Citrus Sinensis ID: 043488
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 409 | 2.2.26 [Sep-21-2011] | |||||||
| Q95M17 | 472 | Acidic mammalian chitinas | yes | no | 0.848 | 0.735 | 0.299 | 3e-38 | |
| Q13231 | 466 | Chitotriosidase-1 OS=Homo | yes | no | 0.777 | 0.682 | 0.315 | 7e-36 | |
| Q6RY07 | 473 | Acidic mammalian chitinas | no | no | 0.762 | 0.659 | 0.301 | 2e-35 | |
| Q9WTV1 | 381 | Chitinase-3-like protein | no | no | 0.750 | 0.805 | 0.308 | 2e-35 | |
| Q5RBP6 | 410 | Chitinase-3-like protein | no | no | 0.750 | 0.748 | 0.305 | 4e-35 | |
| Q91XA9 | 473 | Acidic mammalian chitinas | yes | no | 0.762 | 0.659 | 0.298 | 7e-35 | |
| P36222 | 383 | Chitinase-3-like protein | no | no | 0.750 | 0.801 | 0.299 | 1e-34 | |
| Q9BZP6 | 476 | Acidic mammalian chitinas | no | no | 0.848 | 0.728 | 0.275 | 3e-34 | |
| Q9D7Q1 | 464 | Chitotriosidase-1 OS=Mus | no | no | 0.750 | 0.661 | 0.307 | 4e-34 | |
| Q29411 | 383 | Chitinase-3-like protein | no | no | 0.750 | 0.801 | 0.283 | 2e-31 |
| >sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 | Back alignment and function desciption |
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Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 186/374 (49%), Gaps = 27/374 (7%)
Query: 3 SKIIILVLYIFIFSESLPARAQTLIR----AGYWDSDDGFPVSDVNSALFTHLMCGFADV 58
+K+I L F+ + L + Q + A Y F +++ L THL+ FA +
Sbjct: 2 AKLIFLTGLAFLLNAQLGSAYQLVCYFSNWAQYRPGLGSFKPDNIDPCLCTHLIYAFAGM 61
Query: 59 NSTSYELSLSPSDEKQFSNFTDTVKIKNPSITTLLSIGGGNNPNYSSYSSMAGNPSFRKY 118
S S ++ +D +S+F D +K KN + LL+IGG N + +++M P RK
Sbjct: 62 -SNSEITTIEWNDVALYSSFND-LKKKNSQLKILLAIGGWNF-GTAPFTAMVATPENRKT 118
Query: 119 FIDSSIKIARLYGFQGLDLSWN----QANTSRDKYNIGILFKEWRAAVALEARNNSSQSQ 174
FI S IK YGF GLD W + + S+DK+ +L +E R A EA+ +++ +
Sbjct: 119 FISSVIKFLHQYGFDGLDFDWEYPGFRGSPSQDKHLFTVLVQETREAFEQEAKQ-TNKPR 177
Query: 175 LILTAKVAYSPLSTAAAYPVDSIRQYLNWVHVITTEYSSPTWQNFTGAHAALYD------ 228
L++TA VA + A Y + + QYL+++HV+T ++ +W+ +TG ++ LY
Sbjct: 178 LLVTAAVAAGISNIQAGYEIPQLSQYLDFIHVMTYDFHG-SWEGYTGENSPLYKYPTDTG 236
Query: 229 PNSVSNTEYGITEWIEEGLSADKLVLCLPFYGYAWTLVKPEDNGIGAAAT-----GPALH 283
N+ N EY + W + G A+KL++ P YG+ + L +NGIGA + GP
Sbjct: 237 SNTYLNVEYAMNYWKKNGAPAEKLIIGFPAYGHNFILRDASNNGIGAPTSGAGPAGPYTR 296
Query: 284 DDGLVTYKEVKNHIKNYGPNVQVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVAYAKEKK 343
+ G Y E+ +K+ ++ + V Y G W G+D+V + R+K + KE
Sbjct: 297 EAGFWAYYEICAFLKD---GATEAWDDSQNVPYAYKGTEWVGYDNVNSFRIKAQWLKENN 353
Query: 344 LRGYYVWEVSSDHY 357
G VW + D +
Sbjct: 354 FGGAMVWAIDLDDF 367
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Degrades chitin and chitotriose. May participate in the defense against nematodes, fungi and other pathogens. Plays a role in T-helper cell type 2 (Th2) immune response. Contributes to the response to IL-13 and inflammation in response to IL-13. Stimulates chemokine production by pulmonary epithelial cells. Protects lung epithelial cells against apoptosis and promotes phosphorylation of AKT1. Its function in the inflammatory response and in protecting cells against apoptosis is inhibited by allosamidin, suggesting that the function of this protein depends on carbohydrate binding. Bos taurus (taxid: 9913) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4 |
| >sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9WTV1|CH3L1_RAT Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 | Back alignment and function description |
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| >sp|P36222|CH3L1_HUMAN Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9BZP6|CHIA_HUMAN Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9D7Q1|CHIT1_MOUSE Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q29411|CH3L1_PIG Chitinase-3-like protein 1 OS=Sus scrofa GN=CHI3L1 PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 409 | ||||||
| 356558668 | 909 | PREDICTED: uncharacterized protein LOC10 | 0.963 | 0.433 | 0.571 | 1e-120 | |
| 224142425 | 763 | predicted protein [Populus trichocarpa] | 0.965 | 0.517 | 0.56 | 1e-114 | |
| 359497026 | 738 | PREDICTED: G-type lectin S-receptor-like | 0.982 | 0.544 | 0.529 | 1e-108 | |
| 359484771 | 781 | PREDICTED: G-type lectin S-receptor-like | 0.936 | 0.490 | 0.496 | 1e-102 | |
| 359497679 | 359 | PREDICTED: chitotriosidase-1-like [Vitis | 0.875 | 0.997 | 0.560 | 1e-102 | |
| 224142429 | 375 | predicted protein [Populus trichocarpa] | 0.872 | 0.952 | 0.509 | 5e-94 | |
| 296088199 | 1130 | unnamed protein product [Vitis vinifera] | 0.882 | 0.319 | 0.488 | 1e-91 | |
| 255565055 | 721 | conserved hypothetical protein [Ricinus | 0.853 | 0.484 | 0.498 | 7e-91 | |
| 255565049 | 371 | chitinase, putative [Ricinus communis] g | 0.885 | 0.975 | 0.447 | 2e-82 | |
| 225469348 | 367 | PREDICTED: chitotriosidase-1 [Vitis vini | 0.828 | 0.923 | 0.473 | 4e-81 |
| >gi|356558668|ref|XP_003547625.1| PREDICTED: uncharacterized protein LOC100787480 [Glycine max] | Back alignment and taxonomy information |
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Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/401 (57%), Positives = 288/401 (71%), Gaps = 7/401 (1%)
Query: 1 MASKIII-LVLYIFIFSESL-PARAQTLIRAGYWDSDDGFPVSDVNSALFTHLMCGFADV 58
M S+I I LVL+ F+ + P +AQT ++AGYW S GFPVSD+NSAL+THL+C FA++
Sbjct: 1 MVSRITIALVLFEFLLCQEFEPLKAQTWLQAGYWYSGSGFPVSDINSALYTHLICAFAEL 60
Query: 59 NSTSYELSLSPSDEKQFSNFTDTVKIKNPSITTLLSIGGGNNPNYSSYSSMAGNPSFRKY 118
NS++YEL +SP DE+ FS+FT TVK KNPSITTLLSI GGN N + S M S RKY
Sbjct: 61 NSSTYELYVSPEDEQSFSSFTTTVKQKNPSITTLLSIAGGNG-NDTVLSLMVSKDSSRKY 119
Query: 119 FIDSSIKIARLYGFQGLDLSWNQANTSRDKYNIGILFKEWRAAVALEARNNSSQSQLILT 178
FI SSI+IARLYGFQGLDLSW T D N+G LF+EWRAA EA N+S+Q LILT
Sbjct: 120 FIQSSIRIARLYGFQGLDLSW-VPETISDMNNMGRLFEEWRAAAKSEAANDSTQV-LILT 177
Query: 179 AKVAYSPLSTAAAYPVDSIRQYLNWVHVITTEYSSPTWQNFTGAHAALYDPNSVSNTEYG 238
A V + P +A+YPV+SI+ LNWVH++T +Y P NFT AHAALYDP+S NT+ G
Sbjct: 178 AAVHFRPGLDSASYPVESIQNNLNWVHILTYDYHMPQLANFTAAHAALYDPSSSVNTDNG 237
Query: 239 ITEWIEEGLSADKLVLCLPFYGYAWTLVKPEDNGIGAAATGPALHDDGLVTYKEVKNHIK 298
I EWI G++A KLVL LPFYGYAW L PEDN IGA+ATGPA+ G + YK++K +I+
Sbjct: 238 IKEWIGSGVTASKLVLGLPFYGYAWNLRNPEDNAIGASATGPAIGKSGAMNYKDIKAYIQ 297
Query: 299 NYGPNVQVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVAYAKEKKLRGYYVWEVSSDHYW 358
YG +V+ YN+TYVVNY S G W G+DDVE V++KV+YA+E KL GY VW+V D W
Sbjct: 298 RYGGHVK--YNATYVVNYFSNGSTWIGYDDVEVVKMKVSYARENKLLGYAVWQVPYDDNW 355
Query: 359 MLSQAAAEEDKRNRQNKRLLWAIVLPITTACILLIGFLLYY 399
+LS AAAE +N +N L I+L IT ++L+G L+YY
Sbjct: 356 VLSSAAAEHVDQNGRNSWRLLVIILIITAMSVILLGILIYY 396
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142425|ref|XP_002324558.1| predicted protein [Populus trichocarpa] gi|222865992|gb|EEF03123.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359497026|ref|XP_003635401.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359484771|ref|XP_003633158.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359497679|ref|XP_003635605.1| PREDICTED: chitotriosidase-1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224142429|ref|XP_002324560.1| predicted protein [Populus trichocarpa] gi|222865994|gb|EEF03125.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|296088199|emb|CBI35714.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255565055|ref|XP_002523520.1| conserved hypothetical protein [Ricinus communis] gi|223537227|gb|EEF38859.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|255565049|ref|XP_002523517.1| chitinase, putative [Ricinus communis] gi|223537224|gb|EEF38856.1| chitinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225469348|ref|XP_002270579.1| PREDICTED: chitotriosidase-1 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 409 | ||||||
| TAIR|locus:2134025 | 379 | ChiC "class V chitinase" [Arab | 0.882 | 0.952 | 0.401 | 2.8e-73 | |
| TAIR|locus:2134015 | 398 | AT4G19800 [Arabidopsis thalian | 0.821 | 0.844 | 0.391 | 8.2e-67 | |
| TAIR|locus:2134030 | 366 | AT4G19820 [Arabidopsis thalian | 0.875 | 0.978 | 0.361 | 8.5e-65 | |
| TAIR|locus:2133940 | 362 | AT4G19750 [Arabidopsis thalian | 0.831 | 0.939 | 0.387 | 4.2e-63 | |
| TAIR|locus:2133955 | 369 | AT4G19760 [Arabidopsis thalian | 0.831 | 0.921 | 0.385 | 1.6e-61 | |
| TAIR|locus:2134010 | 363 | AT4G19720 [Arabidopsis thalian | 0.804 | 0.906 | 0.367 | 3.8e-53 | |
| TAIR|locus:2134020 | 332 | AT4G19730 [Arabidopsis thalian | 0.748 | 0.921 | 0.371 | 2.5e-49 | |
| TAIR|locus:2133970 | 261 | AT4G19770 [Arabidopsis thalian | 0.621 | 0.973 | 0.392 | 3.4e-45 | |
| UNIPROTKB|F1MH27 | 472 | CHIA "Acidic mammalian chitina | 0.848 | 0.735 | 0.288 | 3.9e-37 | |
| UNIPROTKB|Q95M17 | 472 | CHIA "Acidic mammalian chitina | 0.848 | 0.735 | 0.288 | 6.3e-37 |
| TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 147/366 (40%), Positives = 222/366 (60%)
Query: 2 ASKIIILVLYIFIFSESLPARAQTLIRAGYWDSDDGFPVSDVNSALFTHLMCGFADVNST 61
++K+I L++ I F + AQT+++A YW FPV+D++S+LFTHL C FAD+NS
Sbjct: 3 STKLISLIVSITFFLTLQCSMAQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQ 62
Query: 62 SYELSLSPSDEKQFSNFTDTVKIKNPSITTLLXXXXXXXXXXXXXXXMAGNPSFRKYFID 121
+ ++++S +++ +FS FT TV+ +NPS+ TLL MA NP+ RK FID
Sbjct: 63 TNQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTAYAS-MASNPTSRKSFID 121
Query: 122 SSIKIARLYGFQGLDLSWNQANTSRDKYNIGILFKEWRAAVALEARNNSSQSQLILTAKV 181
SSI++AR YGF GLDL W +++ + N G L +EWR+AV EA ++S + +L+L A V
Sbjct: 122 SSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEA-SSSGKPRLLLAAAV 180
Query: 182 AYSPLSTAAAYPVDSIRQYLNWVHVITTEYSSPTWQNFTGAHAALYDP-NSVSNTEYGIT 240
YS + YPV ++ L+WV+++ ++ P W TG AAL+DP N+ + + G
Sbjct: 181 FYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTR 240
Query: 241 EWIEEGLSADKLVLCLPFYGYAWTLVKPEDNGIGAAATGPALHDDGLVTYKEVKNHIKNY 300
WI+ GL A K VL P+YGYAW L + A TG A+ DG + Y +++ I +
Sbjct: 241 SWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDN 300
Query: 301 GPNVQVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVAYAKEKKLRGYYVWEVSSDHYWML 360
G +YNST V +YC G W G+DD +++ KV YAK++ L GY+ W V +D L
Sbjct: 301 GATT--VYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGL 358
Query: 361 SQAAAE 366
S+AA++
Sbjct: 359 SRAASQ 364
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| TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MH27 CHIA "Acidic mammalian chitinase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q95M17 CHIA "Acidic mammalian chitinase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1.14 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00005604001 | SubName- Full=Chromosome undetermined scaffold_155, whole genome shotgun sequence; (359 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 409 | |||
| cd02879 | 299 | cd02879, GH18_plant_chitinase_class_V, The class V | 1e-116 | |
| smart00636 | 334 | smart00636, Glyco_18, Glyco_18 domain | 2e-77 | |
| pfam00704 | 325 | pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam | 4e-72 | |
| cd02872 | 362 | cd02872, GH18_chitolectin_chitotriosidase, This co | 1e-58 | |
| cd06548 | 322 | cd06548, GH18_chitinase, The GH18 (glycosyl hydrol | 6e-32 | |
| COG3325 | 441 | COG3325, ChiA, Chitinase [Carbohydrate transport a | 1e-28 | |
| cd02873 | 413 | cd02873, GH18_IDGF, The IDGF's (imaginal disc grow | 6e-27 | |
| cd00598 | 210 | cd00598, GH18_chitinase-like, The GH18 (glycosyl h | 1e-21 | |
| cd06545 | 253 | cd06545, GH18_3CO4_chitinase, The Bacteroides thet | 3e-09 | |
| cd02874 | 313 | cd02874, GH18_CFLE_spore_hydrolase, Cortical fragm | 3e-07 | |
| COG3858 | 423 | COG3858, COG3858, Predicted glycosyl hydrolase [Ge | 5e-07 | |
| cd02875 | 358 | cd02875, GH18_chitobiase, Chitobiase (also known a | 6e-06 |
| >gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes | Back alignment and domain information |
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Score = 341 bits (876), Expect = e-116
Identities = 148/343 (43%), Positives = 206/343 (60%), Gaps = 49/343 (14%)
Query: 24 QTLIRAGYWDSDDG-FPVSDVNSALFTHLMCGFADVNSTSYELSLSPSDEKQFSNFTDTV 82
T+++ GYW + FP S+++S+LFTHL FAD++ ++YE+ +SPSDE +FS FT+TV
Sbjct: 1 STIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETV 60
Query: 83 KIKNPSITTLLSIGGGNNPNYSSYSSMAGNPSFRKYFIDSSIKIARLYGFQGLDLSWNQA 142
K KNPS+ TLLSIGGG + + S++++MA +P+ RK FI+SSIK+AR YGF GLDL W
Sbjct: 61 KRKNPSVKTLLSIGGGGS-DSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFP 119
Query: 143 NTSRDKYNIGILFKEWRAAVALEARNNSSQSQLILTAKVAYSPLSTAAA----YPVDSIR 198
++ + N G L +EWRAAV EAR+ S + L+LTA V +SP+ + YP+++I
Sbjct: 120 SSQVEMENFGKLLEEWRAAVKDEARS-SGRPPLLLTAAVYFSPILFLSDDSVSYPIEAIN 178
Query: 199 QYLNWVHVITTEYSSPTWQNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLPF 258
+ L+WV+V+ +Y N TG AALYDPNS +T+YGI WI+ G+ A KLVL LP
Sbjct: 179 KNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPL 238
Query: 259 YGYAWTLVKPEDNGIGAAATGPALHDDGLVTYKEVKNHIKNYGPNVQVMYNSTYVVNYCS 318
YG AWTL Y++T V +Y
Sbjct: 239 YGRAWTL------------------------------------------YDTTTVSSYVY 256
Query: 319 IGKIWFGFDDVEAVRVKVAYAKEKKLRGYYVWEVSSDHYWMLS 361
G W G+DDV+++ VKV YAK+K L GY+ W V D LS
Sbjct: 257 AGTTWIGYDDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNWLS 299
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The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299 |
| >gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain | Back alignment and domain information |
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| >gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 | Back alignment and domain information |
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| >gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases | Back alignment and domain information |
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| >gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites | Back alignment and domain information |
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| >gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster | Back alignment and domain information |
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| >gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods | Back alignment and domain information |
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| >gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas | Back alignment and domain information |
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| >gnl|CDD|119353 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination | Back alignment and domain information |
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| >gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only] | Back alignment and domain information |
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| >gnl|CDD|119354 cd02875, GH18_chitobiase, Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 409 | |||
| cd02879 | 299 | GH18_plant_chitinase_class_V The class V plant chi | 100.0 | |
| cd02872 | 362 | GH18_chitolectin_chitotriosidase This conserved do | 100.0 | |
| cd02873 | 413 | GH18_IDGF The IDGF's (imaginal disc growth factors | 100.0 | |
| KOG2806 | 432 | consensus Chitinase [Carbohydrate transport and me | 100.0 | |
| smart00636 | 334 | Glyco_18 Glycosyl hydrolase family 18. | 100.0 | |
| COG3325 | 441 | ChiA Chitinase [Carbohydrate transport and metabol | 100.0 | |
| cd02878 | 345 | GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin | 100.0 | |
| cd06548 | 322 | GH18_chitinase The GH18 (glycosyl hydrolases, fami | 100.0 | |
| PF00704 | 343 | Glyco_hydro_18: Glycosyl hydrolases family 18; Int | 100.0 | |
| cd02876 | 318 | GH18_SI-CLP Stabilin-1 interacting chitinase-like | 100.0 | |
| cd02875 | 358 | GH18_chitobiase Chitobiase (also known as di-N-ace | 100.0 | |
| cd02874 | 313 | GH18_CFLE_spore_hydrolase Cortical fragment-lytic | 100.0 | |
| cd06545 | 253 | GH18_3CO4_chitinase The Bacteroides thetaiotaomicr | 100.0 | |
| cd06549 | 298 | GH18_trifunctional GH18 domain of an uncharacteriz | 100.0 | |
| cd00598 | 210 | GH18_chitinase-like The GH18 (glycosyl hydrolase, | 100.0 | |
| COG3858 | 423 | Predicted glycosyl hydrolase [General function pre | 100.0 | |
| cd06544 | 253 | GH18_narbonin Narbonin is a plant 2S protein from | 100.0 | |
| cd06546 | 256 | GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase | 100.0 | |
| cd02871 | 312 | GH18_chitinase_D-like GH18 domain of Chitinase D ( | 99.98 | |
| KOG2091 | 392 | consensus Predicted member of glycosyl hydrolase f | 99.96 | |
| cd06542 | 255 | GH18_EndoS-like Endo-beta-N-acetylglucosaminidases | 99.93 | |
| cd02877 | 280 | GH18_hevamine_XipI_class_III This conserved domain | 99.93 | |
| cd06543 | 294 | GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch | 99.87 | |
| COG3469 | 332 | Chitinase [Carbohydrate transport and metabolism] | 99.74 | |
| KOG4701 | 568 | consensus Chitinase [Cell wall/membrane/envelope b | 99.6 | |
| cd06547 | 339 | GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG | 98.4 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 98.04 | |
| PF03644 | 311 | Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int | 97.88 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 97.78 | |
| PF11340 | 181 | DUF3142: Protein of unknown function (DUF3142); In | 97.52 | |
| KOG2331 | 526 | consensus Predicted glycosylhydrolase [General fun | 95.41 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 94.59 | |
| PF14883 | 294 | GHL13: Hypothetical glycosyl hydrolase family 13 | 94.02 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 87.98 | |
| cd02810 | 289 | DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) | 87.01 | |
| TIGR01370 | 315 | cysRS possible cysteinyl-tRNA synthetase, Methanoc | 86.76 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 86.71 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 86.56 | |
| cd02930 | 353 | DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin | 85.67 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 85.55 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 85.26 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 84.2 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 83.82 | |
| COG1306 | 400 | Uncharacterized conserved protein [Function unknow | 83.52 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 82.02 | |
| cd04734 | 343 | OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN | 81.7 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 81.47 | |
| PLN02960 | 897 | alpha-amylase | 81.28 | |
| PRK14581 | 672 | hmsF outer membrane N-deacetylase; Provisional | 80.99 |
| >cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-68 Score=506.56 Aligned_cols=291 Identities=50% Similarity=0.914 Sum_probs=265.5
Q ss_pred cEEEEEEeCCC-CCCCcCCCCCCccEEEEEEEEEeCCCeEEecCCcchhHHHHHHHHHHhhCCCcEEEEEEcCCCCCCCc
Q 043488 26 LIRAGYWDSDD-GFPVSDVNSALFTHLMCGFADVNSTSYELSLSPSDEKQFSNFTDTVKIKNPSITTLLSIGGGNNPNYS 104 (409)
Q Consensus 26 ~~v~gY~~~~~-~~~~~~i~~~~~Thii~~f~~i~~~~~~~~~~~~~~~~~~~~~~~lk~~~p~~kvllsiGG~~~~~~~ 104 (409)
-+++|||++|. .+.++++|.++||||+|+|+.++++++.+...+.+...+..+.+.+|+++|++|+++|||||+. +++
T Consensus 3 ~~~~~Y~~~w~~~~~~~~i~~~~~THi~yaf~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~lkvlisiGG~~~-~s~ 81 (299)
T cd02879 3 IVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETVKRKNPSVKTLLSIGGGGS-DSS 81 (299)
T ss_pred eEEEEEECCCCCCCChhHCCcccCCEEEEEEEEecCCCCEEeeccccHHHHHHHHHHHHHhCCCCeEEEEEeCCCC-CCc
Confidence 47899999966 8999999999999999999999998878887776677788888889999999999999999986 568
Q ss_pred ccccccCChhHHHHHHHHHHHHHHHcCCCeEEEeeeccCCcccHhhHHHHHHHHHHHHHHHhhcCCCCceeEEEEEeecC
Q 043488 105 SYSSMAGNPSFRKYFIDSSIKIARLYGFQGLDLSWNQANTSRDKYNIGILFKEWRAAVALEARNNSSQSQLILTAKVAYS 184 (409)
Q Consensus 105 ~~~~~~~~~~~r~~fi~sii~~l~~~~~DGIdiDwE~p~~~~~~~~~~~ll~~Lr~~l~~~~~~~~~~~~~~Ls~a~~~~ 184 (409)
.|+.++++++.|++|++++++++++|||||||||||+|..++|+++|+.|+++||++|+++.+ ++++.+++||+++|+.
T Consensus 82 ~fs~~~~~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~~~d~~n~~~ll~elr~~l~~~~~-~~~~~~~~ls~av~~~ 160 (299)
T cd02879 82 AFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPSSQVEMENFGKLLEEWRAAVKDEAR-SSGRPPLLLTAAVYFS 160 (299)
T ss_pred hhhHHhCCHHHHHHHHHHHHHHHHHhCCCceeecccCCCChhHHHHHHHHHHHHHHHHHHHhh-ccCCCcEEEEeecccc
Confidence 999999999999999999999999999999999999998878999999999999999997665 5565679999999876
Q ss_pred ccc----ccCCCChhHHhccccEEEeeccCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHcCCCCCceEEecceee
Q 043488 185 PLS----TAAAYPVDSIRQYLNWVHVITTEYSSPTWQNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLPFYG 260 (409)
Q Consensus 185 ~~~----~~~~y~~~~l~~~vD~v~vm~YD~~~~~~~~~~~~~apl~~~~~~~~~~~~v~~~~~~g~p~~KivlGlp~yG 260 (409)
+.. ....||++++.++|||||||+||+||+|....++|+|||+.+.+.++++.+|++|++.|+|++||+||+||||
T Consensus 161 ~~~~~~~~~~~yd~~~l~~~vD~i~vMtYD~~g~~~~~~~~~~a~l~~~~~~~~~~~~v~~~~~~g~p~~KlvlGvp~YG 240 (299)
T cd02879 161 PILFLSDDSVSYPIEAINKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPLYG 240 (299)
T ss_pred hhhccccccccCCHHHHHhhCCEEEEEeecccCCCCCCCCCCCCcCCCCCCCCCHHHHHHHHHHcCCCHHHEEEEecccc
Confidence 654 3446899999999999999999999999877789999999887778999999999999999999999999999
Q ss_pred EEeeeccCCCCCCCCCccCCCCCCCCcccHHHHHHhhhcCCCCeEEEEeccceeEEEEeCcEEEEECCHHHHHHHHHHHH
Q 043488 261 YAWTLVKPEDNGIGAAATGPALHDDGLVTYKEVKNHIKNYGPNVQVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVAYAK 340 (409)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Sl~~K~~~~~ 340 (409)
|.|++ ||+.++++|.+.+++||+|||++|++.|++||+
T Consensus 241 r~~~~------------------------------------------~D~~~~~~y~~~~~~wi~ydd~~Si~~K~~~a~ 278 (299)
T cd02879 241 RAWTL------------------------------------------YDTTTVSSYVYAGTTWIGYDDVQSIAVKVKYAK 278 (299)
T ss_pred ccccc------------------------------------------cCCCcceEEEEECCEEEEeCCHHHHHHHHHHHH
Confidence 99952 677788999999999999999999999999999
Q ss_pred HcCCceEEEEeccCCCchhH
Q 043488 341 EKKLRGYYVWEVSSDHYWML 360 (409)
Q Consensus 341 ~~glgGi~iW~l~~Dd~~~L 360 (409)
++||||+|+|++++||++.|
T Consensus 279 ~~~lgGv~~W~l~~Dd~~~~ 298 (299)
T cd02879 279 QKGLLGYFAWAVGYDDNNWL 298 (299)
T ss_pred hCCCCeEEEEEeecCCcccc
Confidence 99999999999999998765
|
The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. |
| >cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases | Back alignment and domain information |
|---|
| >cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster | Back alignment and domain information |
|---|
| >KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >smart00636 Glyco_18 Glycosyl hydrolase family 18 | Back alignment and domain information |
|---|
| >COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd02878 GH18_zymocin_alpha Zymocin, alpha subunit | Back alignment and domain information |
|---|
| >cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites | Back alignment and domain information |
|---|
| >PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome | Back alignment and domain information |
|---|
| >cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
| >cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination | Back alignment and domain information |
|---|
| >cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas | Back alignment and domain information |
|---|
| >cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain | Back alignment and domain information |
|---|
| >cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods | Back alignment and domain information |
|---|
| >COG3858 Predicted glycosyl hydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L | Back alignment and domain information |
|---|
| >cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii | Back alignment and domain information |
|---|
| >cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) | Back alignment and domain information |
|---|
| >KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins | Back alignment and domain information |
|---|
| >cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain | Back alignment and domain information |
|---|
| >cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain | Back alignment and domain information |
|---|
| >COG3469 Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
| >PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
| >KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain | Back alignment and domain information |
|---|
| >TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type | Back alignment and domain information |
|---|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
| >cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain | Back alignment and domain information |
|---|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >COG1306 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 | Back alignment and domain information |
|---|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
| >PRK14581 hmsF outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 409 | ||||
| 3aqu_A | 356 | Crystal Structure Of A Class V Chitinase From Arabi | 7e-74 | ||
| 3alg_A | 353 | Crystal Structure Of Class V Chitinase (E115q Mutan | 1e-71 | ||
| 3alf_A | 353 | Crystal Structure Of Class V Chitinase From Nicotia | 1e-71 | ||
| 1guv_A | 366 | Structure Of Human Chitotriosidase Length = 366 | 1e-33 | ||
| 1hkk_A | 364 | High Resoultion Crystal Structure Of Human Chitinas | 2e-33 | ||
| 1hki_A | 365 | Crystal Structure Of Human Chitinase In Complex Wit | 3e-33 | ||
| 1lg1_A | 365 | Crystal Structure Of Human Chitotriosidase In Compl | 3e-33 | ||
| 1waw_A | 445 | Specificity And Affinity Of Natural Product Cyclope | 8e-33 | ||
| 3fxy_A | 395 | Acidic Mammalian Chinase, Catalytic Domain Length = | 1e-32 | ||
| 2ybt_A | 381 | Crystal Structure Of Human Acidic Chitinase In Comp | 2e-32 | ||
| 1hjv_A | 362 | Crystal Structure Of Hcgp-39 In Complex With Chitin | 2e-31 | ||
| 1syt_A | 361 | Crystal Structure Of Signalling Protein From Goat S | 1e-27 | ||
| 1ljy_A | 361 | Crystal Structure Of A Novel Regulatory 40 Kda Mamm | 1e-27 | ||
| 1zbv_A | 361 | Crystal Structure Of The Goat Signalling Protein (S | 2e-27 | ||
| 2pi6_A | 361 | Crystal Structure Of The Sheep Signalling Glycoprot | 8e-27 | ||
| 1sr0_A | 361 | Crystal Structure Of Signalling Protein From Sheep( | 9e-27 | ||
| 2esc_A | 361 | Crystal Structure Of A 40 Kda Protective Signalling | 1e-26 | ||
| 1owq_A | 361 | Crystal Structure Of A 40 Kda Signalling Protein (S | 1e-26 | ||
| 1xhg_A | 361 | Crystal Structure Of A 40 Kda Signalling Protein Fr | 2e-26 | ||
| 1tfv_A | 361 | Crystal Structure Of A Buffalo Signaling Glycoprote | 4e-26 | ||
| 1e9l_A | 377 | The Crystal Structure Of Novel Mammalian Lectin Ym1 | 5e-25 | ||
| 4ay1_A | 365 | Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch | 1e-23 | ||
| 1itx_A | 419 | Catalytic Domain Of Chitinase A1 From Bacillus Circ | 1e-14 | ||
| 1ll6_A | 392 | Structure Of The D169n Mutant Of C. Immitis Chitina | 2e-11 | ||
| 1ll7_A | 392 | Structure Of The E171q Mutant Of C. Immitis Chitina | 2e-11 | ||
| 1d2k_A | 392 | C. Immitis Chitinase 1 At 2.2 Angstroms Resolution | 2e-11 | ||
| 1w9p_A | 433 | Specificity And Affinity Of Natural Product Cyclope | 3e-11 | ||
| 1wno_A | 395 | Crystal Structure Of A Native Chitinase From Asperg | 8e-11 | ||
| 3g6l_A | 406 | The Crystal Structure Of A Chitinase Crchi1 From Th | 2e-10 | ||
| 1ur9_A | 499 | Interactions Of A Family 18 Chitinase With The Desi | 8e-10 | ||
| 1e6n_B | 499 | Chitinase B From Serratia Marcescens Inactive Mutan | 9e-10 | ||
| 1e15_A | 499 | Chitinase B From Serratia Marcescens Length = 499 | 9e-10 | ||
| 1ogb_A | 499 | Chitinase B From Serratia Marcescens Mutant D142n L | 9e-10 | ||
| 1h0g_A | 499 | Complex Of A Chitinase With The Natural Product Cyc | 1e-09 | ||
| 1e6z_A | 498 | Chitinase B From Serratia Marcescens Wildtype In Co | 1e-09 | ||
| 1goi_A | 499 | Crystal Structure Of The D140n Mutant Of Chitinase | 4e-09 | ||
| 1jnd_A | 420 | Crystal Structure Of Imaginal Disc Growth Factor-2 | 5e-09 | ||
| 1rd6_A | 563 | Crystal Structure Of S. Marcescens Chitinase A Muta | 1e-08 | ||
| 1ctn_A | 540 | Crystal Structure Of A Bacterial Chitinase At 2.3 A | 1e-08 | ||
| 2wly_A | 548 | Chitinase A From Serratia Marcescens Atcc990 In Com | 1e-08 | ||
| 2wk2_A | 540 | Chitinase A From Serratia Marcescens Atcc990 In Com | 2e-08 | ||
| 1eib_A | 540 | Crystal Structure Of Chitinase A Mutant D313a Compl | 2e-08 | ||
| 1k9t_A | 540 | Chitinase A Complexed With Tetra-N-Acetylchitotrios | 2e-08 | ||
| 1ffr_A | 540 | Crystal Structure Of Chitinase A Mutant Y390f Compl | 2e-08 | ||
| 1ehn_A | 540 | Crystal Structure Of Chitinase A Mutant E315q Compl | 2e-08 | ||
| 1edq_A | 540 | Crystal Structure Of Chitinase A From S. Marcescens | 3e-08 | ||
| 1nh6_A | 540 | Structure Of S. Marcescens Chitinase A, E315l, Comp | 3e-08 | ||
| 3ars_A | 584 | Crystal Structure Analysis Of Chitinase A From Vibr | 6e-08 | ||
| 3b8s_A | 584 | Crystal Structure Of Wild-Type Chitinase A From Vib | 7e-08 | ||
| 3b9a_A | 584 | Crystal Structure Of Vibrio Harveyi Chitinase A Com | 1e-07 | ||
| 3qok_A | 420 | Crystal Structure Of Putative Chitinase Ii From Kle | 2e-06 | ||
| 1kfw_A | 435 | Structure Of Catalytic Domain Of Psychrophilic Chit | 1e-05 |
| >pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 | Back alignment and structure |
|
| >pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 | Back alignment and structure |
| >pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 | Back alignment and structure |
| >pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 | Back alignment and structure |
| >pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 | Back alignment and structure |
| >pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 | Back alignment and structure |
| >pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 | Back alignment and structure |
| >pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 | Back alignment and structure |
| >pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 | Back alignment and structure |
| >pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 | Back alignment and structure |
| >pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 | Back alignment and structure |
| >pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 | Back alignment and structure |
| >pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 | Back alignment and structure |
| >pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 | Back alignment and structure |
| >pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 | Back alignment and structure |
| >pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 | Back alignment and structure |
| >pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 | Back alignment and structure |
| >pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 | Back alignment and structure |
| >pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 | Back alignment and structure |
| >pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 | Back alignment and structure |
| >pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 | Back alignment and structure |
| >pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 | Back alignment and structure |
| >pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 | Back alignment and structure |
| >pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1 Length = 392 | Back alignment and structure |
| >pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1 Length = 392 | Back alignment and structure |
| >pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution Length = 392 | Back alignment and structure |
| >pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 | Back alignment and structure |
| >pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 | Back alignment and structure |
| >pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 | Back alignment and structure |
| >pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed Inhibitor Hm508, And Its Degradation Product, Chitobiono-Delta-Lactone Length = 499 | Back alignment and structure |
| >pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer Length = 499 | Back alignment and structure |
| >pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens Length = 499 | Back alignment and structure |
| >pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n Length = 499 | Back alignment and structure |
| >pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys Length = 499 | Back alignment and structure |
| >pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate Length = 498 | Back alignment and structure |
| >pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From Serratia Marcescens At 1.45 A Resolution Length = 499 | Back alignment and structure |
| >pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 | Back alignment and structure |
| >pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant W167a Length = 563 | Back alignment and structure |
| >pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3 Angstroms Resolution Length = 540 | Back alignment and structure |
| >pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline. Length = 548 | Back alignment and structure |
| >pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline Dithioamide Length = 540 | Back alignment and structure |
| >pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 | Back alignment and structure |
| >pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose Length = 540 | Back alignment and structure |
| >pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed With Hexa-n- Acetylchitohexaose (nag)6 Length = 540 | Back alignment and structure |
| >pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 | Back alignment and structure |
| >pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At 1.55 Angstroms Length = 540 | Back alignment and structure |
| >pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex With Hexasaccharide Length = 540 | Back alignment and structure |
| >pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 | Back alignment and structure |
| >pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 | Back alignment and structure |
| >pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 | Back alignment and structure |
| >pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae Length = 420 | Back alignment and structure |
| >pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B From Arthrobacter Tad20 Length = 435 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 | Back alignment and structure |
|---|
Score = 328 bits (842), Expect = e-111
Identities = 145/354 (40%), Positives = 211/354 (59%), Gaps = 8/354 (2%)
Query: 27 IRAGYWDSDDGFPVSDVNSALFTHLMCGFADVNSTSYELSLSPSDEKQFSNFTDTVKIKN 86
++ GYW D G +++++S LFTHL C FAD+N +L +SP ++ F FT TV+ KN
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKN 63
Query: 87 PSITTLLSIGGGNNPNYSSYSSMAGNPSFRKYFIDSSIKIARLYGFQGLDLSWNQANTSR 146
PS+ T LSI GG N ++Y MA P+ RK FIDSSI++AR GF GLDL W ++
Sbjct: 64 PSVKTFLSIAGGRA-NSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAA 122
Query: 147 DKYNIGILFKEWRAAVALEARNNSSQSQLILTAKVAYSPLSTAAAYPVDSIRQYLNWVHV 206
D N+G L EWR A+ EAR NS ++ L+LTA V+ SP YPV+S+ + L+W+++
Sbjct: 123 DMTNLGTLLNEWRTAINTEAR-NSGRAALLLTAAVSNSPRVNGLNYPVESLARNLDWINL 181
Query: 207 ITTEYSSPTW-QNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLPFYGYAWTL 265
+ ++ P W + T +HA L+DP + + GI WI+ G+ KLVL +PFYGYAW L
Sbjct: 182 MAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGYAWRL 241
Query: 266 VKPEDNGIGAAATGPAL---HDDGLVTYKEVKNHIKNYGPNVQVMYNSTYVVNYCSIGKI 322
V +G+ A A G + DDG +TY ++++I +YN+T V +YC G
Sbjct: 242 VNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESR--ATTVYNATIVGDYCYSGSN 299
Query: 323 WFGFDDVEAVRVKVAYAKEKKLRGYYVWEVSSDHYWMLSQAAAEEDKRNRQNKR 376
W +DD + VR KV Y K + L GY+ W V+ D W LS+ A++ + Q +
Sbjct: 300 WISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTASQTWGVSFQEMK 353
|
| >3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 | Back alignment and structure |
|---|
| >3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 | Back alignment and structure |
|---|
| >4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
| >1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 | Back alignment and structure |
|---|
| >2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 | Back alignment and structure |
|---|
| >1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 | Back alignment and structure |
|---|
| >3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 | Back alignment and structure |
|---|
| >1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 | Back alignment and structure |
|---|
| >3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 | Back alignment and structure |
|---|
| >1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 | Back alignment and structure |
|---|
| >1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 | Back alignment and structure |
|---|
| >1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 | Back alignment and structure |
|---|
| >1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 | Back alignment and structure |
|---|
| >3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 | Back alignment and structure |
|---|
| >1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 | Back alignment and structure |
|---|
| >3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 | Back alignment and structure |
|---|
| >3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 | Back alignment and structure |
|---|
| >3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 | Back alignment and structure |
|---|
| >3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 | Back alignment and structure |
|---|
| >3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 | Back alignment and structure |
|---|
| >3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 | Back alignment and structure |
|---|
| >1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 | Back alignment and structure |
|---|
| >2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 | Back alignment and structure |
|---|
| >1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 | Back alignment and structure |
|---|
| >3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Length = 321 | Back alignment and structure |
|---|
| >3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 | Back alignment and structure |
|---|
| >2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Length = 289 | Back alignment and structure |
|---|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Length = 451 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Length = 311 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 409 | |||
| 3alf_A | 353 | Chitinase, class V; hydrolase; 1.20A {Nicotiana ta | 100.0 | |
| 3aqu_A | 356 | AT4G19810; stress response, TIM barrel, hydrolase, | 100.0 | |
| 3fy1_A | 395 | Amcase, TSA1902, acidic mammalian chitinase; struc | 100.0 | |
| 4ay1_A | 365 | Chitinase-3-like protein 2; chilectin, lectin, chi | 100.0 | |
| 1vf8_A | 377 | YM1, secretory protein; chitinase, CHI-lectin, str | 100.0 | |
| 2pi6_A | 361 | Chitinase-3-like protein 1; complex, signaling pro | 100.0 | |
| 1wb0_A | 445 | Chitinase 1, chitotriosidase 1; cyclopentapeptide | 100.0 | |
| 1itx_A | 419 | Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) | 100.0 | |
| 3qok_A | 420 | Putative chitinase II; structural genomics, PSI-bi | 100.0 | |
| 3g6m_A | 406 | Chitinase, crchi1; inhibitor, caffeine, glycosidas | 100.0 | |
| 1kfw_A | 435 | Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob | 100.0 | |
| 1goi_A | 499 | Chitinase B; chitin degradation, hydrolase, glycos | 100.0 | |
| 1edq_A | 540 | Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 | 100.0 | |
| 1ll7_A | 392 | Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { | 100.0 | |
| 3arx_A | 584 | Chitinase A; TIM barrel, inhibitor complex, glycos | 100.0 | |
| 1w9p_A | 433 | Chitinase; peptide inhibitors, argifin, argadin, g | 100.0 | |
| 1jnd_A | 420 | Imaginal DISC growth factor-2; IDGF, chitinase, in | 100.0 | |
| 3oa5_A | 574 | CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers | 100.0 | |
| 3cz8_A | 319 | Putative sporulation-specific glycosylase YDHD; st | 100.0 | |
| 3bxw_B | 393 | Chitinase domain-containing protein 1; TIM barrel, | 100.0 | |
| 3fnd_A | 312 | Chitinase; TIM-barrel, structural genomics, PSI-2, | 100.0 | |
| 1nar_A | 290 | Narbonin; plant SEED protein; 1.80A {Vicia narbone | 100.0 | |
| 3n12_A | 333 | Chitinase A, chinctu2; zinc atoms, complex, hydrol | 100.0 | |
| 3sim_A | 275 | Protein, family 18 chitinase; family 18 plant chit | 100.0 | |
| 2y8v_A | 290 | CHIC, class III chitinase, putative; afchic, hydro | 100.0 | |
| 4axn_A | 328 | Chitinase C1; hydrolase; 1.68A {Serratia marcescen | 100.0 | |
| 3ian_A | 321 | Chitinase; structural genomics, hydrolase, glycosi | 100.0 | |
| 3ebv_A | 302 | Chinitase A; chitinase A, CHIA, glycosidase, struc | 100.0 | |
| 4ac1_X | 283 | Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g | 100.0 | |
| 2gsj_A | 271 | Protein PPL-2; mimosoideae, chimerolectin, endochi | 100.0 | |
| 2hvm_A | 273 | Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He | 100.0 | |
| 1edt_A | 271 | Endo-beta-N-acetylglucosaminidase H, endo H; hydro | 100.0 | |
| 2uy2_A | 294 | Endochitinase; carbohydrate metabolism, polysaccha | 99.97 | |
| 1cnv_A | 299 | Concanavalin B; plant chitinase, chitin binding pr | 99.97 | |
| 1eok_A | 290 | Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b | 99.96 | |
| 2xtk_A | 310 | CHIA1, class III chitinase CHIA1; hydrolase, GH18; | 99.96 | |
| 2ebn_A | 289 | Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl | 99.95 | |
| 1ta3_A | 274 | XIP-1, xylanase inhibitor protein I; beta alpha ba | 99.94 | |
| 3mu7_A | 273 | XAIP-II, xylanase and alpha-amylase inhibitor prot | 99.91 | |
| 3poh_A | 451 | Endo-beta-N-acetylglucosaminidase F1; TIM barrel, | 99.86 | |
| 2dsk_A | 311 | Chitinase; catalytic domain, active domain, crysta | 99.82 | |
| 2w91_A | 653 | Endo-beta-N-acetylglucosaminidase D; hydrolase, N- | 97.56 | |
| 2vtf_A | 626 | Endo-beta-N-acetylglucosaminidase; hydrolase, fami | 97.5 | |
| 3gdb_A | 937 | Endo-D, putative uncharacterized protein SPR0440; | 87.9 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 84.28 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 83.85 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 83.59 | |
| 2aam_A | 309 | Hypothetical protein TM1410; structural genomics, | 80.92 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 80.75 |
| >3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-75 Score=572.28 Aligned_cols=342 Identities=42% Similarity=0.791 Sum_probs=314.6
Q ss_pred CcEEEEEEeCCCCCCCcCCCCCCccEEEEEEEEEeCCCeEEecCCcchhHHHHHHHHHHhhCCCcEEEEEEcCCCCCCCc
Q 043488 25 TLIRAGYWDSDDGFPVSDVNSALFTHLMCGFADVNSTSYELSLSPSDEKQFSNFTDTVKIKNPSITTLLSIGGGNNPNYS 104 (409)
Q Consensus 25 ~~~v~gY~~~~~~~~~~~i~~~~~Thii~~f~~i~~~~~~~~~~~~~~~~~~~~~~~lk~~~p~~kvllsiGG~~~~~~~ 104 (409)
+++++|||...+.+.+++|+.++||||+|+|+.++++++.+...+.++..+..+++.+|+++|++|+++|||||+. ++.
T Consensus 2 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~~~~~~~~~~~~lk~~~~~lkvllsiGG~~~-~~~ 80 (353)
T 3alf_A 2 QNVKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKNPSVKTFLSIAGGRA-NST 80 (353)
T ss_dssp CCEEEEEEEGGGCCCGGGCCGGGCSEEEEEEEEEETTTTEEECCHHHHHHHHHHHHHHHHHCTTCEEEEEEECTTS-CHH
T ss_pred CceEEEEEecCCCCCHhHCCcccCCEEEEEEEEeeCCCCEEEeCCccHHHHHHHHHHHHhhCCCCeEEEEECCCCC-Cch
Confidence 5789999966678999999999999999999999998778887766667788888889999999999999999986 578
Q ss_pred ccccccCChhHHHHHHHHHHHHHHHcCCCeEEEeeeccCCcccHhhHHHHHHHHHHHHHHHhhcCCCCceeEEEEEeecC
Q 043488 105 SYSSMAGNPSFRKYFIDSSIKIARLYGFQGLDLSWNQANTSRDKYNIGILFKEWRAAVALEARNNSSQSQLILTAKVAYS 184 (409)
Q Consensus 105 ~~~~~~~~~~~r~~fi~sii~~l~~~~~DGIdiDwE~p~~~~~~~~~~~ll~~Lr~~l~~~~~~~~~~~~~~Ls~a~~~~ 184 (409)
.|+.++++++.|++|++++++++++|+|||||||||+|..++|+++|+.||++||++|+++++ .+++.+++||+++|+.
T Consensus 81 ~f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~-~~~~~~~~Ls~a~~~~ 159 (353)
T 3alf_A 81 AYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRTAINTEAR-NSGRAALLLTAAVSNS 159 (353)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHHH-HHCSCCCEEEEEEESS
T ss_pred hHHHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEEeeecCChhHHHHHHHHHHHHHHHHHHhhh-hcCCCceEEEEecccC
Confidence 899999999999999999999999999999999999997778999999999999999998765 5566679999999977
Q ss_pred cccccCCCChhHHhccccEEEeeccCCCCC-CCCCCCCCCCcCCCCCCCCcHHHHHHHHHHcCCCCCceEEecceeeEEe
Q 043488 185 PLSTAAAYPVDSIRQYLNWVHVITTEYSSP-TWQNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLPFYGYAW 263 (409)
Q Consensus 185 ~~~~~~~y~~~~l~~~vD~v~vm~YD~~~~-~~~~~~~~~apl~~~~~~~~~~~~v~~~~~~g~p~~KivlGlp~yG~~~ 263 (409)
+......|+++++.+++||||||+||+||+ |....+||+|||+++.+..+++.+|+.|++.|+|++||+||+|+|||.|
T Consensus 160 ~~~~~~~~d~~~l~~~vD~invMtYD~~g~~w~~~~~g~~a~l~~~~~~~~~~~~v~~~~~~gvp~~KlvlGip~YGr~~ 239 (353)
T 3alf_A 160 PRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGYAW 239 (353)
T ss_dssp SEETTEECCHHHHHHHCSEEEEECCCSSCTTTSTTBCCCSSCSCCTTTCCSHHHHHHHHHHTTCCGGGEEEEEESEEEEE
T ss_pred chhhhcCCCHHHHhhhccEEEEEEeeccCCCCCCCCCCCCCcCcCCCCCccHHHHHHHHHHcCCChHHEEEEeCCceeee
Confidence 655444689999999999999999999998 7657899999999887788999999999999999999999999999999
Q ss_pred eeccCCCCCCCCCccCC---CCCCCCcccHHHHHHhhhcCCCCeEEEEeccceeEEEEeCcEEEEECCHHHHHHHHHHHH
Q 043488 264 TLVKPEDNGIGAAATGP---ALHDDGLVTYKEVKNHIKNYGPNVQVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVAYAK 340 (409)
Q Consensus 264 ~~~~~~~~~~~~~~~g~---~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Sl~~K~~~~~ 340 (409)
++++++++++++|+.|+ +..+.|.++|.|||+++++++ ++..||+++++||+|.+++||+|||++|++.|++|++
T Consensus 240 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~y~ei~~~~~~~g--~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~K~~~~~ 317 (353)
T 3alf_A 240 RLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESR--ATTVYNATIVGDYCYSGSNWISYDDTQTVRNKVNYVK 317 (353)
T ss_dssp EESCTTCCSTTCBEEEECTTSCTTTCEEEHHHHHHHHHHHT--CEEEEETTTTEEEEEETTEEEEECCHHHHHHHHHHHH
T ss_pred eccCCcCCCCCCCCCCCCCCCCCCCCeEcHHHHHHHHhhCC--CeEEEccccceEEEEeCCEEEEcCCHHHHHHHHHHHH
Confidence 99999999999998877 556679999999999998888 9999999999999999999999999999999999999
Q ss_pred HcCCceEEEEeccCCCchhHHHHHHHhhhc
Q 043488 341 EKKLRGYYVWEVSSDHYWMLSQAAAEEDKR 370 (409)
Q Consensus 341 ~~glgGi~iW~l~~Dd~~~L~~a~~~~~~~ 370 (409)
++||||+|+|++++||.+.|++|+.+..++
T Consensus 318 ~~gLgGv~~W~l~~Dd~~~ll~a~~~~l~~ 347 (353)
T 3alf_A 318 GRGLLGYFAWHVAGDQNWGLSRTASQTWGV 347 (353)
T ss_dssp HTTCSEEEEECGGGSSTTHHHHHHHHHHCS
T ss_pred hCCCCEEEEEeccCCCCchHHHHHHHHhCc
Confidence 999999999999999999999999998876
|
| >3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* | Back alignment and structure |
|---|
| >4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
| >1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A | Back alignment and structure |
|---|
| >2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* | Back alignment and structure |
|---|
| >1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 | Back alignment and structure |
|---|
| >3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* | Back alignment and structure |
|---|
| >1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 | Back alignment and structure |
|---|
| >1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* | Back alignment and structure |
|---|
| >1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* | Back alignment and structure |
|---|
| >1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A | Back alignment and structure |
|---|
| >3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* | Back alignment and structure |
|---|
| >1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* | Back alignment and structure |
|---|
| >1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* | Back alignment and structure |
|---|
| >3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A | Back alignment and structure |
|---|
| >3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
| >3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A | Back alignment and structure |
|---|
| >1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 | Back alignment and structure |
|---|
| >3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* | Back alignment and structure |
|---|
| >3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} | Back alignment and structure |
|---|
| >2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} | Back alignment and structure |
|---|
| >4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} | Back alignment and structure |
|---|
| >3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
| >3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} | Back alignment and structure |
|---|
| >4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} | Back alignment and structure |
|---|
| >2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} | Back alignment and structure |
|---|
| >2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* | Back alignment and structure |
|---|
| >1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A | Back alignment and structure |
|---|
| >2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* | Back alignment and structure |
|---|
| >1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 | Back alignment and structure |
|---|
| >1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* | Back alignment and structure |
|---|
| >2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* | Back alignment and structure |
|---|
| >2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 | Back alignment and structure |
|---|
| >1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* | Back alignment and structure |
|---|
| >3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* | Back alignment and structure |
|---|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A | Back alignment and structure |
|---|
| >2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* | Back alignment and structure |
|---|
| >2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* | Back alignment and structure |
|---|
| >3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A | Back alignment and structure |
|---|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 | Back alignment and structure |
|---|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 409 | ||||
| d1goia2 | 356 | c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic | 2e-39 | |
| d1wb0a1 | 297 | c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma | 2e-34 | |
| d1wb0a1 | 297 | c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma | 7e-06 | |
| d1vf8a1 | 302 | c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin | 4e-34 | |
| d1vf8a1 | 302 | c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin | 1e-04 | |
| d1w9pa1 | 333 | c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil | 2e-33 | |
| d1ll7a1 | 330 | c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( | 4e-33 | |
| d1edqa2 | 358 | c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt | 9e-32 | |
| d2pi6a1 | 292 | c.1.8.5 (A:1-239,A:308-361) Signal processing prot | 1e-30 | |
| d2pi6a1 | 292 | c.1.8.5 (A:1-239,A:308-361) Signal processing prot | 2e-05 | |
| d1jnda1 | 327 | c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f | 2e-28 | |
| d1kfwa1 | 374 | c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina | 3e-25 | |
| d1itxa1 | 347 | c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu | 2e-22 | |
| d1itxa1 | 347 | c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu | 1e-07 | |
| d1nara_ | 289 | c.1.8.5 (A:) Seed storage protein {Vicia narbonens | 1e-19 | |
| d2ebna_ | 285 | c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl | 4e-15 | |
| d1edta_ | 265 | c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St | 3e-14 | |
| d2hvma_ | 273 | c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para | 2e-12 | |
| d1ta3a_ | 274 | c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I { | 2e-11 | |
| d1vf8a2 | 70 | d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo | 9e-10 | |
| d1wb0a2 | 68 | d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo | 6e-07 | |
| d1itxa2 | 72 | d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circul | 1e-06 | |
| d2pi6a2 | 68 | d.26.3.1 (A:240-307) Signal processing protein (SP | 2e-05 | |
| d1eoka_ | 282 | c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl | 3e-05 | |
| d1edqa3 | 73 | d.26.3.1 (A:444-516) Chitinase A {Serratia marcesc | 5e-05 | |
| d1kfwa2 | 61 | d.26.3.1 (A:328-388) Psychrophilic chitinase B {Ar | 7e-04 | |
| d1cnva_ | 283 | c.1.8.5 (A:) Seed storage protein {Jack bean (Cana | 0.002 |
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase B, catalytic domain species: Serratia marcescens [TaxId: 615]
Score = 142 bits (359), Expect = 2e-39
Identities = 66/340 (19%), Positives = 127/340 (37%), Gaps = 54/340 (15%)
Query: 31 YWDSDDGFPVSDVNSAL---FTHLMCGFADVNST---SYELSLSPSDEKQFSNFTDTVKI 84
S FPVS++ A TH+ F D+NS +++ + + + + N +K
Sbjct: 22 TDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKA 81
Query: 85 KNPSITTLLSIGGGN-----NPNYSSYSSMAGNPSFRKYFIDSSIKIARLYGFQGLDLSW 139
NPS+ + SIGG ++++Y + P+ R F S ++I + YGF G+++ W
Sbjct: 82 HNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDW 141
Query: 140 NQANTSRDKYNIGILFKEWRAAV-ALEARNNSSQSQLILTAKVAYSPLSTAAAY-PVDSI 197
+ + +E R + + LT A + Y + I
Sbjct: 142 EY-PQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQI 200
Query: 198 RQYLNWVHVITTEYSSPTWQNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLP 257
L++++++T + + P W+ T AAL+ + L
Sbjct: 201 VAPLDYINLMTYDLAGP-WEKVTNHQAALFGDAAGP---------------TFYNALREA 244
Query: 258 FYGYAWTLVKPEDNGIGAAATGPALHDDGLVTYKEVKNHIKNYGPNVQVMYNSTYVVNYC 317
G++W + + A V+ H+ G + ++ V+
Sbjct: 245 NLGWSWEELTRAFPSPFSLTVDAA-----------VQQHLMMEG-----VPSAKIVM--- 285
Query: 318 SIGKIWFGFDDVEAVRVKVAYAKEKKLRGYYVWEVSSDHY 357
FDD E+ + K Y K+++L G W + D+
Sbjct: 286 -----GVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNR 320
|
| >d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
| >d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
| >d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 | Back information, alignment and structure |
|---|
| >d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 | Back information, alignment and structure |
|---|
| >d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 | Back information, alignment and structure |
|---|
| >d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 | Back information, alignment and structure |
|---|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 | Back information, alignment and structure |
|---|
| >d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 | Back information, alignment and structure |
|---|
| >d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 | Back information, alignment and structure |
|---|
| >d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 | Back information, alignment and structure |
|---|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 | Back information, alignment and structure |
|---|
| >d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 | Back information, alignment and structure |
|---|
| >d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 | Back information, alignment and structure |
|---|
| >d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 | Back information, alignment and structure |
|---|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 | Back information, alignment and structure |
|---|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 | Back information, alignment and structure |
|---|
| >d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 273 | Back information, alignment and structure |
|---|
| >d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274 | Back information, alignment and structure |
|---|
| >d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 | Back information, alignment and structure |
|---|
| >d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 68 | Back information, alignment and structure |
|---|
| >d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 72 | Back information, alignment and structure |
|---|
| >d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 68 | Back information, alignment and structure |
|---|
| >d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Length = 282 | Back information, alignment and structure |
|---|
| >d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Length = 73 | Back information, alignment and structure |
|---|
| >d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 61 | Back information, alignment and structure |
|---|
| >d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Length = 283 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 409 | |||
| d1kfwa1 | 374 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 100.0 | |
| d1itxa1 | 347 | Chitinase A1 {Bacillus circulans [TaxId: 1397]} | 100.0 | |
| d2pi6a1 | 292 | Signal processing protein (SPC-40, MGP-40) {Sheep | 100.0 | |
| d1wb0a1 | 297 | Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1w9pa1 | 333 | Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | 100.0 | |
| d1edqa2 | 358 | Chitinase A, catalytic domain {Serratia marcescens | 100.0 | |
| d1vf8a1 | 302 | Chitinase-like lectin ym1, saccharide binding doma | 100.0 | |
| d1ll7a1 | 330 | Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: | 100.0 | |
| d1jnda1 | 327 | Imaginal disc growth factor-2 {Fruit fly (Drosophi | 100.0 | |
| d1goia2 | 356 | Chitinase B, catalytic domain {Serratia marcescens | 100.0 | |
| d1nara_ | 289 | Seed storage protein {Vicia narbonensis, Narbonin | 100.0 | |
| d2hvma_ | 273 | Hevamine A (chitinase/lysozyme) {Para rubber tree | 99.96 | |
| d1edta_ | 265 | Endo-beta-N-acetylglucosaminidase {Streptomyces pl | 99.96 | |
| d2ebna_ | 285 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 99.95 | |
| d1ta3a_ | 274 | Xylanase inhibitor protein I, XIP-I {Wheat (Tritic | 99.94 | |
| d1cnva_ | 283 | Seed storage protein {Jack bean (Canavalia ensifor | 99.94 | |
| d1eoka_ | 282 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 99.82 | |
| d1vf8a2 | 70 | Chitinase-like lectin ym1 {Mouse (Mus musculus) [T | 99.41 | |
| d1wb0a2 | 68 | Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 | 99.27 | |
| d2pi6a2 | 68 | Signal processing protein (SPC-40, MGP-40) {Sheep | 99.21 | |
| d1itxa2 | 72 | Chitinase A1 {Bacillus circulans [TaxId: 1397]} | 99.02 | |
| d1edqa3 | 73 | Chitinase A {Serratia marcescens [TaxId: 615]} | 98.93 | |
| d1kfwa2 | 61 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 98.8 | |
| d1jnda2 | 92 | Imaginal disc growth factor-2 {Fruit fly (Drosophi | 98.6 | |
| d1goia3 | 88 | Chitinase B {Serratia marcescens [TaxId: 615]} | 98.22 | |
| d1w9pa2 | 62 | Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | 98.11 | |
| d1ll7a2 | 62 | Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: | 98.11 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 91.79 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 84.87 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 84.5 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 82.62 | |
| d2aama1 | 285 | Hypothetical protein TM1410 {Thermotoga maritima [ | 81.53 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 80.91 |
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Psychrophilic chitinase B species: Arthrobacter sp., tad20 [TaxId: 1667]
Probab=100.00 E-value=4.4e-58 Score=447.49 Aligned_cols=281 Identities=20% Similarity=0.335 Sum_probs=239.3
Q ss_pred CcccCCcEEEEEEeCCCC----CC----CcCCCCCCccEEEEEEEEEeCCCeEEecC-----------------------
Q 043488 20 PARAQTLIRAGYWDSDDG----FP----VSDVNSALFTHLMCGFADVNSTSYELSLS----------------------- 68 (409)
Q Consensus 20 ~~~~~~~~v~gY~~~~~~----~~----~~~i~~~~~Thii~~f~~i~~~~~~~~~~----------------------- 68 (409)
++.....+++|||++|.. +. +.+++.++||||+|+|+.+++++..+...
T Consensus 3 ~~~~~g~rvvgYy~~W~~y~r~~~~~~l~~~i~~~~lTHi~YAFa~i~~~~~~~~~~~~~~~~~~~g~~~~~d~~~d~~~ 82 (374)
T d1kfwa1 3 TSTVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNGSDGAGDAWADFGM 82 (374)
T ss_dssp BSSBTTBEEEEEEEGGGGSTTCCCHHHHHHTSCGGGCSEEEEEEECBCTTTCSBCCCEECCCSSTTTTTTCEEHHHHHTC
T ss_pred CCCCCCCEEEEEECcceecCCCCChhhCcCCCChhhCCEEEEeeeeecCCcceeeccccccccCCCCccccCcchhhhcc
Confidence 355677899999998643 33 35677889999999999999876443221
Q ss_pred ----------------CcchhHHHHHHHHHHhhCCCcEEEEEEcCCCCCCCcccccccCChhHHHHHHHHHHHHHHHcC-
Q 043488 69 ----------------PSDEKQFSNFTDTVKIKNPSITTLLSIGGGNNPNYSSYSSMAGNPSFRKYFIDSSIKIARLYG- 131 (409)
Q Consensus 69 ----------------~~~~~~~~~~~~~lk~~~p~~kvllsiGG~~~~~~~~~~~~~~~~~~r~~fi~sii~~l~~~~- 131 (409)
+.....+..+. .+|+++|++|||+|||||+. ++.|+.++.++++|++|++++++++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~lK~~~p~lKvllSiGGw~~--s~~F~~~a~~~~~R~~Fi~s~v~~~~~~~l 159 (374)
T d1kfwa1 83 GYAADKSVSGKADTWDQPLAGSFNQLK-QLKAKNPKLKVMISLGGWTW--SKNFSKAAATEASRQKLVSSCIDLYIKGNL 159 (374)
T ss_dssp CCCTTTSSSSSCCCTTCSCCHHHHHHH-HHHTTCTTCEEEEEEECSSS--CTTHHHHTSSHHHHHHHHHHHHHHHTSCCE
T ss_pred ccccccccccccccccccchhhHHHHH-HHHhhCCCCeEEEEEeCCCC--CCccchhhcCHHHHHHHHHHHHHHHHHcCC
Confidence 11234567775 69999999999999999997 78899999999999999999999999999
Q ss_pred ---------------CCeEEEeeeccCC-----------cccHhhHHHHHHHHHHHHHHHhhcCCCCceeEEEEEeecCc
Q 043488 132 ---------------FQGLDLSWNQANT-----------SRDKYNIGILFKEWRAAVALEARNNSSQSQLILTAKVAYSP 185 (409)
Q Consensus 132 ---------------~DGIdiDwE~p~~-----------~~~~~~~~~ll~~Lr~~l~~~~~~~~~~~~~~Ls~a~~~~~ 185 (409)
|||||||||||+. ++|+++|+.||++||++|+..++ ..++ .++||+++++.+
T Consensus 160 ~~~~~~~~~~~~~~~FDGiDiDWEyP~~~~~~~~~~~~~~~D~~nf~~Ll~eLR~~ld~~~~-~~~k-~~~Ls~A~~~~~ 237 (374)
T d1kfwa1 160 PNFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGS-TNNK-KYVLSAFLPANP 237 (374)
T ss_dssp EEETTEEETTTTTTTCCEEEEECSCTTSSCSSTTCCCCTTTHHHHHHHHHHHHHHHHHHHHH-HTTC-CCEEEEEECSSH
T ss_pred cccccccccccccccccccceeeeecccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHhc-ccCc-eEEEEEEecccc
Confidence 7999999999963 46889999999999999998764 4444 489999999766
Q ss_pred cccc-CCCChhHHhccccEEEeeccCCCCCCCCCCCCCCCcCCCCC-------CCCcHHHHHHHHHHcCCCCCceEEecc
Q 043488 186 LSTA-AAYPVDSIRQYLNWVHVITTEYSSPTWQNFTGAHAALYDPN-------SVSNTEYGITEWIEEGLSADKLVLCLP 257 (409)
Q Consensus 186 ~~~~-~~y~~~~l~~~vD~v~vm~YD~~~~~~~~~~~~~apl~~~~-------~~~~~~~~v~~~~~~g~p~~KivlGlp 257 (409)
.... ..|+..++.++|||||||+|||||+|....++|+||||... ..++++.+|++|++.|+|++||+||||
T Consensus 238 ~~~~~~~~d~~~i~~~vD~invMtYD~~G~w~~~~tg~~apLy~~~~~~~~~~~~~svd~aV~~~~~~Gvp~~KlvlGip 317 (374)
T d1kfwa1 238 ADIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLGLA 317 (374)
T ss_dssp HHHHHHTTTCGGGGGTCSEEEECCSCSSCTTSTTBCCCSSCSSCCTTCCSCGGGCCCHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred ccccccCcchhhhhceeEEEEEEecccccCCCCCCCCccCcCCCCCCCCCCCCCCeeHHHHHHHHHHCCCCHHHeEEEec
Confidence 5432 35888999999999999999999999888899999998532 146899999999999999999999974
Q ss_pred eeeEEeeeccCCCCCCCCCccCCCCCCCCcccHHHHHHhhhcCCCCeEEEEeccceeEEEEeCcEEEEECCHHHHHHHHH
Q 043488 258 FYGYAWTLVKPEDNGIGAAATGPALHDDGLVTYKEVKNHIKNYGPNVQVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVA 337 (409)
Q Consensus 258 ~yG~~~~~~~~~~~~~~~~~~g~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~ydd~~Sl~~K~~ 337 (409)
||+++|++.|++
T Consensus 318 --------------------------------------------------------------------yd~~~si~~K~~ 329 (374)
T d1kfwa1 318 --------------------------------------------------------------------ADNIATTKQKTD 329 (374)
T ss_dssp --------------------------------------------------------------------SCCHHHHHHHHH
T ss_pred --------------------------------------------------------------------CCCHHHHHHHHH
Confidence 678899999999
Q ss_pred HHHHcCCceEEEEeccCCCchhHHHHHHHhhhcccC
Q 043488 338 YAKEKKLRGYYVWEVSSDHYWMLSQAAAEEDKRNRQ 373 (409)
Q Consensus 338 ~~~~~glgGi~iW~l~~Dd~~~L~~a~~~~~~~~~~ 373 (409)
|++++||||+|+|++++|+.++|++|+.++++...+
T Consensus 330 y~~~~glgG~m~W~~~~D~~g~Ll~a~~~~l~~~~~ 365 (374)
T d1kfwa1 330 YIVSKGLGGGMWWELSGDRNGELVGAMSDKFRAAAP 365 (374)
T ss_dssp HHHHTTCCEEEEECGGGCTTCHHHHHHHHHHHHSSC
T ss_pred HHHhcCCceEEEEEccCCCCCcHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999876654
|
| >d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
|---|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} | Back information, alignment and structure |
|---|
| >d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} | Back information, alignment and structure |
|---|
| >d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} | Back information, alignment and structure |
|---|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} | Back information, alignment and structure |
|---|
| >d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
| >d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} | Back information, alignment and structure |
|---|
| >d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} | Back information, alignment and structure |
|---|
| >d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
| >d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
|---|
| >d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} | Back information, alignment and structure |
|---|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|