Citrus Sinensis ID: 043453

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130----
Protein Sequence
MKNLKEIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGGLHIYIQDVTKCSTCYWSILESVACLRYDYEKSQPTCYGWSRN
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccccEEEEcEEccccccccccccccEEEEEEEccccccEEEEEEEEEccccEEEEEEccccccEEEEEEcccEEEEEccccccccEEEccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccEEEEEEEEccccccccEEEccccEEEEEEEccccccEEEEEEEEccccEEEEEEEccccccEEEEEEEccccEEEccccccEEEEEccccc
Coil and Loop (DISEMBL)
MKNLKEIMLLVTLLAATVRqsngglnitpkRVVMITnntsegrfdltvhckskdddvgehvpspnqsysfsfhdklfGQTLFYCSfkwnngglhiYIQDVTKCSTCYWSILESVACLRydyeksqptcygwsrn
Flexible Loop (DISEMBL)
MKNLKEIMLLVTLLAATVrqsngglnitpkrvVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGGLHIYIQDVTKCSTCYWSILESVACLrydyeksqptcygwsrn
Low Complexity Region (SEG)
MKNLKEIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGGLHIYIQDVTKCSTCYWSILESVACLRYDYEKSQPTCYGWSRN
Disordered region (IsUnstruct)
*****EIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHC*****************YSFSFHDKLFGQTLFYCSFKWNNGGLHIYIQDVTKCSTCYWSILESVACLRYDYEKSQPTCYGW***
Disordered Region (DISOPRED)
**NLKEIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGGLHIYIQDVTKCSTCYWSILESVACLRYDYEKSQPTCYGWSR*
Disordered Region (DISEMBL)
MKNLKEIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGGLHIYIQDVTKCSTCYWSILESVACLRYDYEKSQPTCYGWSRN
Disordered Region (DISPRO)
MKNLKEIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGGLHIYIQDVTKCSTCYWSILESVACLRYDYEKSQPTCYGWSR*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKNLKEIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGGLHIYIQDVTKCSTCYWSILESVACLRYDYEKSQPTCYGWSRN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
255554242	238	conserved hypothetical protein [Ricinus	0.858	0.483	0.384	4e-16
449453916	146	PREDICTED: uncharacterized protein LOC10	0.902	0.828	0.376	7e-14
164449263	212	self-incompatibility protein 2 [Cucumis	0.902	0.570	0.330	9e-14
164449262	142	self-incompatibility protein 1 [Cucumis	0.902	0.852	0.330	1e-13
449453914	146	PREDICTED: uncharacterized protein LOC10	0.902	0.828	0.376	1e-13
449453918	146	PREDICTED: uncharacterized protein LOC10	0.902	0.828	0.376	2e-13
296090061	161	unnamed protein product [Vitis vinifera]	0.977	0.813	0.338	2e-13
296090055	172	unnamed protein product [Vitis vinifera]	0.813	0.633	0.362	3e-12
255554234	126	conserved hypothetical protein [Ricinus	0.791	0.841	0.330	4e-12
357518459	231	Self-incompatibility protein [Medicago t	0.947	0.549	0.350	4e-12

>gi|255554242|ref|XP_002518161.1| conserved hypothetical protein [Ricinus communis] gi|223542757|gb|EEF44294.1| conserved hypothetical protein [Ricinus communis]

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 10/125 (8%)

Query: 18  VRQSNGGLNIT----PKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFH 73
           VR S   +N       +  V+ITN+ ++G  DL+VHCKSK+DD+G H+  P+ +Y F F 
Sbjct: 115 VRPSGPSMNEARFKLKRATVIITNDLNQG-LDLSVHCKSKEDDLGVHILPPHNNYQFEFQ 173

Query: 74  DKLFGQTLFYCSFKWNNGGLH---IYIQ--DVTKCSTCYWSILESVACLRYDYEKSQPTC 128
              +G T F+C F W   G+H   IYIQ  D  KCSTC W + +   C+  +   +   C
Sbjct: 174 PNFWGVTQFFCGFTWKKTGIHWFDIYIQNRDYPKCSTCKWVLRQKGPCMFEEKTNNYTLC 233

Query: 129 YGWSR 133
           Y W++
Sbjct: 234 YDWNK 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453916|ref|XP_004144702.1| PREDICTED: uncharacterized protein LOC101212885 [Cucumis sativus]

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 10  LVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYS 69
           L+      +  + G + I P   V+I N    G   +TVHCKSK+DD+G HV    Q YS
Sbjct: 11  LLIFFLCNLCATQGSIFIQPVTTVVIFNQIEYG-IPVTVHCKSKNDDLGVHVLPLGQGYS 69

Query: 70  FSFHDKLFGQTLFYCSFKWNNGGLHIY-------IQDVTKCSTCYWSILESVACLRYDYE 122
           F F   L G TLF+CSF W  G   IY        +D  KC+TC W I E   CL+    
Sbjct: 70  FKFRPNLVGTTLFFCSFTW-TGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKN 128

Query: 123 KSQPTCYGWS 132
             +  CY + 
Sbjct: 129 PGKEICYNYG 138

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164449263|gb|ABY56092.1| self-incompatibility protein 2 [Cucumis melo]

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)

Query: 10  LVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYS 69
           +  LL  ++  ++  +++ P+  V I N    G   L +HC+SK DD+G +V S ++SYS
Sbjct: 81  MFLLLPISLHATDELISLLPETTVTIVNEV--GGPLLGIHCRSKQDDLGVNVVSSDKSYS 138

Query: 70  FSFHDKLFGQTLFYCSFKWNNGGLHIYI-----QDVTKCSTCYWSILESVACLRYDYEKS 124
           F+F   ++G TLFYC F+W  G  H +      +D   C+ C W +  S  CL+  + ++
Sbjct: 139 FNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQ--HSET 196

Query: 125 QPTCYGWSRN 134
             TC+ W++N
Sbjct: 197 SITCFPWNKN 206

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164449262|gb|ABY56091.1| self-incompatibility protein 1 [Cucumis melo] gi|164449266|gb|ABY56095.1| self-incompatibility protein 3 [Cucumis melo] gi|164449267|gb|ABY56096.1| self-incompatibility protein 4 [Cucumis melo]

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)

Query: 10  LVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYS 69
           +  LL  ++  ++  +++ P+  V I N    G   L +HC+SK DD+G +V S ++SYS
Sbjct: 11  MFLLLPISLHATDELISLLPETTVTIVNEV--GGPLLGIHCRSKQDDLGVNVVSSDKSYS 68

Query: 70  FSFHDKLFGQTLFYCSFKWNNGGLHIYI-----QDVTKCSTCYWSILESVACLRYDYEKS 124
           F+F   ++G TLFYC F+W  G  H +      +D   C+ C W +  S  CL+  + ++
Sbjct: 69  FNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQ--HSET 126

Query: 125 QPTCYGWSRN 134
             TC+ W++N
Sbjct: 127 SITCFPWNKN 136

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453914|ref|XP_004144701.1| PREDICTED: uncharacterized protein LOC101212646 [Cucumis sativus]

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 62/130 (47%), Gaps = 9/130 (6%)

Query: 10  LVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYS 69
           L+      +    G + I P   V+I N    G   +TVHCKSK+DD+G HV    Q YS
Sbjct: 11  LLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYG-IPVTVHCKSKNDDLGVHVLPLGQGYS 69

Query: 70  FSFHDKLFGQTLFYCSFKWNNGGLHIY-------IQDVTKCSTCYWSILESVACLRYDYE 122
           F F   L G TLF+CSF W  G   IY        +D  KC+TC W I E   CL+    
Sbjct: 70  FKFRPNLVGTTLFFCSFTW-TGQHQIYWFNVFDDKRDAGKCTTCRWIIHEYSMCLQDPKN 128

Query: 123 KSQPTCYGWS 132
             +  CY + 
Sbjct: 129 PGKEICYNYG 138

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453918|ref|XP_004144703.1| PREDICTED: uncharacterized protein LOC101213120 [Cucumis sativus]

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 62/130 (47%), Gaps = 9/130 (6%)

Query: 10  LVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYS 69
           L+      +    G + I P   V+I N    G   +TVHCKSK+DD+G HV    Q YS
Sbjct: 11  LLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYG-IPVTVHCKSKNDDLGVHVLPLGQGYS 69

Query: 70  FSFHDKLFGQTLFYCSFKWNNGGLHIY-------IQDVTKCSTCYWSILESVACLRYDYE 122
           F F   L G TLF+CSF W  G   IY        +D  KC+TC W I E   CL+    
Sbjct: 70  FKFRPNLVGTTLFFCSFTW-TGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKN 128

Query: 123 KSQPTCYGWS 132
             +  CY + 
Sbjct: 129 PGKEICYNYG 138

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090061|emb|CBI39880.3| unnamed protein product [Vitis vinifera]

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 5/136 (3%)

Query: 1   MKNLKEIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEH 60
           M +L   +    LL   VR  +GG  +  K+V +   N  +   DL VHCKSK+DD+G H
Sbjct: 1   MLSLDRYLFSFVLLVFLVRLCDGGPGVVEKKVDLKIINGLDAGTDLNVHCKSKNDDLGAH 60

Query: 61  VPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGG--LHIYIQ--DVTKCS-TCYWSILESVA 115
           V + +Q + F F    +G TL++C F WN+      IY+Q  D  +C+  C+W +     
Sbjct: 61  VLAFDQFFEFRFRPNFWGTTLYFCRFWWNSESHWFDIYVQKRDAGRCNKKCWWYVGADGP 120

Query: 116 CLRYDYEKSQPTCYGW 131
           CL  D       C  W
Sbjct: 121 CLLNDKIGVYDICENW 136

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090055|emb|CBI39874.3| unnamed protein product [Vitis vinifera]

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 7/116 (6%)

Query: 8   MLLVTLLAATVRQSNGGLNITPKRV-VMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQ 66
           +    LL   VR  +GG  +  K+V + ITN+   G  DL +HC+S DDD+G HV +P+Q
Sbjct: 9   LFSFVLLVFLVRLCDGGPWVVEKKVDLRITNDLGSG-LDLNLHCQSDDDDLGTHVLAPDQ 67

Query: 67  SYSFSFHDKLFGQTLFYCSFKWNNGG--LHIYIQ--DVTKC-STCYWSILESVACL 117
            + F F    +G TL++C F W       +IY++  D ++C S C+W +     CL
Sbjct: 68  FFEFRFRPNFWGTTLYFCKFWWGGESHWFNIYVEKRDTSRCDSKCWWMVGPVGPCL 123

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554234|ref|XP_002518157.1| conserved hypothetical protein [Ricinus communis] gi|223542753|gb|EEF44290.1| conserved hypothetical protein [Ricinus communis]

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 6/112 (5%)

Query: 10  LVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYS 69
           LV LLA    +   G   +P + ++   N  +G  DLT+HCKS++DD+G  +  P  S+ 
Sbjct: 9   LVILLALLTTRGEAGF--SPSKTLVRITNEMDGGLDLTIHCKSRNDDLGAQLLHPQGSFE 66

Query: 70  FSFHDKLFGQTLFYCSFKWNNG----GLHIYIQDVTKCSTCYWSILESVACL 117
           F F    +  T +YCSF W        ++I  +D  KC+ C+W I ++  C+
Sbjct: 67  FHFRVNFWETTQYYCSFHWTGQFQWFDIYIAARDDFKCNECFWKIKQTGPCM 118

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357518459|ref|XP_003629518.1| Self-incompatibility protein [Medicago truncatula] gi|355523540|gb|AET03994.1| Self-incompatibility protein [Medicago truncatula]

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 10/137 (7%)

Query: 3   NLKEIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRF--DLTVHCKSKDDDVGEH 60
            LK  ++L+ +L+   R++   L    K  V I N+  +     ++T HCKSK+DD+G H
Sbjct: 8   TLKFSLVLIVILSFEARETIASL--FGKVSVTIINDMRQNHIPTNITFHCKSKNDDLGFH 65

Query: 61  VPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGGLHIYIQDV-----TKCSTCYWSILESVA 115
             +   SY+FSF  +LFG TLF+C F W  G LH Y  D+       C TC W I +   
Sbjct: 66  TLTFGGSYTFSFRPQLFGATLFFCRFTW-QGSLHPYYFDIFDFQRDDCKTCKWKISKFGG 124

Query: 116 CLRYDYEKSQPTCYGWS 132
           C       S   C  W+
Sbjct: 125 CKYRTETMSFDVCLPWN 141

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
TAIR|locus:504955438	161	AT4G16195 "AT4G16195" [Arabido	0.791	0.658	0.396	7.7e-16
TAIR|locus:2176982	150	AT5G12060 "AT5G12060" [Arabido	0.940	0.84	0.323	1.3e-15
TAIR|locus:2176987	152	AT5G12070 "AT5G12070" [Arabido	0.947	0.835	0.335	1.6e-13
TAIR|locus:2086077	134	AT3G17080 "AT3G17080" [Arabido	0.731	0.731	0.364	1.2e-12
TAIR|locus:505006099	128	AT1G04645 "AT1G04645" [Arabido	0.723	0.757	0.361	1.9e-12
TAIR|locus:2051567	135	AT2G06090 "AT2G06090" [Arabido	0.604	0.6	0.390	2.4e-12
TAIR|locus:2086107	140	AT3G16970 "AT3G16970" [Arabido	0.761	0.728	0.336	1.3e-11
TAIR|locus:4010713833	166	AT3G55252 [Arabidopsis thalian	0.798	0.644	0.336	2.2e-11
TAIR|locus:4515103266	137	AT3G54925 "AT3G54925" [Arabido	0.589	0.576	0.392	3.2e-10
TAIR|locus:505006148	151	AT1G26795 "AT1G26795" [Arabido	0.910	0.807	0.313	1.1e-09

TAIR|locus:504955438 AT4G16195 "AT4G16195" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 46/116 (39%), Positives = 60/116 (51%)

Query:    28 TPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFK 87
             T KR V I NN    +  L  HCKSKDDD+G     P +S+SFSF  + FG+TL++CSF 
Sbjct:    45 TSKRTVEI-NNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query:    88 WNNGG--LHIYI--QDV---TKCST--CYWSILESVACLRYDYEKSQPTCYGWSRN 134
             W N      IY   +D     KC +  C W I  +  C   D  K    CY W+++
Sbjct:   104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNKS 159

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2176982 AT5G12060 "AT5G12060" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 44/136 (32%), Positives = 69/136 (50%)

Query:     7 IMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQ 66
             I LL+ +  + V+ ++  +N +  ++V ITN   +G   L +HCKS DDD+G  + +PN 
Sbjct:    14 IYLLIKIAFSQVK-TDFDVNWSTSKMVRITNRLGDG-LTLNLHCKSADDDLGLKILAPNG 71

Query:    67 SYSFSFHDKLFGQTLFYCSFKW--NNGGLHIY------IQDVTKCSTCYWSILESVACLR 118
             S+SF F   + G TLFYC F W   +    IY      ++    C  C W I     C+ 
Sbjct:    72 SWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMF 131

Query:   119 YDYEKSQPTCYGWSRN 134
              + + +   CY W+ N
Sbjct:   132 SESDHAFNICYDWNGN 147

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2176987 AT5G12070 "AT5G12070" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 46/137 (33%), Positives = 66/137 (48%)

Query:     7 IMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQ 66
             I LL+ +  + V+  +     T K VV ITN   +G   L +HCKS DDD+G  + +PN 
Sbjct:    14 IYLLIQIAFSQVKPGSDLKWSTLKSVVTITNRLGDGS-TLKLHCKSADDDLGLKILAPNG 72

Query:    67 SYSFSFHDKLF-GQTLFYCSFKW--NNGGLHIYIQDVT------KCSTCYWSILESVACL 117
             S+SF F   +  G TLF+C F W   +   +IY  D         C  C W I +   C 
Sbjct:    73 SWSFKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCR 132

Query:   118 RYDYEKSQPTCYGWSRN 134
               + + +   CY W+ N
Sbjct:   133 FSEIDDAFNICYDWNGN 149

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2086077 AT3G17080 "AT3G17080" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 39/107 (36%), Positives = 51/107 (47%)

Query:    33 VMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGG 92
             V+I N+   G   L  HCKS++DD+G    +P +S+SF F   +FG+TLFYC F W    
Sbjct:    28 VVIYNDLGGG-LPLRHHCKSREDDLGYQSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAES 86

Query:    93 --LHIYIQDVTK------CSTCYWSILESVACLRYDYEKSQPTCYGW 131
                 IY Q   K      C  C W I ++  C  Y        CY W
Sbjct:    87 HIFDIYKQSRDKEFQEFGCKKCEWKIRKNGPCKFYKKTGMFDHCYSW 133

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006099 AT1G04645 "AT1G04645" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 38/105 (36%), Positives = 52/105 (49%)

Query:    31 RVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNN 90
             R  ++T     G   LT+HCKSK DD+G HV    Q Y F F   L+  TLF+CSF+W++
Sbjct:    27 RATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDS 86

Query:    91 GGLHIYIQDVTK----CSTCYWSILESVACLRYDYEKSQPTCYGW 131
                   I D  +    C  C W I     C R   +K++  C+ W
Sbjct:    87 QFKSFDIYDAQRDQGICDDCQWEIKPDGPC-RLG-KKAK--CFPW 127

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2051567 AT2G06090 "AT2G06090" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 32/82 (39%), Positives = 50/82 (60%)

Query:     4 LKEIMLLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPS 63
             +  + +L+ ++A +V  SN G  + PK  +   N+ S     LTVHCKSKDDD+G H  +
Sbjct:     1 MNNLFVLLIIIALSVG-SNNGSKLWPKNQLHFRNSFSRNYDVLTVHCKSKDDDLGIHTVA 59

Query:    64 PNQSYSFSFHDKLFGQTLFYCS 85
              +  Y+F F D +FG+T F+C+
Sbjct:    60 RSYEYNFKFEDSVFGRTEFFCT 81

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0010048 "vernalization response" evidence=RCA

TAIR|locus:2086107 AT3G16970 "AT3G16970" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 38/113 (33%), Positives = 53/113 (46%)

Query:    29 PKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKW 88
             P+  V+I N+   G   L  HCKSK+DD+G+   + N ++SF F   +FG TLF+C F W
Sbjct:    26 PRTTVVIYNDLG-GHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW 84

Query:    89 NNGGLH---IYIQDVTK------CSTCYWSILESVACLRYDYEKSQPTCYGWS 132
             +   LH   IY Q   +      C  C W I +   C           C  W+
Sbjct:    85 DKE-LHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCLPWN 136

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4010713833 AT3G55252 [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 42/125 (33%), Positives = 62/125 (49%)

Query:    22 NGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVG-EHVPSPNQSYSFSFHDKLFGQT 80
             +G L ++ K VV+   N  + R  L VHC+S +DD G +H+P  N ++ F F+   F  T
Sbjct:    41 DGLLPLSEKHVVI--RNKLKNREILNVHCRSSEDDFGLKHIPW-NGAWGFRFYVNFFKTT 97

Query:    81 LFYCSFKWNNGGLH-IYIQDVTK----------CSTCYWSI-LESVACL-RYDYEK-SQP 126
              F C F W+NGG H  YI   ++          C  C W +  + V  + R   EK + P
Sbjct:    98 KFRCHFTWHNGGSHYFYIFKASRDDSPVGELPICKECIWEVGQDDVTPICRISREKKNNP 157

Query:   127 TCYGW 131
              C+ W
Sbjct:   158 YCFEW 162

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:4515103266 AT3G54925 "AT3G54925" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 33/84 (39%), Positives = 48/84 (57%)

Query:    21 SNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGE-HVPSPNQSYSFSFHDKLFGQ 79
             ++G L +  K VV+  +N  + +  L VHC+S +DD G  H+P  N ++ FSFH   +  
Sbjct:    40 TDGFLPLAKKHVVI--HNKVKNKEILNVHCRSSEDDFGMVHIPW-NSTWDFSFHVNFWKT 96

Query:    80 TLFYCSFKWNNGGLH-IYIQDVTK 102
             T F C F W+NGG H  YI   T+
Sbjct:    97 TKFRCHFTWHNGGSHYFYILKYTE 120

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006148 AT1G26795 "AT1G26795" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 42/134 (31%), Positives = 58/134 (43%)

Query:     9 LLVTLLAATVRQSNGGLNITPKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSY 68
             +L T  + T   S  GL    ++ V+I N     R  L VHC +K +D+G    +P   +
Sbjct:    19 ILKTSASLTNHSSPDGLLPFARKHVIIINKLVT-RATLIVHCTNKGEDLGVIRLNPLDRF 77

Query:    69 SFSFHDKLFGQTLFYCSFKW--NNGGLHIYIQDVTK--------CSTCYWSILESVACLR 118
              F F   L   T + CSF+W  N     I+  D           CS C WSI E   C R
Sbjct:    78 DFRFRVNLRKTTTYTCSFEWPGNTATFDIFRADRDDNPSGKYGVCSECIWSIYEPAPC-R 136

Query:   119 YDYEKSQPTCYGWS 132
                +  QP C+ W+
Sbjct:   137 DRRDGGQPQCFPWA 150

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	134
pfam05938	108	pfam05938, Self-incomp_S1, Plant self-incompatibil	4e-26

>gnl|CDD|218817 pfam05938, Self-incomp_S1, Plant self-incompatibility protein S1

 Score = 93.9 bits (234), Expect = 4e-26
 Identities = 43/106 (40%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 33  VMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNNGG 92
           V+I N    G+  L +HCKSKDDD+G H   P QS+ FSF D  +G TLFYC+F+W NG 
Sbjct: 3   VVIKNELGNGK-SLNIHCKSKDDDLGVHRLKPGQSFGFSFRDNFWGTTLFYCTFRWPNGK 61

Query: 93  LHIYIQ-------DVTKCSTCYWSILESVACLRYDYEKSQPTCYGW 131
            H           D     TC WS  E     R         CY W
Sbjct: 62  YHQSFDAYRAKRDDNRCGETCIWSAREDGIYFRRRKYGPDQLCYDW 107

This family consists of a series of plant proteins which are related to the Papaver rhoeas S1 self-incompatibility protein. Self incompatibility (SI) is the single most important outbreeding device found in angiosperms and is a mechanism that regulates the acceptance or rejection of pollen. S1 is known to exhibit specific pollen-inhibitory properties. Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	134
PF05938	110	Self-incomp_S1: Plant self-incompatibility protein	100.0
TIGR02376	311	Cu_nitrite_red nitrite reductase, copper-containin	88.26
PF07732	117	Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01	83.86

>PF05938 Self-incomp_S1: Plant self-incompatibility protein S1; InterPro: IPR010264 This family consists of a series of plant proteins which are related to the Papaver rhoeas S1 self-incompatibility protein

Probab=100.00  E-value=4.3e-37  Score=214.60  Aligned_cols=101  Identities=47%  Similarity=0.874  Sum_probs=93.8

Q ss_pred             eEEEEEeCCCCCCeeEEEeceeCCCCCcceecCCCCeEEEEEecCCCCceeEEEEeEeCC----eEEEEEEeCCC--C--
Q 043453           31 RVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFKWNN----GGLHIYIQDVT--K--  102 (134)
Q Consensus        31 ~~V~I~N~l~~~~~~L~vhC~Skd~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~w~~----~~f~~y~~~rd--~--  102 (134)
                      ++|+|+|+| +++..|.|||+|+|+|||.|.|+||++|+|+|+++++++|+|+|+|+|.+    +.|+||+++++  +  
T Consensus         1 ~~V~I~N~L-~~~~~L~vhC~S~d~Dlg~~~l~~g~~~~~~F~~~~~~~t~f~C~~~~~~~~~~~~f~vy~~~~~~~~c~   79 (110)
T PF05938_consen    1 NHVVIINNL-GPGKILTVHCKSKDDDLGWHVLKPGQSYSFSFRDNFFGTTLFWCHFRWPGGKYHHSFDVYRSSRDSRRCR   79 (110)
T ss_pred             CEEEEEECC-CCCCeEEEEeeCCCccCCCEECCCCCEEEEEEecCcCCceeEEEEEEECCccEEEEEEEEeccccccCCC
Confidence            379999999 66889999999999999999999999999999999999999999999954    69999999988  4  


Q ss_pred             CC-ceEEEEecCeeEEecccCCCCCeEecCC
Q 043453          103 CS-TCYWSILESVACLRYDYEKSQPTCYGWS  132 (134)
Q Consensus       103 C~-~c~W~~~~dGiy~~~~~~~~~~~~~~W~  132 (134)
                      |+ .|.|+||+||||+.+++.+++++||+|+
T Consensus        80 c~~~c~W~ir~dGiy~~~~~~~~~~~~y~W~  110 (110)
T PF05938_consen   80 CGQTCNWSIREDGIYFSNNKNKPWKKCYPWN  110 (110)
T ss_pred             CCcEEEEEEECCEeEEEcCCCccCcEEeCCC
Confidence            56 6999999999999999877779999996

Self-incompatibility (SI) is the single most important outbreeding device found in angiosperms and is a mechanism that regulates the acceptance or rejection of pollen. S1 is known to exhibit specific pollen-inhibitory properties [].

>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing

Probab=88.26  E-value=1.7  Score=35.34  Aligned_cols=56  Identities=11%  Similarity=0.200  Sum_probs=40.5

Q ss_pred             eEEEEEeCCCC-CCeeEEEeceeCCCC-CcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453           31 RVVMITNNTSE-GRFDLTVHCKSKDDD-VGEHVPSPNQSYSFSFHDKLFGQTLFYCSF   86 (134)
Q Consensus        31 ~~V~I~N~l~~-~~~~L~vhC~Skd~D-lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f   86 (134)
                      ..|+++|.++. ..+.+.+|-....++ -+...++||+++.++|...--|+-.|.|+.
T Consensus        69 v~v~v~N~~~~~~~h~~h~H~~~~~dg~~~~~~I~PG~t~ty~F~~~~~Gty~YH~H~  126 (311)
T TIGR02376        69 VELTLINPPTNTMPHNVDFHAATGALGGAALTQVNPGETATLRFKATRPGAFVYHCAP  126 (311)
T ss_pred             EEEEEEeCCCCCCceeeeecCCCccCCCCcceeECCCCeEEEEEEcCCCEEEEEEcCC
Confidence            35889999831 246788886543333 234568999999999998767888888994

This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification.

>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties

Probab=83.86  E-value=3.5  Score=28.67  Aligned_cols=55  Identities=16%  Similarity=0.274  Sum_probs=38.4

Q ss_pred             eEEEEEeCCCCCCeeEEEeceeCCC--------CCcceecCCCCeEEEEEecCC-CCceeEEEEe
Q 043453           31 RVVMITNNTSEGRFDLTVHCKSKDD--------DVGEHVPSPNQSYSFSFHDKL-FGQTLFYCSF   86 (134)
Q Consensus        31 ~~V~I~N~l~~~~~~L~vhC~Skd~--------DlG~~~L~~g~~~~f~F~~~~-~~~T~f~C~f   86 (134)
                      ..|+++|.| .....|..|=-.-..        ......+.||+++.++|..+- .|+=.|.|+.
T Consensus        36 v~i~~~N~l-~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~   99 (117)
T PF07732_consen   36 VRITVTNNL-DEPTSIHWHGLHQPPSPWMDGVPGVTQCPIAPGESFTYEFTANQQAGTYWYHSHV   99 (117)
T ss_dssp             EEEEEEEES-SSGBSEEEETSBSTTGGGGSGGTTTSGSSBSTTEEEEEEEEESSCSEEEEEEECS
T ss_pred             eEEEEEecc-ccccccccceeeeeeeeecCCcccccceeEEeecceeeeEeeeccccceeEeeCC
Confidence            469999999 556788888644222        122356899999999999875 5555555654

Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	134
d1oe2a1	159	Nitrite reductase, NIR {Alcaligenes xylosoxidans [	84.17
d1aoza1	129	Ascorbate oxidase {Zucchini (Cucurbita pepo var. m	83.33

>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Alcaligenes xylosoxidans [TaxId: 85698]

Probab=84.17  E-value=0.44  Score=32.25  Aligned_cols=57  Identities=11%  Similarity=0.190  Sum_probs=38.6

Q ss_pred             ceEEEEEeCCCC-CCeeEEEeceeCC-CCCcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453           30 KRVVMITNNTSE-GRFDLTVHCKSKD-DDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSF   86 (134)
Q Consensus        30 k~~V~I~N~l~~-~~~~L~vhC~Skd-~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f   86 (134)
                      +..|+++|.++. -...+.+|-.... ++-....++||+++.+.|...--|+-.|.|+.
T Consensus        74 ~v~v~~~N~~~~~h~h~ih~hg~~~~~~g~~~~~I~PG~t~ty~f~a~~~Gt~~yH~H~  132 (159)
T d1oe2a1          74 YVQLTLVNPATNAMPHNVEFHGATGALGGAKLTNVNPGEQATLRFKADRSGTFVYHCAP  132 (159)
T ss_dssp             EEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCC
T ss_pred             EEEEEEECCCccccccceeeccccCCCCCcccccCCCCCeEEEEEEcCCCceEEEEeCC
Confidence            346899999842 1244666664422 23344568999999999987656777888974

>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=83.33  E-value=2.1  Score=27.37  Aligned_cols=57  Identities=16%  Similarity=0.206  Sum_probs=35.3

Q ss_pred             eEEEEEeCCCCCCeeEEEecee------CCCCCc--ceecCCCCeEEEEEecCCCCceeEEEEeE
Q 043453           31 RVVMITNNTSEGRFDLTVHCKS------KDDDVG--EHVPSPNQSYSFSFHDKLFGQTLFYCSFK   87 (134)
Q Consensus        31 ~~V~I~N~l~~~~~~L~vhC~S------kd~DlG--~~~L~~g~~~~f~F~~~~~~~T~f~C~f~   87 (134)
                      ..|++.|.|+.....+..|=-.      .|..-+  ...++||+++.+.|..+--|+=.|.|+..
T Consensus        44 v~i~l~N~l~~~~~~iH~Hg~~~~~~~~~~~~~~~~~~~I~PG~s~~y~f~a~~~Gt~~YH~H~~  108 (129)
T d1aoza1          44 VVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLG  108 (129)
T ss_dssp             EEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECST
T ss_pred             EEEEEEeCCCCCCeeeeeccceeeccCccccccccccceECCCCEEEEEEECCCCCceEEecCCH
Confidence            3588999994334445555311      122122  22479999999999876556656778764