++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||+||+||+|
T Consensus       196 ~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p~pgalVVNiGD~L~~~  274 (361)
T PLN02276        196 YYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVF-VDNKWRSVRPRPGALVVNIGDTFMAL  274 (361)
T ss_pred             HHHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEE-ECCEEEEcCCCCCeEEEEcHHHHHHH
Confidence            99998888889999999999988777899999999999999999999999997 78999999999999999999999999


Q ss_pred             hCCcccCCCceeecCCCCceEEEEeccCCCc--ceeCCCccCCCCCCCCCCCccHHHHHHHHhcc
Q 043442          232 SNDRIHSPSHRVIMNGAVDRYSLALFSFSSG--IVKVPDELVDDEHPLKYKPFEHFGLLRYFRTD  294 (309)
Q Consensus       232 TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~  294 (309)
                      |||+||||+|||+.++.++||||+||++|+.  +|.|+++|+++++|++|+++|++||++.+...
T Consensus       275 TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~  339 (361)
T PLN02276        275 SNGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKH  339 (361)
T ss_pred             hCCccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHh
Confidence            9999999999999888889999999999998  99999999999999999999999999877653

>PLN02216 protein SRG1 Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 8e-07
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 8e-07
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 7e-06
1w9y_A319 The Structure Of Acc Oxidase Length = 319 2e-05
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 1e-04
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 6e-04
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 8/176 (4%)
Query: 113 MWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEKYH-DSYIESITYLLRVLK-NR 170
           +WP+    + +    YA     L   V + +     LE    +  +  +  LL  +K N 
Sbjct: 156 IWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINY 215
Query: 171 APIGGEPNL--GFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDAL 228
            P   +P L  G   HTD S  T +  N + GL++   +G+ +  +  P S V+  GD L
Sbjct: 216 YPKCPQPELALGVEAHTDVSALTFILHNMVPGLQL-FYEGKWVTAKCVPDSIVMHIGDTL 274
Query: 229 MAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSG---IVKVPDELVDDEHPLKYKP 281
              SN +  S  HR ++N    R S A+F        ++K   E+V  E P K+ P
Sbjct: 275 EILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPP 330
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 3e-41
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 3e-38
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-37
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 4e-37
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-32
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 6e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  145 bits (368), Expect = 3e-41
 Identities = 65/299 (21%), Positives = 112/299 (37%), Gaps = 29/299 (9%)

Query: 2   LKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCF-IIECNHNLISSEFRSEVFGALK 60
            ++P +D  N +             ++++A  ++G   +I  NH  I ++    V  A +
Sbjct: 45  PQVPTIDLKNIE-SDDEKIRENCIEELKKASLDWGVMHLI--NHG-IPADLMERVKKAGE 100

Query: 61  NLFDLPTETKMKNKYERPLTGYVG--------QIPKLPLHESMGIDNATSLEAAQSFTKI 112
             F L  E K K   ++      G           +L   +          +   S    
Sbjct: 101 EFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSI--- 157

Query: 113 MWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLEKYHDS----YIESITYLLRVLK 168
            WP+    + +    YA     L   V + +     LE          +E +   +++  
Sbjct: 158 -WPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKI-- 214

Query: 169 NRAPIGGEPNL--GFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGD 226
           N  P   +P L  G   HTD S  T +  N + GL++   +G+ +  +  P S V+  GD
Sbjct: 215 NYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQL-FYEGKWVTAKCVPDSIVMHIGD 273

Query: 227 ALMAWSNDRIHSPSHRVIMNGAVDRYSLALF---SFSSGIVKVPDELVDDEHPLKYKPF 282
            L   SN +  S  HR ++N    R S A+F        ++K   E+V  E P K+ P 
Sbjct: 274 TLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPR 332
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.05
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.17
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 86.59
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 83.34
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 82.71
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 82.62
3tht_A345 Alkylated DNA repair protein ALKB homolog 8; struc 80.35
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=8.2e-80  Score=563.96  Aligned_cols=291  Identities=20%  Similarity=0.254  Sum_probs=259.5

Q ss_pred             CCCCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCCHHHHhhccCC-CCC
Q 043442            1 MLKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYE-RPL   79 (309)
Q Consensus         1 m~~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~   79 (309)
                      |++||||||+.+  .   .++++++++|.+||++||||||+|||  |+.++++++++.+++||+||.|+|+++... ...
T Consensus         4 ~~~iPvIDls~~--~---~~~~~~~~~l~~A~~~~GFf~v~nHG--i~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~   76 (312)
T 3oox_A            4 TSAIDPVSFSLY--A---KDFTRFAQELGASFERYGFAVLSDYD--LDQARIDAAVDSAKAFFALPVETKKQYAGVKGGA   76 (312)
T ss_dssp             CCSSCCEETHHH--H---HCHHHHHHHHHHHHHHHSEEEEESCC--SCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGT
T ss_pred             CCCCCeEEChHh--c---ccHHHHHHHHHHHHHhCcEEEEECCC--CCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCc
Confidence            678999999974  2   24678999999999999999999999  999999999999999999999999999763 467


Q ss_pred             ceeecCCC-------CCCccceeecCCCCC--hhHHhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 043442           80 TGYVGQIP-------KLPLHESMGIDNATS--LEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLE  150 (309)
Q Consensus        80 ~GY~~~~~-------~~d~~E~~~~~~~~~--~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~  150 (309)
                      +||.+.+.       ..|++|.|.++....  ......+.+|.||+.+|+||+++++|+++|.+++.+|+++|+++||++
T Consensus        77 ~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~  156 (312)
T 3oox_A           77 RGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE  156 (312)
T ss_dssp             SEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             cccccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence            99987553       258999999875321  222234567899999999999999999999999999999999999999


Q ss_pred             -chhhhhhcccccceeeccccCCCCCCCCccccccccCCceeEEecCCCCceeEEcCCCCeEEecCCCCeEEEEhhHHHH
Q 043442          151 -KYHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALM  229 (309)
Q Consensus       151 -~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~  229 (309)
                       ++|++.+..+.+.||++||||++.++..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++||||||+||
T Consensus       157 ~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~  236 (312)
T 3oox_A          157 RDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLE  236 (312)
T ss_dssp             TTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHH
T ss_pred             HHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHH
Confidence             9999988888899999999998875445999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCcccCCCceeecCC----CCceEEEEeccCCCc--ceeCCCccCCCCCCCCCC-CccHHHHHHHHhcccccC
Q 043442          230 AWSNDRIHSPSHRVIMNG----AVDRYSLALFSFSSG--IVKVPDELVDDEHPLKYK-PFEHFGLLRYFRTDEGYK  298 (309)
Q Consensus       230 ~~TnG~~ks~~HRV~~~~----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~-~~t~~e~~~~~~~~~g~~  298 (309)
                      +||||+||||+|||++++    +.+|||++||++|+.  +|.|+++|+++++|++|+ ++|++||+..|++++|++
T Consensus       237 ~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~~l~  312 (312)
T 3oox_A          237 RLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREIKLA  312 (312)
T ss_dssp             HHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHHC--
T ss_pred             HHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHhccC
Confidence            999999999999998763    467999999999998  999999999999999999 999999999999998874
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 309
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-37
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-36
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-28
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-18
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  135 bits (339), Expect = 1e-37
 Identities = 64/292 (21%), Positives = 111/292 (38%), Gaps = 15/292 (5%)

Query: 2   LKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKN 61
            ++P +D  N +             ++++A  ++G   +   H  I ++    V  A + 
Sbjct: 44  PQVPTIDLKNIE-SDDEKIRENCIEELKKASLDWGVMHLIN-HG-IPADLMERVKKAGEE 100

Query: 62  LFDLPTETKMKNKYERPLTGYVGQIPKLPLHES---MGIDNATSLEAAQSFTKI-MWPQG 117
            F L  E K K   ++      G   KL  + S      D    L   +    + +WP+ 
Sbjct: 101 FFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT 160

Query: 118 NDSFCKIVHSYATLAAELDRTVSRMIFESYSLEK----YHDSYIESITYLLRVLKNRAPI 173
              + +    YA     L   V + +     LE          +E +   +++       
Sbjct: 161 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCP 220

Query: 174 GGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSN 233
             E  LG   HTD S  T +  N + GL++   +G+ +  +  P S V+  GD L   SN
Sbjct: 221 QPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDTLEILSN 279

Query: 234 DRIHSPSHRVIMNGAVDRYSLALF---SFSSGIVKVPDELVDDEHPLKYKPF 282
            +  S  HR ++N    R S A+F        ++K   E+V  E P K+ P 
Sbjct: 280 GKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPR 331
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 91.96
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3e-72  Score=519.72  Aligned_cols=282  Identities=22%  Similarity=0.296  Sum_probs=243.1

Q ss_pred             CCCCEEECCCCCCCCCc-hhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCCHHHHhhccCCC---
Q 043442            2 LKLPVVDFSNKDLKPGT-NSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYER---   77 (309)
Q Consensus         2 ~~iPvIDl~~~~l~~~~-~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---   77 (309)
                      .+||||||+.+  .+++ ..|++++++|.+||+++|||||+|||  |+.++++++++++++||+||.|+|+++....   
T Consensus        44 ~~IPvIDls~l--~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHG--I~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~  119 (349)
T d1gp6a_          44 PQVPTIDLKNI--ESDDEKIRENCIEELKKASLDWGVMHLINHG--IPADLMERVKKAGEEFFSLSVEEKEKYANDQATG  119 (349)
T ss_dssp             CCCCEEECTTT--TCSCHHHHHHHHHHHHHHHHHTSEEEEESCS--CCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGT
T ss_pred             CCcCeEEChhc--CCCCHHHHHHHHHHHHHHHHhCCEEEEEccC--CCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccC
Confidence            47999999985  4444 45889999999999999999999999  9999999999999999999999999997643   


Q ss_pred             CCceeecCCCC-----CCccceee-cCCCCChhHHhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-
Q 043442           78 PLTGYVGQIPK-----LPLHESMG-IDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLE-  150 (309)
Q Consensus        78 ~~~GY~~~~~~-----~d~~E~~~-~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-  150 (309)
                      ...||......     .+..+.+. ....     .....+|.||+..+.|++.+++|+++|.+++.+|+++++++||++ 
T Consensus       120 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~  194 (349)
T d1gp6a_         120 KIQGYGSKLANNASGQLEWEDYFFHLAYP-----EEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEP  194 (349)
T ss_dssp             BCSEEECCCCCSTTCCCCSCEEEEEEEES-----GGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred             Cccccccccccccccccchhhhhcccccc-----cccccccccccccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCH
Confidence            33444432211     12222211 1111     122346799999999999999999999999999999999999999 


Q ss_pred             chhhhhh---cccccceeeccccCCCCCCCCccccccccCCceeEEecCCCCceeEEcCCCCeEEecCCCCeEEEEhhHH
Q 043442          151 KYHDSYI---ESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDA  227 (309)
Q Consensus       151 ~~~~~~~---~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~  227 (309)
                      ++|.+.+   ....+.||++|||+++.+...+|+++|||+|+||||+||.++||||+ ++|+|++|+|.+|++|||+||+
T Consensus       195 ~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~-~~g~W~~V~p~~~a~vVNvGD~  273 (349)
T d1gp6a_         195 DRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDT  273 (349)
T ss_dssp             THHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECHH
T ss_pred             HHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEeccCCcceeee-cCCceEEccCCCCCeeeeHHhH
Confidence            8887765   34567899999999988888899999999999999999999999995 6899999999999999999999


Q ss_pred             HHHHhCCcccCCCceeecCCCCceEEEEeccCCCc--c-eeCCCccCCCCCCCCCCCccHHHHHHHHhc
Q 043442          228 LMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSG--I-VKVPDELVDDEHPLKYKPFEHFGLLRYFRT  293 (309)
Q Consensus       228 l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~--~-i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~  293 (309)
                      ||+||||+||||+|||+.+++++||||+||++|+.  + ++|+++|+++++|++|+|||++||++.|+.
T Consensus       274 l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         274 LEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             HHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             HHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHHHHHHh
Confidence            99999999999999999998899999999999988  4 489999999999999999999999999874
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure