Citrus Sinensis ID: 043535
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 881 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LY77 | 1033 | Calcium-transporting ATPa | yes | no | 0.965 | 0.823 | 0.563 | 0.0 | |
| Q9LIK7 | 1017 | Putative calcium-transpor | no | no | 0.964 | 0.835 | 0.560 | 0.0 | |
| Q9LF79 | 1074 | Calcium-transporting ATPa | no | no | 0.961 | 0.788 | 0.466 | 0.0 | |
| Q9LU41 | 1086 | Calcium-transporting ATPa | no | no | 0.963 | 0.781 | 0.464 | 0.0 | |
| Q9SZR1 | 1069 | Calcium-transporting ATPa | no | no | 0.960 | 0.791 | 0.456 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.951 | 0.823 | 0.408 | 0.0 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.960 | 0.814 | 0.408 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.953 | 0.819 | 0.397 | 0.0 | |
| Q37145 | 1020 | Calcium-transporting ATPa | no | no | 0.952 | 0.822 | 0.401 | 0.0 | |
| Q2QMX9 | 1020 | Calcium-transporting ATPa | no | no | 0.944 | 0.815 | 0.410 | 0.0 |
| >sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/935 (56%), Positives = 676/935 (72%), Gaps = 84/935 (8%)
Query: 10 IDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKK 69
ID + L+EI+K K+L +Q GG VA +L+T+ GI G+E++ +RR+ LFGSNTY K
Sbjct: 88 IDQEQLVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDLFGSNTYHK 147
Query: 70 PPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYISVS 116
PP + FV + FK T+LIL VCAI SL FG+ ++F+AV + I VS
Sbjct: 148 PPPKGLLFFVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFVAVFLVIVVS 207
Query: 117 ASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIF 176
A S + Q ++F+K LSK+SN+I+V+V+R+ RRQ I + +VVVGDV+ LKIGDQ+PADG+F
Sbjct: 208 ALSNFRQERQFDK-LSKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQIPADGLF 266
Query: 177 LDGHSLQIQ------ESDHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR 230
L+GHSLQ+ ESDH +EV+ NPFL SGTK+VDG+ +ML +VGM+TTWGQ M
Sbjct: 267 LEGHSLQVDESSMTGESDH-LEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTTWGQTMS 325
Query: 231 QTSYNTSEWTLLKARVRKLTSLVDLIGLAIT-----------------------FSGLLM 267
+ ++SE T L+ R+ LTS + IGL + ++G
Sbjct: 326 SINQDSSERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTGNTEKEGKREYNGSKT 385
Query: 268 ILD--LNAVVN----------LIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMG 315
+D +N+VV + IPEGLPLAVT+T+AYSMKR+M D AMVRKLSACETMG
Sbjct: 386 PVDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLSACETMG 445
Query: 316 SATVICTDKTGTLTLNQMK-------GAADHSN----IAPKVVELIQQGFALNTTAGFYK 364
SATVICTDKTGTLTLN+MK + H + I+P V++L+ QG LNTT
Sbjct: 446 SATVICTDKTGTLTLNEMKVTKFWLGQESIHEDSTKMISPDVLDLLYQGTGLNTTGSVC- 504
Query: 365 RTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRK 424
S SG E SGS EKA+LSW +L + MDME ++Q +L+VE F+S +K+S V++R+
Sbjct: 505 -VSDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSSAKKRSGVLVRR 563
Query: 425 KADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFA 484
K+DNTVHVHWKGAAE++LAMCS YY ++G+V ++ A+ R + IIQGMAA SL+C+AFA
Sbjct: 564 KSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAFA 623
Query: 485 HKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAI 544
HK + + L E+ L L+G++G+KDPCRPG+ KAVE C+ AGV IKMITGDN+FTAKAI
Sbjct: 624 HK-IASNDSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAI 682
Query: 545 ATQCGILKP-------------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK 591
A +CGIL +FRNYT+EE+M+KV+KI VMAR+SP DKL MVKCL+LK
Sbjct: 683 AFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLK 742
Query: 592 GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCV 651
GHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDI+ILDDNFA+ T+L WGRCV
Sbjct: 743 GHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCV 802
Query: 652 YVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPT 711
Y NIQKFIQF LT++V++++ NF+AA+ G+ PLTAVQLLW+NLI+ TLGALAL TE+PT
Sbjct: 803 YNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPT 862
Query: 712 KELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNENVKDTMIFNT 771
EL+++ PV TE LITNVMWRNLL Q+ YQIAVLL L FKG S+ V + VKDT+IFNT
Sbjct: 863 NELLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKDTLIFNT 922
Query: 772 FVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWI 831
FVLCQVFNEFNAR++EKKNVFKG+H+N+ F+GII ITIVLQV+MVE LKKFADT LN
Sbjct: 923 FVLCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGW 982
Query: 832 QWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYLSN 865
QWG+CI +A++SWPIG+F K IPV LSY N
Sbjct: 983 QWGTCIALASLSWPIGFFTKFIPVSETPFLSYFKN 1017
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/933 (56%), Positives = 669/933 (71%), Gaps = 83/933 (8%)
Query: 10 IDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKK 69
ID +TL ++VK KN + L+ GG + +AL+++ GI+ ++ RR+ FGSNTY +
Sbjct: 83 IDTETLNDLVKNKNQEKLESLGGPNGLVSALKSNTRLGINEEGDEIQRRRSTFGSNTYTR 142
Query: 70 PPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYISVS 116
P++ F FVV+ FK T+LIL CA LSL FG+ ++F+AV + ++VS
Sbjct: 143 QPSKGLFHFVVEAFKDLTILILLGCATLSLGFGIKEHGLKEGWYDGGSIFVAVFLVVAVS 202
Query: 117 ASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIF 176
A S + QN++F+KL SKVS++I++DVVRN RRQ+I + ++VVGD++CL IGDQVPADG+F
Sbjct: 203 AVSNFRQNRQFDKL-SKVSSNIKIDVVRNGRRQEISIFDIVVGDIVCLNIGDQVPADGVF 261
Query: 177 LDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR 230
++GH L + ES DH VEV+ + N FL SGTK+ DG+G+M T+VGMNT WGQ+M
Sbjct: 262 VEGHLLHVDESSMTGESDH-VEVSLTGNTFLFSGTKIADGFGKMAVTSVGMNTAWGQMMS 320
Query: 231 QTSYNTSEWTLLKARVRKLTSLVD------------------LIGLAITFSG-------- 264
S +T+E T L++R+ KLTS + G SG
Sbjct: 321 HISRDTNEQTPLQSRLDKLTSSIGKVGLLVAFLVLLVLLIRYFTGTTKDESGNREYNGKT 380
Query: 265 ----------LLMILDLNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314
+ M+ ++ + IPEGLPLAVT+T+AYSMKR+M D+AMVRKLSACETM
Sbjct: 381 TKSDEIVNAVVKMVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAMVRKLSACETM 440
Query: 315 GSATVICTDKTGTLTLNQMK--------GAADHSNIAPKVVELIQQGFALNTTAGFYKRT 366
GSATVICTDKTGTLTLNQMK + S+++ +VVEL QG A+NTT +K
Sbjct: 441 GSATVICTDKTGTLTLNQMKVTDFWFGLESGKASSVSQRVVELFHQGVAMNTTGSVFKAK 500
Query: 367 SGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKA 426
+G+ E E SGS EKAILSW + + M ME++ + ++ VE FNS +K+S V+M+KK
Sbjct: 501 AGT--EYEFSGSPTEKAILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKG 558
Query: 427 DNTVH--VHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFA 484
NT + VHWKGAAE ILAMCS++ D SG V+ ++ + +FE+IIQ MAA SL+C+AFA
Sbjct: 559 VNTENNVVHWKGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFA 618
Query: 485 HKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAI 544
+ + ++L EE L LLG++GIKDPCRPG+KKAVEDCQ+AGVNIKMITGDNIFTA+AI
Sbjct: 619 YSEDNEDNKKLKEEKLSLLGIIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAI 678
Query: 545 ATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK 591
A +CGIL PE FRNYT+EE++EKVE+I VMAR+SP DKL MVKCLK
Sbjct: 679 AVECGILTPEDEMNSEAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKEL 738
Query: 592 GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCV 651
GHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDI+ILDDNFA+ T+L WGRCV
Sbjct: 739 GHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCV 798
Query: 652 YVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPT 711
Y NIQKFIQF LT++V++++ NF+AAV G PLTAVQLLW+NLI+ TLGALAL TE+PT
Sbjct: 799 YNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPT 858
Query: 712 KELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNENVKDTMIFNT 771
+LM+K P+ PLITN+MWRNLLAQAFYQI+VLL L F+G S+ V E VK+T+IFNT
Sbjct: 859 NDLMKKKPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTEKVKNTLIFNT 918
Query: 772 FVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWI 831
FVLCQVFNEFNAR LEKKNVFKG+HKN+ F+GII +T+VLQVVMVE LK+FADTE LN
Sbjct: 919 FVLCQVFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLG 978
Query: 832 QWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYL 863
QWG CI IAA SWPIGW VK +PVP + SYL
Sbjct: 979 QWGVCIAIAAASWPIGWLVKSVPVPERHFFSYL 1011
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/943 (46%), Positives = 595/943 (63%), Gaps = 96/943 (10%)
Query: 10 IDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKK 69
I P+ L+ + K N L+Q+GGT +A L+T+ GI G ++D +R+ ++GSNTY +
Sbjct: 116 ITPEQLVIMSKDHNSGALEQYGGTQGLANLLKTNPEKGISGDDDDLLKRKTIYGSNTYPR 175
Query: 70 PPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYISVS 116
+ F F+ D T++IL V A+ SLA G+ ++ AV + I V+
Sbjct: 176 KKGKGFLRFLWDACHDLTLIILMVAAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVT 235
Query: 117 ASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIF 176
A S Y Q+ +F+ L + N I ++V+R RR +I + ++VVGDVI L IG+QVPADG+
Sbjct: 236 AVSDYKQSLQFQNLNDEKRN-IHLEVLRGGRRVEISIYDIVVGDVIPLNIGNQVPADGVL 294
Query: 177 LDGHSLQIQESDHN-----VEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQ 231
+ GHSL + ES V +++++PFL+SG KV DG G ML T VG+NT WG +M
Sbjct: 295 ISGHSLALDESSMTGESKIVNKDANKDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLMAS 354
Query: 232 TSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL---------DLNA--------- 273
S + E T L+ R+ + + + IGLA+ + L+++L D N
Sbjct: 355 ISEDNGEETPLQVRLNGVATFIGSIGLAVAAAVLVILLTRYFTGHTKDNNGGPQFVKGKT 414
Query: 274 ----VVNLII--------------PEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMG 315
V++ ++ PEGLPLAVT+T+AYSM+++M D A+VR+LSACETMG
Sbjct: 415 KVGHVIDDVVKVLTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMG 474
Query: 316 SATVICTDKTGTLTLNQMK--------GAADHSNIAPKVVELIQQGFALNTTAGFYKRTS 367
SAT IC+DKTGTLTLNQM D + + L+ +G + NTT +
Sbjct: 475 SATTICSDKTGTLTLNQMTVVESYAGGKKTDTEQLPATITSLVVEGISQNTTGSIFVPEG 534
Query: 368 GSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKAD 427
G ++E SGS EKAIL W + + M+ E R IL FNS +K+ V + K AD
Sbjct: 535 GG--DLEYSGSPTEKAILGWGV-KLGMNFETARSQSSILHAFPFNSEKKRGGVAV-KTAD 590
Query: 428 NTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHK- 486
VHVHWKGA+EI+LA C SY D GNV + F+ I MA +L+C+A A +
Sbjct: 591 GEVHVHWKGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRT 650
Query: 487 ----QVPVPEE----ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNI 538
+VP EE L E++LILL ++GIKDPCRPG+K +V CQ AGV ++M+TGDN+
Sbjct: 651 YEAEKVPTGEELSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNV 710
Query: 539 FTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDDKLAMV 585
TA+AIA +CGIL + FR T+ E+ + +KI VM R+SP+DKL +V
Sbjct: 711 QTARAIALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLV 770
Query: 586 KCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL 645
+ L+ +GHVVAVTG+G DAPAL EA++GL+MGI GT VAKESSDIIILDDNFA+ V ++
Sbjct: 771 QSLRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVV 830
Query: 646 NWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALAL 705
WGR VY NIQKFIQF LT++V++++ N +AA+ G PLTAVQLLW+NLI+ TLGALAL
Sbjct: 831 RWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALAL 890
Query: 706 VTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE---- 761
TE PT LM +PPV EPLITN+MWRNLL QA YQ++VLLTL F+G S+LG+
Sbjct: 891 ATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHE 950
Query: 762 ---NVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEI 818
VK+T+IFN FVLCQ FNEFNARK ++KN+FKG+ KN+ F+GII IT+VLQV++VE
Sbjct: 951 HATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEF 1010
Query: 819 LKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLS 861
L KFA T LNW QW C+GI ISWP+ K IPVPA +S
Sbjct: 1011 LGKFASTTKLNWKQWLICVGIGVISWPLALVGKFIPVPAAPIS 1053
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/956 (46%), Positives = 602/956 (62%), Gaps = 107/956 (11%)
Query: 4 SLAKTDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFG 63
S DID + L+ + + +N+ LQQ+GG VA L++++ GI+ E++ R+ FG
Sbjct: 124 STGNFDIDLEKLVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINEDEKEVIDRKNAFG 183
Query: 64 SNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVS 110
SNTY K ++FF F+ + ++ T++IL + A+ SLA G+ ++ AV
Sbjct: 184 SNTYPKKKGKNFFMFLWEAWQDLTLIILIIAAVTSLALGIKTEGLKEGWLDGGSIAFAVL 243
Query: 111 IYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQV 170
+ I V+A S Y Q+ +F+ L + N IQ++V+R R +I + +VVVGDVI L+IGDQV
Sbjct: 244 LVIVVTAVSDYRQSLQFQNLNDEKRN-IQLEVMRGGRTVKISIYDVVVGDVIPLRIGDQV 302
Query: 171 PADGIFLDGHSLQIQESDHNVE---VNSSQ-NPFLLSGTKVVDGYGRMLATAVGMNTTWG 226
PADG+ + GHSL I ES E V+ Q +PFL+SG KV DG G ML T VG+NT WG
Sbjct: 303 PADGVLISGHSLAIDESSMTGESKIVHKDQKSPFLMSGCKVADGVGNMLVTGVGINTEWG 362
Query: 227 QIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAIT-----------FSGLLMILDLNAVV 275
+M S +T E T L+ R+ L + + ++GL++ F+G D N
Sbjct: 363 LLMASISEDTGEETPLQVRLNGLATFIGIVGLSVALVVLVALLVRYFTGTTQ--DTNGAT 420
Query: 276 NLI---------------------------IPEGLPLAVTVTIAYSMKRLMIDHAMVRKL 308
I +PEGLPLAVT+T+AYSM+++M D A+VR+L
Sbjct: 421 QFIKGTTSISDIVDDCVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRL 480
Query: 309 SACETMGSATVICTDKTGTLTLNQMK-----------GAADH-SNIAPKVVELIQQGFAL 356
SACETMGSAT IC+DKTGTLTLNQM AD+ S + PK+V LI +G A
Sbjct: 481 SACETMGSATTICSDKTGTLTLNQMTVVETYAGGSKMDVADNPSGLHPKLVALISEGVAQ 540
Query: 357 NTTAGFYKRTSGSGLEIELSGSSIEKAILSWPI-LGMSMDMEQIRQSCVILQVEAFNSHR 415
NTT + G E+E+SGS EKAILSW LGM D IR I+ FNS +
Sbjct: 541 NTTGNIFHPKDGG--EVEISGSPTEKAILSWAYKLGMKFDT--IRSESAIIHAFPFNSEK 596
Query: 416 KQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAA 475
K+ V + + D+ V +HWKGAAEI+LA C+ Y D++G ++ +E +E F I MA
Sbjct: 597 KRGGVAVLR-GDSEVFIHWKGAAEIVLACCTQYMDSNGTLQSIE-SQKEFFRVAIDSMAK 654
Query: 476 GSLQCLAFAHK-----QVPVPEEELN-----EENLILLGLLGIKDPCRPGLKKAVEDCQY 525
SL+C+A A + QVP +E+L+ E+ LILL ++GIKDPCRPG+++AV C
Sbjct: 655 NSLRCVAIACRTQELNQVPKEQEDLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTS 714
Query: 526 AGVNIKMITGDNIFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYV 572
AGV ++M+TGDN+ TAKAIA +CGIL + FR +E+E+ + +KI V
Sbjct: 715 AGVKVRMVTGDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKEREQVAKKITV 774
Query: 573 MARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDII 632
M R+SP+DKL +V+ L+ G VVAVTG+G DAPAL EA++GLSMGI GT VAKESSDII
Sbjct: 775 MGRSSPNDKLLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDII 834
Query: 633 ILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLW 692
ILDDNFA+ V ++ WGR VY NIQKFIQF LT++V++++ N +AA+ G PL AVQLLW
Sbjct: 835 ILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLW 894
Query: 693 MNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFK 752
+NLI+ TLGALAL TE PT LM + PV EPLITN+MWRNLL Q+FYQ+AVLL L F
Sbjct: 895 VNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFA 954
Query: 753 GESVLGVN-EN------VKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGII 805
G S+LG+N EN VK+TMIFN FV+CQ+FNEFNARK ++ NVF+G++KN F+ I+
Sbjct: 955 GLSILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAIV 1014
Query: 806 GITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLS 861
G+T +LQ+++V L KFA T L W W + I I +SWP+ K IPVP +S
Sbjct: 1015 GVTFILQIIIVTFLGKFAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPVPKTPMS 1070
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/946 (45%), Positives = 598/946 (63%), Gaps = 100/946 (10%)
Query: 10 IDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKK 69
I + ++ I + +N+ LQ+ GG ++ L+T++ GI G ++D +R+ FGSNTY +
Sbjct: 116 IGQEQIVSISRDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQ 175
Query: 70 PPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYISVS 116
SF+ FV + + T++IL V A+ SLA G+ ++ AV + I V+
Sbjct: 176 KKGRSFWRFVWEASQDLTLIILIVAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVT 235
Query: 117 ASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIF 176
A+S Y Q+ +F+ L + N I+++V R+ RR +I + ++VVGDVI L IGDQVPADG+
Sbjct: 236 ATSDYRQSLQFQNLNEEKRN-IRLEVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVL 294
Query: 177 LDGHSLQIQESDHN-----VEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQ 231
+ GHSL + ES V+ NS+++PFL+SG KV DG G ML T VG+NT WG +M
Sbjct: 295 VAGHSLAVDESSMTGESKIVQKNSTKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMAS 354
Query: 232 TSYNTSEWTLLKARVRKLTSLVDLIGLAIT-----------FSG---------------- 264
S + T L+ R+ + + + ++GL + F+G
Sbjct: 355 VSEDNGGETPLQVRLNGVATFIGIVGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKT 414
Query: 265 -LLMILD--------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMG 315
+LD +V + +PEGLPLAVT+T+AYSM+++M D A+VR+LSACETMG
Sbjct: 415 KFEHVLDDLVEIFTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMG 474
Query: 316 SATVICTDKTGTLTLNQMK-----------GAADHSNIAPKV-VELIQQGFALNTTAGFY 363
SAT IC+DKTGTLTLN+M + D S+ P ++ +G A NTT +
Sbjct: 475 SATTICSDKTGTLTLNEMTVVECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSVF 534
Query: 364 KRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMR 423
+ SG EI++SGS E+AIL+W I + MD + ++ +Q FNS +K+ V +
Sbjct: 535 RSESG---EIQVSGSPTERAILNWAI-KLGMDFDALKSESSAVQFFPFNSEKKRGGVAV- 589
Query: 424 KKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAF 483
K D++VH+HWKGAAEI+L C+ Y D S + + + I MAA SL+C+A
Sbjct: 590 KSPDSSVHIHWKGAAEIVLGSCTHYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAI 649
Query: 484 AHK-----QVPVPEE-----ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMI 533
A + ++P EE EL E++LILL ++GIKDPCRPG+K +V CQ AGV ++M+
Sbjct: 650 AFRTFEADKIPTDEEQLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMV 709
Query: 534 TGDNIFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDD 580
TGDNI TAKAIA +CGIL + FR+Y+EEE+ E+I VM R+SP+D
Sbjct: 710 TGDNIQTAKAIALECGILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPND 769
Query: 581 KLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT 640
KL +V+ LK +GHVVAVTG+G DAPAL EA++GL+MGIQGT VAKE SDIIILDDNF +
Sbjct: 770 KLLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFES 829
Query: 641 AVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTL 700
V ++ WGR VY NIQKFIQF LT++V++++ N +AA+ G+ PLTAVQLLW+NLI+ TL
Sbjct: 830 VVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTL 889
Query: 701 GALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVN 760
GALAL TE PT LM++ PV EPLITN+MWRNL QA YQ+ VLL L F+G S+L +
Sbjct: 890 GALALATEPPTDHLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLK 949
Query: 761 -----ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM 815
E VK+T+IFN FV+CQVFNEFNARK ++ N+F+G+ +N F+GII ITIVLQVV+
Sbjct: 950 SKPNAERVKNTVIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVI 1009
Query: 816 VEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLS 861
VE L FA T L+W W CIGI +ISWP+ K IPVP +S
Sbjct: 1010 VEFLGTFASTTKLDWEMWLVCIGIGSISWPLAVIGKLIPVPETPVS 1055
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/930 (40%), Positives = 555/930 (59%), Gaps = 92/930 (9%)
Query: 18 IVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFS 77
I + + L+ GG ++ +++ GI S+ D RQ ++G N Y + P+ SF+
Sbjct: 86 ITSKHDSKALKMHGGVDGISKKVRSSFDHGICASDLDT--RQNIYGVNRYAEKPSRSFWM 143
Query: 78 FVVDTFKSFTVLILFVCAILSLAFGL-----------NLFIAVSIY--ISVSASSKYMQN 124
FV D F+ T++IL VCA+LS+A GL L I +SI+ + V+A S Y Q+
Sbjct: 144 FVWDAFQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQS 203
Query: 125 KKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQI 184
+F++L ++ I + V R+ RRQ+I + ++VVGD++ L IGDQVPADG+++ G+SL I
Sbjct: 204 LQFKELDNE-KKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLI 262
Query: 185 QESDHNVEVN----SSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWT 240
ES + E + S PF+L+GTKV DG +M+ TAVGM T WG++M S + T
Sbjct: 263 DESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDET 322
Query: 241 LLKARVRKLTSLVDLIGLA---ITFSGLLM--ILDLNAVVNLI----------------- 278
L+ ++ + +++ IGL +TF LL+ ++D V L+
Sbjct: 323 PLQVKLNGVATVIGKIGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATA 382
Query: 279 -------IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLN 331
+PEGLPLAVT+++A++MK+LM D A+VR LSACETMGSA ICTDKTGTLT N
Sbjct: 383 VTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTN 442
Query: 332 QM-----------KGAADH-------SNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEI 373
M K + S ++ + + L+ QG NT+A K G +
Sbjct: 443 YMVVDKIWISEVSKSVTSNTISGELNSVVSSRTLSLLLQGIFENTSAEVVKEKDGKQTVL 502
Query: 374 ELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVH 433
G+ E+AIL + LG+ + +C ++VE FNS +K+ V++ + +
Sbjct: 503 ---GTPTERAILEFG-LGLEGVHDAEYSACTKVKVEPFNSVKKKMAVLISLPSGTS---R 555
Query: 434 W--KGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVP 491
W KGA+EIIL MC D GN L R+ I A+ +L+ L A+K+V
Sbjct: 556 WFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDD 615
Query: 492 EEELN---EENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQC 548
++ L+ + GIKDP RPG+K AV+ C AG+ ++M+TGDNI TAKAIA +C
Sbjct: 616 IDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKEC 675
Query: 549 GILK--------PEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLK-LKGHVVAVTG 599
GIL PEF + + EE + + I VMAR+ P DK +V L+ + VV+VTG
Sbjct: 676 GILTEDGVAIEGPEFHSKSPEEMRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTG 735
Query: 600 NGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFI 659
+G DAPAL EA++GL+MGI GT VAKES+D+I+LDDNF T + + WGR VY+NIQKF+
Sbjct: 736 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFV 795
Query: 660 QFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPP 719
QF LT+++ +++ NF++A + G PLTAVQLLW+N+I+ TLGALAL TE P E+M++PP
Sbjct: 796 QFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPP 855
Query: 720 VRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGV----NENVKDTMIFNTFVLC 775
VR E IT VMWRN++ Q+ YQ+ VL L+F GES+L + ++++ +T+IFN+FV C
Sbjct: 856 VRKGESFITKVMWRNIMGQSLYQLFVLGALMFGGESLLNIKGADSKSIINTLIFNSFVFC 915
Query: 776 QVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGS 835
QVFNE N+R+++K NVF+GI N F+ +I T+ QVV++E L FA T LNW W
Sbjct: 916 QVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLL 975
Query: 836 CIGIAAISWPIGWFVKCIPVPAKSLSYLSN 865
+G+ +IS +G +KCIPV + S N
Sbjct: 976 SVGLGSISLIVGVILKCIPVGSGETSATPN 1005
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/938 (40%), Positives = 556/938 (59%), Gaps = 92/938 (9%)
Query: 10 IDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKK 69
I+P L I + + L+ GG ++ +++ GI SE D RQ ++G N Y +
Sbjct: 100 INPDELALITSKHDSKALKMHGGVDGISIKVRSSFDHGIYASELDT--RQNIYGVNRYAE 157
Query: 70 PPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-----------NLFIAVSIY--ISVS 116
P+ SF+ FV D + T++IL VCA+LS+A GL L I +SI+ + V+
Sbjct: 158 KPSRSFWMFVWDALQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVT 217
Query: 117 ASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIF 176
A S Y Q+ +F++L ++ I + V R+ RRQ+I + ++VVGD++ L IGDQVPADG++
Sbjct: 218 AVSDYKQSLQFKELDNE-KKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLY 276
Query: 177 LDGHSLQIQESDHNVEVN----SSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQT 232
+ G+SL I ES + E + S PF+L+GTKV DG +M+ TAVGM T WG++M
Sbjct: 277 IHGYSLLIDESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTL 336
Query: 233 SYNTSEWTLLKARVRKLTSLVDLIGLA---ITFSGLLM--ILDLNAVVNLI--------- 278
S + T L+ ++ + +++ IGL +TF LL+ ++D V L+
Sbjct: 337 SEGGEDETPLQVKLNGVATIIGKIGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALT 396
Query: 279 ---------------IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTD 323
+PEGLPLAVT+++A++MK+LM D A+VR LSACETMGSA ICTD
Sbjct: 397 IVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTD 456
Query: 324 KTGTLTLNQMKGAADH---SNIAPKVVE-----------------LIQQGFALNTTAGFY 363
KTGTLT N M D S ++ V L+ QG NT+A
Sbjct: 457 KTGTLTTNHM--VVDKIWISEVSKSVTSNTISGELNSVVSSSTLSLLLQGIFENTSAEVV 514
Query: 364 KRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMR 423
K G + G+ E+AIL + LG+ D + ++C ++VE FNS +K+ V++
Sbjct: 515 KEKDGKQTVL---GTPTERAILEFG-LGLKGDHDAEYRACTKVKVEPFNSVKKKMAVLI- 569
Query: 424 KKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAF 483
+ T KGA+EIIL MC D GN L R+ I A+ +L+ L
Sbjct: 570 SLPNGTSRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDALRTLCL 629
Query: 484 AHKQVPVPEEELN---EENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFT 540
A+K+V ++ L+ + GIKDP RPG+K AV+ C AG+ ++M+TGDNI T
Sbjct: 630 AYKEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNINT 689
Query: 541 AKAIATQCGILK--------PEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLK-LK 591
AKAIA +CGIL PEF + + EE + + I VMAR+ P DK +V L+ +
Sbjct: 690 AKAIAKECGILTEDGVAIEGPEFHSKSTEEMRDLILNIQVMARSLPLDKHTLVTNLRGMF 749
Query: 592 GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCV 651
VV+VTG+G DAPAL EA++GL+MGI GT VAKES+D+I+LDDNF T + + WGR V
Sbjct: 750 DEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAV 809
Query: 652 YVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPT 711
Y+NIQKF+QF LT+++ +++ NF++A ++G PLTAVQLLW+N+I+ TLGALAL TE P
Sbjct: 810 YINIQKFVQFQLTVNIVALVINFVSACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPN 869
Query: 712 KELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGV----NENVKDTM 767
E+M++PPVR E IT MWRN++ Q+ YQ+ VL L+F GE +L + ++++ +T+
Sbjct: 870 DEMMKRPPVRKGESFITKFMWRNIMGQSLYQLFVLGALMFGGERLLNIKGADSKSIINTL 929
Query: 768 IFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEG 827
IFN+FV CQVFNE N+R+++K NVF+GI N F+ +I T+ QVV++E L FA T
Sbjct: 930 IFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQVVIIEFLGTFASTVP 989
Query: 828 LNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLSYLSN 865
LNW W +G+ +IS +G +KCIPV + S N
Sbjct: 990 LNWQHWLLSVGLGSISLIVGVILKCIPVGSGETSATPN 1027
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/921 (39%), Positives = 544/921 (59%), Gaps = 81/921 (8%)
Query: 10 IDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKK 69
++ L +V+ + L + GG +A + + G+ SE R+ ++G N Y +
Sbjct: 95 VEADELASMVRNHDTKSLTKIGGPEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTE 152
Query: 70 PPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYISVS 116
P SF +FV + + T++IL VCA++S+ G+ + +++ + + V+
Sbjct: 153 KPARSFLTFVWEALQDITLIILMVCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVT 212
Query: 117 ASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIF 176
A S Y Q+ +F L + I + V R+ RQ++ + ++VVGDV+ L IGDQVPADGIF
Sbjct: 213 AISDYKQSLQFRDL-DREKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIF 271
Query: 177 LDGHSLQIQESDHNVEVNSS----QNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQT 232
+ G++L+I ES + E S + PFLLSGTKV +G +ML T VGM T WG++M
Sbjct: 272 ISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTL 331
Query: 233 SYNTSEWTLLKARVRKLTSLVDLIGLA---ITFSGL----------------------LM 267
S + T L+ ++ + +++ IGL +TF L L
Sbjct: 332 SEGGEDETPLQVKLNGVATIIGKIGLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALT 391
Query: 268 ILDLNAVVNLII----PEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTD 323
+LD A+ II PEGLPLAVT+++A++MK+LM D A+VR L+ACETMGS+T ICTD
Sbjct: 392 LLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTD 451
Query: 324 KTGTLTLNQM-----------KGAADHS---NIAPKVVELIQQGFALNTTAGFYKRTSGS 369
KTGTLT N M K + + N++ +V ++ Q NT + K G
Sbjct: 452 KTGTLTTNHMVVNKVWICENIKERQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEG- 510
Query: 370 GLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNT 429
+ ++ GS E+AIL + +L + D++ R+ IL++E FNS +K+ V+ +
Sbjct: 511 --KTQILGSPTERAILEFGLL-LGGDVDTQRREHKILKIEPFNSDKKKMSVLT-SHSGGK 566
Query: 430 VHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQV- 488
V KGA+EI+L MC D++G L +I+G A+ +L+ L + +
Sbjct: 567 VRAFCKGASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDLD 626
Query: 489 PVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQC 548
P +L L+ ++GIKDP RPG+++AV+ CQ AG+ ++M+TGDNI TAKAIA +C
Sbjct: 627 EAPRGDLPNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKEC 686
Query: 549 GILKP--------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGN 600
GIL +FRN E + KI VMAR+ P DK +V L+ G VVAVTG+
Sbjct: 687 GILTAGGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTGD 746
Query: 601 GIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQ 660
G DAPAL EA++GL+MGI GT VAKE++D+II+DDNFAT V + WGR VY+NIQKF+Q
Sbjct: 747 GTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQ 806
Query: 661 FHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPV 720
F LT++V +++ NF++A + G PLTAVQLLW+N+I+ TLGALAL TE P + LM++ P+
Sbjct: 807 FQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPI 866
Query: 721 RLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNEN----VKDTMIFNTFVLCQ 776
T IT MWRN++ Q+ YQ+ VL L F G+ +L +N V +T+IFN+FV CQ
Sbjct: 867 GRTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQ 926
Query: 777 VFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSC 836
VFNE N+R++EK NVF+G+ K+ F+ ++ T+ QV++VE L FA T L+W W C
Sbjct: 927 VFNEVNSREIEKINVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLC 986
Query: 837 IGIAAISWPIGWFVKCIPVPA 857
I I ++S + +KCIPV +
Sbjct: 987 ILIGSVSMILAVGLKCIPVES 1007
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/935 (40%), Positives = 556/935 (59%), Gaps = 96/935 (10%)
Query: 6 AKTDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSN 65
A +I P L IV+ +L L+ GGT + L T I GI SE+ + R+ ++G N
Sbjct: 94 AGFEICPDELGSIVEGHDLKKLKIHGGTEGLTEKLSTSIASGISTSEDLLSVRKEIYGIN 153
Query: 66 TYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG-------------LNLFIAVSIY 112
+ + P+ F+ FV + + T++IL CA +SL G L + ++ +
Sbjct: 154 QFTESPSRGFWLFVWEALQDTTLMILAACAFVSLIVGILMEGWPIGAHDGLGIVASILLV 213
Query: 113 ISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPA 172
+ V+A+S Y Q+ +F+ L ++ I V V R+K RQ+I + +++ GDV+ L IGDQ+PA
Sbjct: 214 VFVTATSDYRQSLQFKDLDAE-KKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPA 272
Query: 173 DGIFLDGHSLQIQESDHNVEVN----SSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQI 228
DG+F+ G S+ I ES E S ++PFLLSGTKV DG +ML T VGM T WG++
Sbjct: 273 DGLFISGFSVLINESSLTGESEPVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKL 332
Query: 229 MRQTSYNTSEWTLLKARVRKLTSLVDLIGL---AITFSGLLMIL---------------- 269
M S + T L+ ++ + +++ IGL ITF+ L+ L
Sbjct: 333 MATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLANQKRLDNSHWIWTAD 392
Query: 270 DLNAVVNLII----------PEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATV 319
+L A++ PEGLPLAVT+++A++MK++M D A+VR L+ACETMGSAT
Sbjct: 393 ELMAMLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATT 452
Query: 320 ICTDKTGTLTLNQMK-------------GAADH-----SNIAPKVVELIQQGFALNTTAG 361
IC+DKTGTLT N M D S I V+L+ Q NT
Sbjct: 453 ICSDKTGTLTTNHMTVVKACICEQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGG- 511
Query: 362 FYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVM 421
+ G G + E+ G+ E A+L + L + D +++RQ+ +++VE FNS +K+ V+
Sbjct: 512 --EIVVGKGNKTEILGTPTETALLEFG-LSLGGDFQEVRQASNVVKVEPFNSTKKRMGVV 568
Query: 422 MRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCL 481
+ + + H KGA+EI+L C Y + G V L+ + + II+ A+ +L+ L
Sbjct: 569 I-ELPERHFRAHCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTL 627
Query: 482 AFAHKQV--------PVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMI 533
A+ ++ P+P +G++GIKDP RPG+K++V C+ AG+ ++M+
Sbjct: 628 CLAYFEIGDEFSLEAPIPSG-----GYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMV 682
Query: 534 TGDNIFTAKAIATQCGILK--------PEFRNYTEEEKMEKVEKIYVMARASPDDKLAMV 585
TGDN+ TAKAIA +CGIL PEFR ++EE ++ + K+ VMAR+SP DK +V
Sbjct: 683 TGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLV 742
Query: 586 KCLK-LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTL 644
+ L+ + VVAVTG+G DAPAL EA++GL+MGI GT VAKES+D+IILDDNF+T VT+
Sbjct: 743 RLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTV 802
Query: 645 LNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALA 704
WGR VY+NIQKF+QF LT++V +++ NFL+A L G PLTAVQLLW+N+I+ TLGALA
Sbjct: 803 AKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALA 862
Query: 705 LVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNENVK 764
L TE P +LM++ PV I+NVMWRN+L Q+ YQ+ ++ L KG+++ G++
Sbjct: 863 LATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDS 922
Query: 765 D----TMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILK 820
D T+IFN FV CQVFNE ++R++EK +VFKGI KN F+ ++ T+V QV+++E+L
Sbjct: 923 DLTLNTLIFNIFVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLG 982
Query: 821 KFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855
FADT LN QW I + + P+ +K IPV
Sbjct: 983 TFADTTPLNLGQWLVSIILGFLGMPVAAALKMIPV 1017
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/918 (41%), Positives = 547/918 (59%), Gaps = 86/918 (9%)
Query: 18 IVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFS 77
IV+ + L GG +A L T G+ +EE RRQ ++G N + + SF+
Sbjct: 106 IVEGHDSKKLITHGGVTGIADKLATSPADGLSTAEESIKRRQDVYGLNKFTESEVRSFWV 165
Query: 78 FVVDTFKSFTVLILFVCAILSLAFG-------------LNLFIAVSIYISVSASSKYMQN 124
FV + + T++IL VCA +SL G L + ++ + + V+A+S Y Q+
Sbjct: 166 FVWEALQDTTLIILAVCAFVSLVVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQS 225
Query: 125 KKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQI 184
+F K L K IQV V RN RQ++ + +++ GDV+ L IGDQVPADG+F+ G SL I
Sbjct: 226 LQF-KDLDKEKKKIQVQVTRNGFRQRLSIYDLLPGDVVHLAIGDQVPADGLFISGFSLLI 284
Query: 185 QESDHNVE----VNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWT 240
ES E V + NPFLLSGTKV DG +ML T VGM T WG++M S + T
Sbjct: 285 NESSLTGESEPVVVNEDNPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMATLSEGGDDET 344
Query: 241 LLKARVRKLTSLVDLIGL---AITF-------------SGLLMILDLNAVVNLI------ 278
L+ ++ + +++ IGL ITF GLL+ + + ++
Sbjct: 345 PLQVKLNGVATIIGKIGLFFAVITFIVLSQGLISKKYHEGLLLSWSGDDALEMLEHFAIA 404
Query: 279 -------IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLN 331
+PEGLPLAVT+++A++MK++M D A+VR L+ACETMGSAT IC+DKTGTLT N
Sbjct: 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTN 464
Query: 332 QM-----------------KGAADHSNIAPK-VVELIQQGFALNTTAGFYKRTSGSGLEI 373
M K A+D + P+ VV+ + + NT G +
Sbjct: 465 HMTVVKACICGNIKEVNNPKNASDLCSELPETVVKTLLESIFNNTGGEVVIDQDG---KY 521
Query: 374 ELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVH 433
++ G+ E A+L + L + + + R I+++E FNS +K+ V++ K H
Sbjct: 522 QILGTPTETALLEFA-LSLGGNFKAKRDETKIVKMEPFNSTKKRMCVVL-KLPGGGCRAH 579
Query: 434 WKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVP-- 491
KGA+EI+LA C + D +G V L+ ++ II+ A +L+ L ++++
Sbjct: 580 CKGASEIVLAACDKFMDETGAVVPLDKTTADKLNGIIESFANEALRTLCLGYREMEEGFS 639
Query: 492 -EEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGI 550
EE++ + +G++GIKDP RPG++++V C+ AG+ ++M+TGDNI TAKAIA +CGI
Sbjct: 640 VEEQIPLQGYTCIGIVGIKDPVRPGVRESVATCRSAGIMVRMVTGDNINTAKAIARECGI 699
Query: 551 LK--------PEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK-GHVVAVTGNG 601
L PEFR + +E ++ + KI VMAR+SP DK +VK L+ VVAVTG+G
Sbjct: 700 LTEDGLAIEGPEFREKSLDELLKLIPKIQVMARSSPLDKHTLVKHLRTTFNEVVAVTGDG 759
Query: 602 IKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQF 661
DAPAL EA++GL+MGI GT VAKES+D+IILDDNF+T VT+ WGR VYVNIQKF+QF
Sbjct: 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQF 819
Query: 662 HLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVR 721
LT++V ++L NF +A G PLTAVQLLW+N+I+ TLGALAL TE P +LM++ PV
Sbjct: 820 QLTVNVVALLVNFSSACFTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKREPVG 879
Query: 722 LTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVN----ENVKDTMIFNTFVLCQV 777
T ITNVMWRN+L Q+FYQ V+ L +G+S+ G++ E V +T+IFN+FV CQV
Sbjct: 880 RTGKFITNVMWRNILGQSFYQFIVMWYLQTQGKSMFGLDGPDAEVVLNTIIFNSFVFCQV 939
Query: 778 FNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCI 837
FNE ++R++EK NV +GI KN FLG++ T+V Q +MV+ L +FA+T L +QW + +
Sbjct: 940 FNEISSREMEKINVLRGILKNYVFLGVLTSTVVFQFIMVQFLGEFANTIPLTRLQWIASV 999
Query: 838 GIAAISWPIGWFVKCIPV 855
+ I PI +K +PV
Sbjct: 1000 LLGLIGMPISAIIKLLPV 1017
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 881 | ||||||
| 225432828 | 1011 | PREDICTED: putative calcium-transporting | 0.970 | 0.845 | 0.631 | 0.0 | |
| 225432830 | 1011 | PREDICTED: putative calcium-transporting | 0.970 | 0.845 | 0.635 | 0.0 | |
| 225432838 | 1012 | PREDICTED: putative calcium-transporting | 0.970 | 0.844 | 0.636 | 0.0 | |
| 255552023 | 1013 | cation-transporting atpase plant, putati | 0.965 | 0.840 | 0.625 | 0.0 | |
| 225432836 | 1011 | PREDICTED: putative calcium-transporting | 0.970 | 0.845 | 0.625 | 0.0 | |
| 224102125 | 984 | autoinhibited calcium ATPase [Populus tr | 0.965 | 0.864 | 0.614 | 0.0 | |
| 225432840 | 1012 | PREDICTED: putative calcium-transporting | 0.970 | 0.844 | 0.633 | 0.0 | |
| 359477570 | 1009 | PREDICTED: putative calcium-transporting | 0.967 | 0.844 | 0.611 | 0.0 | |
| 225432816 | 1017 | PREDICTED: putative calcium-transporting | 0.967 | 0.837 | 0.622 | 0.0 | |
| 225432826 | 1007 | PREDICTED: putative calcium-transporting | 0.967 | 0.846 | 0.617 | 0.0 |
| >gi|225432828|ref|XP_002279593.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1173 bits (3034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/944 (63%), Positives = 719/944 (76%), Gaps = 89/944 (9%)
Query: 5 LAKTDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGS 64
+A ++ID +L +VK+KNLD L++ GG VA AL+TD GI G+ ED A RQ FGS
Sbjct: 70 VAFSNIDHTSLTAVVKEKNLDQLRELGGVEGVADALKTDTKNGIHGAVEDVAERQETFGS 129
Query: 65 NTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSI 111
NTY +PPT+SFF FV++ FK T+LIL CA LSL FG+ ++F+AV +
Sbjct: 130 NTYPRPPTKSFFYFVLEAFKDLTILILLACATLSLGFGIKEHGLKEGWYDGGSIFVAVFL 189
Query: 112 YISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVP 171
ISVSA S + QN++FEKL SKVSN+I+V+VVR+ RQ+I + +VVGDV+CLKIGDQVP
Sbjct: 190 VISVSAVSNFRQNRQFEKL-SKVSNNIEVEVVRDGHRQKISIFEIVVGDVVCLKIGDQVP 248
Query: 172 ADGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTW 225
ADG+FLDGHSLQ+ ES DH V+VNS+QNPFL SGTKV DGY +ML T+VGMNT W
Sbjct: 249 ADGLFLDGHSLQVDESSMTGESDH-VQVNSTQNPFLFSGTKVADGYAQMLVTSVGMNTIW 307
Query: 226 GQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL---------DLNA--- 273
G++M S N +E T L+AR+ KLTS + +GLAI F L++++ D N
Sbjct: 308 GEMMSTISRNINEQTPLQARLNKLTSSIGKVGLAIAFLVLVVLVVRYFTRNTEDENGNQE 367
Query: 274 ----------VVNLII--------------PEGLPLAVTVTIAYSMKRLMIDHAMVRKLS 309
+VN ++ PEGLPLAVT+T+AYSMK++M D AMVRKL
Sbjct: 368 FYGSKTKADDIVNAMVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLP 427
Query: 310 ACETMGSATVICTDKTGTLTLNQMK---------GAADHSNIAPKVVELIQQGFALNTTA 360
ACETMGSAT ICTDKTGTLTLNQMK D S+IA V++LIQQG ALNTT
Sbjct: 428 ACETMGSATTICTDKTGTLTLNQMKVTEYWLGKEPVEDSSSIASNVLKLIQQGVALNTTG 487
Query: 361 GFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRV 420
Y+ TSGS E E SGS EKAILSW +L + MDME+++Q+ IL VEAFNS +K+S +
Sbjct: 488 SIYRATSGS--EFEFSGSPTEKAILSWAVLELDMDMERLKQNHTILHVEAFNSEKKRSGI 545
Query: 421 MMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQC 480
+MRKKADN +HVHWKGAAE+ILAMCSSYYDASG++K L+ R FEQIIQGMAA SL+C
Sbjct: 546 LMRKKADNKMHVHWKGAAEMILAMCSSYYDASGSMKDLDDAERMTFEQIIQGMAASSLRC 605
Query: 481 LAFAHKQVPVPEEE-------LNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMI 533
+AFAHKQ+P E+E L E++L L+GL+GIKDPCRPG++KAVEDCQYAGVN+KMI
Sbjct: 606 IAFAHKQIPEEEQEISEGCQRLTEDSLTLIGLVGIKDPCRPGVRKAVEDCQYAGVNVKMI 665
Query: 534 TGDNIFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDD 580
TGDN+FTA+AIAT+CGIL+P+ FR YT EE+MEKV+KI VMAR+SP D
Sbjct: 666 TGDNVFTARAIATECGILRPDRDMNSEAVVEGEVFRKYTPEERMEKVDKICVMARSSPFD 725
Query: 581 KLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT 640
KL MV+CLKLKGHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDIIILDDNFA+
Sbjct: 726 KLLMVQCLKLKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFAS 785
Query: 641 AVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTL 700
T+L WGRCVY NIQKFIQF LT++V++++ NF+AAV G+ PLTAVQLLW+NLI+ TL
Sbjct: 786 VATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTL 845
Query: 701 GALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVN 760
GALAL TEQPT+ELMEKPPV TEPLI+N+MWRN+LAQA YQIAVLLTL F+GES+ GV+
Sbjct: 846 GALALATEQPTRELMEKPPVGRTEPLISNIMWRNILAQALYQIAVLLTLQFRGESIFGVS 905
Query: 761 ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILK 820
E VK+T+IFNTFVLCQVFNEFNARKLEKKNVFKG+HKNK FLGIIG+TI+LQVVMVE LK
Sbjct: 906 EKVKNTLIFNTFVLCQVFNEFNARKLEKKNVFKGLHKNKLFLGIIGMTIILQVVMVEFLK 965
Query: 821 KFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYL 863
KFADTE LNW QWG+CIGIAA SWPIGW VK IPV K LSYL
Sbjct: 966 KFADTERLNWGQWGACIGIAAASWPIGWVVKGIPVSDKPFLSYL 1009
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432830|ref|XP_002279629.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/944 (63%), Positives = 715/944 (75%), Gaps = 89/944 (9%)
Query: 5 LAKTDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGS 64
LA +ID +L +VK+KNLD L++ GG VA AL+TD GI G+ ED A RQ FGS
Sbjct: 70 LAFPNIDHTSLTAVVKEKNLDQLRKLGGVEGVADALKTDTKSGIHGAVEDVAERQETFGS 129
Query: 65 NTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSI 111
NTY +PPT+SFF FV++ FK T+LIL CA LSL FG+ ++F+AV +
Sbjct: 130 NTYPRPPTKSFFYFVLEAFKDLTILILLACATLSLGFGIKEHGPKEGWYDGGSIFVAVFL 189
Query: 112 YISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVP 171
ISVSA S + QN++FEKL SKVSN+I+V+VVR RQ+I + ++VVGDV CLKIGDQVP
Sbjct: 190 VISVSAVSNFRQNRQFEKL-SKVSNNIEVEVVRGGHRQKISIFDIVVGDVACLKIGDQVP 248
Query: 172 ADGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTW 225
ADG+FL GHSLQ+ ES DH VE+NSSQNPFL SGTKV DGY +ML T+VGMNTTW
Sbjct: 249 ADGLFLAGHSLQVDESSMTGESDH-VEINSSQNPFLFSGTKVADGYAQMLVTSVGMNTTW 307
Query: 226 GQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAIT------------------------ 261
G++M S + +E T L+AR+ KLTS + +GLA+
Sbjct: 308 GEMMSTISRDNNEQTPLQARLNKLTSSIGKVGLAVAFLVLLVLVVRYFTGNTEDENGNQE 367
Query: 262 FSGLLMILD--LNAVVNLII----------PEGLPLAVTVTIAYSMKRLMIDHAMVRKLS 309
F+G D +NA+V +I PEGLPLAVT+T+AYSMKR+M D AMVRKLS
Sbjct: 368 FNGSKTKADDIVNAMVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLS 427
Query: 310 ACETMGSATVICTDKTGTLTLNQMK---------GAADHSNIAPKVVELIQQGFALNTTA 360
ACETMGSAT ICTDKTGTLTLNQMK D S+IA V++LIQQG ALNTT
Sbjct: 428 ACETMGSATTICTDKTGTLTLNQMKVTKYWLGKEPVEDSSSIATNVLKLIQQGVALNTTG 487
Query: 361 GFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRV 420
Y+ TS S E E SGS EKA+LSW +L + MDME+++Q+ IL VEAFNS +K+S +
Sbjct: 488 SIYRATSKS--EFEFSGSPTEKALLSWAVLELDMDMERLKQNYTILHVEAFNSEKKRSGI 545
Query: 421 MMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQC 480
+MRKKADN +HVHWKGAAE+ILAMCSSYYDASG++K L+ G R FEQIIQGMAA SL+C
Sbjct: 546 LMRKKADNKIHVHWKGAAEMILAMCSSYYDASGSMKELDDGERMTFEQIIQGMAASSLRC 605
Query: 481 LAFAHKQVPVPEEE-------LNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMI 533
+AFAHKQ+P E+E L E++L L+GL+GIKDPCRPG++KAVEDCQYAGVN+KMI
Sbjct: 606 IAFAHKQIPEEEQEIREGRQKLKEDSLTLIGLVGIKDPCRPGVRKAVEDCQYAGVNVKMI 665
Query: 534 TGDNIFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDD 580
TGDN+FTA+AIAT+CGIL+P+ FR YT EE+MEKV+KI VMAR+SP D
Sbjct: 666 TGDNVFTARAIATECGILRPDQDINSEAVVEGEVFRKYTSEERMEKVDKICVMARSSPFD 725
Query: 581 KLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT 640
KL MV+CLK KGHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDIIILDDNFA+
Sbjct: 726 KLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFAS 785
Query: 641 AVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTL 700
T+L WGRCVY NIQKFIQF LT++V++++ NF+AAV G+ PLTAVQLLW+NLI+ TL
Sbjct: 786 VATVLRWGRCVYDNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTL 845
Query: 701 GALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVN 760
GALAL TEQPTKELMEKPPV EPLI+NVMWRNLLAQA YQIA+LLTL FKG+S+ GV+
Sbjct: 846 GALALATEQPTKELMEKPPVGRKEPLISNVMWRNLLAQALYQIAILLTLQFKGQSIFGVS 905
Query: 761 ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILK 820
E VKDT+IFNTFVLCQVFNEFNARKLEKKNVFKG+HKNK FLGIIGITI+LQVVMVE LK
Sbjct: 906 EKVKDTLIFNTFVLCQVFNEFNARKLEKKNVFKGLHKNKLFLGIIGITIILQVVMVEFLK 965
Query: 821 KFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYL 863
KFADTE L+W QWG+CIGIAA SWPIGW VKCIPV K LSYL
Sbjct: 966 KFADTERLDWGQWGACIGIAAASWPIGWVVKCIPVSDKPFLSYL 1009
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432838|ref|XP_002279864.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/943 (63%), Positives = 710/943 (75%), Gaps = 88/943 (9%)
Query: 6 AKTDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSN 65
A + ID TL EIVK+KNL LL + GG VA AL+TDI GI G+ +D A RQ FGSN
Sbjct: 71 AFSSIDQTTLTEIVKEKNLKLLLESGGVEGVADALETDIKNGISGAVDDVALRQEAFGSN 130
Query: 66 TYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIY 112
TYK+PPT+S F FVV+ FK T+LIL CA LSL FG+ ++F+AV +
Sbjct: 131 TYKRPPTKSLFHFVVEAFKDLTILILLFCAALSLGFGIKEHGLKEGWYDGGSIFVAVILV 190
Query: 113 ISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPA 172
ISVSA S + QN++FEKL SKVSN+I++DV RN RRQQI + +VVGDV+ LKIGDQVPA
Sbjct: 191 ISVSAVSNFRQNRQFEKL-SKVSNNIKIDVFRNGRRQQISIFEIVVGDVVSLKIGDQVPA 249
Query: 173 DGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWG 226
DG+FLDGHSLQ+ ES DH VEVNSS NPFL SGTKV DGY +ML T+VGMNTTWG
Sbjct: 250 DGLFLDGHSLQVDESSMTGESDH-VEVNSSHNPFLFSGTKVADGYAQMLVTSVGMNTTWG 308
Query: 227 QIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAIT------------------------F 262
Q+M S +T+E T L+AR+ KLTS + GLA+ F
Sbjct: 309 QMMSTISRDTNEQTPLQARLNKLTSSIGKAGLAVAFLVLLVLLVRYFTGNTEDENGNQEF 368
Query: 263 SGLLMILD--LNAVVNLI----------IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSA 310
+G D +NAVV +I IPEGLPLAVT+T+AYSMKR+M D AMVRKLSA
Sbjct: 369 NGSKTKADDIVNAVVEIIATAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSA 428
Query: 311 CETMGSATVICTDKTGTLTLNQMK------GAAD---HSNIAPKVVELIQQGFALNTTAG 361
CETMGSAT ICTDKTGTLT+NQMK G S+I+ ++ LIQQG ALNTT
Sbjct: 429 CETMGSATTICTDKTGTLTMNQMKVTKIWLGQEPIEVSSSISENLLNLIQQGVALNTTGS 488
Query: 362 FYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVM 421
Y+ TSGS + E GS EKAILSW +L + MDME ++Q+C IL VEAFNS +K+S V
Sbjct: 489 VYRATSGS-YKFEFFGSPTEKAILSWAVLELDMDMEILKQNCTILHVEAFNSEKKRSGVS 547
Query: 422 MRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCL 481
+R KADNT+HVHWKGAAE+ILAMCSSYYDASG++K L+ R+ FEQIIQGMAA SL+C+
Sbjct: 548 IRSKADNTIHVHWKGAAEMILAMCSSYYDASGSMKDLDDCERKTFEQIIQGMAASSLRCI 607
Query: 482 AFAHKQVPVPEEE-------LNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMIT 534
AFAHKQ+ E E L E+ L +GL+GIKDPCRPG++KAVEDCQ+AGVN+KMIT
Sbjct: 608 AFAHKQILEEEHEIREATQKLKEDGLAFVGLVGIKDPCRPGVRKAVEDCQHAGVNVKMIT 667
Query: 535 GDNIFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDDK 581
GDN+FTA+AIAT+CGIL+P+ FRNYT EE+MEKV+KI VMAR+SP DK
Sbjct: 668 GDNVFTARAIATECGILRPDQGINNEAVVEGEVFRNYTPEERMEKVDKIRVMARSSPFDK 727
Query: 582 LAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATA 641
L MV+CLK GHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDIIILDDNFA+
Sbjct: 728 LLMVQCLKQNGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASV 787
Query: 642 VTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLG 701
T+L WGRCVY NIQKFIQF LT++V++++ NF+AAV G+ PLTAVQLLW+NLI+ TLG
Sbjct: 788 ATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLG 847
Query: 702 ALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE 761
ALAL TEQPT ELM++PPV T PLITN+MWRNLLAQA YQIAVLLTL FKGES+ GV+E
Sbjct: 848 ALALATEQPTNELMDRPPVGRTGPLITNIMWRNLLAQAMYQIAVLLTLQFKGESIFGVSE 907
Query: 762 NVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKK 821
VKDT+IFNTFVLCQVFNEFNAR+LEKKNVF+GIHKNK FLGIIGITI+LQVVMVE LKK
Sbjct: 908 KVKDTLIFNTFVLCQVFNEFNARRLEKKNVFEGIHKNKLFLGIIGITIILQVVMVEFLKK 967
Query: 822 FADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYL 863
FADTE LNW QWG+C+GIAA+SWP+GW VKCIPV K LSYL
Sbjct: 968 FADTERLNWGQWGACLGIAAVSWPLGWVVKCIPVSNKPFLSYL 1010
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255552023|ref|XP_002517056.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223543691|gb|EEF45219.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/940 (62%), Positives = 704/940 (74%), Gaps = 89/940 (9%)
Query: 10 IDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKK 69
I+ L ++VK+K+ LQ+ GG VA+A++T+ GGI G ED ARRQ FGSNTYKK
Sbjct: 75 INHACLTDLVKEKSHQQLQKLGGVAGVASAVETNTEGGIFGGVEDIARRQEAFGSNTYKK 134
Query: 70 PPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYISVS 116
PPT+SFF FVV+ FK T+ IL CA LSL FG+ ++F+AV + I+VS
Sbjct: 135 PPTKSFFYFVVEAFKDLTIAILLGCAALSLGFGIKEHGLKEGWYDGGSIFVAVFLVIAVS 194
Query: 117 ASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIF 176
A S Y QN++F+KL SKVSN+IQ+DVVR RR Q+ + +VVGDV+CLKIGDQVPADG+F
Sbjct: 195 AVSNYRQNRQFDKL-SKVSNNIQIDVVRGGRRLQLSIFELVVGDVVCLKIGDQVPADGLF 253
Query: 177 LDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR 230
+DGHSLQI ES DH VEVNS QNPFL SGTKV DGYGRML T+VGMNTTWG++M
Sbjct: 254 IDGHSLQIDESSMTGESDH-VEVNSHQNPFLFSGTKVADGYGRMLVTSVGMNTTWGEMMS 312
Query: 231 QTSYNTSEWTLLKARVRKLTSLVDLIGLAIT-----------FSGLLMILDLNAVVN--- 276
S +T+E T L+AR+ KLTS + +GLA+ F+G + N N
Sbjct: 313 HISRDTNEQTPLQARLNKLTSSIGKVGLAVAFLVLVVLLVRYFTGNTQDENGNREFNGSS 372
Query: 277 ----------------------LIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314
+ IPEGLPLAVT+T+AYSMKR+M D AMVRKLSACETM
Sbjct: 373 TKADDIVNAVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETM 432
Query: 315 GSATVICTDKTGTLTLNQMK------GAADH---SNIAPKVVELIQQGFALNTTAGFYKR 365
GSAT ICTDKTGTLT+N MK G A+ S+I+P V++LI+QG ALNTT Y+
Sbjct: 433 GSATTICTDKTGTLTMNLMKVTKFWLGQAEQITSSSISPYVLDLIRQGVALNTTGSAYRA 492
Query: 366 TSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKK 425
+ S E E SGS EKAILSW IL + MDME+ +QSC ILQVEAFNS +K+S V +RKK
Sbjct: 493 HAQS--EFEFSGSPTEKAILSWAILDLEMDMEEQKQSCTILQVEAFNSQKKRSGVSIRKK 550
Query: 426 ADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAH 485
D+T+HV WKGAAE+ILAMC+SYYDA G VK L+ R F+QIIQ MAA SL+C+AFAH
Sbjct: 551 LDSTIHVQWKGAAEMILAMCTSYYDACGIVKELDDNERTVFKQIIQEMAAESLRCIAFAH 610
Query: 486 KQVP-------VPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNI 538
Q+ + +++L E L LLGL+GIKDPCRPG+KKAVEDCQ+AGV+IKMITGDN+
Sbjct: 611 AQISEEQYEAGIQDKKLKENGLTLLGLVGIKDPCRPGVKKAVEDCQHAGVSIKMITGDNV 670
Query: 539 FTAKAIATQCGILKP-------------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMV 585
FTA+AIA +CGILKP EFRNYT EE+MEKV++I VMAR+SP DKL MV
Sbjct: 671 FTARAIALECGILKPGQDMFSGAVVEGEEFRNYTHEERMEKVDQICVMARSSPFDKLLMV 730
Query: 586 KCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL 645
+CLK KG VVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDI+ILDDNFA+ T+L
Sbjct: 731 QCLKQKGQVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVL 790
Query: 646 NWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALAL 705
WGRCVY NIQKFIQF LT++V++++ NF+AAV G+ PLTAVQLLW+NLI+ TLGALAL
Sbjct: 791 RWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALAL 850
Query: 706 VTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNENVKD 765
TEQPTKELM+K PV TEPLITN+MW+NLLAQAFYQIAVLLTL FKG+S+ GV E VKD
Sbjct: 851 ATEQPTKELMDKKPVGRTEPLITNIMWKNLLAQAFYQIAVLLTLQFKGKSIFGVTEEVKD 910
Query: 766 TMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADT 825
T+IFNTFVLCQVFNEFNARKLEKKNVFKGIHKNK FLGIIG+TIVLQV+MVE LKKFADT
Sbjct: 911 TLIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKLFLGIIGVTIVLQVLMVEFLKKFADT 970
Query: 826 EGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYLS 864
E LNW QWG+CIG+A ++WPIGW VK IPVP K LSYL+
Sbjct: 971 ERLNWGQWGACIGMATLTWPIGWLVKFIPVPEKPILSYLT 1010
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432836|ref|XP_002279818.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/944 (62%), Positives = 712/944 (75%), Gaps = 89/944 (9%)
Query: 5 LAKTDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGS 64
LA +ID +L +VK+K+LD L++ GG VA AL+T GI G+ ED A RQ FGS
Sbjct: 70 LAFPNIDHTSLTAVVKEKSLDQLRELGGVEGVADALKTHTKNGIHGAVEDVAERQETFGS 129
Query: 65 NTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSI 111
NTY +PPT+SFF FV++ FK T+LIL CA LSL FG+ ++F+AV +
Sbjct: 130 NTYPRPPTKSFFYFVLEAFKDLTILILLACATLSLGFGIKEHGLKEGWYDGGSIFVAVFL 189
Query: 112 YISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVP 171
ISVSA S + QN++ E L SKVSN+I+V+VVR+ RQ+I + +VVGDV CLKIGDQVP
Sbjct: 190 VISVSAVSNFRQNRQLETL-SKVSNNIEVEVVRDGHRQKISIFGIVVGDVACLKIGDQVP 248
Query: 172 ADGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTW 225
ADG+FL GHSLQ+ ES DH VE+NSSQNPFL SGTKV DGY +ML T+VGMNTTW
Sbjct: 249 ADGLFLAGHSLQVDESSMTGESDH-VEINSSQNPFLFSGTKVADGYAQMLVTSVGMNTTW 307
Query: 226 GQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL---------DLNA--- 273
G++M S++ +E T L+AR+ KLTS + +GLA+ F L+M++ D N
Sbjct: 308 GEMMSTISHDNNEQTPLQARLNKLTSSIGKVGLAVAFLVLVMLVVRYFTGNTEDENGNQE 367
Query: 274 ----------VVNLII--------------PEGLPLAVTVTIAYSMKRLMIDHAMVRKLS 309
+VN ++ PEGLPLAVT+T+AYSMKR+M D AMVRKLS
Sbjct: 368 FNGSKTKADDIVNAMVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLS 427
Query: 310 ACETMGSATVICTDKTGTLTLNQMK---------GAADHSNIAPKVVELIQQGFALNTTA 360
ACETMGSAT ICTDKTGTLTLNQMK D S+IA +++LIQQG ALNTT
Sbjct: 428 ACETMGSATTICTDKTGTLTLNQMKVTKYWLGKEPVEDSSSIATNILKLIQQGVALNTTG 487
Query: 361 GFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRV 420
Y+ TS S E E SGS EKA+LSW +L + MDME+++Q+ IL VEAFNS +K+S +
Sbjct: 488 SIYRATSKS--EFEFSGSPTEKALLSWAVLELDMDMERLKQNYTILHVEAFNSEKKRSGI 545
Query: 421 MMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQC 480
+MRKKADN +HVHWKGAAE+ILAMCSSYYDASG++K L+ G R FEQIIQGMAA SL+C
Sbjct: 546 LMRKKADNKIHVHWKGAAEMILAMCSSYYDASGSMKELDDGERMTFEQIIQGMAASSLRC 605
Query: 481 LAFAHKQVPVP-------EEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMI 533
+AFAH+Q+P ++L E++L L+GL+GIKDPCRPG++KAVEDCQYAGVN+KMI
Sbjct: 606 IAFAHEQIPEEEQEIREGRQKLKEDSLTLIGLVGIKDPCRPGVRKAVEDCQYAGVNVKMI 665
Query: 534 TGDNIFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDD 580
TGDN+FTA+AIAT+CGIL+P+ FR YT EE+MEKV+KI VMAR+SP D
Sbjct: 666 TGDNVFTARAIATECGILRPDQDMNSEAVVEGEIFRKYTSEERMEKVDKICVMARSSPFD 725
Query: 581 KLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT 640
KL MV+CLK KGHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKE SDIIILDDNFA+
Sbjct: 726 KLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKEGSDIIILDDNFAS 785
Query: 641 AVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTL 700
T+L WGRCVY NIQKFIQF LT++V++++ NF+AAV G+ PLTAVQLLW+NLI+ TL
Sbjct: 786 VATVLRWGRCVYDNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTL 845
Query: 701 GALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVN 760
GALAL TEQPTKELMEKPP+ EPLI+NVMWRNLLAQA YQIA+LLTL FKG S+ GV+
Sbjct: 846 GALALATEQPTKELMEKPPMGRKEPLISNVMWRNLLAQALYQIAILLTLQFKGRSIFGVS 905
Query: 761 ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILK 820
E VKDT+IFNTFVLCQVFNEFNARKLEKKNVFKG+HKNK FLGIIGITI+LQVVMVE LK
Sbjct: 906 EKVKDTLIFNTFVLCQVFNEFNARKLEKKNVFKGLHKNKLFLGIIGITIILQVVMVEFLK 965
Query: 821 KFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYL 863
KFADTE L+W QWG+CIGIAA SWPIGW VKCIPV K LSYL
Sbjct: 966 KFADTERLDWGQWGACIGIAAASWPIGWVVKCIPVSDKPFLSYL 1009
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224102125|ref|XP_002312557.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222852377|gb|EEE89924.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/942 (61%), Positives = 703/942 (74%), Gaps = 91/942 (9%)
Query: 10 IDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKK 69
I +L E+VK+K+LD L+ FGG +A+A+ TDI GGI G ED RRQ FGSNTYKK
Sbjct: 44 IHQSSLSELVKKKDLDQLENFGGIVRIASAIGTDIDGGIYGGPEDIDRRQQAFGSNTYKK 103
Query: 70 PPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYISVS 116
PPT+ FF FVV+ FK T+ IL CA LSL FG+ ++F+AV + I+VS
Sbjct: 104 PPTKGFFHFVVEAFKDLTIAILLGCAALSLGFGIKEHGLKEGWYDGGSIFVAVFLIIAVS 163
Query: 117 ASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIF 176
A S Y QN++F+KL SK+SN+IQ+DVVR+ RRQ++ + +VVGDV+CLKIGDQVPADG+F
Sbjct: 164 AISNYRQNRQFDKL-SKISNNIQIDVVRSGRRQEVSIFELVVGDVVCLKIGDQVPADGLF 222
Query: 177 LDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR 230
+DGHSLQI ES DH VE+N +NPFL+SGTKV DGYG+ML T+VGMNTTWG++M
Sbjct: 223 IDGHSLQIDESSMTGESDH-VEINHKKNPFLVSGTKVADGYGQMLVTSVGMNTTWGEMMS 281
Query: 231 QTSYNTSEWTLLKARVRKLTSLVDLIGLAIT------------------------FSGLL 266
S +T+E T L+AR+ KLTS + +GLA+ F+G
Sbjct: 282 HISRDTNEQTPLQARLNKLTSSIGKVGLAVAFLVLLVLLVRYFTGNTQDESGKKEFNGSK 341
Query: 267 MILD------------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314
D ++ + IPEGLPLAVT+T+AYSMKR+M D AMVRKL ACETM
Sbjct: 342 TKADDIVNAVVGIVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDQAMVRKLPACETM 401
Query: 315 GSATVICTDKTGTLTLNQMK-----------GAADHSNIAPKVVELIQQGFALNTTAGFY 363
GSAT ICTDKTGTLT+N MK ++ S ++P V+ELI+QG ALNTT Y
Sbjct: 402 GSATTICTDKTGTLTMNLMKVTKFWLGQESMEQSNPSPVSPYVLELIKQGVALNTTGSVY 461
Query: 364 KRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMR 423
+ + S LE SGS EKAILSW +L ++M+MEQ++QSC ILQVEAFNS +K+S V+
Sbjct: 462 RESPESKLE--FSGSPTEKAILSWAVLELNMNMEQMKQSCTILQVEAFNSQKKRSGVLSM 519
Query: 424 KKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAF 483
KK D+T+HVHWKGAAE+ILAMCSSYYDASG +K ++ R F+QIIQ MAA SL+C+AF
Sbjct: 520 KKMDHTIHVHWKGAAEMILAMCSSYYDASGLMKEMDDRERNTFKQIIQDMAASSLRCIAF 579
Query: 484 AHKQVPVPEEE-------LNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGD 536
AHKQ+ + E L E+ L LLGL+GIKDPCRPG+KKAV+DCQ AGVN+KMITGD
Sbjct: 580 AHKQISEDQYEDGKEDKTLKEDCLTLLGLVGIKDPCRPGVKKAVDDCQRAGVNVKMITGD 639
Query: 537 NIFTAKAIATQCGILKP-------------EFRNYTEEEKMEKVEKIYVMARASPDDKLA 583
N+FTA+AIA +CGILKP EFRNYT E++MEKV+KI VMAR+SP DKL
Sbjct: 640 NVFTARAIAIECGILKPGAENISGAVVEGEEFRNYTHEQRMEKVDKICVMARSSPFDKLL 699
Query: 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVT 643
MV+CLK KGHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDI+ILDDNFA+ T
Sbjct: 700 MVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVAT 759
Query: 644 LLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGAL 703
+L WGRCVY NIQKFIQF LT++V++++ NF+AAV G+ PLTAVQLLW+NLI+ TLGAL
Sbjct: 760 VLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGAL 819
Query: 704 ALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNENV 763
AL TEQPT+ELMEK PV TEPLITN+MWRNLL+QA YQIA+LLTL FKGES+ GV E V
Sbjct: 820 ALATEQPTQELMEKTPVGRTEPLITNIMWRNLLSQALYQIAILLTLQFKGESIFGVTERV 879
Query: 764 KDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFA 823
DT+IFN FVLCQVFNEFNARKLE+KNVFKGIHKNK FLGIIGITI+LQV+MVE LKKFA
Sbjct: 880 NDTLIFNIFVLCQVFNEFNARKLEEKNVFKGIHKNKLFLGIIGITILLQVLMVEFLKKFA 939
Query: 824 DTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSL-SYLS 864
DTE LNW QWG+CIG AA+SWPI W VKCIPVP K + SYL+
Sbjct: 940 DTERLNWGQWGACIGTAALSWPICWVVKCIPVPEKPIFSYLT 981
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432840|ref|XP_002279888.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1130 bits (2922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/943 (63%), Positives = 707/943 (74%), Gaps = 88/943 (9%)
Query: 6 AKTDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSN 65
A + ID TL IVK KNL+LL + GG VA AL+TDI GI G+ +D A RQ FGSN
Sbjct: 71 AFSSIDQTTLNAIVKGKNLNLLLESGGVEGVADALETDIKNGISGAVDDVALRQEAFGSN 130
Query: 66 TYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIY 112
TYK+PP +S F FVV+ FK T+LIL CA LSL FG+ ++F+AV +
Sbjct: 131 TYKRPPAKSLFHFVVEAFKDVTILILLFCAALSLGFGIKEHGLKEGWYDGGSIFVAVILV 190
Query: 113 ISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPA 172
ISVSA S + QN++FEKL SKVSN+I+VDV RN RRQQI + +VVGDV+ LKIGDQVPA
Sbjct: 191 ISVSAVSNFRQNRQFEKL-SKVSNNIKVDVFRNGRRQQISIFEIVVGDVVSLKIGDQVPA 249
Query: 173 DGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWG 226
DG+FLDGHSLQ+ ES DH VEVNSS NPFL SGTKV DGY +ML T+VGMNTTWG
Sbjct: 250 DGLFLDGHSLQVDESSMTGESDH-VEVNSSHNPFLFSGTKVADGYAQMLVTSVGMNTTWG 308
Query: 227 QIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAIT-----------FSGLLMILDLNAVV 275
Q+M S +T+E T L+AR+ KLTS + GLA+ F+G + N
Sbjct: 309 QMMSTISRDTNEQTPLQARLNKLTSSIGKAGLAVAFLVLVVLLVRYFTGNTEDENGNQEF 368
Query: 276 N-------------------------LIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSA 310
N + IPEGLPLAVT+T+AYSMKR+M D AMVRKLSA
Sbjct: 369 NGSKTKADDIVNAVVAIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSA 428
Query: 311 CETMGSATVICTDKTGTLTLNQMK------GAAD---HSNIAPKVVELIQQGFALNTTAG 361
CETMGSAT ICTDKTGTLT+NQMK G S+I+ ++ LIQQG ALNTT
Sbjct: 429 CETMGSATTICTDKTGTLTMNQMKVTKIWLGQEPIEVSSSISTNLLNLIQQGVALNTTGS 488
Query: 362 FYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVM 421
YK +SGS + E SGS EKAILSW +L + MDME ++Q+C IL VEAFNS +K+S V+
Sbjct: 489 VYKASSGSS-KFEFSGSPTEKAILSWAVLELDMDMEILKQNCTILHVEAFNSEKKRSGVL 547
Query: 422 MRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCL 481
+R KAD+T++VHWKGAAE+ILAMCSSYYDASG+ K ++ G R FEQIIQGMAA SL+C+
Sbjct: 548 VRSKADDTINVHWKGAAEMILAMCSSYYDASGSTKDMDDGERMTFEQIIQGMAASSLRCI 607
Query: 482 AFAHKQVPVPEEE-------LNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMIT 534
AFAHKQ+P + E L E+ L L+GL+GIKDPCRPG++KAVEDCQYAGVN+KMIT
Sbjct: 608 AFAHKQIPEEKHEIREATQKLKEDGLTLIGLVGIKDPCRPGVRKAVEDCQYAGVNVKMIT 667
Query: 535 GDNIFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDDK 581
GDN+FTA+AIAT+CGIL+P+ FR YT EE+MEKV+KI VMAR+SP DK
Sbjct: 668 GDNVFTARAIATECGILRPDQGIDNEAVVEGEVFRKYTPEERMEKVDKIRVMARSSPFDK 727
Query: 582 LAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATA 641
L MV+CLK KGHVVAVTG+G DAPAL+EA++GLSMGIQGT VAK+SSDIIILDDNFA+
Sbjct: 728 LLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKQSSDIIILDDNFASV 787
Query: 642 VTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLG 701
T+L WGRCVY NIQKFIQF LT++V++++ NF+AAV G+ PLTAVQLLW+NLI+ TLG
Sbjct: 788 ATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLG 847
Query: 702 ALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE 761
ALAL TEQPTK LM++PPV TEPLITN+MWRNLLAQA YQIAVLLTL FKGES+ GVNE
Sbjct: 848 ALALSTEQPTKGLMDRPPVGRTEPLITNIMWRNLLAQALYQIAVLLTLQFKGESIFGVNE 907
Query: 762 NVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKK 821
VKDT+IFNTFVLCQVFNEFNARKLEKKNVF+GIHKNK FLGIIGITI+LQVVMVE LKK
Sbjct: 908 KVKDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNKLFLGIIGITIILQVVMVEFLKK 967
Query: 822 FADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYL 863
FADTE LNW QWG+C+GIAA+SWP+GW VKCI V K LSYL
Sbjct: 968 FADTERLNWGQWGACLGIAAVSWPLGWVVKCIHVSNKPFLSYL 1010
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477570|ref|XP_002279443.2| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1129 bits (2921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/940 (61%), Positives = 698/940 (74%), Gaps = 88/940 (9%)
Query: 8 TDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTY 67
+++D +L +VK+KNLD L FGG VA AL++D+ GI G+ +D A RQ FGSNTY
Sbjct: 72 SNVDQTSLTALVKEKNLDQLLGFGGVEGVAVALRSDVKNGIHGAAKDVAWRQEAFGSNTY 131
Query: 68 KKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYIS 114
+PPT+SFF FVV+ FK T+L+L VCA LSL FG+ ++ +AV + IS
Sbjct: 132 PRPPTKSFFHFVVEAFKDLTILVLLVCATLSLCFGIKEHGLKEGWYDGGSILVAVFLVIS 191
Query: 115 VSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADG 174
VSA S Y QN++F+KL SKVSN+IQV+VVRN+ QQI + +VVGDV+CL+IGDQVPADG
Sbjct: 192 VSAVSNYRQNRQFDKL-SKVSNNIQVNVVRNEICQQISIFEIVVGDVVCLRIGDQVPADG 250
Query: 175 IFLDGHSLQIQESD-----HNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIM 229
+FLDGHSLQ+ ES NVEVN+SQNPFL SGTKV DGY ML T+VGMNTTWGQ+M
Sbjct: 251 LFLDGHSLQVDESSITGESDNVEVNTSQNPFLFSGTKVADGYALMLVTSVGMNTTWGQMM 310
Query: 230 RQTSYNTSEWTLLKARVRKLTSLVDLIGLAITF------------------------SGL 265
S +T+E T L+AR+ +LTS + +GL + F +G
Sbjct: 311 STISRDTNEQTPLQARLNELTSSIGKVGLTVAFLVLVVLLVRYFTGNTKDDNGNKEFNGR 370
Query: 266 LMILD--LNAVVNLI----------IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACET 313
D +NAVV +I IPEGLPLAVT+T+AYSMKR+M D AMVRKLSACET
Sbjct: 371 KTKSDDVVNAVVGIIASAVSILVMSIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACET 430
Query: 314 MGSATVICTDKTGTLTLNQMK---------GAADHSNIAPKVVELIQQGFALNTTAGFYK 364
MGSAT ICTDKTGTLTLNQMK S+IA +++LIQ G ALNTT Y+
Sbjct: 431 MGSATTICTDKTGTLTLNQMKVTKFWLGKQPIEASSSIATNILKLIQHGIALNTTGSIYR 490
Query: 365 RTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRK 424
T+ ++E SGS EKAILSW + + MDME ++++C IL VEAFNS +K+S ++MRK
Sbjct: 491 DTTA---KLEFSGSPTEKAILSWSVQELGMDMEVLKKNCTILHVEAFNSEKKRSGILMRK 547
Query: 425 KADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFA 484
K DNT+HVHWKGAAE+ILAMCSSYYDASG +K L V R FEQIIQGMAA SL+C+AFA
Sbjct: 548 KTDNTIHVHWKGAAEMILAMCSSYYDASGRMKDLNVTERMTFEQIIQGMAASSLRCIAFA 607
Query: 485 HKQVPVPEEELNE-------ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDN 537
HKQ+P E E+ E ++L L+GL+GIKDPCRPG++KAVEDCQ+AGVN+KMITGDN
Sbjct: 608 HKQIPEEEHEIKEGRQKIKEDSLTLIGLMGIKDPCRPGVRKAVEDCQHAGVNVKMITGDN 667
Query: 538 IFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDDKLAM 584
+FTA+AIAT+CGILK + FR YT EE+MEKV+KI VMAR+SP DKL M
Sbjct: 668 VFTARAIATECGILKADQNMNSEVVIEGEAFRKYTPEERMEKVDKICVMARSSPFDKLLM 727
Query: 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTL 644
++CLK KGHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDIIILDDNFA+ +
Sbjct: 728 IRCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVAMV 787
Query: 645 LNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALA 704
L WGRCVY NIQKFIQF LT++++++ NF+A + G+ PLTAVQLLW+NLI+ TLGALA
Sbjct: 788 LRWGRCVYNNIQKFIQFQLTVNLAALAINFVAVLSAGEVPLTAVQLLWVNLIMDTLGALA 847
Query: 705 LVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNENVK 764
L TEQPTKELMEK PV EPLITN+MWRNLLAQA YQIAVLLTL FKG S+ GV + +K
Sbjct: 848 LATEQPTKELMEKQPVGKVEPLITNIMWRNLLAQALYQIAVLLTLQFKGGSIFGVKDKIK 907
Query: 765 DTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFAD 824
+T+IFNTFVLCQVFNEFNARKLEKKN+FKGIHKNK FLG+IGIT++LQVVMVE L KFAD
Sbjct: 908 NTLIFNTFVLCQVFNEFNARKLEKKNIFKGIHKNKLFLGVIGITVILQVVMVEFLNKFAD 967
Query: 825 TEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYL 863
TE L+ QW +CI IAA+SWPIG+ VKCIPV K L YL
Sbjct: 968 TERLDRGQWEACIAIAAMSWPIGFVVKCIPVSEKPFLRYL 1007
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432816|ref|XP_002283579.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/941 (62%), Positives = 703/941 (74%), Gaps = 89/941 (9%)
Query: 8 TDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTY 67
+DID +L ++VK KNLD L + GG VA AL+ D GI G +D ARR+ FGSNTY
Sbjct: 79 SDIDQTSLTDLVKAKNLDQLLELGGVEGVAEALKADFKNGIHGDVQDVARRKQEFGSNTY 138
Query: 68 KKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYIS 114
+KPP +S FVV+ F+ T+L+L CA LSL FG+ ++F+AV + IS
Sbjct: 139 QKPPPKSILHFVVEAFEDLTILVLLACATLSLGFGIKEHGVKEGWYDGGSIFLAVFLVIS 198
Query: 115 VSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADG 174
VSA S + QN++F+KL SKVSN+IQVDVVR RRQQI + +VVGDV+CLKIGDQVPADG
Sbjct: 199 VSAVSNFKQNRQFDKL-SKVSNNIQVDVVRQGRRQQISIFEIVVGDVVCLKIGDQVPADG 257
Query: 175 IFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQI 228
+FLDGHSLQ+ ES DH VEVN+S NPFL SGTK+ DGYGRML T+VGMNTTWG++
Sbjct: 258 LFLDGHSLQVNESSMTGESDH-VEVNTSLNPFLFSGTKIADGYGRMLVTSVGMNTTWGEM 316
Query: 229 MRQTSYNTSEWTLLKARVRKLTSLVDLIGLAIT------------------------FSG 264
M S T+E T L+AR+ KLTS + +GLA+ F+G
Sbjct: 317 MSTISRETNEQTPLQARLNKLTSSIGKVGLAVAFLVLVVLLVRYFTGNTEDENRNQEFNG 376
Query: 265 LLMILD--LNAVVNLII----------PEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACE 312
D +NAVV +I PEGLPLAVT+T+AYSMKR+M D AMVRKLSACE
Sbjct: 377 SKTKADDIVNAVVGIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACE 436
Query: 313 TMGSATVICTDKTGTLTLNQMK---------GAADHSNIAPKVVELIQQGFALNTTAGFY 363
TMGSAT ICTDKTGTLTLNQMK S+I+ +++LIQQG ALNTT Y
Sbjct: 437 TMGSATTICTDKTGTLTLNQMKVTKFWLGKQPIEAASSISTNLLKLIQQGVALNTTGSIY 496
Query: 364 KRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMR 423
+ S + E SGS EKAILSW +L + MDME+++++ IL VEAFNS +K+S +++R
Sbjct: 497 REPSS--FKFEFSGSPTEKAILSWAVLELDMDMERMKKNYNILHVEAFNSEKKRSGILIR 554
Query: 424 KKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAF 483
KKADNT+HVHWKGAAE+ILAMCSSYYD SG++K ++ G R FEQIIQGMAA SL+C+A
Sbjct: 555 KKADNTIHVHWKGAAEMILAMCSSYYDVSGSMKDMDDGERMIFEQIIQGMAASSLRCIAL 614
Query: 484 AHKQVPVPEEE-------LNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGD 536
AHKQ+P E E L E++L L+ L+GIKDPCRPG++KAVEDCQYAGVN+KMITGD
Sbjct: 615 AHKQIPEEEHEIGEGPQKLKEDSLTLIALVGIKDPCRPGVRKAVEDCQYAGVNVKMITGD 674
Query: 537 NIFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDDKLA 583
NIFTA+AIAT+CGIL+P FR YT+EE+MEKV+KI+VMAR+SP DKL
Sbjct: 675 NIFTARAIATECGILRPGQEMNSEAVVEGEVFRQYTQEERMEKVDKIHVMARSSPFDKLL 734
Query: 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVT 643
MV+CLK KGHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDIIILDDNFA+ T
Sbjct: 735 MVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVAT 794
Query: 644 LLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGAL 703
+L WGRCVY NIQKFIQF LT++V++++ NF+AA G+ PLTAVQLLW+NLI+ TLGAL
Sbjct: 795 VLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAASAGEVPLTAVQLLWVNLIMDTLGAL 854
Query: 704 ALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNENV 763
AL TE+PTKELMEKPPV EPLITN+MWRNLLAQA YQI VLLTL F GES+ GVN+ V
Sbjct: 855 ALATERPTKELMEKPPVGRAEPLITNIMWRNLLAQALYQIVVLLTLQFNGESIFGVNQKV 914
Query: 764 KDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFA 823
KDT+IFNTFVLCQVFNEFNAR+LEKKNVF+GIHKNK FLGIIGITI+LQVVMVE LKKFA
Sbjct: 915 KDTLIFNTFVLCQVFNEFNARELEKKNVFEGIHKNKLFLGIIGITIILQVVMVEFLKKFA 974
Query: 824 DTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYL 863
DTE L+W QWG+CIG+AA SWPIGW VKCIPV K L YL
Sbjct: 975 DTERLDWGQWGACIGVAAASWPIGWLVKCIPVSDKPVLDYL 1015
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432826|ref|XP_002279567.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/943 (61%), Positives = 703/943 (74%), Gaps = 91/943 (9%)
Query: 8 TDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTY 67
++ D +L +IVK K+L L + GG VA L+TD GI G+ E R+ FGSNTY
Sbjct: 67 SNFDQHSLTQIVKHKSLTQLLELGGVEGVAIVLETDAENGIHGAVEGVTCRRKAFGSNTY 126
Query: 68 KKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-------------NLFIAVSIYIS 114
++PPT+SFF FVV+ FK T+LIL CA LSL FG+ ++ +AV + IS
Sbjct: 127 QEPPTKSFFYFVVEAFKDVTILILVACATLSLGFGIKEEGLKEGWYDGGSILVAVFLVIS 186
Query: 115 VSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADG 174
VSA S + QN++F+KL SKVSN+IQVDVVR+ RRQQI + VVVGDV+CLKIGDQVPADG
Sbjct: 187 VSAVSNFRQNRQFDKL-SKVSNNIQVDVVRDGRRQQISIFEVVVGDVVCLKIGDQVPADG 245
Query: 175 IFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQI 228
+F DGHSLQ+ ES DH VEV++S NPFL SGT+V DGY RML T+VGMNT WG++
Sbjct: 246 LFQDGHSLQVDESSMTGESDH-VEVDTSLNPFLFSGTRVADGYARMLVTSVGMNTAWGEM 304
Query: 229 MRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL---------DLNA------ 273
M S + +E T L+AR+ KLTS + +GLA+ F L ++L D N
Sbjct: 305 MSTISRDANEQTPLQARLNKLTSSIGKVGLAVAFLVLTVLLVRYFTGSTEDENGNQEFKG 364
Query: 274 -------VVNLII--------------PEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACE 312
+VN ++ PEGLPLAVT+T+AYSMKR+M D AMVR+LSACE
Sbjct: 365 SLTKADDIVNAVVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRRLSACE 424
Query: 313 TMGSATVICTDKTGTLTLNQMK-----------GAADHSNIAPKVVELIQQGFALNTTAG 361
TMGSAT ICTDKTGTLTLNQMK S+IA V++LIQQG ALNTT
Sbjct: 425 TMGSATTICTDKTGTLTLNQMKVTKFWLGQDPIQENASSSIATDVLKLIQQGVALNTTGS 484
Query: 362 FYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVM 421
Y+ TSGS + E SGS EKAILSW +L ++MDME+++Q+C IL+VEAFNS +KQS V
Sbjct: 485 IYRATSGS--KYEFSGSPTEKAILSWAVLELNMDMEELKQTCTILRVEAFNSEKKQSGVA 542
Query: 422 MRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCL 481
+R KADN VHVHWKGAAE+IL MCS+YYDASG+++ L R FEQIIQGMAA SL+C+
Sbjct: 543 LRNKADNKVHVHWKGAAEMILEMCSTYYDASGSMRDLGHVERTTFEQIIQGMAASSLRCI 602
Query: 482 AFAHKQVPVPEEE-------LNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMIT 534
AFAH Q+P E E L E++L L+GL+GIKDPCRPG++KAVEDCQ+AGVN+KMIT
Sbjct: 603 AFAHNQLPEEEHEIREATQKLKEDSLTLIGLVGIKDPCRPGVRKAVEDCQHAGVNVKMIT 662
Query: 535 GDNIFTAKAIATQCGILKPE-------------FRNYTEEEKMEKVEKIYVMARASPDDK 581
GDNIFTA+AIAT+CGIL+P+ F YT +E+MEKV+KI VMAR+SP DK
Sbjct: 663 GDNIFTARAIATECGILRPDQDMNNEAVVEGEVFWQYTPDERMEKVDKIRVMARSSPFDK 722
Query: 582 LAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATA 641
L MV+CLK KGHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKESSDIIILDDNFA+
Sbjct: 723 LLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASV 782
Query: 642 VTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLG 701
T+L WGRCVY NIQKFIQF LT++V++++ NF+AAV G+ PLTAVQLLW+NLI+ TLG
Sbjct: 783 ATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEIPLTAVQLLWVNLIMDTLG 842
Query: 702 ALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE 761
ALAL TEQPTKELMEKPP+ TEPLI+N+MWRNLLAQA YQIAVLLTL FKGES+ GV++
Sbjct: 843 ALALATEQPTKELMEKPPMGRTEPLISNIMWRNLLAQALYQIAVLLTLQFKGESIFGVSK 902
Query: 762 NVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKK 821
VKDT+IFNTFVLCQVFNEFNAR+LEKK +FKG+HKNK FLGIIGITI+LQVVMVE LKK
Sbjct: 903 KVKDTLIFNTFVLCQVFNEFNARELEKKTIFKGLHKNKLFLGIIGITIILQVVMVEFLKK 962
Query: 822 FADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYL 863
FADTE L+W QWG+CIGIAA SWPIGW VK IPV K +SYL
Sbjct: 963 FADTERLDWGQWGACIGIAAASWPIGWVVKSIPVSDKPFISYL 1005
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 881 | ||||||
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.591 | 0.504 | 0.605 | 1.7e-211 | |
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.592 | 0.513 | 0.607 | 5.2e-210 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.400 | 0.328 | 0.595 | 5.7e-197 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.400 | 0.325 | 0.563 | 4e-196 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.400 | 0.330 | 0.587 | 2.1e-178 | |
| ASPGD|ASPL0000034221 | 1152 | AN2827 [Emericella nidulans (t | 0.392 | 0.300 | 0.434 | 1.5e-140 | |
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.694 | 0.6 | 0.387 | 3.1e-140 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.535 | 0.460 | 0.441 | 1.9e-138 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.539 | 0.461 | 0.434 | 9.4e-137 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.585 | 0.508 | 0.429 | 3.6e-135 |
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1646 (584.5 bits), Expect = 1.7e-211, Sum P(2) = 1.7e-211
Identities = 326/538 (60%), Positives = 404/538 (75%)
Query: 342 IAPKVVELIQQGFALNTTAGFYKRTXXXXXXXXXXXXXXXKAILSWPILGMSMDMEQIRQ 401
I+P V++L+ QG LNTT KA+LSW +L + MDME ++Q
Sbjct: 483 ISPDVLDLLYQGTGLNTTGSVC--VSDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVKQ 540
Query: 402 SCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVG 461
+L+VE F+S +K+S V++R+K+DNTVHVHWKGAAE++LAMCS YY ++G+V ++
Sbjct: 541 KHEVLRVETFSSAKKRSGVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDST 600
Query: 462 ARERFEQIIQGMAAGSLQCLAFAHKQVPVPXXXXXXXXXXXXXXXXXKDPCRPGLKKAVE 521
A+ R + IIQGMAA SL+C+AFAHK + KDPCRPG+ KAVE
Sbjct: 601 AKSRIQAIIQGMAASSLRCIAFAHK-IASNDSVLEEDGLTLMGIVGLKDPCRPGVSKAVE 659
Query: 522 DCQYAGVNIKMITGDNIFTAKAIATQCGIL----KPE---------FRNYTEEEKMEKVE 568
C+ AGV IKMITGDN+FTAKAIA +CGIL K E FRNYT+EE+M+KV+
Sbjct: 660 TCKLAGVTIKMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVD 719
Query: 569 KIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKES 628
KI VMAR+SP DKL MVKCL+LKGHVVAVTG+G DAPAL+EA++GLSMGIQGT VAKES
Sbjct: 720 KIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKES 779
Query: 629 SDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAV 688
SDI+ILDDNFA+ T+L WGRCVY NIQKFIQF LT++V++++ NF+AA+ G+ PLTAV
Sbjct: 780 SDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAV 839
Query: 689 QLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLT 748
QLLW+NLI+ TLGALAL TE+PT EL+++ PV TE LITNVMWRNLL Q+ YQIAVLL
Sbjct: 840 QLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLI 899
Query: 749 LLFKGESVLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGIT 808
L FKG S+ V + VKDT+IFNTFVLCQVFNEFNAR++EKKNVFKG+H+N+ F+GII IT
Sbjct: 900 LQFKGMSIFSVRKEVKDTLIFNTFVLCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAIT 959
Query: 809 IVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKS-LSYLSN 865
IVLQV+MVE LKKFADT LN QWG+CI +A++SWPIG+F K IPV LSY N
Sbjct: 960 IVLQVIMVEFLKKFADTVRLNGWQWGTCIALASLSWPIGFFTKFIPVSETPFLSYFKN 1017
|
|
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1635 (580.6 bits), Expect = 5.2e-210, Sum P(2) = 5.2e-210
Identities = 328/540 (60%), Positives = 401/540 (74%)
Query: 340 SNIAPKVVELIQQGFALNTTAGFYKRTXXXXXXXXXXXXXXXKAILSWPILGMSMDMEQI 399
S+++ +VVEL QG A+NTT +K KAILSW + + M ME++
Sbjct: 474 SSVSQRVVELFHQGVAMNTTGSVFK--AKAGTEYEFSGSPTEKAILSWAVEELEMGMEKV 531
Query: 400 RQSCVILQVEAFNSHRKQSRVMMRKKADNTVH--VHWKGAAEIILAMCSSYYDASGNVKH 457
+ ++ VE FNS +K+S V+M+KK NT + VHWKGAAE ILAMCS++ D SG V+
Sbjct: 532 IEEHDVVHVEGFNSEKKRSGVLMKKKGVNTENNVVHWKGAAEKILAMCSTFCDGSGVVRE 591
Query: 458 LEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPXXXXXXXXXXXXXXXXXKDPCRPGLK 517
++ + +FE+IIQ MAA SL+C+AFA+ + KDPCRPG+K
Sbjct: 592 MKEDDKIQFEKIIQSMAAKSLRCIAFAYSEDNEDNKKLKEEKLSLLGIIGIKDPCRPGVK 651
Query: 518 KAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-------------FRNYTEEEKM 564
KAVEDCQ+AGVNIKMITGDNIFTA+AIA +CGIL PE FRNYT+EE++
Sbjct: 652 KAVEDCQFAGVNIKMITGDNIFTARAIAVECGILTPEDEMNSEAVLEGEKFRNYTQEERL 711
Query: 565 EKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV 624
EKVE+I VMAR+SP DKL MVKCLK GHVVAVTG+G DAPAL+EA++GLSMGIQGT V
Sbjct: 712 EKVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEV 771
Query: 625 AKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNP 684
AKESSDI+ILDDNFA+ T+L WGRCVY NIQKFIQF LT++V++++ NF+AAV G P
Sbjct: 772 AKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGDVP 831
Query: 685 LTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIA 744
LTAVQLLW+NLI+ TLGALAL TE+PT +LM+K P+ PLITN+MWRNLLAQAFYQI+
Sbjct: 832 LTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVAPLITNIMWRNLLAQAFYQIS 891
Query: 745 VLLTLLFKGESVLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGI 804
VLL L F+G S+ V E VK+T+IFNTFVLCQVFNEFNAR LEKKNVFKG+HKN+ F+GI
Sbjct: 892 VLLVLQFRGRSIFNVTEKVKNTLIFNTFVLCQVFNEFNARSLEKKNVFKGLHKNRLFIGI 951
Query: 805 IGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSL-SYL 863
I +T+VLQVVMVE LK+FADTE LN QWG CI IAA SWPIGW VK +PVP + SYL
Sbjct: 952 IVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAIAAASWPIGWLVKSVPVPERHFFSYL 1011
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1098 (391.6 bits), Expect = 5.7e-197, Sum P(3) = 5.7e-197
Identities = 222/373 (59%), Positives = 280/373 (75%)
Query: 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-------------F 555
KDPCRPG+K +V CQ AGV ++M+TGDN+ TA+AIA +CGIL + F
Sbjct: 681 KDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSDADLSEPTLIEGKSF 740
Query: 556 RNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615
R T+ E+ + +KI VM R+SP+DKL +V+ L+ +GHVVAVTG+G DAPAL EA++GL
Sbjct: 741 REMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQGHVVAVTGDGTNDAPALHEADIGL 800
Query: 616 SMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFL 675
+MGI GT VAKESSDIIILDDNFA+ V ++ WGR VY NIQKFIQF LT++V++++ N +
Sbjct: 801 AMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVV 860
Query: 676 AAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNL 735
AA+ G PLTAVQLLW+NLI+ TLGALAL TE PT LM +PPV EPLITN+MWRNL
Sbjct: 861 AAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIMWRNL 920
Query: 736 LAQAFYQIAVLLTLLFKGESVLG----VNEN---VKDTMIFNTFVLCQVFNEFNARKLEK 788
L QA YQ++VLLTL F+G S+LG V+E+ VK+T+IFN FVLCQ FNEFNARK ++
Sbjct: 921 LIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQAFNEFNARKPDE 980
Query: 789 KNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGW 848
KN+FKG+ KN+ F+GII IT+VLQV++VE L KFA T LNW QW C+GI ISWP+
Sbjct: 981 KNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKLNWKQWLICVGIGVISWPLAL 1040
Query: 849 FVKCIPVPAKSLS 861
K IPVPA +S
Sbjct: 1041 VGKFIPVPAAPIS 1053
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1042 (371.9 bits), Expect = 4.0e-196, Sum P(3) = 4.0e-196
Identities = 210/373 (56%), Positives = 270/373 (72%)
Query: 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-------------F 555
KDPCRPG+++AV C AGV ++M+TGDN+ TAKAIA +CGIL + F
Sbjct: 698 KDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSDTEAVEPTIIEGKVF 757
Query: 556 RNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615
R +E+E+ + +KI VM R+SP+DKL +V+ L+ G VVAVTG+G DAPAL EA++GL
Sbjct: 758 RELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKNGDVVAVTGDGTNDAPALHEADIGL 817
Query: 616 SMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFL 675
SMGI GT VAKESSDIIILDDNFA+ V ++ WGR VY NIQKFIQF LT++V++++ N +
Sbjct: 818 SMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVV 877
Query: 676 AAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNL 735
AA+ G PL AVQLLW+NLI+ TLGALAL TE PT LM + PV EPLITN+MWRNL
Sbjct: 878 AAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNL 937
Query: 736 LAQAFYQIAVLLTLLFKGESVLGVN-EN------VKDTMIFNTFVLCQVFNEFNARKLEK 788
L Q+FYQ+AVLL L F G S+LG+N EN VK+TMIFN FV+CQ+FNEFNARK ++
Sbjct: 938 LVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDE 997
Query: 789 KNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGW 848
NVF+G++KN F+ I+G+T +LQ+++V L KFA T L W W + I I +SWP+
Sbjct: 998 MNVFRGVNKNPLFVAIVGVTFILQIIIVTFLGKFAHTVRLGWQLWLASIIIGLVSWPLAI 1057
Query: 849 FVKCIPVPAKSLS 861
K IPVP +S
Sbjct: 1058 VGKLIPVPKTPMS 1070
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1075 (383.5 bits), Expect = 2.1e-178, Sum P(3) = 2.1e-178
Identities = 218/371 (58%), Positives = 274/371 (73%)
Query: 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL-------KPE------F 555
KDPCRPG+K +V CQ AGV ++M+TGDNI TAKAIA +CGIL +P F
Sbjct: 685 KDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILASDSDASEPNLIEGKVF 744
Query: 556 RNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615
R+Y+EEE+ E+I VM R+SP+DKL +V+ LK +GHVVAVTG+G DAPAL EA++GL
Sbjct: 745 RSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGL 804
Query: 616 SMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFL 675
+MGIQGT VAKE SDIIILDDNF + V ++ WGR VY NIQKFIQF LT++V++++ N +
Sbjct: 805 AMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVV 864
Query: 676 AAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNL 735
AA+ G+ PLTAVQLLW+NLI+ TLGALAL TE PT LM++ PV EPLITN+MWRNL
Sbjct: 865 AAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAPVGRREPLITNIMWRNL 924
Query: 736 LAQAFYQIAVLLTLLFKGESVLGVN-----ENVKDTMIFNTFVLCQVFNEFNARKLEKKN 790
QA YQ+ VLL L F+G S+L + E VK+T+IFN FV+CQVFNEFNARK ++ N
Sbjct: 925 FIQAMYQVTVLLILNFRGISILHLKSKPNAERVKNTVIFNAFVICQVFNEFNARKPDEIN 984
Query: 791 VFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFV 850
+F+G+ +N F+GII ITIVLQVV+VE L FA T L+W W CIGI +ISWP+
Sbjct: 985 IFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTTKLDWEMWLVCIGIGSISWPLAVIG 1044
Query: 851 KCIPVPAKSLS 861
K IPVP +S
Sbjct: 1045 KLIPVPETPVS 1055
|
|
| ASPGD|ASPL0000034221 AN2827 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 763 (273.6 bits), Expect = 1.5e-140, Sum P(6) = 1.5e-140
Identities = 155/357 (43%), Positives = 239/357 (66%)
Query: 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK-------PEFRNYTEE 561
+DP RPG+ +AV C +AGV ++M+TGDN+ TAKAIAT CGI P FR ++
Sbjct: 721 QDPIRPGVPEAVAKCHHAGVAVRMVTGDNMVTAKAIATDCGIYTGGIVMEGPHFRTLSDA 780
Query: 562 EKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG 621
E E + ++ V+AR+SP+DK +V L+ G +VAVTG+G D PAL+ AN+G SMGI G
Sbjct: 781 EFDEVLPQLQVLARSSPEDKRILVTKLRALGEIVAVTGDGTNDGPALKAANIGFSMGIAG 840
Query: 622 TAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG 681
T VAKE+S I+++DDNF++ +T L WGR V ++KF+QF +T+++++VL F+++V
Sbjct: 841 TEVAKEASAIVLMDDNFSSILTALMWGRAVNDAVRKFLQFQITVNITAVLLTFISSVADS 900
Query: 682 --KNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQA 739
++ LTAVQLLW+NLI+ +L ALAL T+ PT+E++ + P++ PLI+ MW+ ++ Q+
Sbjct: 901 EMRSVLTAVQLLWINLIMDSLAALALATDPPTEEILNRKPIKGGAPLISITMWKMIIGQS 960
Query: 740 FYQIAVLLTLLF-KGESVLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKK-NVFKGIHK 797
+Q+ V LTL F ++ L +++V+ +++FNTFV Q+FNEFN R+L+ + N+F G+H+
Sbjct: 961 IFQLIVTLTLHFGPRQNFLDYSDDVRRSIVFNTFVWMQIFNEFNNRRLDNRFNIFTGLHR 1020
Query: 798 NKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIP 854
N F+GI I + Q+V+ ++ QW CI +AAIS P V+ P
Sbjct: 1021 NWFFIGINCIMVGCQIVIAFYGGAAFSIVQIHDEQWAICILVAAISLPWAVVVRLFP 1077
|
|
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1032 (368.3 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 251/648 (38%), Positives = 370/648 (57%)
Query: 224 TWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMILDLNAVVNLIIPEGL 283
T ++M Y T++ V + L + L++ F+ M+ D V NL E +
Sbjct: 390 TADELMAMLEYFAVAVTIVVVAVPEGLPLA--VTLSLAFAMKKMMNDKALVRNLAACETM 447
Query: 284 PLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIA 343
A T+ + L +H V K CE + V D MK A S I
Sbjct: 448 GSATTIC-SDKTGTLTTNHMTVVKACICEQ--AKEVNGPDAA-------MKFA---SGIP 494
Query: 344 PKVVELIQQGFALNTTAGFYKRTXXXXXXXXXXXXXXXKAILSWPILGMSMDMEQIRQSC 403
V+L+ Q NT G + A+L + L + D +++RQ+
Sbjct: 495 ESAVKLLLQSIFTNT-GG--EIVVGKGNKTEILGTPTETALLEFG-LSLGGDFQEVRQAS 550
Query: 404 VILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGAR 463
+++VE FNS +K+ V++ + + H KGA+EI+L C Y + G V L+ +
Sbjct: 551 NVVKVEPFNSTKKRMGVVI-ELPERHFRAHCKGASEIVLDSCDKYINKDGEVVPLDEKST 609
Query: 464 ERFEQIIQGMAAGSLQCLAFAHKQVPVPXXXXX---XXXXXXXXXXXXKDPCRPGLKKAV 520
+ II+ A+ +L+ L A+ ++ KDP RPG+K++V
Sbjct: 610 SHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDPVRPGVKESV 669
Query: 521 EDCQYAGVNIKMITGDNIFTAKAIATQCGILK--------PEFRNYTEEEKMEKVEKIYV 572
C+ AG+ ++M+TGDN+ TAKAIA +CGIL PEFR ++EE ++ + K+ V
Sbjct: 670 AICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEELLKLIPKLQV 729
Query: 573 MARASPDDKLAMVKCLK-LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI 631
MAR+SP DK +V+ L+ + VVAVTG+G DAPAL EA++GL+MGI GT VAKES+D+
Sbjct: 730 MARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADV 789
Query: 632 IILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLL 691
IILDDNF+T VT+ WGR VY+NIQKF+QF LT++V +++ NFL+A L G PLTAVQLL
Sbjct: 790 IILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLL 849
Query: 692 WMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLF 751
W+N+I+ TLGALAL TE P +LM++ PV I+NVMWRN+L Q+ YQ+ ++ L
Sbjct: 850 WVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQT 909
Query: 752 KGESVLGVNENVKD----TMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGI 807
KG+++ G++ D T+IFN FV CQVFNE ++R++EK +VFKGI KN F+ ++
Sbjct: 910 KGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTC 969
Query: 808 TIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855
T+V QV+++E+L FADT LN QW I + + P+ +K IPV
Sbjct: 970 TVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKMIPV 1017
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1018 (363.4 bits), Expect = 1.9e-138, Sum P(2) = 1.9e-138
Identities = 215/487 (44%), Positives = 306/487 (62%)
Query: 382 KAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEII 441
+AIL + +L + D++ R+ IL++E FNS +K+ V+ + V KGA+EI+
Sbjct: 521 RAILEFGLL-LGGDVDTQRREHKILKIEPFNSDKKKMSVLT-SHSGGKVRAFCKGASEIV 578
Query: 442 LAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVP-VPXXXXXXXXX 500
L MC D++G L +I+G A+ +L+ L + + P
Sbjct: 579 LKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGDLPNGGY 638
Query: 501 XXXXXXXXKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------- 553
KDP RPG+++AV+ CQ AG+ ++M+TGDNI TAKAIA +CGIL
Sbjct: 639 TLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEG 698
Query: 554 -EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEAN 612
+FRN E + KI VMAR+ P DK +V L+ G VVAVTG+G DAPAL EA+
Sbjct: 699 SDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTGDGTNDAPALHEAD 758
Query: 613 VGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLF 672
+GL+MGI GT VAKE++D+II+DDNFAT V + WGR VY+NIQKF+QF LT++V +++
Sbjct: 759 IGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALII 818
Query: 673 NFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMW 732
NF++A + G PLTAVQLLW+N+I+ TLGALAL TE P + LM++ P+ T IT MW
Sbjct: 819 NFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMW 878
Query: 733 RNLLAQAFYQIAVLLTLLFKGESVLGVNEN----VKDTMIFNTFVLCQVFNEFNARKLEK 788
RN++ Q+ YQ+ VL L F G+ +L +N V +T+IFN+FV CQVFNE N+R++EK
Sbjct: 879 RNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEK 938
Query: 789 KNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGW 848
NVF+G+ K+ F+ ++ T+ QV++VE L FA T L+W W CI I ++S +
Sbjct: 939 INVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILIGSVSMILAV 998
Query: 849 FVKCIPV 855
+KCIPV
Sbjct: 999 GLKCIPV 1005
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| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1000 (357.1 bits), Expect = 9.4e-137, Sum P(2) = 9.4e-137
Identities = 213/490 (43%), Positives = 305/490 (62%)
Query: 382 KAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEII 441
+AIL + +L + D R+ IL++E FNS +K+ V++ KGA+EI+
Sbjct: 524 RAILEFGLL-LGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGA-RAFCKGASEIV 581
Query: 442 LAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVP-VPXXXXXXXXX 500
L MC + D++G L II+G A+ +L+ L +K + P
Sbjct: 582 LKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGELPDGGY 641
Query: 501 XXXXXXXXKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------- 553
KDP RPG+++AV+ CQ AG+ ++M+TGDNI TAKAIA +CGI
Sbjct: 642 TMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEG 701
Query: 554 -EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEAN 612
EFR+ + E + KI VMAR+ P DK +V L+ G VVAVTG+G DAPAL EA+
Sbjct: 702 SEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEVVAVTGDGTNDAPALHEAD 761
Query: 613 VGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLF 672
+GL+MGI GT VAKE++D+II+DDNF T V + WGR VY+NIQKF+QF LT++V +++
Sbjct: 762 IGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALII 821
Query: 673 NFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMW 732
NF++A + G PLTAVQLLW+N+I+ TLGALAL TE P + LM++ P+ T IT MW
Sbjct: 822 NFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMW 881
Query: 733 RNLLAQAFYQIAVLLTLLFKGESVL---GVNEN-VKDTMIFNTFVLCQVFNEFNARKLEK 788
RN+ Q+ YQ+ VL L F G+S+L G + V +T+IFN+FV CQVFNE N+R++EK
Sbjct: 882 RNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQVFNEINSREIEK 941
Query: 789 KNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGW 848
NVFKG+ + F ++ +T+V QV++VE L FA T L+W W I I +++ +
Sbjct: 942 INVFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWLLSILIGSLNMIVAV 1001
Query: 849 FVKCIPVPAK 858
+KC+PV ++
Sbjct: 1002 ILKCVPVESR 1011
|
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| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1007 (359.5 bits), Expect = 3.6e-135, Sum P(2) = 3.6e-135
Identities = 232/540 (42%), Positives = 322/540 (59%)
Query: 334 KGAADHSNIAPKVVELIQQGFALNTTAGFYKRTXXXXXXXXXXXXXXXKAILSWPILGMS 393
KG++ S I V+L+ Q N T G + AIL LG+S
Sbjct: 481 KGSSLQSEIPESAVKLLIQSI-FNNTGG--EVVVNKHGKTELLGTPTETAILE---LGLS 534
Query: 394 MD--MEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDA 451
+ ++ R+S +++VE FNS +K+ V++ + H KGA+EI+LA C ++
Sbjct: 535 LGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNS 594
Query: 452 SGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVP---VPXXXXXXXXXXXXXXXXX 508
SG V L+ + + I A +L+ L A+ + P
Sbjct: 595 SGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGI 654
Query: 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK--------PEFRNYTE 560
KDP RPG+K++VE C+ AG+ ++M+TGDNI TAKAIA +CGIL P FR +
Sbjct: 655 KDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQ 714
Query: 561 EEKMEKVEKIYVMARASPDDKLAMVKCLKLK-GHVVAVTGNGIKDAPALEEANVGLSMGI 619
EE +E + KI VMAR+SP DK +VK L+ VVAVTG+G DAPAL EA++GL+MGI
Sbjct: 715 EELLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGI 774
Query: 620 QGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVL 679
GT VAKES+D+IILDDNF+T VT+ WGR VY+NIQKF+QF LT++V +++ NF +A L
Sbjct: 775 AGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACL 834
Query: 680 VGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQA 739
G PLTAVQLLW+N+I+ TLGALAL TE P ELM++ PV ITN MWRN+L QA
Sbjct: 835 TGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRNILGQA 894
Query: 740 FYQIAVLLTLLFKGESVLGVNEN----VKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGI 795
YQ V+ L KG+++ G++ + +T+IFN FV CQVFNE ++R++E+ +VFKGI
Sbjct: 895 VYQFIVIWILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEISSREMEEIDVFKGI 954
Query: 796 HKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855
N F+ +IG T+ Q++++E L FA T L QW I I + PI +K IPV
Sbjct: 955 LDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQWIFSIFIGFLGMPIAAGLKTIPV 1014
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P63688 | CTPF_MYCBO | 3, ., 6, ., 3, ., - | 0.3037 | 0.8320 | 0.8099 | yes | no |
| Q9LY77 | ACA12_ARATH | 3, ., 6, ., 3, ., 8 | 0.5636 | 0.9659 | 0.8238 | yes | no |
| P63687 | CTPF_MYCTU | 3, ., 6, ., 3, ., - | 0.3037 | 0.8320 | 0.8099 | yes | no |
| P37278 | ATCL_SYNE7 | 3, ., 6, ., 3, ., 8 | 0.3014 | 0.8853 | 0.8423 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00020088001 | SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (1003 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 881 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-167 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-119 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-95 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-84 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-72 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-51 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-51 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-45 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 3e-45 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-41 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-38 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-28 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 7e-28 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-26 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-25 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-24 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-22 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 3e-20 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-18 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-18 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 7e-18 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-17 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-16 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-15 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-14 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-14 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-14 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-12 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-11 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 5e-11 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-10 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 4e-10 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 6e-08 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 3e-06 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 6e-06 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 1e-04 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 6e-04 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 748 bits (1932), Expect = 0.0
Identities = 349/934 (37%), Positives = 536/934 (57%), Gaps = 90/934 (9%)
Query: 5 LAKTDIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGS 64
+ T + + ++ + L ++ GG +AT L+TD++ G+ S RR+ ++G
Sbjct: 17 GFDVGVSILTDLTDIFKRAMPLYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGK 76
Query: 65 NTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGLN------------------LF 106
N + P +SF V T+++L V A++SL GL +
Sbjct: 77 NELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAIL 136
Query: 107 IAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKI 166
++V + + V+A + Y + +F +L + ++ ++ V+R + QQI + ++VVGD++ L
Sbjct: 137 VSVILVVLVTAVNDYKKELQFRQLNRE-KSAQKIAVIRGGQEQQISIHDIVVGDIVSLST 195
Query: 167 GDQVPADGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVG 220
GD VPADG+F+ G SL+I ES D ++ Q+PFLLSGT V +G GRML TAVG
Sbjct: 196 GDVVPADGVFISGLSLEIDESSITGESDP-IKKGPVQDPFLLSGTVVNEGSGRMLVTAVG 254
Query: 221 MNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGL---AITFSGLLM---------- 267
+N+ G++M + + T L+ ++ +L L+ G+ + F L +
Sbjct: 255 VNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGD 314
Query: 268 ----------ILDLNA----VVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACET 313
LD +V + +PEGLPLAVT+ +AYSMK++M D+ +VR L+ACET
Sbjct: 315 GRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACET 374
Query: 314 MGSATVICTDKTGTLTLNQM------------KGAADHSNIAPKVVELIQQGFALNTTAG 361
MGSAT IC+DKTGTLT N M N+ V ++ +G +LN+++
Sbjct: 375 MGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSS- 433
Query: 362 FYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVM 421
+ G GS E A+L + +L + D +++R ++++ FNS RK V+
Sbjct: 434 -EEVVDRGGKR-AFIGSKTECALLDFGLL-LLRDYQEVRAEEKVVKIYPFNSERKFMSVV 490
Query: 422 MRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCL 481
+ K + KGA+EI+L C D++G + ++R +I+ +A+ +L+ +
Sbjct: 491 V-KHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTI 549
Query: 482 AFAHKQVP---VPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNI 538
A++ P ++ + L L+G++GIKDP RPG+++AV++CQ AG+ ++M+TGDNI
Sbjct: 550 CLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNI 609
Query: 539 FTAKAIATQCGIL--------KPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590
TAKAIA CGIL EFR+ EE + K+ V+AR+SP DK +V LK
Sbjct: 610 DTAKAIARNCGILTFGGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKD 669
Query: 591 KGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRC 650
G VVAVTG+G DAPAL+ A+VG SMGI GT VAKE+SDII+LDDNFA+ V + WGR
Sbjct: 670 MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRN 729
Query: 651 VYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQP 710
VY NI+KF+QF LT++V +V+ F+ + + +PLTAVQLLW+NLI+ TL ALAL TE P
Sbjct: 730 VYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPP 789
Query: 711 TKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVN---------E 761
T+ L+++ P+ PLI+ MW+N+L QA YQ+ V LLF G S+ V+ +
Sbjct: 790 TEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQ 849
Query: 762 NVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKK 821
+T++FNTFVL Q+FNE NARKL ++NVF+G+ KN+ F+ I+G T QV++VE
Sbjct: 850 GELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGS 909
Query: 822 FADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855
F T L+ QW C+ + +S G ++ IPV
Sbjct: 910 FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 943
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 509 bits (1314), Expect = e-167
Identities = 263/885 (29%), Positives = 422/885 (47%), Gaps = 93/885 (10%)
Query: 36 VATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCA 95
+ L T G+ E R ++ +G N + S + FK +++L V A
Sbjct: 33 LLLELFTSPTTGLSEEEVKRRLKK--YGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAA 90
Query: 96 ILSLAFG-----LNLFIAVSIYISVSASSKYMQ----NKKFEKLLSKVSNSIQVDVVRNK 146
+LS G I + + + ++A ++Q K E L S +V R+
Sbjct: 91 LLSAFVGDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVL--RDG 148
Query: 147 RRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES-----------------DH 189
+ +I S +V GD++ L+ GD VPAD L+ L++ ES
Sbjct: 149 KFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKS 208
Query: 190 NVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKL 249
+ + ++ L SGT VV G + + A G T +G+I R T L+ ++ KL
Sbjct: 209 DAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKL 268
Query: 250 T---SLVDLIGLAITF---------SGLLMILDLNAVVNLIIPEGLPLAVTVTIAYSMKR 297
++ L+ A+ F L L A+ +PEGLP VT+ +A +R
Sbjct: 269 GKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQR 328
Query: 298 LMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMK--------GAADHSNIAPKVVEL 349
+ D+A+VR L+A ET+GS VIC+DKTGTLT N+M G D + K
Sbjct: 329 MAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPA 388
Query: 350 IQQGF---ALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPI-LGMSMDMEQIRQSCVI 405
+ + AL + K +G E A++ + LG S+D+ + I
Sbjct: 389 LLRFLLAAALCNSVTPEKN------GWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPI 442
Query: 406 LQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARER 465
L F+S RK+ V+++ + + KGA E+IL C S G ++ L
Sbjct: 443 LAEIPFDSERKRMSVIVKTD-EGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRT 497
Query: 466 FEQIIQGMAAGSLQCLAFAHKQVPVPEEELN----EENLILLGLLGIKDPCRPGLKKAVE 521
E+ ++ +A+ L+ LA A+K++ E++ E +L+ LGL GI+DP R +K+A+E
Sbjct: 498 LEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIE 557
Query: 522 DCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------EFRNYTEEEKMEKVEKIY 571
+ + AG+ + MITGD++ TA AIA +CGI E ++EE E VE++
Sbjct: 558 ELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELS 617
Query: 572 VMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI 631
V AR SP+ K +V+ L+ GHVVA+TG+G+ DAPAL+ A+VG++MG +GT AKE++DI
Sbjct: 618 VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADI 677
Query: 632 IILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKN-PLTAVQL 690
++LDDNFAT V + GR VYVNI+KFI + L+ +V VL + ++ PLT +QL
Sbjct: 678 VLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQL 737
Query: 691 LWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLL 750
LW+NL+ +L ALAL E P ++M++PP E L ++ + A+L L
Sbjct: 738 LWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILT 797
Query: 751 FKGESVLGVNENVK--------DTMIFNTFVLCQVFNEFNARKLEKKNVFK-GIHKNKSF 801
F + + + T F VL Q+ R + + NK
Sbjct: 798 FLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVR-SRGRPFLSSLLFSNKYL 856
Query: 802 LGIIGITIVLQVVMVEI---LKKFADTEGLNWIQWGSCIGIAAIS 843
+ + I+LQ++++ + K L+ +W I +A +
Sbjct: 857 WLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLL 901
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 381 bits (981), Expect = e-119
Identities = 263/856 (30%), Positives = 426/856 (49%), Gaps = 76/856 (8%)
Query: 36 VATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTF-KSFTVLILFVC 94
+ LQTD+ G++ S+E + R+ G N + ES + + F K+ +L+L
Sbjct: 12 TCSKLQTDLQNGLNSSQE-ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIAS 70
Query: 95 AILSLAFGLNLFIAVSIY--ISVSASSKYMQNKKFEKLLSKVSNSI--QVDVVRNKRRQQ 150
A++S+ G N+ AVSI I + + ++Q + EK L ++ + + ++R + +
Sbjct: 71 AVISVFMG-NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEH 129
Query: 151 ILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQESD---HNVEVNSSQNPFLLS---- 203
+L S +V GD++CL +GD+VPAD ++ L I ES+ V+ P +
Sbjct: 130 VLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGD 189
Query: 204 ----------GTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKL---T 250
GT V G+G+ + G NT +G + + T L+ + L
Sbjct: 190 LAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQL 249
Query: 251 SLVDLIGLA-ITFSGLLM---ILDLNAV-VNLI---IPEGLPLAVTVTIAYSMKRLMIDH 302
SLV + I G L++ + V+L IPEGLP+ VTVT+A + R+
Sbjct: 250 SLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKR 309
Query: 303 AMVRKLSACETMGSATVICTDKTGTLTLNQMKGA----ADHSNIAPKVVELIQQGFALNT 358
A+VRKL + ET+GS VIC+DKTGTLT N M +D + V L Q G +
Sbjct: 310 AIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVD 369
Query: 359 TAGFYKRTSGSGLEIELSGSSIEKAILS---WPILG-----------MSMDMEQIRQSCV 404
+ + + I +G+ A +LG M ++ +R++ +
Sbjct: 370 GDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYI 429
Query: 405 ILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARE 464
+ F+S RK V + D + KGA E +L C+ Y G L R+
Sbjct: 430 RVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRD 489
Query: 465 RFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQ 524
++ MA+ L+ +AFA + L LGL+GI DP RPG+K+AV
Sbjct: 490 VIQEEAAEMASAGLRVIAFASGP--------EKGQLTFLGLVGINDPPRPGVKEAVTTLI 541
Query: 525 YAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEE--KM------EKVEKIYVMARA 576
GV I MITGD+ TA +IA + G+ ++ + E+ M + V K+ V ARA
Sbjct: 542 TGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARA 601
Query: 577 SPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDD 636
SP+ K+ +VK L+ +G VVA+TG+G+ DAPAL+ A++G++MG GT VAKE++D+I+ DD
Sbjct: 602 SPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDD 661
Query: 637 NFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLI 696
+FAT ++ + G+ ++ NI+ FI F L+ SV+++ LA ++ NPL A+Q+LW+N++
Sbjct: 662 DFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINIL 721
Query: 697 VLTLGALALVTEQPTKELMEKPPVRLTEPLIT-NVMWRNLLAQAFYQIAVLLTLLFKGES 755
+ A +L E K++M KPP + ++T +++ + L++ I V +F E
Sbjct: 722 MDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAII--IVVGTLFVFVREM 779
Query: 756 VLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFK-GIHKNKSFLGIIGITIVLQ-- 812
GV TM F FV +FN R + K+VF+ G N+ F +G +I+ Q
Sbjct: 780 QDGVITARDTTMTFTCFVFFDMFNALACRS-QTKSVFEIGFFSNRMFNYAVGGSIIGQLL 838
Query: 813 VVMVEILKKFADTEGL 828
V+ L+ TE L
Sbjct: 839 VIYFPPLQSVFQTEAL 854
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 319 bits (819), Expect = 3e-95
Identities = 244/909 (26%), Positives = 382/909 (42%), Gaps = 152/909 (16%)
Query: 79 VVDTFKSFTVLILFVCAILSLAFGLNL------------FIAVSIYISVSASSKYMQNKK 126
V++ F+ V IL + A +S F+ + I + +A Q +
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILV-ANAIVGVWQERN 59
Query: 127 FEKLLS--KVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQI 184
EK + K S V+R+ R I ++V GD++ L +GD+VPAD L +L++
Sbjct: 60 AEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRV 119
Query: 185 QESDHNVEVNS----------------SQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQI 228
+S E S + L SGT VV G R + GM+T G+I
Sbjct: 120 DQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKI 179
Query: 229 MRQTSYNTSEWTLLKARV----RKLTSLVDLIGLAITFSGLLMILD-------------- 270
+ E T L+ ++ L+ ++ LI + + + D
Sbjct: 180 RDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYY 239
Query: 271 LNAVVNLI---IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGT 327
V L IPEGLP +T +A +++ +A+VRKL + ET+G TVIC+DKTGT
Sbjct: 240 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGT 299
Query: 328 LTLNQMK---------------------------------GAADHSNIAPKVVELIQ--- 351
LT NQM + EL
Sbjct: 300 LTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAA 359
Query: 352 ----QGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQ 407
N G Y++ G E L +EK L G+S +
Sbjct: 360 LCNDSSLDFNERKGVYEKV-GEATEAALK-VLVEKMGLPATKNGVSSKRRPALGCNSVWN 417
Query: 408 VEA-------FNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEV 460
+ F+ RK V+ + N + V KGA E +L C+ + G L
Sbjct: 418 DKFKKLATLEFSRDRKSMSVLCKPSTGNKLFV--KGAPEGVLERCTHILNGDGRAVPLTD 475
Query: 461 GARERFEQIIQGMAAG-SLQCLAFAHKQVPVPEEELN----------EENLILLGLLGIK 509
+ +I+ M +L+CLA A K +P P EE E +L +G++G+
Sbjct: 476 KMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGML 535
Query: 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------EFRN 557
DP RP + A+E C+ AG+ + MITGDN TA+AI + GI P EF
Sbjct: 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE 595
Query: 558 YTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617
++ + +R P K +V+ L+ +G +VA+TG+G+ DAPAL++A++G++M
Sbjct: 596 MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM 655
Query: 618 GIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAA 677
G GT VAKE+SD+++ DDNFAT V + GR +Y N+++FI++ ++ ++ V+ FL A
Sbjct: 656 G-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTA 714
Query: 678 VLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITN-------- 729
L L VQLLW+NL+ L A AL P K++M KPP R EPLIT
Sbjct: 715 ALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLV 774
Query: 730 -------------VMWRNLLAQAFYQIAVLLTLLFKGESVLGVNENVK--DTMIFNTFVL 774
V W L T + V E + T+ + V+
Sbjct: 775 VGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVV 834
Query: 775 CQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQ--VVMVEILKKFADTEGLNWIQ 832
++FN NA ++ + NK +G I +++ L ++ V L + L+
Sbjct: 835 IEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTD 894
Query: 833 WGSCIGIAA 841
W + ++
Sbjct: 895 WLMVLKLSL 903
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 281 bits (720), Expect = 1e-84
Identities = 172/617 (27%), Positives = 278/617 (45%), Gaps = 105/617 (17%)
Query: 105 LFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICL 164
+ V +++ + K L ++ N+ V+RN ++I ++V GDV+ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGW-KEIPAKDLVPGDVVLV 60
Query: 165 KIGDQVPADGIFLDGHSLQIQES-------------DHNVEVNSSQNPFLLSGTKVVDGY 211
K G+ VPADG+ L G S + ES + + + +GT V G
Sbjct: 61 KSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 212 GRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITF--------- 262
++ T G+ TT G+I E R I +
Sbjct: 120 LIVVVTPTGILTTVGRI-AVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLF 178
Query: 263 -------SGLLMILDLNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMG 315
S +L V+ +++P LP AVTV +A RL +VR L+A E +G
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 316 SATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIEL 375
+C+DKTGTLT N+M QG ++ + + L
Sbjct: 239 KVDYLCSDKTGTLTKNKMT----------------LQGVYIDGGKEDNSSSLVACDNNYL 282
Query: 376 SGSSIEKAIL-SWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHW 434
SG +EKA+L S ++G + + + IL V F+S K+ V++ D + +
Sbjct: 283 SGDPMEKALLKSAELVGKADKGNKEYK---ILDVFPFSSVLKRMSVIVE-TPDGSDLLFV 338
Query: 435 KGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEE 494
KGA E IL C++Y E+ +A L+ LAFA K++
Sbjct: 339 KGAPEFILERCNNY------------------EEKYLELARQGLRVLAFASKELE----- 375
Query: 495 LNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE 554
++L LGL+ +DP RP K+ +E+ + AG+ + MITGDN+ TAKAIA + GI
Sbjct: 376 ---DDLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGID--- 429
Query: 555 FRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG 614
V AR SP+ KL +V+ L+ KGH+VA+TG+G+ DAPAL++A+VG
Sbjct: 430 -----------------VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVG 472
Query: 615 LSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNF 674
++MG AK ++DI++LDD+ + V + GR ++ NI+ I + + ++ +
Sbjct: 473 IAMG------AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLAL 526
Query: 675 LAAVLVGKNPLTAVQLL 691
L V++ P+ A L
Sbjct: 527 LLIVIILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 2e-72
Identities = 231/826 (27%), Positives = 380/826 (46%), Gaps = 135/826 (16%)
Query: 41 QTDIHGGIDGS--EEDRARRQGLFGSNTYKKPP-TESFFSFVVDTFKSFTVLILFVCAIL 97
TD+ G+ + E AR G N PP T + F F F++L L++ AIL
Sbjct: 30 GTDLSKGLSAARAAEILARD----GPNALTPPPTTPEWVKFCRQLFGGFSML-LWIGAIL 84
Query: 98 S-LAFGL-----------NLF--IAVSIYISVSASSKYMQNKKFEKLLSKVSNSI--QVD 141
LA+G+ NL+ + +S + ++ Y Q K K++ N + Q
Sbjct: 85 CFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQAL 144
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQESDHNVEVN------- 194
V+R+ + I VVVGD++ +K GD++PAD + ++ S E
Sbjct: 145 VIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPE 204
Query: 195 -SSQNPF-----LLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRK 248
+ +NP T V+G R + G T G+I S + T + +
Sbjct: 205 FTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEH 264
Query: 249 LTSLVD--LIGLAITFSGLLMILD---LNAVVNLI------IPEGLPLAVTVTIAYSMKR 297
++ + L ++F L +IL L AV+ LI +PEGL VTV + + KR
Sbjct: 265 FIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324
Query: 298 LMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGA--------------ADHSNIA 343
+ + +V+ L A ET+GS + IC+DKTGTLT N+M A D S ++
Sbjct: 325 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVS 384
Query: 344 PKVVELIQQGFALNTTAGFYKRTSGSG-------LEIELSGSSIEKAILSWP--ILGMSM 394
AL+ AG R L+ ++G + E A+L LG M
Sbjct: 385 FDKSSATWL--ALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM 442
Query: 395 DM-EQIRQSCVILQVEAFNSHRK-QSRVMMRKKADNTVHVH-WKGAAEIILAMCSSYYDA 451
+M E+ + I FNS K Q + + + H+ KGA E IL CSS
Sbjct: 443 EMRERNPKVVEI----PFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-I 497
Query: 452 SGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV---PE------EELN--EENL 500
G + L+ +E F+ + + L F H +P PE +++N +NL
Sbjct: 498 HGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNL 557
Query: 501 ILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTE 560
+GL+ + DP R + AV C+ AG+ + M+TGD+ TAKAIA GI+ N T
Sbjct: 558 CFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEG--NETV 615
Query: 561 EE------------------------------KMEKVEKIY------VMARASPDDKLAM 584
E+ E++++I V AR SP KL +
Sbjct: 616 EDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLII 675
Query: 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTL 644
V+ + +G +VAVTG+G+ D+PAL++A++G++MGI G+ V+K+++D+I+LDDNFA+ VT
Sbjct: 676 VEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTG 735
Query: 645 LNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG-KNPLTAVQLLWMNLIVLTLGAL 703
+ GR ++ N++K I + LT ++ + FL ++ PL + +L ++L + A+
Sbjct: 736 VEEGRLIFDNLKKSIAYTLTSNIPE-ITPFLIFIIANIPLPLGTITILCIDLGTDMVPAI 794
Query: 704 ALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTL 749
+L E+ ++M++ P P ++ L++ A+ QI ++ L
Sbjct: 795 SLAYEKAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMIQAL 837
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 1e-51
Identities = 146/576 (25%), Positives = 262/576 (45%), Gaps = 90/576 (15%)
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQESDHN-----VEVNSS 196
V+R+ + Q+I S +V GDV+ LKIGD VPAD +G +Q+ ++ V +
Sbjct: 96 VLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTG 155
Query: 197 QNPFLLSGTKVVDGYGRMLATAVGMNTTWGQ---IMRQTSYNTSEWTLLKARVRKLTSLV 253
+ SG+ V G + TA GMNT +G+ +++ T + L ++
Sbjct: 156 DIAY--SGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGH----------LQKIL 203
Query: 254 DLIGL-AITFSGLLMILDL----------------NAVVNLI--IPEGLPLAVTVTIAYS 294
IGL I G+L++++L A+V L+ IP +P ++VT+A
Sbjct: 204 SKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVG 263
Query: 295 MKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGF 354
L A+V +L+A E + ++C+DKTGTLTLN++ D GF
Sbjct: 264 AAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLS--IDEILP-------FFNGF 314
Query: 355 ALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSH 414
+ + S E +I+ A+L G + D+++ R +L+ F+
Sbjct: 315 DKDDVLLYAALASR-----EEDQDAIDTAVL-----GSAKDLKEARDGYKVLEFVPFDPV 364
Query: 415 RKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMA 474
K++ + KGA ++IL +C + E+ E+ + +A
Sbjct: 365 DKRTEATVEDPETGKRFKVTKGAPQVILDLC-----------DNKKEIEEKVEEKVDELA 413
Query: 475 AGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMIT 534
+ + L A LGLL + DP R K+ +E ++ GV +KM+T
Sbjct: 414 SRGYRALGVARTDEEGRWH--------FLGLLPLFDPPRHDTKETIERARHLGVEVKMVT 465
Query: 535 GDNIFTAKAIATQCGI----------LKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAM 584
GD++ AK A + G+ LK + R+ E VE A P+ K +
Sbjct: 466 GDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFPEHKYEI 525
Query: 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG-TAVAKESSDIIILDDNFATAVT 643
V+ L+ +GH+V +TG+G+ DAPAL++A+VG++ + G T A+ ++DI++ + + V
Sbjct: 526 VEILQKRGHLVGMTGDGVNDAPALKKADVGIA--VAGATDAARSAADIVLTEPGLSVIVD 583
Query: 644 LLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVL 679
+ R ++ ++ ++ + + ++ V F L ++
Sbjct: 584 AILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILI 619
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 2e-51
Identities = 117/345 (33%), Positives = 182/345 (52%), Gaps = 36/345 (10%)
Query: 411 FNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASG-NVKHLEVGARERFEQI 469
F+S K+ + T +++ KGA E I+ CSS G + LE RE
Sbjct: 533 FDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIAN 592
Query: 470 IQGMAAGSLQCLAFAHKQV--------PVPEEELN----EENLILLGLLGIKDPCRPGLK 517
++ +AA L+ LAFA K + E LN E +L LGL+GI DP R
Sbjct: 593 MESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESA 652
Query: 518 KAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE--EKM----------- 564
AVE C AG+N+ M+TGD TAKAIA + GI+ P F + +E + M
Sbjct: 653 GAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALS 712
Query: 565 -EKVEKI----YVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGI 619
E+V+ + V+AR +P K+ M++ L + A+TG+G+ D+P+L+ ANVG++MGI
Sbjct: 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGI 772
Query: 620 QGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVL 679
G+ VAK++SDI++ DDNFA+ + + GR ++ NI KF+ L +V+ + +
Sbjct: 773 NGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAF 832
Query: 680 VGKN-----PLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPP 719
+N PL+ V++LW +I A+ L E+ +LM++ P
Sbjct: 833 RDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLP 877
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 1e-45
Identities = 175/714 (24%), Positives = 314/714 (43%), Gaps = 72/714 (10%)
Query: 53 EDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGLNLFIAVSIY 112
+ R FG N + ++ F + + IL + +S +L V I
Sbjct: 37 VEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD-DLEATVIIA 95
Query: 113 ISVSASS--KYMQNKKFEK----LLSKVSNSIQVDVVRNKR----RQQILLSNVVVGDVI 162
+ V AS ++Q + E+ L + V N+ V V N+ ++ + +V GD+I
Sbjct: 96 LMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLI 155
Query: 163 CLKIGDQVPAD-------GIF-----LDGHSLQIQESDHNVEVNSSQNPF-----LLSGT 205
L GD +PAD +F L G SL +++ + GT
Sbjct: 156 ELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARD-PEILERENLCFMGT 214
Query: 206 KVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKA--RVRKLTSLVDLIGLAITF- 262
V+ G+ + + A G +T +G + + + K V KL L+ + +
Sbjct: 215 NVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLM 274
Query: 263 -SGLL-------MILDLNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314
+GL+ + L V L PE LP+ V+ +A + +V++LSA +
Sbjct: 275 INGLMKGDWLEAFLFALAVAVGLT-PEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNF 333
Query: 315 GSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIE 374
G+ ++CTDKTGTLT ++++ H + + + E + + LN+ +G +
Sbjct: 334 GAMDILCTDKTGTLTQDKIE-LEKHIDSSGETSERVLKMAWLNSY-------FQTGWKNV 385
Query: 375 LSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHW 434
L + + K Q + F+ R++ V++ +A+ T +
Sbjct: 386 LDHAVLAK--------LDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLI-C 436
Query: 435 KGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEE 494
KGA E +L +C+ + G V L + + + M ++ +A A K + V E +
Sbjct: 437 KGAVEEMLTVCT-HKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD 495
Query: 495 L---NEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGI- 550
+EE LI+ G LG DP + K+A+ G+N+K++TGDN I + GI
Sbjct: 496 FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGID 555
Query: 551 -----LKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDA 605
L + ++EE ++ K ++ AR +P K ++ LK GH V G+GI DA
Sbjct: 556 ANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDA 615
Query: 606 PALEEANVGLSMGIQGTA-VAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLT 664
PAL +A+VG+S + A +AKE+SDII+L+ + + GR + NI K+++ +
Sbjct: 616 PALRKADVGIS--VDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTAS 673
Query: 665 ISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKP 718
+ +V +A+ + P+ ++ LL NL+ L L ++ +E ++KP
Sbjct: 674 SNFGNVFSVLVASAFIPFLPMLSLHLLIQNLL-YDFSQLTLPWDKMDREFLKKP 726
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 3e-45
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 3/171 (1%)
Query: 684 PLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQI 743
PLT +Q+LW+NL+ L ALAL E P +LM++PP + EPL + + R +L Q
Sbjct: 3 PLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLIA 62
Query: 744 AVLLTLLFKGESVLGVNENVKD-TMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFL 802
V L + F G G++E+ TM FNT VL Q+FN NAR L + G+ NK L
Sbjct: 63 IVTLLVFFLGLLGFGISESGLAQTMAFNTLVLSQLFNALNARSLRRSLFKIGLFSNKLLL 122
Query: 803 GIIGITIVLQVVMVEI--LKKFADTEGLNWIQWGSCIGIAAISWPIGWFVK 851
+ ++++LQ++++ + L+ T L+ QW +G+A + + K
Sbjct: 123 LAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRK 173
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 3e-41
Identities = 182/690 (26%), Positives = 324/690 (46%), Gaps = 95/690 (13%)
Query: 89 LILFVCAILSLAFGLNLFIAVSIYISVSASS--KYMQ----NKKFEKLLSKVSNSIQVDV 142
++L + +S A +LF A I + V+ S+ ++Q K + L + VSN+ V
Sbjct: 107 ILLTILGAISYATE-DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLR 165
Query: 143 VRN----KRRQQILLSNVVVGDVICLKIGDQVPAD-------GIF-----LDGHSLQIQE 186
V N +I + +V GD+I L GD +PAD +F L G SL +++
Sbjct: 166 VINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEK 225
Query: 187 SDHNVEVNSSQNPF-----LLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTL 241
+ S NP GT VV G + + A G NT +GQ+ + S SE
Sbjct: 226 FATTRQPEHS-NPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNA 284
Query: 242 LKARVRKLTSLVDLIGLAITFSGLLMILD--------------LNAVVNLIIPEGLPLAV 287
+ + +++ L LI + + ++++++ L+ V L PE LP+ V
Sbjct: 285 FQQGISRVSWL--LIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLT-PEMLPMIV 341
Query: 288 TVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGA-ADHSNIAPKV 346
T T+A +L +V++L A + G+ ++CTDKTGTLT Q K +H++I+ K
Sbjct: 342 TSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLT--QDKIVLENHTDISGKT 399
Query: 347 VELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVIL 406
E + LN+ Y+ +GL K +L +L + +
Sbjct: 400 SERVLHSAWLNS---HYQ----TGL----------KNLLDTAVLEGVDEESARSLASRWQ 442
Query: 407 QVE--AFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARE 464
+++ F+ R++ V++ + ++ + KGA E IL +CS +G + L+
Sbjct: 443 KIDEIPFDFERRRMSVVVAENTEHHQLI-CKGALEEILNVCS-QVRHNGEIVPLDDIMLR 500
Query: 465 RFEQIIQGMAAGSLQCLAFAHKQVPVPEEE---LNEENLILLGLLGIKDPCRPGLKKAVE 521
R +++ + L+ +A A K +P E + +E +LIL G + DP + A++
Sbjct: 501 RIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALK 560
Query: 522 DCQYAGVNIKMITGDNIFTAKAIATQCG------ILKPEFRNYTEEEKMEKVEKIYVMAR 575
+ +GV +K++TGD+ A + + G ++ + +++E E+ + AR
Sbjct: 561 ALKASGVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFAR 620
Query: 576 ASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV--AKESSDIII 633
+P K +V LK +GHVV G+GI DAPAL A++G+S+ AV A+E++DII+
Sbjct: 621 LTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV---DGAVDIAREAADIIL 677
Query: 634 LDDNFATAVTLLNWGRCVYVNIQKFIQFHLTIS-----VSSVLFNFLAAVLVGKNPLTAV 688
L+ + + GR + N+ K+I+ +T S V SVL +A+ + P+ +
Sbjct: 678 LEKSLMVLEEGVIEGRRTFANMLKYIK--MTASSNFGNVFSVL---VASAFLPFLPMLPL 732
Query: 689 QLLWMNLIVLTLGALALVTEQPTKELMEKP 718
LL NL+ + +A+ + E ++KP
Sbjct: 733 HLLIQNLL-YDVSQVAIPFDNVDDEQIQKP 761
|
Length = 902 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 2e-38
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 16/223 (7%)
Query: 105 LFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICL 164
+ + V I + A +Y K + L K+ V+R+ + ++I +VVGD++ L
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALK-KLLPPTAATVIRDGKEEEIPADELVVGDIVLL 60
Query: 165 KIGDQVPADGIFLDGHSLQIQESD---HNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGM 221
K GD+VPADG ++G SL++ ES ++ V S+ + +GT V+ G +++ TA G
Sbjct: 61 KPGDRVPADGRIIEG-SLEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGE 119
Query: 222 NTTWGQIMRQTSYNTSEWTLLKARVRKLTS----LVDLIGLAITFSGLLMILD-----LN 272
+T G+I R S T L+ + KL +V + + + D L
Sbjct: 120 DTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 273 AVVNLI--IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACET 313
A+ L+ PE LPLAV + +A RL +V+ LSA ET
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 2e-28
Identities = 137/614 (22%), Positives = 231/614 (37%), Gaps = 131/614 (21%)
Query: 41 QTDIHGGIDGSEEDRARRQGLFGSNT--YKKPPTESFFSFVVDTFKS-FTVLILFVCAIL 97
T + D A+R+ +G N P SF + + F V +F IL
Sbjct: 131 STCAGHSNGLTTGDIAQRKAKYGKNEIEIPVP---SFLELLKEEVLHPFYVFQVF-SVIL 186
Query: 98 SLA---FGLNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLS 154
L + +L I V + + + S Y K+ ++L V V V+RN + I
Sbjct: 187 WLLDEYYYYSLCI-VFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASD 245
Query: 155 NVVVGDVICLKIGDQ----VPADGIFLDGHSLQIQES-------------------DHNV 191
+V GD + I +P D + L G S + ES D
Sbjct: 246 ELVPGD--IVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNGDDDED 302
Query: 192 --EVNSSQNPFLLSGTKVVD-----GYGRMLATAV--GMNTTWGQIMRQTSYNTSEWTLL 242
+S+ L GTK++ G LA V G +T+ GQ++R Y
Sbjct: 303 LFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP------- 355
Query: 243 KARVRKLT----------SLVDLIGLAITFSGLL--------MILDLNAVVNLIIPEGLP 284
K RV K +++ LIG T L+ +IL ++ +++P LP
Sbjct: 356 KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALP 415
Query: 285 LAVTVTIAYSMKRLMIDHAMVRKLSAC------ETMGSATVICTDKTGTLTLNQMKGAAD 338
+++ I S+ RL +K C G V C DKTGTLT + + D
Sbjct: 416 AELSIGINNSLARL------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGL----D 465
Query: 339 HSNIAPKVVELIQQGFALNTTAGFYKRT--------SGSGLEIELSGSSIEKAILS---W 387
+ ++ T S + LE +L G ++K + W
Sbjct: 466 LRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGW 525
Query: 388 ------------PILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWK 435
IL + + Q I++ F+S ++ V++ + + K
Sbjct: 526 TLEEDDESAEPTSILA-VVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVK 584
Query: 436 GAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE--- 492
GA E I ++CS ++++++ + LA A+K++P
Sbjct: 585 GAPETIQSLCS------------PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQK 632
Query: 493 -EELN----EENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ 547
++L+ E NL LG + ++P +P K+ +++ + A + MITGDN TA +A +
Sbjct: 633 AQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE 692
Query: 548 CGILKPEFRNYTEE 561
CGI+ P E
Sbjct: 693 CGIVNPSNTLILAE 706
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 7e-28
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 26/204 (12%)
Query: 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE 561
L+G++ + D RP K+A+ + G+ + M+TGDN TA+AIA + GI +
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE--------- 578
Query: 562 EKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG 621
V A P+DK +V+ L+ +G VA+ G+GI DAPAL A+VG++MG G
Sbjct: 579 ----------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SG 627
Query: 622 TAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG 681
T VA E++D++++ D+ + ++ R I++ + + + ++ A
Sbjct: 628 TDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPL----AAGGL 683
Query: 682 KNPLTAVQLLWMNLIVLTLGALAL 705
P A L M+ + + AL
Sbjct: 684 LTPWIAA--LAMSGSSVLVVLNAL 705
|
Length = 713 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 7e-26
Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 435 KGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEE 494
KGA E +LA+ + D V+ L+ RER + + A + L A +++P E
Sbjct: 470 KGAVEEMLAVATHVRDG-DTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESR 528
Query: 495 L-----NEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDN-IFTAKAIATQC 548
+E +L++ G L DP + A+ + GV +K++TGDN I TAK I +
Sbjct: 529 AQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK-ICREV 587
Query: 549 GI------LKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGI 602
G+ L E + +VE+ V A+ +P K ++K L+ GH V G+GI
Sbjct: 588 GLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGI 647
Query: 603 KDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFH 662
DAPAL +A+VG+S+ G +AKES+DII+L+ + + GR + NI K+
Sbjct: 648 NDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKY---- 702
Query: 663 LTISVSSVLFNF--LAAVLVGKN-----PLTAVQLLWMNLIVLTLGALALVTEQPTKELM 715
L ++ SS NF + +VLV P+ A+ LL NL+ + L+L ++ KE +
Sbjct: 703 LNMTASS---NFGNVFSVLVASAFIPFLPMLAIHLLLQNLM-YDISQLSLPWDKMDKEFL 758
Query: 716 EKP 718
KP
Sbjct: 759 RKP 761
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 111 bits (281), Expect = 1e-25
Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 28/207 (13%)
Query: 502 LLGLLGIKDPCRPGLKKAVED-CQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTE 560
LLG++ ++D RP K+A+ + G+ + M+TGDN A+A+A + GI +
Sbjct: 375 LLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-------- 426
Query: 561 EEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQ 620
V A P+DKLA+VK L+ +G VVA+ G+GI DAPAL A+VG++MG
Sbjct: 427 -----------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-A 474
Query: 621 GTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLV 680
G+ VA E++DI++L+D+ ++ T ++ R I++ + + L ++ ++ +
Sbjct: 475 GSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLL-- 532
Query: 681 GKNPLTAVQLLWMNL--IVLTLGALAL 705
PL + +L +++ L +L L
Sbjct: 533 ---PLWLLAVLLHEGSTVLVVLNSLRL 556
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 5e-24
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 495 LNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE 554
L N L G+L + D +P K+ ++ + G+ M+TGDN TAKA+A + GI
Sbjct: 398 LVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN-- 455
Query: 555 FRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG 614
V A PDDK A++K L+ KG VVA+ G+GI DAPAL +A+VG
Sbjct: 456 -----------------VRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVG 498
Query: 615 LSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655
+++G GT VA E++D+++L ++ T ++ R I
Sbjct: 499 IAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRI 538
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 2e-22
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 502 LLGLLGIKDPCRPGLKKAVEDCQYAGV-NIKMITGDNIFTAKAIATQCGILKPEFRNYTE 560
LG + + D RP +A+ + + G+ + M+TGD A+ +A + GI +
Sbjct: 353 YLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-------- 404
Query: 561 EEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQ 620
V A P+DKL +VK L+ K VA+ G+GI DAPAL A+VG++MG
Sbjct: 405 -----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGAS 453
Query: 621 GTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFL 675
G+ VA E++D+++L+D+ + + R +++ + L I + +L
Sbjct: 454 GSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALF 508
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 3e-20
Identities = 53/140 (37%), Positives = 86/140 (61%), Gaps = 20/140 (14%)
Query: 498 ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN 557
EN +LG++ +KD +PG+K+ + + G+ MITGDN TA AIA + G+ +F
Sbjct: 434 ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV--DDF-- 489
Query: 558 YTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617
+A A+P+DKLA+++ + +G +VA+TG+G DAPAL +A+VG++M
Sbjct: 490 ---------------IAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 534
Query: 618 GIQGTAVAKESSDIIILDDN 637
GT AKE+++++ LD N
Sbjct: 535 N-SGTQAAKEAANMVDLDSN 553
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 90.3 bits (225), Expect = 2e-18
Identities = 52/140 (37%), Positives = 85/140 (60%), Gaps = 20/140 (14%)
Query: 498 ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN 557
E+ +LG++ +KD +PG+K+ + + G+ MITGDN TA AIA + G+ +F
Sbjct: 432 EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV--DDF-- 487
Query: 558 YTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617
+A A+P+DKLA+++ + +G +VA+TG+G DAPAL +A+VG++M
Sbjct: 488 ---------------LAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532
Query: 618 GIQGTAVAKESSDIIILDDN 637
GT AKE+ +++ LD N
Sbjct: 533 N-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 2e-18
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 62/244 (25%)
Query: 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE 561
+ G++ +KD + G+K+ + G+ MITGDN TA AIA + G+ +F
Sbjct: 437 IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV--DDF------ 488
Query: 562 EKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG 621
+A A+P+DK+A+++ + +G +VA+TG+G DAPAL +A+VG++M G
Sbjct: 489 -----------IAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SG 536
Query: 622 TAVAKESSDIIILDDNFATAVTLLNWGR------------------------------CV 651
T AKE+++++ LD + + +++ G+
Sbjct: 537 TQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAA 596
Query: 652 YVNIQKFIQFHLTISVSSVL----FNFLAAVL--------VGKNPLTAVQLLWMNLIVLT 699
Y +Q L S++L FN L V PLTA LL NL +
Sbjct: 597 YPQLQALNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLRRNLWIYG 656
Query: 700 LGAL 703
LG L
Sbjct: 657 LGGL 660
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 88.2 bits (218), Expect = 7e-18
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 21/187 (11%)
Query: 498 ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN 557
E+ +LG++ +KD + GL + + + G+ M TGDN TA IA + G+ +
Sbjct: 428 EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----- 482
Query: 558 YTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617
+A P+DK+ +++ + KGH+VA+TG+G DAPAL EANVGL+M
Sbjct: 483 --------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAM 528
Query: 618 GIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAA 677
GT AKE++++I LD N + ++ G+ + + F + ++ F L A
Sbjct: 529 N-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAK-YFAILPA 586
Query: 678 VLVGKNP 684
+ + P
Sbjct: 587 MFMAAMP 593
|
Length = 673 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 86.2 bits (213), Expect = 4e-17
Identities = 85/361 (23%), Positives = 146/361 (40%), Gaps = 71/361 (19%)
Query: 40 LQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSL 99
+ T I G+ + ++ R G N + + ++ + ++L + A +S
Sbjct: 19 IGTSIPEGL--THDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAIS- 75
Query: 100 AFGLNLFI---AVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLS 154
F ++ +I +S I+++ ++Q K EK + + N S V+RN + I
Sbjct: 76 -FAMHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSH 134
Query: 155 NVVVGDVICLKIGDQVPAD------------GIFLDGHSLQIQESDHNVEVNSSQNP--- 199
++V GD+ LK GD +PAD L G SL + + H P
Sbjct: 135 DLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGD 194
Query: 200 ---FLLSGTKVVDGYGRMLATAVGMNTTWGQI---MRQTS-------------------- 233
S + V G + + A +N+ G I ++
Sbjct: 195 RINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKW 254
Query: 234 --YNTSEWT--LLKARV-----RKLTSL-VDLIGLAITFSGLLMI---LDLNAVVNL--- 277
T + T L V RKL+ L V L +AI F+ ++M D++ V +
Sbjct: 255 ILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAI 314
Query: 278 -----IIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQ 332
IIPE L +++T+A + + +VRKL A E +G+ IC+DKTGT+T +
Sbjct: 315 CLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGK 374
Query: 333 M 333
M
Sbjct: 375 M 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 3e-16
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 20/130 (15%)
Query: 505 LLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKM 564
LL I+DP R A++ AG + M+TGDN TA AIA + GI +
Sbjct: 644 LLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------ 691
Query: 565 EKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV 624
V+A PD K +K L+ +G VA+ G+GI DAPAL +A+VG++MG G+ V
Sbjct: 692 -------VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDV 743
Query: 625 AKESSDIIIL 634
A E++ I ++
Sbjct: 744 AIETAAITLM 753
|
Length = 834 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 2e-15
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES---DHNVEVNSSQN 198
V + +++ + V VGD++ ++ G+++P DG+ + G S + ES ++ V
Sbjct: 216 VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVEKKPG 274
Query: 199 PFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR-----QTSYNTSEWTLLKARVRKL---- 249
+ +GT +DG + T VG +TT +I+R Q+S KA +++L
Sbjct: 275 DEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSS---------KAPIQRLADRV 325
Query: 250 ------TSLVDLIGLAITFSGLLMILDLN-----AVVNLII--PEGLPLAVTVTIAYSMK 296
LV + L L D A+ L+I P L LA I +
Sbjct: 326 ASYFVPVVLV-IAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIG 384
Query: 297 RLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMK 334
R +++ A E + + DKTGTLT + +
Sbjct: 385 RAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPE 422
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 1e-14
Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 23/265 (8%)
Query: 89 LILFVCAILSLAFG-------LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVD 141
L++ + I + A G L + + A + LL+ ++ +V
Sbjct: 3 LLMALATIAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDA--LSALLALAPSTARV- 59
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQESDHNVE---VNSSQN 198
+ + +++ + + VGD++ ++ G+++P DG+ + G S + ES E V +
Sbjct: 60 LQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGESMPVEKKEG 118
Query: 199 PFLLSGTKVVDGYGRMLATAVGMNTTWGQI---MRQTSYNTSEWTLLKARV-RKLTSLVD 254
+ +GT DG + T +G ++T QI + + + + L R+ V
Sbjct: 119 DEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVL 178
Query: 255 LIGLAITFSGLLMILDLN---AVVNLII--PEGLPLAVTVTIAYSMKRLMIDHAMVRKLS 309
I L L + A+ L++ P L LA V I ++ +++
Sbjct: 179 AIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGD 238
Query: 310 ACETMGSATVICTDKTGTLTLNQMK 334
A E + + DKTGTLT +
Sbjct: 239 ALEKLAKVKTVVFDKTGTLTTGKPT 263
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 1e-14
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 34/210 (16%)
Query: 498 ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN 557
N +LGL+ ++D R ++A+ + + G+ M+TGDN A AIA + GI +FR
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---DFR- 610
Query: 558 YTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617
A P+DK+ V L +A+ G+GI DAPA++ A++G++M
Sbjct: 611 ----------------AGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAM 653
Query: 618 GIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAA 677
G GT VA E++D + + ++ R + NI++ I + + + ++ FL
Sbjct: 654 G-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNIT--IALGLKAI---FLVT 707
Query: 678 VLVGKNPLTAVQLLWMNLIVLTLGALALVT 707
L+G +T LW+ ++ + GA ALVT
Sbjct: 708 TLLG---ITG---LWLAVLADS-GATALVT 730
|
Length = 741 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 5e-14
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 14/206 (6%)
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES---DHNVEVNSSQN 198
V+R +++ + + VGDV+ +K G++VP DG+ L G S + ES +V V +
Sbjct: 59 VLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPG 117
Query: 199 PFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR---QTSYNTSEWTLLKARV-RKLTSLVD 254
+ +G +DG ++ T + ++T +I+ + ++ R R T +V
Sbjct: 118 DEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVL 177
Query: 255 LIGLAITFSGLLMILDL----NAVVNLII--PEGLPLAVTVTIAYSMKRLMIDHAMVRKL 308
I LAI L+ A+V L++ P L ++ ++ +++
Sbjct: 178 AIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGG 237
Query: 309 SACETMGSATVICTDKTGTLTLNQMK 334
+A E + + DKTGTLT + K
Sbjct: 238 AALEALAKIKTVAFDKTGTLTTGRPK 263
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 5e-12
Identities = 92/360 (25%), Positives = 152/360 (42%), Gaps = 87/360 (24%)
Query: 42 TDIHGGIDG-SEEDRARRQGLFGSN--TYKKPPTESFFSFVVDTFKSFT---VLILFVCA 95
+++ G +EED A R +G N ++KPP +V ++F + +L V A
Sbjct: 37 ANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPP-----HALVQLLQAFNNPFIYVLMVLA 91
Query: 96 ILSLA--FGLNL-------FIAVSIYIS-VSASS------KYMQNKKFEKLLSKVSNSIQ 139
+S + L L V I ++ V S ++ NK E L + V +
Sbjct: 92 AISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTAT 151
Query: 140 V----DVVRNKRRQQILLSNVVVGDVICLKIGDQVPAD-------GIF-----LDGHSLQ 183
V R++I + +V GD++ L GD +PAD +F L G +L
Sbjct: 152 VLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALP 211
Query: 184 IQESD-------HNVEVNSSQNPFLLS-------GTKVVDGYGRMLATAVGMNTTWGQIM 229
+++ D + + + LL GT VV G + A G T +G +
Sbjct: 212 VEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLA 271
Query: 230 R-------QTSY----NTSEWTLLKARVRKLTSLVDLIGLAITF------SGLLMILDLN 272
+ QT++ N+ W L +R + +V ++ L F LL L
Sbjct: 272 KSIVGTRAQTAFDRGVNSVSWLL----IRFMLVMVPVVLLINGFTKGDWLEALLFAL--- 324
Query: 273 AVVNLIIPEGLPLAVTVTIA---YSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLT 329
AV + PE LP+ V+ +A +M R + +V++L+A + G+ V+CTDKTGTLT
Sbjct: 325 AVAVGLTPEMLPMIVSSNLAKGAIAMARRKV---VVKRLNAIQNFGAMDVLCTDKTGTLT 381
|
Length = 903 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 5e-11
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 33/216 (15%)
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQESDHNVE---VNSSQN 198
+ + +++ + + GD++ + G+++P DG ++G S ++ ES E V
Sbjct: 96 LTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVG 154
Query: 199 PFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR-----QTSYNTSEWTLLKARVRKLTSLV 253
+++GT G + ATA G +TT QI+R Q S KA +++L V
Sbjct: 155 DPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQS---------KAPIQRLADKV 205
Query: 254 D------LIGLA-ITFSG-LLMILDLN-----AVVNLII--PEGLPLAVTVTIAYSMKRL 298
+I +A ITF L++ D AV LII P L LA IA +
Sbjct: 206 AGYFVPVVIAIALITFVIWLILGADFVFALEVAVTVLIIACPCALGLATPTVIAVATGLA 265
Query: 299 MIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMK 334
+ +++ A E + + DKTGTLT +
Sbjct: 266 AKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPT 301
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 5e-11
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 355 ALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSH 414
AL A F + +G EI G E A+L + + +D+E++R + FNS
Sbjct: 1 ALCNDAKFGENEEKNGGEI--IGDPTESALLVF-AEKLGIDVEELRARYPRVAEIPFNSE 57
Query: 415 RK-QSRVMMRKKADNTVHVHWKGAAEIILAMCSSY 448
RK S + + + D+ + KGA E IL CS+
Sbjct: 58 RKRMS-TVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 2e-10
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 17/187 (9%)
Query: 428 NTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQ 487
V + E A+ + A+G + G E +++ AG +
Sbjct: 16 EPVVPEAEALLEAAAALGVAIVIAAGE-NLTKEGREELVRRLLLRALAGEE----LLEEL 70
Query: 488 VPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ 547
+ + +L++LGL+ + DP PG ++A+++ + AG+ + ++TGDN TA AIA
Sbjct: 71 LRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARL 130
Query: 548 CGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK--LAMVKCLKLKGHVVAVTGNGIKDA 605
G+ + ++ PD K ++ L +K V + G+G+ D
Sbjct: 131 LGLFDALV----------SADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDI 180
Query: 606 PALEEAN 612
PA + A
Sbjct: 181 PAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 4e-10
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 35 AVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVC 94
V L TD+ G+ +E + R +G N + +S + + FK V+IL +
Sbjct: 8 EVLARLGTDLEKGL--TEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIILLIA 65
Query: 95 AILS 98
AI+S
Sbjct: 66 AIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 6e-08
Identities = 82/331 (24%), Positives = 124/331 (37%), Gaps = 79/331 (23%)
Query: 405 ILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNV--KHLEVGA 462
IL V FNS RK+ V++R D + + KGA +I SS + +HLE A
Sbjct: 511 ILNVLEFNSDRKRMSVIVRNP-DGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYA 569
Query: 463 RERFEQIIQGMAAGSLQ------------CLAFAHKQVPVPE-EELNEENLILLGLLGIK 509
E + S + A ++ + E E++LILLG I+
Sbjct: 570 SEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIE 629
Query: 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP---------------- 553
D + G+ + +E + AG+ I ++TGD + TA I C +L
Sbjct: 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATR 689
Query: 554 ---------------EFRNYTEEEKM--------------EKVEKIYVM----------A 574
EF N + + E++EK ++
Sbjct: 690 SVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICC 749
Query: 575 RASPDDKLAMVKCLKLK-GHVVAVTGNGIKDAPALEEANVGLSMGIQGTA--VAKESSDI 631
R SP K +V+ +K G G+G D ++EA+VG+ GI G A +SD
Sbjct: 750 RVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKEGMQAVMASDF 807
Query: 632 IILDDNFATAVTLLNW-GRCVYVNIQKFIQF 661
I F LL GR Y I K I +
Sbjct: 808 AI--GQFRFLTKLLLVHGRWSYKRISKMILY 836
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 3e-06
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 36 VATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCA 95
V LQTD+ G+ S E+ ARR +G N P S + F + + IL A
Sbjct: 12 VLERLQTDLEKGL--SSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILLAAA 69
Query: 96 ILSLAF 101
+LS
Sbjct: 70 VLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 6e-06
Identities = 58/273 (21%), Positives = 110/273 (40%), Gaps = 51/273 (18%)
Query: 572 VMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI 631
V AR +PD K +V+ L+ + V + G+G D AL++A+VG+S+ A A ++
Sbjct: 781 VFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISL---SEAEASVAAPF 837
Query: 632 IILDDNFATAVTLLNWGRCVYVN---IQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAV 688
+ + ++ GRC V + K++ + I SV +L L
Sbjct: 838 TSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGS-----NLGDG 892
Query: 689 QLLWMNLIVLTLGALALVTEQPTKELM-EKPPVRL-TEPLITNVMWRNLLAQAFYQIAVL 746
Q L ++L+++ AL + +P K+L E+PP L + ++T+V+ Q +
Sbjct: 893 QFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSNLFSVYILTSVL---------IQFVLH 943
Query: 747 LTLLFKGESVLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVF-------------- 792
+ + + + + N L +F
Sbjct: 944 ILSQV------YLVFELHAQPWY-KPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVN 996
Query: 793 -KG------IHKNKSFL-GIIGITIVLQVVMVE 817
KG I+KNK F+ +I +L V++++
Sbjct: 997 SKGPPFREPIYKNKPFVYLLITGLGLLLVLLLD 1029
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 560 EEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGI 619
+ + + V A A P+ K +++ LK + V + GNG D AL EA++G+ I
Sbjct: 61 QLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI-CTI 119
Query: 620 QGTAV---AKESSDIIILD 635
Q V ++D+++ +
Sbjct: 120 QQEGVPERLLLTADVVLKE 138
|
Length = 152 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 6e-04
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 394 MDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYD--- 450
+D+ RQ +L + F+S RK+ V++ D TV V KGA + ++ +
Sbjct: 594 IDIHGERQRFNVLGLHEFDSDRKRMSVIL-GCPDKTVKVFVKGADTSMFSVIDRSLNMNV 652
Query: 451 -----------ASGNVKHLEVGARE----RFEQIIQGMAAGSLQCLAFAHKQVPVPEEEL 495
+S ++ L VG RE FEQ A S + A V
Sbjct: 653 IRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNV- 711
Query: 496 NEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAI 544
E NL +LG I+D + G+ +A+E + AG+ + ++TGD TA +I
Sbjct: 712 -ENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 881 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.96 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.87 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.87 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.87 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.55 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.41 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.3 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.3 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.3 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.29 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.29 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.28 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.26 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.22 | |
| PLN02887 | 580 | hydrolase family protein | 99.18 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.18 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.16 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.11 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.1 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.09 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.02 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.0 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.95 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.94 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.92 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.85 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.83 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.8 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.75 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.75 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.63 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.57 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.55 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.53 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.48 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.45 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.38 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.21 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.17 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.14 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.14 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.11 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.1 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.08 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.01 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.98 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.96 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.96 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.95 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.93 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.92 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.91 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.79 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.76 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.62 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.6 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.54 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.53 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.51 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.34 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.3 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.3 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.28 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.19 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.14 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.1 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 97.1 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.1 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.09 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.06 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.98 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.96 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.96 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.92 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.89 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.82 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.8 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.79 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.74 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.74 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.63 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.56 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.52 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.51 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.45 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.33 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.33 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.22 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.2 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.12 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.07 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.06 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.05 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.93 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.89 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.85 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.84 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.67 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.66 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.58 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.57 | |
| PLN02940 | 382 | riboflavin kinase | 95.56 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.42 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.36 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.23 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.17 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.15 | |
| PLN02423 | 245 | phosphomannomutase | 95.09 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.03 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.97 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.87 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 94.85 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.81 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.72 | |
| PLN02811 | 220 | hydrolase | 94.69 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 94.4 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 94.32 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.99 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.95 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 93.9 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.81 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 93.71 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.5 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.39 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 93.05 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 93.05 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 92.84 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.44 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 92.21 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 91.8 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 91.15 | |
| PLN02151 | 354 | trehalose-phosphatase | 90.94 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 90.9 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 90.38 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 90.27 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 89.85 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 89.12 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 88.65 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 88.5 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 88.41 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 87.83 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 85.87 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 85.58 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 84.84 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 84.6 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 84.42 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 80.36 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 80.11 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-150 Score=1248.37 Aligned_cols=850 Identities=48% Similarity=0.793 Sum_probs=794.7
Q ss_pred ccCHHHHHHHHhhCChhHHHhhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHH
Q 043535 9 DIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTV 88 (881)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~ 88 (881)
.+..|.|.+|++.+|++.|++++++++++++|+||+..||+.+++|..+|++.||+|.+|+++.++||.+.|+.+++...
T Consensus 79 ~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TL 158 (1034)
T KOG0204|consen 79 GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTL 158 (1034)
T ss_pred ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchH
Confidence 67789999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeCCEEEEEeccc
Q 043535 89 LILFVCAILSLAFGL-------------NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSN 155 (881)
Q Consensus 89 ~~ll~~ail~~~~~~-------------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rdg~~~~I~~~~ 155 (881)
+++.++|++|+..++ ++++++++++++++..+|+|+++.++ +++.+++.++.|+|||+.++|+..|
T Consensus 159 iIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~-L~~~k~~~k~~ViR~G~r~~isI~d 237 (1034)
T KOG0204|consen 159 IILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRK-LQKEKRNIKFQVIRGGRRQQISIYD 237 (1034)
T ss_pred HHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhh-hhhhhhceEEEEEECCEEEEEEEee
Confidence 999999999998875 66777778888999999999999999 8888888899999999999999999
Q ss_pred cccCcEEEEcCCCeeccceeEEeccceeeecC------CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHH
Q 043535 156 VVVGDVICLKIGDQVPADGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIM 229 (881)
Q Consensus 156 Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes------~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~ 229 (881)
||||||+.++.||.+||||++++|+++.+||| ++ +.|+...++++++||.+.+|.++++|+.+|.+|..|+++
T Consensus 238 iVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~-v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m 316 (1034)
T KOG0204|consen 238 LVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDH-VQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIM 316 (1034)
T ss_pred eeeccEEEeecCCccccceEEEeccceeEecccccCCCcc-eeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHH
Confidence 99999999999999999999999999999998 55 778877899999999999999999999999999999999
Q ss_pred hhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------------h-----HHHHH-------Hhh
Q 043535 230 RQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL-------------------D-----LNAVV-------NLI 278 (881)
Q Consensus 230 ~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~-------------------~-----~~~~l-------~i~ 278 (881)
..+.....+++|+|-++++++..+..+++.++++++++.. + +..++ .++
T Consensus 317 ~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVA 396 (1034)
T KOG0204|consen 317 TLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVA 396 (1034)
T ss_pred HhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEE
Confidence 9998888899999999999999999999988888777654 0 11222 123
Q ss_pred ccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeec----------C---CCCChH
Q 043535 279 IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAAD----------H---SNIAPK 345 (881)
Q Consensus 279 iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~----------~---~~~~~~ 345 (881)
+|+|||+++++++++++++|.+++.++|.++++|++|+.++||+|||||||.|+|++++. . ...+++
T Consensus 397 VPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~ 476 (1034)
T KOG0204|consen 397 VPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPS 476 (1034)
T ss_pred CCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHH
Confidence 999999999999999999999999999999999999999999999999999999999883 1 135677
Q ss_pred HHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeC
Q 043535 346 VVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKK 425 (881)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~ 425 (881)
..+++.++.+.|++..+.. +..++.+.+..|+|+|.||+.+.. .+|.+++..|....+.+.+||+|.||+|+++++.+
T Consensus 477 ~~~ll~~gI~~Nt~g~v~~-~~~~g~~~~~~GspTE~AlL~f~~-~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~ 554 (1034)
T KOG0204|consen 477 LLDLLLQGIAQNTTGSVVK-PEKGGEQPEQLGSPTECALLGFGL-KLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLP 554 (1034)
T ss_pred HHHHHHHHHhhcCCCeEEe-cCCCCcCccccCCHHHHHHHHHHH-HhCcchHhhcchhheeEEeccCcccceeeEEEEcC
Confidence 8889999999999887776 333444678899999999999998 79999999999999999999999999999999988
Q ss_pred CCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC--------Ccccccc
Q 043535 426 ADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV--------PEEELNE 497 (881)
Q Consensus 426 ~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~--------~~~~~~e 497 (881)
+++.| +|+|||+|.|+..|+++.+.+|+..+++++.+..+++.++.|+.+|+|++|+|||+... ++++..+
T Consensus 555 ~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~ 633 (1034)
T KOG0204|consen 555 DGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPE 633 (1034)
T ss_pred CCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCC
Confidence 88765 99999999999999999999999999999999999999999999999999999998432 1235678
Q ss_pred cCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch----------hhhcCCHHHHHHHH
Q 043535 498 ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------EFRNYTEEEKMEKV 567 (881)
Q Consensus 498 ~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------~~~~~~~~~~~~~~ 567 (881)
.+++++|+++++||.||+++++|+.|++|||.|.|+||||..||++||.+|||..+ ++.++++++.+++.
T Consensus 634 ~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~ 713 (1034)
T KOG0204|consen 634 GGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIW 713 (1034)
T ss_pred CCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhh
Confidence 89999999999999999999999999999999999999999999999999999876 78889999999999
Q ss_pred hhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 568 EKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 568 ~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
++..|+||.+|.+|.-+|+.++++|++|+++|||.||+|||++||||.|||..|+++||++||++++||||++|+++++|
T Consensus 714 pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~W 793 (1034)
T KOG0204|consen 714 PKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKW 793 (1034)
T ss_pred hhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCc
Q 043535 648 GRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLI 727 (881)
Q Consensus 648 gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~ 727 (881)
||+.|.|++|+++|+++.|+..+++.|.+++..+.+|+++.|+||+|+++|.+.+++||+|+|.+++|+|+|+.|++|++
T Consensus 794 GR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LI 873 (1034)
T KOG0204|consen 794 GRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLI 873 (1034)
T ss_pred hhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccccCCC------cccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHH
Q 043535 728 TNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVN------ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSF 801 (881)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~ 801 (881)
++.||++++.|++||..+++++.|.+...|+.. .....|++|++||++|+||.++.|..++.|+|+++++|++|
T Consensus 874 t~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F 953 (1034)
T KOG0204|consen 874 TRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLF 953 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceE
Confidence 999999999999999999999999888777542 34567999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcccCCcccccc
Q 043535 802 LGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLSYL 863 (881)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~~~~~~~~~ 863 (881)
+.++.+++++|++++.|++.+|+++||+|.+|++|+.++++.|++..+.|.+|.+..++.+.
T Consensus 954 ~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~ 1015 (1034)
T KOG0204|consen 954 CVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKY 1015 (1034)
T ss_pred EEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheecccccccccee
Confidence 99999999999999999999999999999999999999999999999999999877766544
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-136 Score=1138.79 Aligned_cols=813 Identities=31% Similarity=0.468 Sum_probs=699.4
Q ss_pred CCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-----HH
Q 043535 31 GGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-----NL 105 (881)
Q Consensus 31 ~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~-----~~ 105 (881)
.+++|++.+|+||+++|||.+| +.+|+++||.|+++.++..++|+.+++||.++++.+|+++|++||...+ .+
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~~e~~vI 84 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADFDEPFVI 84 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcccceee
Confidence 6899999999999999999998 9999999999999999999999999999999999999999999999875 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEecccee
Q 043535 106 FIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQ 183 (881)
Q Consensus 106 ~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~ 183 (881)
.+++++++.+..++|| +.++.++.+++ +..++|+|+|+.+.++++||||||||.++-||+||||.|+++..++.
T Consensus 85 ~liiv~nvtVG~~QEy----~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~ 160 (972)
T KOG0202|consen 85 TLIIVINVTVGFVQEY----NAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKSLR 160 (972)
T ss_pred eeeeeeeeeeeeeeeh----hhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeeeee
Confidence 4444444444444444 44444555443 45899999999999999999999999999999999999999999999
Q ss_pred eecC------Ccccccc------------CCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHH
Q 043535 184 IQES------DHNVEVN------------SSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245 (881)
Q Consensus 184 vdes------~~~v~~~------------~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 245 (881)
+||| +| +.|. .++.|++|+||.|..|+++++|+.||.+|.+|++.+.+...++.+||+|+.
T Consensus 161 iDeS~LTGEs~p-v~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ 239 (972)
T KOG0202|consen 161 IDESSLTGESEP-VSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKK 239 (972)
T ss_pred eecccccCCccc-ccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHHH
Confidence 9998 33 3332 135689999999999999999999999999999999999888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--------------hHHHHH-------HhhccccchHHHHHHHHHHHHHHhhcccc
Q 043535 246 VRKLTSLVDLIGLAITFSGLLMIL--------------DLNAVV-------NLIIPEGLPLAVTVTIAYSMKRLMIDHAM 304 (881)
Q Consensus 246 ~~~~~~~~~~i~l~~~~~~~~~~~--------------~~~~~l-------~i~iP~~L~~~~~~~~~~~~~~l~~~~il 304 (881)
++++...+..+..++++.++++.. .....+ ..+||+|||..++++++.|.+||+|++++
T Consensus 240 ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaI 319 (972)
T KOG0202|consen 240 LDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAI 319 (972)
T ss_pred HHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhh
Confidence 999999998555555555554411 111121 22399999999999999999999999999
Q ss_pred ccCchhhhhccceEEEEecCccccccCceEEeec-----------------------------C------CCCChHHHHH
Q 043535 305 VRKLSACETMGSATVICTDKTGTLTLNQMKGAAD-----------------------------H------SNIAPKVVEL 349 (881)
Q Consensus 305 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~-----------------------------~------~~~~~~~~~~ 349 (881)
||++.++|+||.+++||+|||||||+|+|.+.+. . ....+. ...
T Consensus 320 VRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~-l~~ 398 (972)
T KOG0202|consen 320 VRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL-LQE 398 (972)
T ss_pred hhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH-HHH
Confidence 9999999999999999999999999999998874 0 001222 333
Q ss_pred HHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhh---------------hhhcceEEEEecCCCC
Q 043535 350 IQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQ---------------IRQSCVILQVEAFNSH 414 (881)
Q Consensus 350 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~---------------~~~~~~~~~~~~F~s~ 414 (881)
+....++|+.+.+...+. + .++..|.|+|.||..++. ++++.... ..+.++...++||+|+
T Consensus 399 l~~i~~lCNda~v~~~~~-~--~~~~~G~pTE~AL~vlae-Km~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssd 474 (972)
T KOG0202|consen 399 LAEICALCNDATVEYNDA-D--CYEKVGEPTEGALIVLAE-KMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSD 474 (972)
T ss_pred HHHHHHhhhhhhhhcCch-h--hHHhcCCchHHHHHHHHH-HcCCCcchhhcccccccccchhHHHHhhhheeEeecccc
Confidence 444556666666543222 2 456689999999999887 77764422 2234566799999999
Q ss_pred CceEEEEEeeCCC-CeEEEEEeCCHHHHHHhccccccCCC-ceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC--
Q 043535 415 RKQSRVMMRKKAD-NTVHVHWKGAAEIILAMCSSYYDASG-NVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV-- 490 (881)
Q Consensus 415 ~k~~sviv~~~~~-~~~~l~~KGa~e~i~~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~-- 490 (881)
||+|+|.+..+.+ ..+.+|+|||+|.|+++|++++..+| ...|+++..|+.+.+...+++.+|+||+++|++..+.
T Consensus 475 rK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~ 554 (972)
T KOG0202|consen 475 RKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV 554 (972)
T ss_pred cceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC
Confidence 9999999997665 35789999999999999988887666 5589999999999999999999999999999997763
Q ss_pred ---------CcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------
Q 043535 491 ---------PEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------- 553 (881)
Q Consensus 491 ---------~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------- 553 (881)
+.+...|+||+|+|++++.||||++++++|+.|+++||+|.|+|||+.+||.+||+++|+...
T Consensus 555 ~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~ 634 (972)
T KOG0202|consen 555 PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMA 634 (972)
T ss_pred hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccc
Confidence 224567899999999999999999999999999999999999999999999999999999765
Q ss_pred ----hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhc
Q 043535 554 ----EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESS 629 (881)
Q Consensus 554 ----~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~a 629 (881)
+++.+++++..+...+..+|+|++|++|.++|+.||++|+.|+|+|||.||+|+||.||+|||||.+|++++|++|
T Consensus 635 ~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 635 LTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred cchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 7888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccC
Q 043535 630 DIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQ 709 (881)
Q Consensus 630 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~ 709 (881)
|+|+.||||++|+.++++||.+|+|+++++.|.++.|+..+.+.++++.+..+.|+.|+|+||+|+++|.+|+-+|++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH---HHhh-cc----------------ccCC-----Ccccc
Q 043535 710 PTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTL---LFKG-ES----------------VLGV-----NENVK 764 (881)
Q Consensus 710 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~----------------~~~~-----~~~~~ 764 (881)
|++++|++||++++.++++...+++++..++|........ ++.. .. +++. .....
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~ 874 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCP 874 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhccccc
Confidence 9999999999999999999999999998888776533222 2211 00 0000 02234
Q ss_pred hhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHH--HHHhhhhhcCCCCChhhHHHHHHHHHH
Q 043535 765 DTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEILKKFADTEGLNWIQWGSCIGIAAI 842 (881)
Q Consensus 765 ~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~~~~~~~~~~~ 842 (881)
.|++|.++++..+||.+++|+.+..-|..++|+|+||.+++++++++|+++ +++++..|+++||++.+|++++.+++.
T Consensus 875 ~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~ 954 (972)
T KOG0202|consen 875 LTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSP 954 (972)
T ss_pred ceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhh
Confidence 599999999999999999998655555559999999999999999988755 578999999999999999999999999
Q ss_pred HHHHHHHHHhccc
Q 043535 843 SWPIGWFVKCIPV 855 (881)
Q Consensus 843 ~~~~~~l~k~~~~ 855 (881)
.++++|++|++.|
T Consensus 955 V~i~dEilK~~~R 967 (972)
T KOG0202|consen 955 VIIVDEILKFIAR 967 (972)
T ss_pred hhhHHHHHHHHHH
Confidence 9999999999987
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-129 Score=1200.39 Aligned_cols=838 Identities=41% Similarity=0.685 Sum_probs=731.8
Q ss_pred ccccCHHHHHHHHhh-CChhHHHhhCCHHHHHHHhCCCCCCCCC--hhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHh
Q 043535 7 KTDIDPKTLIEIVKQ-KNLDLLQQFGGTGAVATALQTDIHGGID--GSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTF 83 (881)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~GLs--~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f 83 (881)
-|.+..++++++.+. ++.+.+++|++++++++.|++|.++||| ++| |++|+++||+|+++.++.+++|++++++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~e--v~~r~~~yG~N~l~~~~~~s~~~~~~~~f 94 (941)
T TIGR01517 17 GFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSST--LERREKVYGKNELPEKPPKSFLQIVWAAL 94 (941)
T ss_pred CCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence 467889999998866 4678899999999999999999999999 666 99999999999999998899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHH--------------H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeC
Q 043535 84 KSFTVLILFVCAILSLAFG--------------L----NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRN 145 (881)
Q Consensus 84 ~~~~~~~ll~~ail~~~~~--------------~----~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd 145 (881)
++|++++++++++++++.+ | .++++++++.+++++.+|+++++.++ +++..++.+++|+||
T Consensus 95 ~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~-l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 95 SDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQ-LNREKSAQKIAVIRG 173 (941)
T ss_pred hCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHhccCCCceEEEEC
Confidence 9999999999999999854 2 33455566677888999999999888 666555679999999
Q ss_pred CEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC------CccccccCCCCceeecccEEeeCceeEEEEEE
Q 043535 146 KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAV 219 (881)
Q Consensus 146 g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes------~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~t 219 (881)
|++++|+++||||||+|.+++||+|||||++++|+.+.|||| .| +.|.....|++|+||.+.+|++.++|++|
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~p-v~K~~~~~n~v~~GT~v~~G~~~~iV~~t 252 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDP-IKKGAPKDSFLLSGTVVNEGSGRMLVTAV 252 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCc-ccccCCCCceEEeCCeEEeeEEEEEEEEe
Confidence 999999999999999999999999999999999977799998 34 44544455679999999999999999999
Q ss_pred eccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------------hHH-------
Q 043535 220 GMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL--------------------DLN------- 272 (881)
Q Consensus 220 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~--------------------~~~------- 272 (881)
|.+|+.||+.+.+.+.+ +++|+++.++++.+.+..++++++++.+++++ ++.
T Consensus 253 G~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 331 (941)
T TIGR01517 253 GVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAV 331 (941)
T ss_pred CCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHH
Confidence 99999999999887654 56799999999999888777666555444321 111
Q ss_pred HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCC-----------
Q 043535 273 AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSN----------- 341 (881)
Q Consensus 273 ~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~----------- 341 (881)
.++.++|||+||++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|++.++...
T Consensus 332 ~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 411 (941)
T TIGR01517 332 TIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLR 411 (941)
T ss_pred HHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccc
Confidence 122344999999999999999999999999999999999999999999999999999999998875211
Q ss_pred -CChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEE
Q 043535 342 -IAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRV 420 (881)
Q Consensus 342 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sv 420 (881)
..+...+.+..++++|+.+.... +. ..+.+..|||+|.|+++++. +.+.+....+..+++++.+||+|++|+|++
T Consensus 412 ~~~~~~~~~l~~~~~~~s~~~~~~-~~--~~~~~~~g~p~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~~k~msv 487 (941)
T TIGR01517 412 NVPKHVRNILVEGISLNSSSEEVV-DR--GGKRAFIGSKTECALLGFLL-LLGRDYQEVRAEEKVVKIYPFNSERKFMSV 487 (941)
T ss_pred cCCHHHHHHHHHHHHhCCCCcccc-CC--CCccccCCCccHHHHHHHHH-HcCCCHHHHHhhchhccccccCCCCCeEEE
Confidence 11223344555666665543221 11 11345689999999999987 677777666677888999999999999999
Q ss_pred EEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc---ccccc
Q 043535 421 MMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE---EELNE 497 (881)
Q Consensus 421 iv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~---~~~~e 497 (881)
+++.+++ ++++++|||||.|+++|+.+...+|...++++ .++.+.+..++++++|+|++++|||.++.++ .+..|
T Consensus 488 v~~~~~~-~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e 565 (941)
T TIGR01517 488 VVKHSGG-KVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPN 565 (941)
T ss_pred EEEeCCC-cEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccc
Confidence 9987544 48999999999999999986655677777777 7888999999999999999999999886422 23347
Q ss_pred cCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------hhhcCCHHHHHHHHhh
Q 043535 498 ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--------EFRNYTEEEKMEKVEK 569 (881)
Q Consensus 498 ~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------~~~~~~~~~~~~~~~~ 569 (881)
+|++|+|+++++||+|++++++|++|+++|++++|+|||++.||.++|+++|+.++ +++.++++++.+.+.+
T Consensus 566 ~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~ 645 (941)
T TIGR01517 566 GGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPK 645 (941)
T ss_pred cCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhcc
Confidence 89999999999999999999999999999999999999999999999999999752 6778888999999999
Q ss_pred heeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhH
Q 043535 570 IYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGR 649 (881)
Q Consensus 570 ~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR 649 (881)
..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||.+|++.|+++||+++.++++..+++++++||
T Consensus 646 ~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR 725 (941)
T TIGR01517 646 LRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGR 725 (941)
T ss_pred CeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccH
Q 043535 650 CVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITN 729 (881)
Q Consensus 650 ~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~ 729 (881)
++|+|+++++.|.+++|+..+++.+++.++++++|++++|++|+|+++|.+|++++++|+|++++|++||++++++++++
T Consensus 726 ~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~ 805 (941)
T TIGR01517 726 NVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISR 805 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCC---------cccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHH
Q 043535 730 VMWRNLLAQAFYQIAVLLTLLFKGESVLGVN---------ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKS 800 (881)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~ 800 (881)
.+|..++.++++++++.+++++.+..+++.. ....+|++|.+++++|++|.+++|+.+..++|+++++|++
T Consensus 806 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~ 885 (941)
T TIGR01517 806 SMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRI 885 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHH
Confidence 9999999999999988777766554444321 2457899999999999999999998665578888899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 801 FLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
++.+++++++++++++++++.+|++.|+++.+|+++++++++.+++.++.|.++.
T Consensus 886 ~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 886 FVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999863
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-126 Score=1167.62 Aligned_cols=819 Identities=25% Similarity=0.364 Sum_probs=686.7
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHH
Q 043535 29 QFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG-LNLFI 107 (881)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~-~~~~~ 107 (881)
+-.+++++++.|+||..+|||++| |++|+++||+|+++.++.+++|..+++||++|++++++++++++++.+ +...+
T Consensus 8 ~~~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~~~~~~ 85 (1053)
T TIGR01523 8 FSDIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHDWIEGG 85 (1053)
T ss_pred hhCCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 445889999999999989999998 999999999999999988999999999999999999999999999887 34444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeee
Q 043535 108 AVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQ 185 (881)
Q Consensus 108 ~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vd 185 (881)
+++++++++++..++||+++++.++++++ ..+++|+|||++++|+++||||||||.+++||+|||||++++++++.||
T Consensus 86 iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VD 165 (1053)
T TIGR01523 86 VISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTD 165 (1053)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCceEEE
Confidence 45555556666666666666666665543 3489999999999999999999999999999999999999999999999
Q ss_pred cC------CccccccC-------------CCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCC---------
Q 043535 186 ES------DHNVEVNS-------------SQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTS--------- 237 (881)
Q Consensus 186 es------~~~v~~~~-------------~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~--------- 237 (881)
|| .| +.|.. ++.|++|+||.|.+|+++++|++||.+|++|++.+.+...+.
T Consensus 166 ES~LTGES~p-V~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~ 244 (1053)
T TIGR01523 166 EALLTGESLP-VIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDD 244 (1053)
T ss_pred chhhcCCCCc-eeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccccccccc
Confidence 98 44 44431 134789999999999999999999999999999997753211
Q ss_pred --------------------------ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hH-H-------HHHHhhcccc
Q 043535 238 --------------------------EWTLLKARVRKLTSLVDLIGLAITFSGLLMIL-DL-N-------AVVNLIIPEG 282 (881)
Q Consensus 238 --------------------------~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~-~~-~-------~~l~i~iP~~ 282 (881)
.+||+|+.++++...+..+++++++++++... +. . +++..++|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~av~l~Va~VPeg 324 (1053)
T TIGR01523 245 PNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLAISIIPES 324 (1053)
T ss_pred cccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHcccc
Confidence 24999999999999998888888777765532 11 1 1223339999
Q ss_pred chHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCC-------------CC------
Q 043535 283 LPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSN-------------IA------ 343 (881)
Q Consensus 283 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~-------------~~------ 343 (881)
||+.++++++.+++||+++|++||+++++|+||++++||+|||||||+|+|++.+.... ..
T Consensus 325 Lp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~ 404 (1053)
T TIGR01523 325 LIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNV 404 (1053)
T ss_pred hHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999998764100 00
Q ss_pred ---------------------------------------hHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHH
Q 043535 344 ---------------------------------------PKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAI 384 (881)
Q Consensus 344 ---------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al 384 (881)
++....+.....+|+.+.+...+.++ .+...|||+|.||
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~--~~~~~GdptE~AL 482 (1053)
T TIGR01523 405 SGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATD--CWKAHGDPTEIAI 482 (1053)
T ss_pred ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCC--ceeeCcCccHHHH
Confidence 00112344455667665543211111 3356799999999
Q ss_pred HhcccccCCCChh------hh-------------------hhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHH
Q 043535 385 LSWPILGMSMDME------QI-------------------RQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAE 439 (881)
Q Consensus 385 ~~~~~~~~~~~~~------~~-------------------~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e 439 (881)
++++. +.|.+.. .. +..+++++.+||+|+||||+++++.++++++++|+|||||
T Consensus 483 l~~a~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe 561 (1053)
T TIGR01523 483 HVFAK-KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFE 561 (1053)
T ss_pred HHHHH-HcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChH
Confidence 99987 6665321 11 2347899999999999999999987655568899999999
Q ss_pred HHHHhccccccCCC-ceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc------------ccccccCceeeeec
Q 043535 440 IILAMCSSYYDASG-NVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE------------EELNEENLILLGLL 506 (881)
Q Consensus 440 ~i~~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~------------~~~~e~~l~~lG~i 506 (881)
.|+++|+++...+| ...+++++.++.+.+..++++++|+||+++|||+++..+ ++..|+|++|+|++
T Consensus 562 ~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~ 641 (1053)
T TIGR01523 562 RIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLI 641 (1053)
T ss_pred HHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEE
Confidence 99999997655444 467899999999999999999999999999999886421 23468999999999
Q ss_pred cccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------------------hhhcCCHHHHHHHHh
Q 043535 507 GIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------------EFRNYTEEEKMEKVE 568 (881)
Q Consensus 507 ~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------~~~~~~~~~~~~~~~ 568 (881)
+++||+|++++++|++|+++||+|+|+|||++.||.++|+++||... +++.++++++.+...
T Consensus 642 ~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~ 721 (1053)
T TIGR01523 642 GIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKA 721 (1053)
T ss_pred eeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999631 456677888888888
Q ss_pred hheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHh
Q 043535 569 KIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWG 648 (881)
Q Consensus 569 ~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 648 (881)
+..+|||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|++.++++||+++.++++.++++++++|
T Consensus 722 ~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~g 801 (1053)
T TIGR01523 722 LCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEG 801 (1053)
T ss_pred cCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999998789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCC
Q 043535 649 RCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG-----KNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLT 723 (881)
Q Consensus 649 R~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~-----~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~ 723 (881)
|++|+|+++++.|.+++|+..+++.+++.++.. +.|++++|++|+|+++|.+|++++++|+|++++|++||+.++
T Consensus 802 R~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~ 881 (1053)
T TIGR01523 802 RRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNE 881 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCC
Confidence 999999999999999999999999998888742 479999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHh---hc--cc--------cCC---CcccchhHHHHHHHHHHHHhhHhhhccc
Q 043535 724 EPLITNVMWRNLLAQAFYQIAVLLTLLFK---GE--SV--------LGV---NENVKDTMIFNTFVLCQVFNEFNARKLE 787 (881)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~--------~~~---~~~~~~t~~f~~~v~~~~~~~~~~r~~~ 787 (881)
++++++.++..++..+++.++..+..+++ +. .. ++. +...++|++|.+++++|+++.+++|+.+
T Consensus 882 ~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~ 961 (1053)
T TIGR01523 882 VGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFD 961 (1053)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999998988888877665544431 10 00 000 1235789999999999999999999854
Q ss_pred cccccc----------------cCcchHHHHHHHHHHHHHHHHH--HHHhhh-hhcCCCCChhhHHHHHHHHHHHHHHHH
Q 043535 788 KKNVFK----------------GIHKNKSFLGIIGITIVLQVVM--VEILKK-FADTEGLNWIQWGSCIGIAAISWPIGW 848 (881)
Q Consensus 788 ~~~~~~----------------~~~~n~~~~~~~~~~~~~~~~~--~~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~ 848 (881)
.++|+ +.|+|+++++++++++++++++ +|+++. +|++.|++| .|+++++.+++.+++.+
T Consensus 962 -~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e 1039 (1053)
T TIGR01523 962 -NSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAE 1039 (1053)
T ss_pred -hhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHH
Confidence 33332 3679999999888888877544 577875 999999997 89999999999999999
Q ss_pred HHHhccc
Q 043535 849 FVKCIPV 855 (881)
Q Consensus 849 l~k~~~~ 855 (881)
++|++.|
T Consensus 1040 ~~K~~~r 1046 (1053)
T TIGR01523 1040 IWKCGKR 1046 (1053)
T ss_pred HHHHHHH
Confidence 9999875
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-123 Score=1142.01 Aligned_cols=822 Identities=25% Similarity=0.341 Sum_probs=694.3
Q ss_pred HhhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-----
Q 043535 28 QQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG----- 102 (881)
Q Consensus 28 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~----- 102 (881)
++-.+.+++++.|++|..+|||++| +++|+++||+|+++.++.+++|+.++++|++|++++++++++++++..
T Consensus 17 ~~~~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~ 94 (997)
T TIGR01106 17 DHKLSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAS 94 (997)
T ss_pred chhCCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc
Confidence 4556999999999999999999998 999999999999999888999999999999999999999999977652
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeec
Q 043535 103 ---------LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVP 171 (881)
Q Consensus 103 ---------~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vP 171 (881)
+...++++++++++++.+++++++.++.++++.+ ..+++|+|||++++|+++||||||+|.+++||+||
T Consensus 95 ~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IP 174 (997)
T TIGR01106 95 TEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIP 174 (997)
T ss_pred cCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEe
Confidence 3344566777788888888899888887777755 34899999999999999999999999999999999
Q ss_pred cceeEEeccceeeecC----CccccccCC----------CCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCC
Q 043535 172 ADGIFLDGHSLQIQES----DHNVEVNSS----------QNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTS 237 (881)
Q Consensus 172 aD~~ll~g~~l~vdes----~~~v~~~~~----------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 237 (881)
|||++++|+++.|||| |+ .|+.+. .+|++|+||.|.+|++.++|++||.+|..|++.+.+...+.
T Consensus 175 aD~~il~~~~l~VdeS~LTGES-~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 253 (997)
T TIGR01106 175 ADLRIISAQGCKVDNSSLTGES-EPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLEN 253 (997)
T ss_pred eeEEEEEccCcEEEccccCCCC-CceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhccc
Confidence 9999999988899998 32 333322 23589999999999999999999999999999998887778
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHHH-------HHHhhccccchHHHHHHHHHHHHHHhhcccccc
Q 043535 238 EWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----DLNA-------VVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVR 306 (881)
Q Consensus 238 ~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----~~~~-------~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 306 (881)
+++|+++.++++.+.+..+++++++++++++. ++.. ++..+|||+||++++++++.++++|+++|+++|
T Consensus 254 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk 333 (997)
T TIGR01106 254 GKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVK 333 (997)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEec
Confidence 88999999999999998888777776665543 2221 123339999999999999999999999999999
Q ss_pred CchhhhhccceEEEEecCccccccCceEEeecCCC----------------CC--hHHHHHHHHHhhhccccceeeccCC
Q 043535 307 KLSACETMGSATVICTDKTGTLTLNQMKGAADHSN----------------IA--PKVVELIQQGFALNTTAGFYKRTSG 368 (881)
Q Consensus 307 ~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~----------------~~--~~~~~~l~~~~~~~~~~~~~~~~~~ 368 (881)
+++++|+||++|++|||||||||+|+|++.+...+ .+ ....+.+....++|+++.......+
T Consensus 334 ~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~ 413 (997)
T TIGR01106 334 NLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQEN 413 (997)
T ss_pred CcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCC
Confidence 99999999999999999999999999998875210 00 1223345556777776654321111
Q ss_pred -CCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeC--CCCeEEEEEeCCHHHHHHhc
Q 043535 369 -SGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKK--ADNTVHVHWKGAAEIILAMC 445 (881)
Q Consensus 369 -~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~--~~~~~~l~~KGa~e~i~~~c 445 (881)
.....+..|||+|.|+++++. ..+.+....+..+++++.+||+|+||+|+++++.. +++++++|+|||||.|+++|
T Consensus 414 ~~~~~~~~~gdp~E~ALl~~a~-~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c 492 (997)
T TIGR01106 414 VPILKRAVAGDASESALLKCIE-LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492 (997)
T ss_pred CcccccccCcChHHHHHHHHHH-HhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHh
Confidence 011235679999999999987 45556666777899999999999999999988643 23468899999999999999
Q ss_pred cccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcc-----------cccccCceeeeeccccCCCCc
Q 043535 446 SSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEE-----------ELNEENLILLGLLGIKDPCRP 514 (881)
Q Consensus 446 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~-----------~~~e~~l~~lG~i~~~D~~r~ 514 (881)
+++. .+|...+++++.++.+.+..++++++|+||+++|||+++..+. +..|+|++|+|+++++||+|+
T Consensus 493 ~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 493 SSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 9776 4678889999999999999999999999999999998854211 123889999999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------------------------------hhhcCCHHH
Q 043535 515 GLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--------------------------------EFRNYTEEE 562 (881)
Q Consensus 515 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------------------------~~~~~~~~~ 562 (881)
+++++|++|+++|++++|+|||++.+|.++|+++|+..+ +++.+++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~e 651 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQ 651 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHH
Confidence 999999999999999999999999999999999999532 344566777
Q ss_pred HHHHHhhhe--eeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH
Q 043535 563 KMEKVEKIY--VMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT 640 (881)
Q Consensus 563 ~~~~~~~~~--v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 640 (881)
+.+.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|++.++++||+++.+|+|.+
T Consensus 652 l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 652 LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 888887654 999999999999999999999999999999999999999999999997789999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCC
Q 043535 641 AVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPV 720 (881)
Q Consensus 641 i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~ 720 (881)
+++++++||++|.|+++++.|.++.|+..+++.+++.++..++|++++|++|+|+++|.+|++++++|+|++++|++||+
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCccHHHHHHHH-HHHHHHHHHHHHHHHhhcc--------ccCC--------------C-------------ccc
Q 043535 721 RL-TEPLITNVMWRNLL-AQAFYQIAVLLTLLFKGES--------VLGV--------------N-------------ENV 763 (881)
Q Consensus 721 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~--------------~-------------~~~ 763 (881)
.+ ..+++++.++..++ ..++++++..++.+++... .++. . ...
T Consensus 812 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (997)
T TIGR01106 812 NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFT 891 (997)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhh
Confidence 85 67899987776543 3465665544433322110 1110 0 014
Q ss_pred chhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHH--HHHhhhhhcCCCCChhhHHHHHHHHH
Q 043535 764 KDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEILKKFADTEGLNWIQWGSCIGIAA 841 (881)
Q Consensus 764 ~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~~~~~~~~~~ 841 (881)
++|++|.+++++|++|.+++|+ .+.++|++.++|++++.++++.+++++++ +|+++.+|++.|+++.+|+.++++++
T Consensus 892 ~~t~~f~~~v~~q~~~~~~~R~-~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 970 (997)
T TIGR01106 892 CHTAFFVSIVVVQWADLIICKT-RRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSL 970 (997)
T ss_pred hhHHHHHHHHHHHHHHHHHhcc-CcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence 6899999999999999999998 45577764489998888888777776554 56689999999999999999999999
Q ss_pred HHHHHHHHHHhccc
Q 043535 842 ISWPIGWFVKCIPV 855 (881)
Q Consensus 842 ~~~~~~~l~k~~~~ 855 (881)
+.+++.++.|++.|
T Consensus 971 ~~~~~~~~~k~~~r 984 (997)
T TIGR01106 971 LIFVYDEIRKLIIR 984 (997)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998876
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-122 Score=1127.16 Aligned_cols=801 Identities=31% Similarity=0.477 Sum_probs=684.1
Q ss_pred CCHHHHHHHhCCCCCCCCC-hhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHh-hHHHHHHHHHHHHHHHHHH-H----
Q 043535 31 GGTGAVATALQTDIHGGID-GSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTF-KSFTVLILFVCAILSLAFG-L---- 103 (881)
Q Consensus 31 ~~~~~~~~~l~~~~~~GLs-~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f-~~~~~~~ll~~ail~~~~~-~---- 103 (881)
.+++++++.|++|..+||| ++| +++|+++||+|+++.++.+++|+.++++| ++|++++++++++++++.+ +
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~~~~~~ 84 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNIDDAV 84 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcchhhHH
Confidence 4899999999999999999 767 99999999999999988899999999999 9999999999999999887 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEecccee
Q 043535 104 NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQ 183 (881)
Q Consensus 104 ~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~ 183 (881)
.++++++++..++.+.+++.++..++ +.++ .+.+++|+|||++++|+++||||||+|.+++||+|||||++++|+++.
T Consensus 85 ~i~~~i~~~~~i~~~qe~~a~~~l~~-L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~ 162 (884)
T TIGR01522 85 SITLAILIVVTVGFVQEYRSEKSLEA-LNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLS 162 (884)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHH-Hhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCceE
Confidence 22223333334444444444444333 3222 245899999999999999999999999999999999999999998889
Q ss_pred eecC----CccccccCCC--------------CceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHH
Q 043535 184 IQES----DHNVEVNSSQ--------------NPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245 (881)
Q Consensus 184 vdes----~~~v~~~~~~--------------~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 245 (881)
|||| |+ .|+.+.. +|++|+||.|.+|+++++|++||.+|..|++.+.+.+.+..++|+++.
T Consensus 163 VDES~LTGES-~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~ 241 (884)
T TIGR01522 163 IDESNLTGET-TPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKS 241 (884)
T ss_pred EEcccccCCC-cceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHH
Confidence 9998 32 4433322 368999999999999999999999999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhc
Q 043535 246 VRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314 (881)
Q Consensus 246 ~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~l 314 (881)
+++++.++.+++++++++.+++.+ ++. .++.++|||+||++++++++.++++|+++|+++|+++++|+|
T Consensus 242 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~L 321 (884)
T TIGR01522 242 MDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETL 321 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhc
Confidence 999999887776554444443322 222 222344999999999999999999999999999999999999
Q ss_pred cceEEEEecCccccccCceEEeecCCCCC---------------------------hHHHHHHHHHhhhccccceeeccC
Q 043535 315 GSATVICTDKTGTLTLNQMKGAADHSNIA---------------------------PKVVELIQQGFALNTTAGFYKRTS 367 (881)
Q Consensus 315 g~v~~i~~DKTGTLT~~~m~v~~~~~~~~---------------------------~~~~~~l~~~~~~~~~~~~~~~~~ 367 (881)
|++|++|||||||||+|+|++.+...... +...+.+....++|+.+.... ++
T Consensus 322 g~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~ 400 (884)
T TIGR01522 322 GSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRN-EA 400 (884)
T ss_pred cCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecC-CC
Confidence 99999999999999999999887521100 001222333445555544321 11
Q ss_pred CCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccc
Q 043535 368 GSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSS 447 (881)
Q Consensus 368 ~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~ 447 (881)
....|||+|.|+++++. +.+.+ ..+..++.++.+||+|+||+|+++++...++++++++||+||.|+++|++
T Consensus 401 -----~~~~g~p~e~All~~~~-~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~ 472 (884)
T TIGR01522 401 -----DTLLGNPTDVALIELLM-KFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTY 472 (884)
T ss_pred -----CCcCCChHHHHHHHHHH-HcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhh
Confidence 13458999999999887 55543 33456788999999999999999998765566899999999999999998
Q ss_pred cccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCC
Q 043535 448 YYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAG 527 (881)
Q Consensus 448 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~G 527 (881)
+...+|...+++++.++.+.+..++++++|+|++++||+.+ +.+++|+|+++++||+||+++++|++|+++|
T Consensus 473 ~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~G 544 (884)
T TIGR01522 473 YQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGG 544 (884)
T ss_pred hhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCC
Confidence 87666777888888899999999999999999999999875 4689999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCch--------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEc
Q 043535 528 VNIKMITGDNIFTAKAIATQCGILKP--------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTG 599 (881)
Q Consensus 528 i~v~~~TGd~~~~a~~ia~~~gi~~~--------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iG 599 (881)
++++|+|||++.+|.++|+++|+... ++++++++++.+.+.+..+|+|++|+||.++|+.+|+.|+.|+|+|
T Consensus 545 i~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvG 624 (884)
T TIGR01522 545 VRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTG 624 (884)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEEC
Confidence 99999999999999999999999752 6677888999999999999999999999999999999999999999
Q ss_pred CCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043535 600 NGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVL 679 (881)
Q Consensus 600 Dg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~ 679 (881)
||.||+||+++||||||||.++++.++++||+++.++++..+.+++++||++|+|+++++.|.++.|+..+++.+++.++
T Consensus 625 DGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 704 (884)
T TIGR01522 625 DGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLM 704 (884)
T ss_pred CCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 99999999999999999986789999999999999999999999999999999999999999999999999998888888
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 043535 680 VGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGV 759 (881)
Q Consensus 680 ~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (881)
..+.|++++|++|+|++++.+|++++++|+|++++|++||++++++++++.+|..++.+++++++..+++++.... .+.
T Consensus 705 ~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 783 (884)
T TIGR01522 705 GFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQ-DGV 783 (884)
T ss_pred cCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 8899999999999999999999999999999999999999999999999999999999999988776655543211 121
Q ss_pred CcccchhHHHHHHHHHHHHhhHhhhccccccccc-cCcchHHHHHHHHHHHHHHHHHH--HHhhhhhcCCCCChhhHHHH
Q 043535 760 NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFK-GIHKNKSFLGIIGITIVLQVVMV--EILKKFADTEGLNWIQWGSC 836 (881)
Q Consensus 760 ~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~~~~~ 836 (881)
....++|++|.+++++|++|.+++|+. +.++|+ ++++|++++.+++++++++++++ |+++.+|++.|+++.+|+.+
T Consensus 784 ~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~ 862 (884)
T TIGR01522 784 ITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFL 862 (884)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHccC-CccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 234568999999999999999999984 566676 78899999999999888887665 68899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 043535 837 IGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 837 ~~~~~~~~~~~~l~k~~~~ 855 (881)
++++++.+++.+++|++.|
T Consensus 863 ~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 863 LLITSSVCIVDEIRKKVER 881 (884)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999875
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-122 Score=1118.74 Aligned_cols=794 Identities=33% Similarity=0.473 Sum_probs=680.2
Q ss_pred CHH--HHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-----
Q 043535 32 GTG--AVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGLN----- 104 (881)
Q Consensus 32 ~~~--~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~~----- 104 (881)
+++ ++...++++...|||++| +.+|+++||+|+++..+..++|..++.+|++|++++++++++++++.+..
T Consensus 27 ~~~~~~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~ 104 (917)
T COG0474 27 SVERNELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGV 104 (917)
T ss_pred ccchhhHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCc
Confidence 555 999999999999999988 99999999999999999999999999999999999999999999888741
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccce
Q 043535 105 LFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSL 182 (881)
Q Consensus 105 ~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l 182 (881)
..+.+..+++++++..+.|+.+.++.++++++ ..+++|+|||++++|+++||||||||.+++||+||||+++++++++
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 22233344444555555566555555555433 4699999999999999999999999999999999999999999999
Q ss_pred eeecC------Ccccccc------------CCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHH
Q 043535 183 QIQES------DHNVEVN------------SSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKA 244 (881)
Q Consensus 183 ~vdes------~~~v~~~------------~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~ 244 (881)
.|||| .| +.|. .++.|++|+||.+.+|++.++|++||.+|+.|++.+.+.......+|+++
T Consensus 185 ~VdEs~LTGES~p-v~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~ 263 (917)
T COG0474 185 EVDESALTGESLP-VEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQR 263 (917)
T ss_pred eEEcccccCCCcc-hhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHH
Confidence 99998 33 3332 14578999999999999999999999999999999999877688999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----h-HHH-HH------HhhccccchHHHHHHHHHHHHHHhhccccccCchhhh
Q 043535 245 RVRKLTSLVDLIGLAITFSGLLMIL----D-LNA-VV------NLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACE 312 (881)
Q Consensus 245 ~~~~~~~~~~~i~l~~~~~~~~~~~----~-~~~-~l------~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e 312 (881)
.++++...+..++++++++++++.. + +.. ++ ..++|++||+.++++++.+.++|+++++++|+++++|
T Consensus 264 ~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE 343 (917)
T COG0474 264 KLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIE 343 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhh
Confidence 9999999999999998888887764 1 222 11 3339999999999999999999999999999999999
Q ss_pred hccceEEEEecCccccccCceEEeecCCCC-----C------hHHHHHHHHHhhhccccceeeccCCCCcceeecCChHH
Q 043535 313 TMGSATVICTDKTGTLTLNQMKGAADHSNI-----A------PKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIE 381 (881)
Q Consensus 313 ~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~-----~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e 381 (881)
+||++|+||||||||||+|+|++.++.... + +.....+...+++||+..... + + ++..|||+|
T Consensus 344 ~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~---~-~--~~~~gdptE 417 (917)
T COG0474 344 TLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEK---N-G--WYQAGDPTE 417 (917)
T ss_pred hccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccc---c-C--ceecCCccH
Confidence 999999999999999999999999874331 1 111223445666777655432 1 1 678999999
Q ss_pred HHHHhcccccCCC--ChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCC
Q 043535 382 KAILSWPILGMSM--DMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLE 459 (881)
Q Consensus 382 ~al~~~~~~~~~~--~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~ 459 (881)
.|+++++. +.|. +....+..+++++.+||+|+||||+++++..+++ +++++|||||.|+++|++. +...+++
T Consensus 418 ~Al~~~a~-~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~-~~~~~KGApe~il~~~~~~----~~~~~~~ 491 (917)
T COG0474 418 GALVEFAE-KLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK-YILFVKGAPEVILERCKSI----GELEPLT 491 (917)
T ss_pred HHHHHHHH-hcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCc-EEEEEcCChHHHHHHhccc----CcccccC
Confidence 99999998 7777 7777888889999999999999999999965554 9999999999999999975 6777889
Q ss_pred hHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcc----cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcC
Q 043535 460 VGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEE----ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITG 535 (881)
Q Consensus 460 ~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~----~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TG 535 (881)
++.++.+.+..++|+++|+||+++|||..+..+. +..|+|++|+|+++|+||||++++++|+.|+++||++||+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 9999999999999999999999999998765332 578999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCch----------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCH
Q 043535 536 DNIFTAKAIATQCGILKP----------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDA 605 (881)
Q Consensus 536 d~~~~a~~ia~~~gi~~~----------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~ 605 (881)
||++||.+||++||+... +++.++++++.+.++++.||||++|+||.++|+.+|++|++|+|+|||.||+
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 999999999999998764 3467788899999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CC
Q 043535 606 PALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGK-NP 684 (881)
Q Consensus 606 ~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~-~p 684 (881)
||||+|||||||+++|+|++|++||+++.++++..+..+++|||++|.|+++++.|.+++|+..+++.+++.+++.+ .|
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p 731 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLP 731 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999998899999999999999999999999999999999999999999999999999999999888877 89
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCC-----
Q 043535 685 LTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGV----- 759 (881)
Q Consensus 685 l~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 759 (881)
+++.|++|+|++++.+|+++++.++|+.+.|++||+.+.++++++..+..++.+..++..+..+..|........
T Consensus 732 ~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 811 (917)
T COG0474 732 LTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLG 811 (917)
T ss_pred HHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 999999999999999999999999999999999999999999999998886666555555443333222111111
Q ss_pred ---CcccchhHHHHHHHHHHHHhhHhhhccccccccc-cCcchHHHHHHHHHHHHHHHHHH--HHhh-hhhcCCCCChhh
Q 043535 760 ---NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFK-GIHKNKSFLGIIGITIVLQVVMV--EILK-KFADTEGLNWIQ 832 (881)
Q Consensus 760 ---~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~~--~~~~-~~f~~~~l~~~~ 832 (881)
......|++|..++++|.++.+.+|.. +.+++. .++.|+.++++++.+++++++.. ++.. ..|...++++..
T Consensus 812 ~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~ 890 (917)
T COG0474 812 LDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFE 890 (917)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHH
Confidence 044578999999999999999999973 455555 56789988888888777766554 4555 689999999888
Q ss_pred HHHHHHHHH
Q 043535 833 WGSCIGIAA 841 (881)
Q Consensus 833 ~~~~~~~~~ 841 (881)
|+.++....
T Consensus 891 ~~~~~~~~~ 899 (917)
T COG0474 891 WLIAIAVAL 899 (917)
T ss_pred HHHHHHHHH
Confidence 988776663
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-119 Score=1090.44 Aligned_cols=791 Identities=23% Similarity=0.306 Sum_probs=655.4
Q ss_pred CCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-------
Q 043535 31 GGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL------- 103 (881)
Q Consensus 31 ~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~------- 103 (881)
.+.+++++.|++|. +|||++| +++|+++||+|+++.++.+++|+.++++|++|++++++++++++++.++
T Consensus 30 ~~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 30 NSLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 38999999999995 7999998 9999999999999999889999999999999999999999999998752
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeC------CEEEEEeccccccCcEEEEcCCCee
Q 043535 104 -----NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRN------KRRQQILLSNVVVGDVICLKIGDQV 170 (881)
Q Consensus 104 -----~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rd------g~~~~I~~~~Lv~GDII~l~~G~~v 170 (881)
...++++++++++++.+++|+++.++.++++++ ..+++|+|| |++++|+++||||||+|.+++||+|
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 344455566667777777777777666666654 348999999 4899999999999999999999999
Q ss_pred ccceeEEeccceeeecC------CccccccC---------------------CCCceeecccEEeeCceeEEEEEEeccc
Q 043535 171 PADGIFLDGHSLQIQES------DHNVEVNS---------------------SQNPFLLSGTKVVDGYGRMLATAVGMNT 223 (881)
Q Consensus 171 PaD~~ll~g~~l~vdes------~~~v~~~~---------------------~~~~~l~aGt~v~~g~~~~~V~~tG~~T 223 (881)
||||++++|+++.|||| .| +.|.. +.+|++|+||.|.+|+++++|++||.+|
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~P-V~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALP-VEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcc-eeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 99999999998899998 34 44432 1247899999999999999999999999
Q ss_pred hhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHH
Q 043535 224 TWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIA 292 (881)
Q Consensus 224 ~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~ 292 (881)
++|++.+.+.+ +..++|+++.++++...+..+++.++.+++++.. ++. +++..+|||+||++++++++
T Consensus 266 ~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 99999998876 5667899999999998877776665555444332 222 22234499999999999999
Q ss_pred HHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcc
Q 043535 293 YSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLE 372 (881)
Q Consensus 293 ~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 372 (881)
.++.+|+++|+++|+++++|+||++|++|||||||||+|+|++.+..........+.+..+ .+++.+ +
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a-~l~s~~-----~------ 412 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLA-WLNSFH-----Q------ 412 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHH-HHhCCC-----C------
Confidence 9999999999999999999999999999999999999999999886322111112223222 223211 1
Q ss_pred eeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCC
Q 043535 373 IELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDAS 452 (881)
Q Consensus 373 ~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~ 452 (881)
...+||+|.|+++++. +.+.+ .....++.++.+||++.+|+|+++++..++ ++++++|||||.|+++|++... +
T Consensus 413 -~~~~~p~e~All~~a~-~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~-~~~~~~KGa~e~il~~c~~~~~-~ 486 (903)
T PRK15122 413 -SGMKNLMDQAVVAFAE-GNPEI--VKPAGYRKVDELPFDFVRRRLSVVVEDAQG-QHLLICKGAVEEMLAVATHVRD-G 486 (903)
T ss_pred -CCCCChHHHHHHHHHH-HcCch--hhhhcCceEEEeeeCCCcCEEEEEEEcCCC-cEEEEECCcHHHHHHhchhhhc-C
Confidence 1257999999999887 44432 223467889999999999999999986544 3789999999999999997654 5
Q ss_pred CceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-----ccccccCceeeeeccccCCCCccHHHHHHHHHhCC
Q 043535 453 GNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-----EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAG 527 (881)
Q Consensus 453 ~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-----~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~G 527 (881)
|...+++++.++.+.+..++++.+|+|++++|||+++..+ .+..|+|++|+|+++++||+||+++++|++|+++|
T Consensus 487 ~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aG 566 (903)
T PRK15122 487 DTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENG 566 (903)
T ss_pred CCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCC
Confidence 6777889999999999999999999999999999876432 12357899999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCc------hhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCC
Q 043535 528 VNIKMITGDNIFTAKAIATQCGILK------PEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNG 601 (881)
Q Consensus 528 i~v~~~TGd~~~~a~~ia~~~gi~~------~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg 601 (881)
|+++|+|||++.||.++|+++||.. .+++.++++++.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||
T Consensus 567 I~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDG 646 (903)
T PRK15122 567 VAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDG 646 (903)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCC
Confidence 9999999999999999999999973 2788899999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043535 602 IKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG 681 (881)
Q Consensus 602 ~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~ 681 (881)
.||+|||++|||||||| +|++.||++||+|+.++|+..+++++++||++|+|++|++.|.++.|+..++..+++.++..
T Consensus 647 vNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~ 725 (903)
T PRK15122 647 INDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIP 725 (903)
T ss_pred chhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999888888777777
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCc
Q 043535 682 KNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE 761 (881)
Q Consensus 682 ~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (881)
+.|+++.|++|+|+++|+ |++++++|+|++++| +||++++.+++++.++...+..+++.+..++++++ ... .+...
T Consensus 726 ~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~~~~ 801 (903)
T PRK15122 726 FLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWF-VFA-ANSVE 801 (903)
T ss_pred cchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-cCcHh
Confidence 789999999999999996 999999999999999 99999999999987775444344333333322222 111 12111
Q ss_pred --ccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHH--HHHHH--hhhhhcCCCCChhhHHH
Q 043535 762 --NVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQV--VMVEI--LKKFADTEGLNWIQWGS 835 (881)
Q Consensus 762 --~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~--~~~~f~~~~l~~~~~~~ 835 (881)
...+|..|.+++++|+++.+++|+.+ .++ |+|++....+++++++++ .++++ ++.+|++.|+++.+|++
T Consensus 802 ~~~~~~t~~f~~l~~~q~~~~~~~R~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~ 876 (903)
T PRK15122 802 MQALFQSGWFIEGLLSQTLVVHMLRTQK-IPF----IQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPW 876 (903)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhCcCC-CCc----CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHH
Confidence 12357789999999999999999842 233 455554444555555554 34555 78999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 043535 836 CIGIAAISWPIGWFVKCIP 854 (881)
Q Consensus 836 ~~~~~~~~~~~~~l~k~~~ 854 (881)
++++++..+++.++.|.+.
T Consensus 877 ~~~~~~~~~~~~e~~k~~~ 895 (903)
T PRK15122 877 LAATLLGYCLVAQGMKRFY 895 (903)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888543
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-118 Score=1081.53 Aligned_cols=787 Identities=22% Similarity=0.310 Sum_probs=644.9
Q ss_pred CHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 043535 32 GTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG-LNLFIAVS 110 (881)
Q Consensus 32 ~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~-~~~~~~i~ 110 (881)
+.+++++.|++++ +|||++| +++|+++||+|+++.++.+++|+.++++|++|++++++++++++++.+ +...++++
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~~~~a~~I~ 129 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATEDLFAAGVIA 129 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 8999999999997 6999988 999999999999999988999999999999999999999999998877 44445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeC------CEEEEEeccccccCcEEEEcCCCeeccceeEEeccce
Q 043535 111 IYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRN------KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSL 182 (881)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rd------g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l 182 (881)
++++++++.+++++++.++.++++.+ ..+++|+|| |++++|+++||||||+|.+++||+|||||++++|+++
T Consensus 130 ~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l 209 (902)
T PRK10517 130 LMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDL 209 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCce
Confidence 66667777777777777766666654 348999999 7899999999999999999999999999999999988
Q ss_pred eeecC----CccccccCCC-------------CceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHH
Q 043535 183 QIQES----DHNVEVNSSQ-------------NPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245 (881)
Q Consensus 183 ~vdes----~~~v~~~~~~-------------~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 245 (881)
.|||| |+ .|+.+.. +|++|+||.|.+|+++++|++||.+|++|++.+.+.+.+.+++|+++.
T Consensus 210 ~VDES~LTGES-~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~ 288 (902)
T PRK10517 210 FVAQASLTGES-LPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQG 288 (902)
T ss_pred EEEecCcCCCC-CceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHH
Confidence 99998 33 4433222 358999999999999999999999999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhc
Q 043535 246 VRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314 (881)
Q Consensus 246 ~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~l 314 (881)
++++++.+..++++++.++++++. ++. +++..+|||+||++++++++.++++|+++|+++|+++++|+|
T Consensus 289 ~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~l 368 (902)
T PRK10517 289 ISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNF 368 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhc
Confidence 999999888887777766655432 222 122334999999999999999999999999999999999999
Q ss_pred cceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCC
Q 043535 315 GSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSM 394 (881)
Q Consensus 315 g~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~ 394 (881)
|++|++|||||||||+|+|++.+.......+..+.+. ..++++.. + ...+||+|.|+++++. ..+
T Consensus 369 g~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~-~a~l~~~~-----~-------~~~~~p~d~All~~a~-~~~- 433 (902)
T PRK10517 369 GAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLH-SAWLNSHY-----Q-------TGLKNLLDTAVLEGVD-EES- 433 (902)
T ss_pred cCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHH-HHHhcCCc-----C-------CCCCCHHHHHHHHHHH-hcc-
Confidence 9999999999999999999998753211111222332 22333211 1 1157999999999875 222
Q ss_pred ChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHH
Q 043535 395 DMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMA 474 (881)
Q Consensus 395 ~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 474 (881)
.....+.++.++.+||+|++|+|+++++..++ .+++++||+||.|+++|+++.. +|...+++++.++.+.+..++++
T Consensus 434 -~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a 510 (902)
T PRK10517 434 -ARSLASRWQKIDEIPFDFERRRMSVVVAENTE-HHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLN 510 (902)
T ss_pred -hhhhhhcCceEEEeeeCCCcceEEEEEEECCC-eEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHH
Confidence 12334567889999999999999999886544 3789999999999999997754 56678888888999999999999
Q ss_pred hcchhhhhhhhccCCCCcc---cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 475 AGSLQCLAFAHKQVPVPEE---ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 475 ~~g~rvl~~a~k~l~~~~~---~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
++|+|++++|||+++..+. ...|+|++|+|+++++||+||+++++|++|+++||+|+|+|||++.||.++|+++||.
T Consensus 511 ~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 511 RQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD 590 (902)
T ss_pred hcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 9999999999998764221 1237899999999999999999999999999999999999999999999999999997
Q ss_pred ch------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHH
Q 043535 552 KP------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVA 625 (881)
Q Consensus 552 ~~------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a 625 (881)
.. +++.++++++.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|.|
T Consensus 591 ~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvA 669 (902)
T PRK10517 591 AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIA 669 (902)
T ss_pred ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHH
Confidence 42 77889999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHh
Q 043535 626 KESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALAL 705 (881)
Q Consensus 626 ~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l 705 (881)
|++||+++.++|+..+++++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|++++
T Consensus 670 keaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al 748 (902)
T PRK10517 670 REAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAI 748 (902)
T ss_pred HHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhh
Confidence 9999999999999999999999999999999999999999999998888887776668999999999999999 689999
Q ss_pred cccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCc----ccchhHHHHHHHHHHHHhhH
Q 043535 706 VTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE----NVKDTMIFNTFVLCQVFNEF 781 (881)
Q Consensus 706 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~t~~f~~~v~~~~~~~~ 781 (881)
++|+|++++|++||+ ++...+.+.+ +..+.+.+...+..++.....++... ...+|..|.+++++|+++.+
T Consensus 749 ~~d~~~~~~m~~p~r-~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~ 823 (902)
T PRK10517 749 PFDNVDDEQIQKPQR-WNPADLGRFM----VFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVH 823 (902)
T ss_pred cCCCCChhhhcCCCC-CCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987 3333333333 33333333222211111111112111 12344569999999999999
Q ss_pred hhhccccccccccCcchHHHHHHHHHHHHHHH--HHHH--HhhhhhcCCCCC--hhhHHHHHHHHHHHHHHHHHHHhcc
Q 043535 782 NARKLEKKNVFKGIHKNKSFLGIIGITIVLQV--VMVE--ILKKFADTEGLN--WIQWGSCIGIAAISWPIGWFVKCIP 854 (881)
Q Consensus 782 ~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~--~~~~~f~~~~l~--~~~~~~~~~~~~~~~~~~~l~k~~~ 854 (881)
++|+.+ . ++|+|++.+..++.++++++ .++| +++.+|++.|++ +..|++++..++. ++.++.|.+.
T Consensus 824 ~~R~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~ 895 (902)
T PRK10517 824 MIRTRR-I----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFY 895 (902)
T ss_pred hhccCC-C----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 999842 2 44567766666666655554 3345 678999999999 6778877766655 5567777654
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-117 Score=1072.02 Aligned_cols=785 Identities=23% Similarity=0.320 Sum_probs=641.2
Q ss_pred CHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 043535 32 GTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-NLFIAVS 110 (881)
Q Consensus 32 ~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~-~~~~~i~ 110 (881)
+++++++.|+++. +|||++| +++|+++||+|+++.++.+++|+.++++|++|++++++++++++++.+. ...++++
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~~iI~ 95 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEATVIIA 95 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHhh
Confidence 8999999999986 6999998 9999999999999998888999999999999999999999999998773 3344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEe------CCEEEEEeccccccCcEEEEcCCCeeccceeEEeccce
Q 043535 111 IYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVR------NKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSL 182 (881)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~R------dg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l 182 (881)
++++++++.+++++++.++.++++++ ..+++|+| ||++++|+++||||||+|.+++||+|||||++++|+++
T Consensus 96 ~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l 175 (867)
T TIGR01524 96 LMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDL 175 (867)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCce
Confidence 55556666666666665555555543 35899999 99999999999999999999999999999999999988
Q ss_pred eeecC------CccccccCC-----------CCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHH
Q 043535 183 QIQES------DHNVEVNSS-----------QNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245 (881)
Q Consensus 183 ~vdes------~~~v~~~~~-----------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 245 (881)
.|||| .| +.|... .+|++|+||.|.+|+++++|++||.+|++|++.+.+.+ +.+++|+++.
T Consensus 176 ~VDES~LTGES~P-V~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~ 253 (867)
T TIGR01524 176 FINQSALTGESLP-VEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKG 253 (867)
T ss_pred EEEcccccCCCCc-ccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHH
Confidence 99998 33 444321 24689999999999999999999999999999999877 6678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhc
Q 043535 246 VRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314 (881)
Q Consensus 246 ~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~l 314 (881)
++++++++..++++++.+.++++. ++. +++..+|||+||++++++++.++++|+++|+++|+++++|+|
T Consensus 254 ~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~l 333 (867)
T TIGR01524 254 VKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNF 333 (867)
T ss_pred HHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhc
Confidence 999999998888777766655432 222 122334999999999999999999999999999999999999
Q ss_pred cceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCC
Q 043535 315 GSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSM 394 (881)
Q Consensus 315 g~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~ 394 (881)
|++|++|||||||||+|+|++.+.......+..+.+.. .++++.. + ...+||+|.|+++++. ..
T Consensus 334 g~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~-a~l~~~~-----~-------~~~~~p~~~Al~~~~~-~~-- 397 (867)
T TIGR01524 334 GAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKM-AWLNSYF-----Q-------TGWKNVLDHAVLAKLD-ES-- 397 (867)
T ss_pred cCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHH-HHHhCCC-----C-------CCCCChHHHHHHHHHH-hh--
Confidence 99999999999999999999988642211112223322 2233211 0 1146899999999876 32
Q ss_pred ChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHH
Q 043535 395 DMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMA 474 (881)
Q Consensus 395 ~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 474 (881)
.....+..++.++.+||+|++|+|++++++.++ .+++++||+||.|+++|+++.. +|...+++++.++.+.+..++++
T Consensus 398 ~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a 475 (867)
T TIGR01524 398 AARQTASRWKKVDEIPFDFDRRRLSVVVENRAE-VTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMN 475 (867)
T ss_pred chhhHhhcCceEEEeccCCCcCEEEEEEEcCCc-eEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHH
Confidence 122334567889999999999999999886544 4789999999999999987644 66777888888889999999999
Q ss_pred hcchhhhhhhhccCCCCcc---cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 475 AGSLQCLAFAHKQVPVPEE---ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 475 ~~g~rvl~~a~k~l~~~~~---~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
.+|+|++++|||+++..+. +..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.
T Consensus 476 ~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 476 RQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGID 555 (867)
T ss_pred hcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 9999999999998865321 1247899999999999999999999999999999999999999999999999999997
Q ss_pred ch------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHH
Q 043535 552 KP------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVA 625 (881)
Q Consensus 552 ~~------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a 625 (881)
.. ++++++++++.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||+ +|++.+
T Consensus 556 ~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvA 634 (867)
T TIGR01524 556 ANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIA 634 (867)
T ss_pred CCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHH
Confidence 42 67788899999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHh
Q 043535 626 KESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALAL 705 (881)
Q Consensus 626 ~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l 705 (881)
|++||+|++++++..+++++++||++|+|+++++.|.++.|+..++..+++.++..+.|++++|++|+|+++| +|++++
T Consensus 635 k~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al 713 (867)
T TIGR01524 635 KEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTL 713 (867)
T ss_pred HHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhh
Confidence 9999999999999999999999999999999999999999999998888887777678999999999999999 699999
Q ss_pred cccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHH----HHHHHHhhccccCC-CcccchhHHHHHHHHHHHHhh
Q 043535 706 VTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAV----LLTLLFKGESVLGV-NENVKDTMIFNTFVLCQVFNE 780 (881)
Q Consensus 706 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~t~~f~~~v~~~~~~~ 780 (881)
++|+|++++|++||+ ++.+.+.+.+ ...|.+.++. ++++++... ..+. .....+|..|.+++++|+++.
T Consensus 714 ~~~~~~~~~m~~p~~-~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~f~~~~~~~~~~~ 787 (867)
T TIGR01524 714 PWDKMDREFLKKPHQ-WEQKGMGRFM----LCIGPVSSIFDIATFLLMWFVFS-ANTVEEQALFQSGWFVVGLLSQTLVV 787 (867)
T ss_pred cCCCCChHhhCCCCC-CChhhHHHHH----HHHHHHHHHHHHHHHHHHHHHhc-ccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999986665 6665443333 3334333222 222222111 0011 012246888999999999999
Q ss_pred HhhhccccccccccCcchHHHHHHHHHHHHHHHHHH--HH--hhhhhcCCCC--ChhhHHHHHHHHHHHHHHHHHHHhcc
Q 043535 781 FNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMV--EI--LKKFADTEGL--NWIQWGSCIGIAAISWPIGWFVKCIP 854 (881)
Q Consensus 781 ~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~--~~~~f~~~~l--~~~~~~~~~~~~~~~~~~~~l~k~~~ 854 (881)
+++|+.+ . ++|+|++.+.+++++++++++.+ ++ ++.+|++.|+ ++..|++++.+++. ++.++.|.+-
T Consensus 788 ~~~R~~~-~----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~ 860 (867)
T TIGR01524 788 HMIRTEK-I----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFY 860 (867)
T ss_pred HhhCcCC-C----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 9999742 2 44568877777777777665543 44 4789999987 55677777766554 5677777553
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-116 Score=1079.19 Aligned_cols=769 Identities=30% Similarity=0.450 Sum_probs=654.0
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeC
Q 043535 79 VVDTFKSFTVLILFVCAILSLAFG-----------LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRN 145 (881)
Q Consensus 79 l~~~f~~~~~~~ll~~ail~~~~~-----------~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rd 145 (881)
+++||++|++++|+++++++++.+ |...+.+++++++++...++++++.++.++++.+ +.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 368999999999999999999885 3334444555556666666666666666666643 458999999
Q ss_pred CEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCC-------------CCceeecccEEe
Q 043535 146 KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSS-------------QNPFLLSGTKVV 208 (881)
Q Consensus 146 g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~-------------~~~~l~aGt~v~ 208 (881)
|++++|+++||||||+|.+++||+|||||++++|+++.|||| |+ .|+.+. .+|++|+||.+.
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES-~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGES-VSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCC-CcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999988899998 22 333322 238899999999
Q ss_pred eCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hH----H--
Q 043535 209 DGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----------DL----N-- 272 (881)
Q Consensus 209 ~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----------~~----~-- 272 (881)
+|++.++|++||.+|+.|++.+++.+.+.+++|+++.+++++..+..+.++++++.++++. ++ .
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYY 239 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 9999999999999999999999998888889999999999999888877776666555431 01 1
Q ss_pred -----HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCC------
Q 043535 273 -----AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSN------ 341 (881)
Q Consensus 273 -----~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~------ 341 (881)
.++..+|||+||++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|++.++...
T Consensus 240 ~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 319 (917)
T TIGR01116 240 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSS 319 (917)
T ss_pred HHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccc
Confidence 111333999999999999999999999999999999999999999999999999999999998775210
Q ss_pred ----------CC----------------hHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCC
Q 043535 342 ----------IA----------------PKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMD 395 (881)
Q Consensus 342 ----------~~----------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~ 395 (881)
.+ +...+.+..+.++|+++.....+... .....|||+|.|+++++. +.|.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~--~~~~~gdp~E~ALl~~~~-~~g~~ 396 (917)
T TIGR01116 320 LNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKG--VYEKVGEATEAALKVLVE-KMGLP 396 (917)
T ss_pred cceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCC--ceeeccChhHHHHHHHHH-HcCCC
Confidence 00 11134455566778776553211111 234468999999999887 66655
Q ss_pred hhh----------------hhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCC
Q 043535 396 MEQ----------------IRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLE 459 (881)
Q Consensus 396 ~~~----------------~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~ 459 (881)
... .++.+++++.+||+|+||||+++++.+ +++++|+|||||.|+++|+++...+|...+++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~--~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~ 474 (917)
T TIGR01116 397 ATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS--TGNKLFVKGAPEGVLERCTHILNGDGRAVPLT 474 (917)
T ss_pred chhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC--CcEEEEEcCChHHHHHhccceecCCCCeeeCC
Confidence 432 245678999999999999999999864 33889999999999999998877668888999
Q ss_pred hHHHHHHHHHHHHHHh-cchhhhhhhhccCCCCc----------ccccccCceeeeeccccCCCCccHHHHHHHHHhCCC
Q 043535 460 VGARERFEQIIQGMAA-GSLQCLAFAHKQVPVPE----------EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV 528 (881)
Q Consensus 460 ~~~~~~~~~~~~~~~~-~g~rvl~~a~k~l~~~~----------~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi 528 (881)
++.++.+.+.++++++ +|+||+++|||.++.++ .+.+|+|++|+|+++++||+|++++++|++||++|+
T Consensus 475 ~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI 554 (917)
T TIGR01116 475 DKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGI 554 (917)
T ss_pred HHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCC
Confidence 9999999999999999 99999999999986421 245689999999999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCCch------------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEE
Q 043535 529 NIKMITGDNIFTAKAIATQCGILKP------------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVA 596 (881)
Q Consensus 529 ~v~~~TGd~~~~a~~ia~~~gi~~~------------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~ 596 (881)
+++|+|||+.++|.++|+++|+..+ +++.+++++......+..+|+|++|+||.++|+.+|+.|++|+
T Consensus 555 ~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va 634 (917)
T TIGR01116 555 RVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVA 634 (917)
T ss_pred EEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEE
Confidence 9999999999999999999999752 4556667777788888899999999999999999999999999
Q ss_pred EEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 597 VTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 597 ~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
|+|||.||+|||++|||||||+ +|++.++++||+++.++++..+.+++++||++|.|+++++.|.+++|+..+++.+++
T Consensus 635 ~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~ 713 (917)
T TIGR01116 635 MTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLT 713 (917)
T ss_pred EecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043535 677 AVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESV 756 (881)
Q Consensus 677 ~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (881)
.++..+.|++++|++|+|++++.+|+++++.++|++++|++||+.++++++++.++..|+..+++++++.+..+++....
T Consensus 714 ~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 793 (917)
T TIGR01116 714 AALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLL 793 (917)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88888899999999999999999999999999999999999999999999999999999999999997754333221110
Q ss_pred cCC-----------------------CcccchhHHHHHHHHHHHHhhHhhhccccccccc-cCcchHHHHHHHHHHHHHH
Q 043535 757 LGV-----------------------NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFK-GIHKNKSFLGIIGITIVLQ 812 (881)
Q Consensus 757 ~~~-----------------------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~ 812 (881)
.+. ....++|++|.+++++|++|.+++|+. +.++|+ ++++|++++.+++++++++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~l~ 872 (917)
T TIGR01116 794 THFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWVNKWLIGAICLSMALH 872 (917)
T ss_pred cCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCccCHHHHHHHHHHHHHH
Confidence 010 123568999999999999999999994 556665 7889999999999988888
Q ss_pred HHH--HHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 813 VVM--VEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 813 ~~~--~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
+++ +|+++.+|++.|++|.+|+++++++++.+++.+++|+++|
T Consensus 873 ~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 873 FLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 776 6889999999999999999999999999999999998863
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-113 Score=948.34 Aligned_cols=843 Identities=25% Similarity=0.349 Sum_probs=716.2
Q ss_pred HHHHHHHHhhCChhHHHhhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHH
Q 043535 12 PKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLIL 91 (881)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~l 91 (881)
++++++.. +++..-+|-.+++|+++++++|..+|||.++ +.+++.+.|+|.+++|+..+-|..|.+|+++-+.+++
T Consensus 25 ~~~l~~~k--~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill 100 (1019)
T KOG0203|consen 25 KKELDDLK--KEVSMDDHKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILL 100 (1019)
T ss_pred hhhHHHHh--hheeeccccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHH
Confidence 34455542 2233335677999999999999999999999 9999999999999999888888889999999999999
Q ss_pred HHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEeCCEEEEEeccc
Q 043535 92 FVCAILSLAFGL--------------NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNS--IQVDVVRNKRRQQILLSN 155 (881)
Q Consensus 92 l~~ail~~~~~~--------------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~--~~v~V~Rdg~~~~I~~~~ 155 (881)
|++++++++.+. ...+++..+++++++..|+|+.+..+..+..++. ..++|+|||+.+.+..+|
T Consensus 101 ~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~ee 180 (1019)
T KOG0203|consen 101 WIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEE 180 (1019)
T ss_pred HHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhh
Confidence 999999988763 1223334455667777888988888878877764 489999999999999999
Q ss_pred cccCcEEEEcCCCeeccceeEEeccceeeecC------Ccccccc--------CCCCceeecccEEeeCceeEEEEEEec
Q 043535 156 VVVGDVICLKIGDQVPADGIFLDGHSLQIQES------DHNVEVN--------SSQNPFLLSGTKVVDGYGRMLATAVGM 221 (881)
Q Consensus 156 Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes------~~~v~~~--------~~~~~~l~aGt~v~~g~~~~~V~~tG~ 221 (881)
||+||+|.++-||+||||.+++++..+.+|+| +| .... .+..|+-|.+|.+++|.++++|++||.
T Consensus 181 lVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP-~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd 259 (1019)
T KOG0203|consen 181 LVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEP-QTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGD 259 (1019)
T ss_pred cccccceeeccCCcccceeEEEEecceeEeccccccccCC-ccCCccccccCchhheeeeeeeeEEecceEEEEEEecCC
Confidence 99999999999999999999999999999987 44 2211 235678999999999999999999999
Q ss_pred cchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHHH----HHHh--h-ccccchHHHHHH
Q 043535 222 NTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----DLNA----VVNL--I-IPEGLPLAVTVT 290 (881)
Q Consensus 222 ~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----~~~~----~l~i--~-iP~~L~~~~~~~ 290 (881)
+|.+|++..........++|++..++++..++...++.+++..|++.+ .+.. ++.+ + +|+||+..++.+
T Consensus 260 ~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~ 339 (1019)
T KOG0203|consen 260 RTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVC 339 (1019)
T ss_pred ceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhh
Confidence 999999999888888999999999999999999998888888776554 2222 1111 2 999999999999
Q ss_pred HHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCC------------------CCChHHHHHHHH
Q 043535 291 IAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHS------------------NIAPKVVELIQQ 352 (881)
Q Consensus 291 ~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~------------------~~~~~~~~~l~~ 352 (881)
+....+||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.-. ...+.....+..
T Consensus 340 LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r 419 (1019)
T KOG0203|consen 340 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSR 419 (1019)
T ss_pred HHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999998511 111334455667
Q ss_pred HhhhccccceeeccCCC-CcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCC--CCe
Q 043535 353 GFALNTTAGFYKRTSGS-GLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKA--DNT 429 (881)
Q Consensus 353 ~~~~~~~~~~~~~~~~~-~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~--~~~ 429 (881)
+.++|+.+.....+.+- ..+....|++.|.||++++. ..-.+....|+.++.+.++||+|.+|..-.+.+..+ +.+
T Consensus 420 ~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e-~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~ 498 (1019)
T KOG0203|consen 420 IATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIE-LILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPR 498 (1019)
T ss_pred HHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHH-HhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcc
Confidence 77888887765422222 13456789999999999987 444455788899999999999999999988877654 345
Q ss_pred EEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-----------cccccc
Q 043535 430 VHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-----------EELNEE 498 (881)
Q Consensus 430 ~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-----------~~~~e~ 498 (881)
+.+.+|||||.++++|+.+.. +|+..|+++..++.+.+...++...|.||++|+++.+++.+ .+..-.
T Consensus 499 ~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~ 577 (1019)
T KOG0203|consen 499 FLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTD 577 (1019)
T ss_pred ceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcch
Confidence 888899999999999998766 78889999999999999999999999999999999998532 234557
Q ss_pred CceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------
Q 043535 499 NLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------------------- 553 (881)
Q Consensus 499 ~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------- 553 (881)
++.|+|++++-||||..+++++.+||++||||+|+|||++.||+++|++.||...
T Consensus 578 nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~ 657 (1019)
T KOG0203|consen 578 NLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAK 657 (1019)
T ss_pred hccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccc
Confidence 8999999999999999999999999999999999999999999999999997653
Q ss_pred -------hhhcCCHHHHHHHHhhhe--eeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHH
Q 043535 554 -------EFRNYTEEEKMEKVEKIY--VMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV 624 (881)
Q Consensus 554 -------~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~ 624 (881)
++.+++.+++++.+.+.. ||||.+|+||..+|+.+|++|.+|+++|||.||+||||+||||||||..|+|+
T Consensus 658 a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv 737 (1019)
T KOG0203|consen 658 AAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 737 (1019)
T ss_pred eEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchH
Confidence 566778888998887654 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHH
Q 043535 625 AKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALA 704 (881)
Q Consensus 625 a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~ 704 (881)
+|++||++++||||.+|+..+++||.+|+|+||.+.|.++.|+..+.+.+++.+++.|.|+.++++|.+++.+|+.|+++
T Consensus 738 sKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiS 817 (1019)
T KOG0203|consen 738 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAIS 817 (1019)
T ss_pred HHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCccccccCCCC-CCCCCccHHHHH-HHHHHHHHHHHHHHHHHHhhccccCC-----------------------
Q 043535 705 LVTEQPTKELMEKPPVR-LTEPLITNVMWR-NLLAQAFYQIAVLLTLLFKGESVLGV----------------------- 759 (881)
Q Consensus 705 l~~~~~~~~~~~~~p~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 759 (881)
|++|+|+.++|+|+|++ .+.++++.+++. .....|.+|++..|+.||......|+
T Consensus 818 LAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~Ds 897 (1019)
T KOG0203|consen 818 LAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDS 897 (1019)
T ss_pred HhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhh
Confidence 99999999999999998 567788877653 44445777776666555433211111
Q ss_pred ---C---------cccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHH--HHHhhhhhcC
Q 043535 760 ---N---------ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEILKKFADT 825 (881)
Q Consensus 760 ---~---------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~ 825 (881)
. +.+.+|..|.+++.+|+.+++.+++ ++.++|+.-++|+.+++++++..++..++ +|.....+++
T Consensus 898 yGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KT-RRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~ 976 (1019)
T KOG0203|consen 898 YGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKT-RRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGM 976 (1019)
T ss_pred ccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhc-chhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhcc
Confidence 0 3456788999999999999999887 67888886699999998888766665444 4667888999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHhcccCCcccccc
Q 043535 826 EGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLSYL 863 (881)
Q Consensus 826 ~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~~~~~~~~~ 863 (881)
.|+.|.+|+..++.+++.|+.++++|++-| ..|=+|.
T Consensus 977 ~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR-~~P~gw~ 1013 (1019)
T KOG0203|consen 977 YPLKFQWWLVAFPFGILIFVYDEVRKLFIR-RYPGGWL 1013 (1019)
T ss_pred CCCCcEEEEecccceeeeeeHHHHHhHhhh-hCCCchh
Confidence 999999999999999999999999999876 3333443
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-108 Score=1022.90 Aligned_cols=751 Identities=22% Similarity=0.299 Sum_probs=610.5
Q ss_pred CCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 043535 45 HGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-NLFIAVSIYISVSASSKYMQ 123 (881)
Q Consensus 45 ~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~-~~~~~i~~~~~i~~~~~~~~ 123 (881)
..|||++| +++|+++||+|+++.+ .+++|+++++++.+|+++++++++++|+..++ ...+.++++++++....+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~~~~~~~~i~~i~~~~~~~~~~~ 213 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLDEYYYYSLCIVFMSSTSISLSVYQ 213 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 46999988 9999999999999986 58999999999999999999999888887763 44444555555566666666
Q ss_pred HHHHHHHHHhhh-cCCceEEEeCCEEEEEeccccccCcEEEEc--CCCeeccceeEEeccceeeecC------Ccccccc
Q 043535 124 NKKFEKLLSKVS-NSIQVDVVRNKRRQQILLSNVVVGDVICLK--IGDQVPADGIFLDGHSLQIQES------DHNVEVN 194 (881)
Q Consensus 124 ~~~~~~~l~~~~-~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~--~G~~vPaD~~ll~g~~l~vdes------~~~v~~~ 194 (881)
+++..+.++++. ++..++|+|||++++|+++||||||+|.++ +|++|||||++++|+ +.|||| .| +.|.
T Consensus 214 ~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~P-v~K~ 291 (1054)
T TIGR01657 214 IRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVP-VLKF 291 (1054)
T ss_pred HHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccc-eecc
Confidence 666555576654 345899999999999999999999999999 999999999999996 599998 33 3332
Q ss_pred C----------------CCCceeecccEEee-------CceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHH
Q 043535 195 S----------------SQNPFLLSGTKVVD-------GYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTS 251 (881)
Q Consensus 195 ~----------------~~~~~l~aGt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~ 251 (881)
. ++++++|+||.|.+ |.+.++|++||.+|..|++.+.+.+++...+++++...++..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~ 371 (1054)
T TIGR01657 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFIL 371 (1054)
T ss_pred cCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHH
Confidence 1 13467999999995 789999999999999999999998888889999999999888
Q ss_pred HHHHHHHHHHHHHHHHHh----h-------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEE
Q 043535 252 LVDLIGLAITFSGLLMIL----D-------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVI 320 (881)
Q Consensus 252 ~~~~i~l~~~~~~~~~~~----~-------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i 320 (881)
.+..++++.++.+++... + ...++++++|++||++++++++.++.||+|+|++||++.++|.+|++|++
T Consensus 372 ~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vi 451 (1054)
T TIGR01657 372 FLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVC 451 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEE
Confidence 777666554444433222 1 22333555999999999999999999999999999999999999999999
Q ss_pred EecCccccccCceEEeecCCCCCh------------HHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcc
Q 043535 321 CTDKTGTLTLNQMKGAADHSNIAP------------KVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWP 388 (881)
Q Consensus 321 ~~DKTGTLT~~~m~v~~~~~~~~~------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~ 388 (881)
|||||||||+|+|++.++...... .....+..+++.||+..... .+..|||+|.|++++.
T Consensus 452 cfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~--------~~~~Gdp~E~al~~~~ 523 (1054)
T TIGR01657 452 CFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLE--------GKLVGDPLDKKMFEAT 523 (1054)
T ss_pred EEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEEC--------CEEecCHHHHHHHHhC
Confidence 999999999999999886321100 11233455667777654321 1568999999999986
Q ss_pred cccCCCChh---h-----------hhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCc
Q 043535 389 ILGMSMDME---Q-----------IRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGN 454 (881)
Q Consensus 389 ~~~~~~~~~---~-----------~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~ 454 (881)
.+....+.+ . ....+++++.+||+|++||||++++..+++++++|+|||||.|+++|++.
T Consensus 524 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------ 597 (1054)
T TIGR01657 524 GWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------ 597 (1054)
T ss_pred CCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------
Confidence 543222100 0 02468899999999999999999998766678899999999999999842
Q ss_pred eecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCC--------cccccccCceeeeeccccCCCCccHHHHHHHHHhC
Q 043535 455 VKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVP--------EEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYA 526 (881)
Q Consensus 455 ~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~--------~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~ 526 (881)
..++++.+.+++++++|+||+++|||+++.. +++..|+|++|+|+++++|++||+++++|++|+++
T Consensus 598 ------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~a 671 (1054)
T TIGR01657 598 ------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRA 671 (1054)
T ss_pred ------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHC
Confidence 2256788899999999999999999998632 24567899999999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCchhh---------------------------------------------------
Q 043535 527 GVNIKMITGDNIFTAKAIATQCGILKPEF--------------------------------------------------- 555 (881)
Q Consensus 527 Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~--------------------------------------------------- 555 (881)
||+++|+|||++.||.++|+++||..++-
T Consensus 672 gi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1054)
T TIGR01657 672 SIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASR 751 (1054)
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccc
Confidence 99999999999999999999999964310
Q ss_pred -------------hcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCc
Q 043535 556 -------------RNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGT 622 (881)
Q Consensus 556 -------------~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~ 622 (881)
.++.++++.+.+.++.||||++|+||.++|+.+|+.|+.|+|+|||+||+||||+|||||||+ ++
T Consensus 752 ~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~-~~- 829 (1054)
T TIGR01657 752 YHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS-EA- 829 (1054)
T ss_pred eEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec-cc-
Confidence 012234566777888999999999999999999999999999999999999999999999998 43
Q ss_pred HHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Q 043535 623 AVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGA 702 (881)
Q Consensus 623 ~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~ 702 (881)
+ |..+||+++.+++++++++++++||+++.++++.++|.+.+++...+...+ ++..+.|++++|++|+|++++.+++
T Consensus 830 d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~ 906 (1054)
T TIGR01657 830 E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVA 906 (1054)
T ss_pred c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHH
Confidence 3 558899999999999999999999999999999999999999887555443 3334589999999999999999999
Q ss_pred HHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc--cccC------C----CcccchhHHHH
Q 043535 703 LALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGE--SVLG------V----NENVKDTMIFN 770 (881)
Q Consensus 703 l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~----~~~~~~t~~f~ 770 (881)
++++.++|++++|++|| ..+++++.++..++.++++++++.+..++... .|+. . .....+|++|
T Consensus 907 l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f- 982 (1054)
T TIGR01657 907 LLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF- 982 (1054)
T ss_pred HHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-
Confidence 99999999999999999 46899999999999999999887766655332 2321 1 0123358888
Q ss_pred HHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHH----HHHHhhhhhcCCCCCh
Q 043535 771 TFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVV----MVEILKKFADTEGLNW 830 (881)
Q Consensus 771 ~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~l~~ 830 (881)
.++.+|.+..+.+++ ...+|.+++++|+++++++++.+++++. ++++++.+|++.|++.
T Consensus 983 ~~~~~~~~~~~~~~~-~g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 983 FVSSFQYLITAIVNS-KGPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ 1045 (1054)
T ss_pred HHHHHHHHHheEEEc-CCcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH
Confidence 555666666666666 3667777999999888887776665542 2478899999999985
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-107 Score=975.58 Aligned_cols=713 Identities=22% Similarity=0.350 Sum_probs=587.7
Q ss_pred CCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 043535 47 GIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG-LNLFIAVSIYISVSASSKYMQNK 125 (881)
Q Consensus 47 GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~-~~~~~~i~~~~~i~~~~~~~~~~ 125 (881)
|||++| +++|+++||+|+++++ .++.|..|+++|++|++++++++++++++.+ +...+.+++++++++..++++++
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~~~~~~~~i~~~~~i~~~i~~~qe~ 77 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIALENWVDFVIILGLLLLNATIGFIEEN 77 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhcchhhhhhhhhhhHHHHHHHHHHHH
Confidence 899998 9999999999999985 4567888999999999999999999999886 43344444555666666777777
Q ss_pred HHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCc
Q 043535 126 KFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNP 199 (881)
Q Consensus 126 ~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~ 199 (881)
+.++.++++.+ +.+++|+|||++++|+++||||||+|.+++||+|||||++++|+++.+||| |+ .|+.+..++
T Consensus 78 ~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES-~PV~K~~~~ 156 (755)
T TIGR01647 78 KAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGES-LPVTKKTGD 156 (755)
T ss_pred HHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCc-cceEeccCC
Confidence 77666666654 458999999999999999999999999999999999999999997899998 44 666666899
Q ss_pred eeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hHH--
Q 043535 200 FLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL-----DLN-- 272 (881)
Q Consensus 200 ~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~-----~~~-- 272 (881)
.+|+||.+.+|+++++|++||.+|++|++.+.+.+.+.+++|+|+.+++++.++.+++++++++.+++++ ++.
T Consensus 157 ~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 236 (755)
T TIGR01647 157 IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREG 236 (755)
T ss_pred eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 9999999999999999999999999999999998888788999999999999998888777776666543 222
Q ss_pred -----HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCC-hHH
Q 043535 273 -----AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIA-PKV 346 (881)
Q Consensus 273 -----~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~-~~~ 346 (881)
.++..+|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|++.+...... .+.
T Consensus 237 ~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~ 316 (755)
T TIGR01647 237 LQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDK 316 (755)
T ss_pred HHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCH
Confidence 22234499999999999999999999999999999999999999999999999999999999988743211 112
Q ss_pred HHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCC
Q 043535 347 VELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKA 426 (881)
Q Consensus 347 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~ 426 (881)
.+.+..+ ++|+. ..++||+|.|+++++. +. ...+..++..+..||++.+|+|+++++..+
T Consensus 317 ~~~l~~a-~~~~~--------------~~~~~pi~~Ai~~~~~-~~----~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~ 376 (755)
T TIGR01647 317 DDVLLYA-ALASR--------------EEDQDAIDTAVLGSAK-DL----KEARDGYKVLEFVPFDPVDKRTEATVEDPE 376 (755)
T ss_pred HHHHHHH-HHhCC--------------CCCCChHHHHHHHHHH-Hh----HHHHhcCceEEEeccCCCCCeEEEEEEeCC
Confidence 2333322 22221 1246899999999765 22 223456788999999999999999998765
Q ss_pred CCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeec
Q 043535 427 DNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLL 506 (881)
Q Consensus 427 ~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i 506 (881)
+++.++++||+||.|+++|+.. ++.++.+.+..++++.+|+|++++|||+ .|++++|+|++
T Consensus 377 ~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli 437 (755)
T TIGR01647 377 TGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLL 437 (755)
T ss_pred CceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEe
Confidence 4557788999999999999742 2456778888899999999999999973 25789999999
Q ss_pred cccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-----------hhhcCCHHHHHHHHhhheeeec
Q 043535 507 GIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-----------EFRNYTEEEKMEKVEKIYVMAR 575 (881)
Q Consensus 507 ~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-----------~~~~~~~~~~~~~~~~~~v~~~ 575 (881)
+++||+||+++++|++||++||+++|+|||++.+|.++|+++||... +.+.++++++.+.+++..+|+|
T Consensus 438 ~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 438 PLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred eccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe
Confidence 99999999999999999999999999999999999999999999752 2346778889999999999999
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHH
Q 043535 576 ASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655 (881)
Q Consensus 576 ~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i 655 (881)
++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||+ +|++.+|++||+++.++++..+++++++||++|+|+
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni 596 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRM 596 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHH
Q 043535 656 QKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNL 735 (881)
Q Consensus 656 ~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 735 (881)
++++.|.++.|+..+++.+++.++.+ .|++|+|++|+|+++|. +++++++|++++. ++|..+ .+ ...+..+
T Consensus 597 ~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~~---~~-~~~~~~~ 667 (755)
T TIGR01647 597 KSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQRW---NL-REVFTMS 667 (755)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCcc---ch-HHHHHHH
Confidence 99999999999998877777766544 45999999999999997 6999999998742 333322 23 3566666
Q ss_pred HHHHHHHHHHHHHHHHhhcc---c---cC--CCcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHH
Q 043535 736 LAQAFYQIAVLLTLLFKGES---V---LG--VNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGI 807 (881)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~---~---~~--~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~ 807 (881)
+..|.+.++..+.++++... + ++ .+....+|++|..+++.|.++.+++|+. + .+|+. ..++++..+.++
T Consensus 668 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~-~-~~~~~-~p~~~l~~~~~~ 744 (755)
T TIGR01647 668 TVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRTH-G-FFWSE-RPGKLLFIAFVI 744 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheeccC-C-CCccc-CCcHHHHHHHHH
Confidence 66777766655544432221 1 11 1234678999999999999999999973 3 33432 366666666655
Q ss_pred HHHHHHHH
Q 043535 808 TIVLQVVM 815 (881)
Q Consensus 808 ~~~~~~~~ 815 (881)
..++..++
T Consensus 745 ~~~~~~~~ 752 (755)
T TIGR01647 745 AQIIATFI 752 (755)
T ss_pred HHHHHHHH
Confidence 55544443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-98 Score=930.87 Aligned_cols=765 Identities=21% Similarity=0.239 Sum_probs=591.8
Q ss_pred cCCCccCCCCCCcH---HHHHHHHhhHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 62 FGSNTYKKPPTESF---FSFVVDTFKSFTVLILFVCAILSLAFGL------NLFIAVSIYISVSASSKYMQNKKFEKLLS 132 (881)
Q Consensus 62 yG~N~i~~~~~~~~---~~~l~~~f~~~~~~~ll~~ail~~~~~~------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~ 132 (881)
|.+|.+...|++.+ ++.+++||++++|++|++++++++++.+ ..++|++++++++++.+++++.++++ .+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~-~d 79 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRR-RD 79 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHH-hH
Confidence 67899998888766 7889999999999999999999999763 67888999999999999999999999 66
Q ss_pred hhhcCCceEEEeC-CEEEEEeccccccCcEEEEcCCCeeccceeEEeccc----eeeecC------Ccccccc-------
Q 043535 133 KVSNSIQVDVVRN-KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHS----LQIQES------DHNVEVN------- 194 (881)
Q Consensus 133 ~~~~~~~v~V~Rd-g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~----l~vdes------~~~v~~~------- 194 (881)
+..|+..++|+|+ |++++++++||+|||+|.|++||+||||++++++++ +.+|++ .| +.|.
T Consensus 80 ~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~-~~k~~~~~~~~ 158 (1057)
T TIGR01652 80 KEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNL-KLRQALEETQK 158 (1057)
T ss_pred HHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecc-eEeecchhhhc
Confidence 6667889999997 899999999999999999999999999999998654 578876 12 1111
Q ss_pred ---------------------------------------CCCCceeecccEEee-CceeEEEEEEeccchhhHHHhhhcc
Q 043535 195 ---------------------------------------SSQNPFLLSGTKVVD-GYGRMLATAVGMNTTWGQIMRQTSY 234 (881)
Q Consensus 195 ---------------------------------------~~~~~~l~aGt~v~~-g~~~~~V~~tG~~T~~g~i~~~~~~ 234 (881)
.+.+|++++||.+.+ |++.|+|++||.+|.+++. ...
T Consensus 159 ~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n---~~~ 235 (1057)
T TIGR01652 159 MLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRN---ATQ 235 (1057)
T ss_pred cCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhc---CCC
Confidence 012367899999999 9999999999999977654 445
Q ss_pred CCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------hH----------------HHHH------Hhhccccc
Q 043535 235 NTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL---------DL----------------NAVV------NLIIPEGL 283 (881)
Q Consensus 235 ~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~---------~~----------------~~~l------~i~iP~~L 283 (881)
.+.+++++++.++++...++.++++++++.+++.. .+ ..++ ..++|++|
T Consensus 236 ~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL 315 (1057)
T TIGR01652 236 APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISL 315 (1057)
T ss_pred CcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceee
Confidence 67789999999999999888877777666555321 01 0111 23399999
Q ss_pred hHHHHHHHHHHH------HHHhhc----cccccCchhhhhccceEEEEecCccccccCceEEeecCC-------CC----
Q 043535 284 PLAVTVTIAYSM------KRLMID----HAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHS-------NI---- 342 (881)
Q Consensus 284 ~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~-------~~---- 342 (881)
++.++++....+ .+|.++ ++.+|+++++|+||++++||+|||||||+|+|+++++.. ..
T Consensus 316 ~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~ 395 (1057)
T TIGR01652 316 YVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395 (1057)
T ss_pred eehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHH
Confidence 999999999888 778764 599999999999999999999999999999999987620 00
Q ss_pred ---------------------------C-------------hHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHH
Q 043535 343 ---------------------------A-------------PKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEK 382 (881)
Q Consensus 343 ---------------------------~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~ 382 (881)
+ .+....+..++++||++.....+++.+...+..+||+|.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ 475 (1057)
T TIGR01652 396 DAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEA 475 (1057)
T ss_pred HHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHH
Confidence 0 011233456778888776542111111123557999999
Q ss_pred HHHhcccccCCCChhh--------------hhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhcccc
Q 043535 383 AILSWPILGMSMDMEQ--------------IRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSY 448 (881)
Q Consensus 383 al~~~~~~~~~~~~~~--------------~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~ 448 (881)
|+++++. ..|+.... ....+++++.+||+|+||||||+++++++ ++++|+|||||.|+++|+..
T Consensus 476 ALl~~a~-~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~-~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 476 ALVKAAR-DVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG-RIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHH-HCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC-eEEEEEeCcHHHHHHHhhcc
Confidence 9999887 66654321 22468899999999999999999998654 48899999999999999741
Q ss_pred ccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-------------------------ccccccCceee
Q 043535 449 YDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-------------------------EELNEENLILL 503 (881)
Q Consensus 449 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-------------------------~~~~e~~l~~l 503 (881)
++..++.+.+.+++++.+|+||+++|||++++++ .+.+|+|++|+
T Consensus 554 ----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~l 623 (1057)
T TIGR01652 554 ----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILL 623 (1057)
T ss_pred ----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEE
Confidence 2345678889999999999999999999987531 13468999999
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh----------c----------------
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR----------N---------------- 557 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----------~---------------- 557 (881)
|+++++|++|++++++|++|+++||++||+|||+++||.++|++||+...+.. +
T Consensus 624 G~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~ 703 (1057)
T TIGR01652 624 GATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTS 703 (1057)
T ss_pred EEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999764210 0
Q ss_pred ---------------CCHH------------HHHHHHhhh--eeeeccCHHHHHHHHHHHhhc-CCEEEEEcCCccCHHH
Q 043535 558 ---------------YTEE------------EKMEKVEKI--YVMARASPDDKLAMVKCLKLK-GHVVAVTGNGIKDAPA 607 (881)
Q Consensus 558 ---------------~~~~------------~~~~~~~~~--~v~~~~~p~~K~~~v~~l~~~-g~~v~~iGDg~ND~~~ 607 (881)
.+.+ ++.+...++ .||||++|+||.++|+.+|+. |++|+|+|||+||++|
T Consensus 704 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~m 783 (1057)
T TIGR01652 704 EEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSM 783 (1057)
T ss_pred HhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHH
Confidence 0001 112233333 499999999999999999998 9999999999999999
Q ss_pred HHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---C
Q 043535 608 LEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL-NWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGK---N 683 (881)
Q Consensus 608 l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~---~ 683 (881)
|++|||||++.+.+..+|+.+||+++.+ |..+.+++ .|||++|.|+++.+.|.+++|+..+++.+++.+++++ +
T Consensus 784 lk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~ 861 (1057)
T TIGR01652 784 IQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQT 861 (1057)
T ss_pred HhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH
Confidence 9999999998656656899999999985 89999887 8899999999999999999999999999999988765 4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcc--cCCCccccccCCC----CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccc-
Q 043535 684 PLTAVQLLWMNLIVLTLGALALVT--EQPTKELMEKPPV----RLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESV- 756 (881)
Q Consensus 684 pl~~~q~l~~~~~~~~~~~l~l~~--~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 756 (881)
++.+++++|+|++++.+|+++++. +++++++|.++|+ .+..+.++.+.+..|+..|++++++++++.+.....
T Consensus 862 ~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~ 941 (1057)
T TIGR01652 862 LYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILG 941 (1057)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 577889999999999999999974 3556788888887 456788999888889999999998876554322211
Q ss_pred --c--CC--CcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHHHHHhhhh--------
Q 043535 757 --L--GV--NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKF-------- 822 (881)
Q Consensus 757 --~--~~--~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-------- 822 (881)
. |. +.....++.|.++++...+..+..-+ .++++.+.++.+++++.+++......+
T Consensus 942 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~ 1011 (1057)
T TIGR01652 942 DFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEIN----------RWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYK 1011 (1057)
T ss_pred ccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHh----------HhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHH
Confidence 0 11 12233455666665555544433211 112222233333333332222111111
Q ss_pred -hcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 823 -ADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 823 -f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
+....-++.+|+.+++..++++++..+++.+++
T Consensus 1012 ~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~ 1045 (1057)
T TIGR01652 1012 AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQR 1045 (1057)
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111123577899888888889999999998875
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-93 Score=877.69 Aligned_cols=768 Identities=18% Similarity=0.202 Sum_probs=581.1
Q ss_pred cccCCCccCCCCCC---cHHHHHHHHhhHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 60 GLFGSNTYKKPPTE---SFFSFVVDTFKSFTVLILFVCAILSLAFGL------NLFIAVSIYISVSASSKYMQNKKFEKL 130 (881)
Q Consensus 60 ~~yG~N~i~~~~~~---~~~~~l~~~f~~~~~~~ll~~ail~~~~~~------~~~~~i~~~~~i~~~~~~~~~~~~~~~ 130 (881)
.+|..|.+...|++ .+++.+++||+++.|+||++++++++++.+ +.++|+++++++++++++.++.++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k- 163 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHR- 163 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 35888999988776 445678999999999999999999998864 67899999999999999999999999
Q ss_pred HHhhhcCCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccc----eeeecC----Ccccccc--------
Q 043535 131 LSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHS----LQIQES----DHNVEVN-------- 194 (881)
Q Consensus 131 l~~~~~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~----l~vdes----~~~v~~~-------- 194 (881)
.|+..|+..++|+|+|++++++|++|+|||+|.|++||+||||++++++++ ..+|++ |+ .+|.
T Consensus 164 ~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt-~~k~k~~~~~~~ 242 (1178)
T PLN03190 164 SDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGES-NLKTRYAKQETL 242 (1178)
T ss_pred hHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCee-eeeEecccchhh
Confidence 777778889999999999999999999999999999999999999998433 367766 11 0100
Q ss_pred -------------------------------------CCCCceeecccEEeeC-ceeEEEEEEeccchhhHHHhhhccCC
Q 043535 195 -------------------------------------SSQNPFLLSGTKVVDG-YGRMLATAVGMNTTWGQIMRQTSYNT 236 (881)
Q Consensus 195 -------------------------------------~~~~~~l~aGt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~~~~ 236 (881)
...+|++++||.+.+. .++|+|++||.+|. ++.+...++
T Consensus 243 ~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK---~~~N~~~~~ 319 (1178)
T PLN03190 243 SKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK---AMLNNSGAP 319 (1178)
T ss_pred hcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhh---HhhcCCCCC
Confidence 0134678888888876 69999999999996 454555667
Q ss_pred CccChHHHHHHHHHHHHHHHHHHHHHHHHHHH---hh----------------------------------HHHH-----
Q 043535 237 SEWTLLKARVRKLTSLVDLIGLAITFSGLLMI---LD----------------------------------LNAV----- 274 (881)
Q Consensus 237 ~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~---~~----------------------------------~~~~----- 274 (881)
.|.+++++.++++...++.+.+++|+++.+.. .. +..+
T Consensus 320 ~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~li 399 (1178)
T PLN03190 320 SKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVI 399 (1178)
T ss_pred CCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHH
Confidence 89999999999999988888777766654331 00 0111
Q ss_pred -HHhhccccchHHHHHHHHHHHHHHhhcc----------ccccCchhhhhccceEEEEecCccccccCceEEeecC----
Q 043535 275 -VNLIIPEGLPLAVTVTIAYSMKRLMIDH----------AMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADH---- 339 (881)
Q Consensus 275 -l~i~iP~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~---- 339 (881)
+..+||.+|++.+.+.....+..+.++. +.||+++.+|+||+|++||+|||||||+|+|+++++.
T Consensus 400 l~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~ 479 (1178)
T PLN03190 400 VFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGV 479 (1178)
T ss_pred HHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCE
Confidence 1234999999999999976566666544 7799999999999999999999999999999988751
Q ss_pred ---CCC---------------------------C-------------h--HHHHHHHHHhhhccccceeeccCC-C---C
Q 043535 340 ---SNI---------------------------A-------------P--KVVELIQQGFALNTTAGFYKRTSG-S---G 370 (881)
Q Consensus 340 ---~~~---------------------------~-------------~--~~~~~l~~~~~~~~~~~~~~~~~~-~---~ 370 (881)
... + + ...+.+..++++||++.....+.. + +
T Consensus 480 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~ 559 (1178)
T PLN03190 480 DYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVK 559 (1178)
T ss_pred EcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcccc
Confidence 000 0 0 012335567888998765321111 1 1
Q ss_pred cceeecCChHHHHHHhcccccCCC------------ChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCH
Q 043535 371 LEIELSGSSIEKAILSWPILGMSM------------DMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAA 438 (881)
Q Consensus 371 ~~~~~~~~p~e~al~~~~~~~~~~------------~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~ 438 (881)
...+.++||+|.||++++. ..|+ +....+..|++++++||+|+||||||+++.+++ ++++|+||||
T Consensus 560 ~~~Y~a~SPdE~ALv~~a~-~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~-~~~l~~KGA~ 637 (1178)
T PLN03190 560 LMDYQGESPDEQALVYAAA-AYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDK-TVKVFVKGAD 637 (1178)
T ss_pred ceEEecCCCcHHHHHHHHH-HCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCC-cEEEEEecCc
Confidence 2346677999999999998 7886 444556789999999999999999999997654 4899999999
Q ss_pred HHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-------------------------c
Q 043535 439 EIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-------------------------E 493 (881)
Q Consensus 439 e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-------------------------~ 493 (881)
|.|+++|++.. ++..++.+.+.+++++++|+||+++|||++++++ .
T Consensus 638 e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~ 708 (1178)
T PLN03190 638 TSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVA 708 (1178)
T ss_pred HHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhH
Confidence 99999997532 2335677889999999999999999999996421 1
Q ss_pred cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh-----------------
Q 043535 494 ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR----------------- 556 (881)
Q Consensus 494 ~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----------------- 556 (881)
+.+|+||+++|+++++|++|++++++|++|+++||++||+|||+.+||.+||++||+.+++.+
T Consensus 709 ~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~ 788 (1178)
T PLN03190 709 SNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLE 788 (1178)
T ss_pred HhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHH
Confidence 346899999999999999999999999999999999999999999999999999999754110
Q ss_pred c----------------------------------------CCH----HHHHHHHhhhe--eeeccCHHHHHHHHHHHhh
Q 043535 557 N----------------------------------------YTE----EEKMEKVEKIY--VMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 557 ~----------------------------------------~~~----~~~~~~~~~~~--v~~~~~p~~K~~~v~~l~~ 590 (881)
+ +.+ +++.+...++. ||||++|+||+++|+.+|+
T Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~ 868 (1178)
T PLN03190 789 DALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKN 868 (1178)
T ss_pred HHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHh
Confidence 0 000 12223333333 7999999999999999999
Q ss_pred c-CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 043535 591 K-GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSS 669 (881)
Q Consensus 591 ~-g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~ 669 (881)
. +++|+|+|||+||++||++|||||++.+.++.+|+.+|||++.+.++...+ ++.|||++|.|+.+.+.|.|++|++.
T Consensus 869 ~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rL-LlvHGr~~y~R~s~~i~y~fYKN~~~ 947 (1178)
T PLN03190 869 RTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPL-LLVHGHWNYQRMGYMILYNFYRNAVF 947 (1178)
T ss_pred cCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8 579999999999999999999999987777779999999999986654444 67799999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChh---HHHHHHHHHHHHHHHHHHhc-cc--CCCccccccCCCC---CCCCCccHHHHHHHHHHHH
Q 043535 670 VLFNFLAAVLVGKNPLT---AVQLLWMNLIVLTLGALALV-TE--QPTKELMEKPPVR---LTEPLITNVMWRNLLAQAF 740 (881)
Q Consensus 670 i~~~~~~~~~~~~~pl~---~~q~l~~~~~~~~~~~l~l~-~~--~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~ 740 (881)
+++++++.+++++++.+ .+-+.++|++++.+|.++++ +| .|++.+++.|-.+ +....++.+.+..|++.|+
T Consensus 948 ~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i 1027 (1178)
T PLN03190 948 VLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTL 1027 (1178)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHH
Confidence 99999999999988865 55588899999999999985 44 3455666666544 3456788888889999999
Q ss_pred HHHHHHHHHHHhhccccCCCcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHHH----
Q 043535 741 YQIAVLLTLLFKGESVLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMV---- 816 (881)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---- 816 (881)
+|++++|++.+........+.....++++.+.++...+.+....+ .++++.++++.+++++.+++.
T Consensus 1028 ~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~~----------~wt~~~~~~i~~Si~~~~i~~~~~~ 1097 (1178)
T PLN03190 1028 WQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDII----------RWNWITHAAIWGSIVATFICVIVID 1097 (1178)
T ss_pred HHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999887755432211111111222334444444333333222111 112211222222322222111
Q ss_pred --HH---hhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 817 --EI---LKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 817 --~~---~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
+. ...++. ..-++.+|+.++++.++++++..++|.+++
T Consensus 1098 ~~~~~~~~~~~~~-~~~~~~fwl~ill~~~~~l~p~~~~~~~~~ 1140 (1178)
T PLN03190 1098 AIPTLPGYWAIFH-IAKTGSFWLCLLAIVVAALLPRFVVKVLYQ 1140 (1178)
T ss_pred hcccchhHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 011111 112577899888888889999999998875
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-94 Score=807.41 Aligned_cols=772 Identities=20% Similarity=0.270 Sum_probs=593.7
Q ss_pred CCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 043535 45 HGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-NLFIAVSIYISVSASSKYMQ 123 (881)
Q Consensus 45 ~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~-~~~~~i~~~~~i~~~~~~~~ 123 (881)
..||+..+ +.+|+..||+|.+..+ .++++.++.++..+|++.++.+..++|.+..+ .+...++++...+.....++
T Consensus 158 ~~gL~~~~--~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e 234 (1140)
T KOG0208|consen 158 SNGLERQE--IIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYE 234 (1140)
T ss_pred cCCccHHH--HHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 46998877 9999999999999987 67899999999999999999999999988875 44555555556666555555
Q ss_pred HHHHHHHHHhhh-cCCceEEEeCCEEEEEeccccccCcEEEEcC-CCeeccceeEEeccceeeecC---CccccccC---
Q 043535 124 NKKFEKLLSKVS-NSIQVDVVRNKRRQQILLSNVVVGDVICLKI-GDQVPADGIFLDGHSLQIQES---DHNVEVNS--- 195 (881)
Q Consensus 124 ~~~~~~~l~~~~-~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~-G~~vPaD~~ll~g~~l~vdes---~~~v~~~~--- 195 (881)
.|+...-+.++. ...+|+|+|||.+++|+++|||||||+++.+ |-..|||+++++|++ .|||| ++++|+.+
T Consensus 235 ~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTGESVPv~K~~l 313 (1140)
T KOG0208|consen 235 TRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTGESVPVTKTPL 313 (1140)
T ss_pred HHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccCCcccccccCC
Confidence 444443355554 3459999999999999999999999999999 999999999999998 89998 22244432
Q ss_pred ----------------CCCceeecccEEee------CceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHH
Q 043535 196 ----------------SQNPFLLSGTKVVD------GYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLV 253 (881)
Q Consensus 196 ----------------~~~~~l~aGt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~ 253 (881)
...+.+|+||.+++ +.+.+.|+|||.+|..|++.|++.+++.....+-+...+|...+
T Consensus 314 ~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l 393 (1140)
T KOG0208|consen 314 PMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFL 393 (1140)
T ss_pred ccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHH
Confidence 24578999999986 56899999999999999999999999888888888887777777
Q ss_pred HHHHHHHHHHHHHHHh----h-------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEe
Q 043535 254 DLIGLAITFSGLLMIL----D-------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICT 322 (881)
Q Consensus 254 ~~i~l~~~~~~~~~~~----~-------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~ 322 (881)
..++++..+...+... + ..+++++.+|+|||.+++++..++..||.|+||+|.+++.+...|++|++||
T Consensus 394 ~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cF 473 (1140)
T KOG0208|consen 394 VIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCF 473 (1140)
T ss_pred HHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEE
Confidence 6666554443333322 2 2234466799999999999999999999999999999999999999999999
Q ss_pred cCccccccCceEEeecCCC-----CCh----------------------HHHHHHHHHhhhccccceeeccCCCCcceee
Q 043535 323 DKTGTLTLNQMKGAADHSN-----IAP----------------------KVVELIQQGFALNTTAGFYKRTSGSGLEIEL 375 (881)
Q Consensus 323 DKTGTLT~~~m~v~~~~~~-----~~~----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (881)
|||||||++.+.+..+... ..+ .....+..+++.||+.... ....
T Consensus 474 DKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v--------~g~l 545 (1140)
T KOG0208|consen 474 DKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLV--------DGTL 545 (1140)
T ss_pred cCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEe--------CCee
Confidence 9999999999987664210 000 0112344455556533222 2356
Q ss_pred cCChHHHHHHhcccccCCC---Chh---------------------hhh----hcceEEEEecCCCCCceEEEEEeeCCC
Q 043535 376 SGSSIEKAILSWPILGMSM---DME---------------------QIR----QSCVILQVEAFNSHRKQSRVMMRKKAD 427 (881)
Q Consensus 376 ~~~p~e~al~~~~~~~~~~---~~~---------------------~~~----~~~~~~~~~~F~s~~k~~sviv~~~~~ 427 (881)
.|||+|..+++...|.+.. +.+ ... +.+.+++.+||+|..+|||||+..+++
T Consensus 546 ~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e 625 (1140)
T KOG0208|consen 546 VGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGE 625 (1140)
T ss_pred ccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCC
Confidence 8889888888766554311 000 000 147789999999999999999999988
Q ss_pred CeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCC--------cccccccC
Q 043535 428 NTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVP--------EEELNEEN 499 (881)
Q Consensus 428 ~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~--------~~~~~e~~ 499 (881)
++..+|+|||||.|.+.|++ +..++++.+.++.|+.+|+|++|+|+|+++.. .++..|+|
T Consensus 626 ~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~ 693 (1140)
T KOG0208|consen 626 DKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESN 693 (1140)
T ss_pred CceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcc
Confidence 88999999999999999985 34467899999999999999999999999864 47889999
Q ss_pred ceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------------------------
Q 043535 500 LILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------------------------- 553 (881)
Q Consensus 500 l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------------- 553 (881)
++|+|++.||+++|++++.+|++|++++||++|+||||..||..+||+||+..+
T Consensus 694 l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve 773 (1140)
T KOG0208|consen 694 LEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVE 773 (1140)
T ss_pred ceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEcc
Confidence 999999999999999999999999999999999999999999999999999876
Q ss_pred ---h-------------------------------------hhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCC
Q 043535 554 ---E-------------------------------------FRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGH 593 (881)
Q Consensus 554 ---~-------------------------------------~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~ 593 (881)
. +.+..++.+..++.+..|||||+|+||.++|+.+|+.|+
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y 853 (1140)
T KOG0208|consen 774 SQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGY 853 (1140)
T ss_pred CccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCc
Confidence 0 001122445666777889999999999999999999999
Q ss_pred EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 594 VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFN 673 (881)
Q Consensus 594 ~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~ 673 (881)
.|+|||||+|||.|||+||+||+.+ ..+|.-+|.|...-.+..++.+.|++||+.+...-..++|...+.+...+..
T Consensus 854 ~VgfCGDGANDCgALKaAdvGISLS---eaEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv 930 (1140)
T KOG0208|consen 854 KVGFCGDGANDCGALKAADVGISLS---EAEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISV 930 (1140)
T ss_pred EEEecCCCcchhhhhhhcccCcchh---hhhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999997 3457778999998889999999999999999999999999887766543322
Q ss_pred HHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043535 674 FLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKG 753 (881)
Q Consensus 674 ~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (881)
+ .++.....+++.|.++++++..++-++++++.+|...+-..|| +..+++...+...++|.++..++.+..++..
T Consensus 931 ~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~ 1005 (1140)
T KOG0208|consen 931 V--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQWILTLIV 1005 (1140)
T ss_pred h--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHHHhhheee
Confidence 2 2344567899999999999999999999999999988877776 5678888888888888887777766665433
Q ss_pred c--cccCC--------CcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHH--HHH---
Q 043535 754 E--SVLGV--------NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEI--- 818 (881)
Q Consensus 754 ~--~~~~~--------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~--- 818 (881)
. .|+-. ......|..|..-.+..+++.+... ...++.+++|+|+.|...+....+..+.+ +..
T Consensus 1006 ~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S--~g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~ 1083 (1140)
T KOG0208|consen 1006 EPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLS--KGSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFI 1083 (1140)
T ss_pred ccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeec--cCCcccCchhcCceeeeehhhHHhhhhhhhhccccch
Confidence 2 33331 1223346666655555555554432 25567779999987765443333222222 111
Q ss_pred hhhhhcCCCCChhh-HHHHHHHHHHHHHHHHHH
Q 043535 819 LKKFADTEGLNWIQ-WGSCIGIAAISWPIGWFV 850 (881)
Q Consensus 819 ~~~~f~~~~l~~~~-~~~~~~~~~~~~~~~~l~ 850 (881)
...+++.++.+-.. -++++.+....+....+.
T Consensus 1084 ~~~l~~~t~~~~~~~~fii~~~~~~~~~~~~~~ 1116 (1140)
T KOG0208|consen 1084 EWKLLQLTYIPTTFDRFIILLVVISYFALNYIQ 1116 (1140)
T ss_pred hhhhhceeccCcchhHHHHHHHHHHHHHHHHhh
Confidence 12456677766533 333333333344333333
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-87 Score=724.54 Aligned_cols=768 Identities=22% Similarity=0.254 Sum_probs=607.3
Q ss_pred HHhcccCCCccCCCCCC---cHHHHHHHHhhHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 57 RRQGLFGSNTYKKPPTE---SFFSFVVDTFKSFTVLILFVCAILSLAFGL------NLFIAVSIYISVSASSKYMQNKKF 127 (881)
Q Consensus 57 ~r~~~yG~N~i~~~~~~---~~~~~l~~~f~~~~~~~ll~~ail~~~~~~------~~~~~i~~~~~i~~~~~~~~~~~~ 127 (881)
.++++|-+|.+.+.|++ .++..+++||+-+.|+++++.++.++++.+ +++.|+.++.+++.+++..++.++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45778889999988776 556789999999999999999999998864 788889999999999999998888
Q ss_pred HHHHHhhhcCCceEEE-eCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccce----e--eec----C---------
Q 043535 128 EKLLSKVSNSIQVDVV-RNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSL----Q--IQE----S--------- 187 (881)
Q Consensus 128 ~~~l~~~~~~~~v~V~-Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l----~--vde----s--------- 187 (881)
.+ .|+..|+...+++ |||-..+ |++++++||+|.++.+++||||++++..++- . .|+ .
T Consensus 154 ~~-rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp 231 (1051)
T KOG0210|consen 154 RR-RDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVP 231 (1051)
T ss_pred HH-hhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccch
Confidence 88 8888888777776 5665554 9999999999999999999999999976520 0 111 0
Q ss_pred -------------------Cccc----------------cccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhh
Q 043535 188 -------------------DHNV----------------EVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQT 232 (881)
Q Consensus 188 -------------------~~~v----------------~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 232 (881)
.|+. +....-.|.++++|.+.+|.+.++|++||.+|+. ..+.
T Consensus 232 ~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs---vMNt 308 (1051)
T KOG0210|consen 232 RTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS---VMNT 308 (1051)
T ss_pred hhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH---Hhcc
Confidence 1100 0001135789999999999999999999999954 3445
Q ss_pred ccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hHHHHHHhhccccchHHHHHHHHHHHHHHhhc-
Q 043535 233 SYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----------DLNAVVNLIIPEGLPLAVTVTIAYSMKRLMID- 301 (881)
Q Consensus 233 ~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----------~~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~- 301 (881)
..++.|...++..+|.+.+.+....++++++...+-. .+.-+++.+||.+|.+-+.++...-.....++
T Consensus 309 s~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~ 388 (1051)
T KOG0210|consen 309 SRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDK 388 (1051)
T ss_pred CCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCC
Confidence 5788888999999999999998888887776655432 23344466699999999999988777666654
Q ss_pred ---cccccCchhhhhccceEEEEecCccccccCceEEeecC-----------------------C-------------CC
Q 043535 302 ---HAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADH-----------------------S-------------NI 342 (881)
Q Consensus 302 ---~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~-----------------------~-------------~~ 342 (881)
|..+|++...|+||++.++.+|||||||+|+|++++.+ + ..
T Consensus 389 ~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~ 468 (1051)
T KOG0210|consen 389 NIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKD 468 (1051)
T ss_pred CCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCc
Confidence 67899999999999999999999999999999998851 0 01
Q ss_pred ChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChh-------------hhhhcceEEEEe
Q 043535 343 APKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDME-------------QIRQSCVILQVE 409 (881)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 409 (881)
.......+..++++||++.....++ +...|+..+|+|.|++++.. ..|...- ....+|+++..+
T Consensus 469 ~s~rv~~~V~alalCHNVTPv~e~~--ge~sYQAaSPDEVAiVkwTe-~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vF 545 (1051)
T KOG0210|consen 469 MSARVRNAVLALALCHNVTPVFEDD--GEVSYQAASPDEVAIVKWTE-TVGLKLAKRDRHAITLRVPLDDELNYQILQVF 545 (1051)
T ss_pred ccHHHHHHHHHHHHhccCCcccCCC--ceEEeecCCCCeEEEEEeee-ecceEEeecccceEEEecCCCcceeEEEEEEe
Confidence 1122334556788999887654222 23668899999999999987 7776432 122479999999
Q ss_pred cCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCC
Q 043535 410 AFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVP 489 (881)
Q Consensus 410 ~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~ 489 (881)
||+|+.|||++||+++..+++..|.|||+..|..... ..+++++...+++.+|+|++.+|.|.++
T Consensus 546 PFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq---------------~NdWleEE~gNMAREGLRtLVvakK~Ls 610 (1051)
T KOG0210|consen 546 PFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ---------------YNDWLEEECGNMAREGLRTLVVAKKVLS 610 (1051)
T ss_pred ccccccceeeEEEecCCCceEEEEEecchHHHhcccc---------------cchhhhhhhhhhhhhcceEEEEEecccC
Confidence 9999999999999999888899999999998865443 2468899999999999999999999998
Q ss_pred CCc--------------------------ccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHH
Q 043535 490 VPE--------------------------EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKA 543 (881)
Q Consensus 490 ~~~--------------------------~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ 543 (881)
+.+ +..+|.|++++|++++||+++++++.+++.||+||||+||+|||+.+||..
T Consensus 611 ~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~c 690 (1051)
T KOG0210|consen 611 EEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAIC 690 (1051)
T ss_pred HHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheee
Confidence 632 125689999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCch------------------hhh---------------------cCCHHHHHHHHhhh--eeeeccCHHHHH
Q 043535 544 IATQCGILKP------------------EFR---------------------NYTEEEKMEKVEKI--YVMARASPDDKL 582 (881)
Q Consensus 544 ia~~~gi~~~------------------~~~---------------------~~~~~~~~~~~~~~--~v~~~~~p~~K~ 582 (881)
+|+..++... +++ +.-++|+.+...++ .++||++|+||+
T Consensus 691 iAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA 770 (1051)
T KOG0210|consen 691 IAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKA 770 (1051)
T ss_pred eehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHH
Confidence 9999999764 111 01134555554443 489999999999
Q ss_pred HHHHHHhhc-CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHH-HHHHhHHHHHHHHHHHH
Q 043535 583 AMVKCLKLK-GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVT-LLNWGRCVYVNIQKFIQ 660 (881)
Q Consensus 583 ~~v~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~-~i~~gR~~~~~i~~~i~ 660 (881)
++++.+|++ |.+|++||||.||+.|+++||+||++.++++.+|.-+||+.+.+ |+.+.+ ++.|||.+|.|..+.-+
T Consensus 771 ~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laq 848 (1051)
T KOG0210|consen 771 QVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQ 848 (1051)
T ss_pred HHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHH
Confidence 999999987 89999999999999999999999999889999999999999997 555555 56789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCChhHHH---HHHHHHHHHHHHHHHhcccCC--CccccccCCCC---CCCCCccHHHH
Q 043535 661 FHLTISVSSVLFNFLAAVLVGKNPLTAVQ---LLWMNLIVLTLGALALVTEQP--TKELMEKPPVR---LTEPLITNVMW 732 (881)
Q Consensus 661 ~~~~~n~~~i~~~~~~~~~~~~~pl~~~q---~l~~~~~~~~~~~l~l~~~~~--~~~~~~~~p~~---~~~~~~~~~~~ 732 (881)
|.+...++...++.+++..+.+.|...+| +..+..+++++|.+++..+.. ++..+..|..+ .+++.++-+.+
T Consensus 849 fViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF 928 (1051)
T KOG0210|consen 849 FVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTF 928 (1051)
T ss_pred HHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhh
Confidence 99999999999999998888888888888 555788899999999988764 33334444322 24567788888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHH
Q 043535 733 RNLLAQAFYQIAVLLTLLFKGESVLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQ 812 (881)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 812 (881)
..|+..++||+.++.+..+. .+..+.....++.|.++++..+......-+ .+++.+..+-+.++.+.
T Consensus 929 ~iwvLISiYQG~vim~g~~~---l~~~ef~~ivaisFtaLi~tELiMVaLtv~----------tw~~~m~vae~lsL~~Y 995 (1051)
T KOG0210|consen 929 FIWVLISIYQGSVIMYGALL---LFDTEFIHIVAISFTALILTELIMVALTVR----------TWHWLMVVAELLSLALY 995 (1051)
T ss_pred hhhhhHHHHcccHHHHHHHH---HhhhhheEeeeeeeHHHHHHHHHHHhhhhh----------hhhHHHHHHHHHHHHHH
Confidence 89999999999876543221 233334455788888888888766543322 24555556666777777
Q ss_pred HHHHHHhhhhhcCCCC-ChhhHHHHHHHHHHHHHHHHHHHhcccCCccccc
Q 043535 813 VVMVEILKKFADTEGL-NWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLSY 862 (881)
Q Consensus 813 ~~~~~~~~~~f~~~~l-~~~~~~~~~~~~~~~~~~~~l~k~~~~~~~~~~~ 862 (881)
++.++++.++|+...+ +|.+.+...++.++..++.++.|.++|+.+|=.|
T Consensus 996 ivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSY 1046 (1051)
T KOG0210|consen 996 IVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSY 1046 (1051)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcch
Confidence 7777888888776543 4556666777888888999999999985555444
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-81 Score=727.52 Aligned_cols=524 Identities=22% Similarity=0.318 Sum_probs=420.4
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---ce
Q 043535 80 VDTFKSFTVLILFVCAILSLAFGLN----------------LFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSI---QV 140 (881)
Q Consensus 80 ~~~f~~~~~~~ll~~ail~~~~~~~----------------~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~---~v 140 (881)
..+|++|+.++++++++++++.+.. +++.+++..+++.+.|.+++++.++.++++++.. ++
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 4678999999999999999876531 1233334444555555555666666677665432 46
Q ss_pred E-EEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCC---ceeecccEEeeCce
Q 043535 141 D-VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQN---PFLLSGTKVVDGYG 212 (881)
Q Consensus 141 ~-V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~---~~l~aGt~v~~g~~ 212 (881)
+ |.|||++++|++++|+|||+|.+++||+|||||++++|+. .+||| |+ .|+.++.+ +.+|+||.+.+|++
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES-~PV~K~~g~d~~~V~aGT~v~~G~~ 184 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGES-APVIKESGGDFDNVIGGTSVASDWL 184 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCC-CceeccCCCccCeeecCceeecceE
Confidence 5 7799999999999999999999999999999999999987 99998 44 55555565 67999999999999
Q ss_pred eEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhHH-------HHHHhhccccc
Q 043535 213 RMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMI--LDLN-------AVVNLIIPEGL 283 (881)
Q Consensus 213 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~--~~~~-------~~l~i~iP~~L 283 (881)
.++|+++|.+|++||+.++++..+.+++|+|.....+...+..+.+++.+..+.+. .++. .+...+|||+|
T Consensus 185 ~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~~~~~~~~~~~~~~~~~~~~~~val~V~~IP~aL 264 (673)
T PRK14010 185 EVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTI 264 (673)
T ss_pred EEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhhhhhH
Confidence 99999999999999999999988889999998777665554443333222221111 0111 11123389999
Q ss_pred hHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhcccccee
Q 043535 284 PLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFY 363 (881)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 363 (881)
+..+++....++++|+++|+++|+++++|++|++|++|||||||||+|++.+.+..+....+..+.+.. ...|+.
T Consensus 265 ~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~-a~~~~~---- 339 (673)
T PRK14010 265 GGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKA-AYESSI---- 339 (673)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHH-HHHhcC----
Confidence 999999999999999999999999999999999999999999999998877665432222222233332 223321
Q ss_pred eccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHH
Q 043535 364 KRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILA 443 (881)
Q Consensus 364 ~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~ 443 (881)
. +.||.++|+++++. +.+.+.... ..+..||++++|+|++.++ +. .+.||+++.+++
T Consensus 340 --~---------s~~P~~~AIv~~a~-~~~~~~~~~-----~~~~~pF~~~~k~~gv~~~---g~---~i~kGa~~~il~ 396 (673)
T PRK14010 340 --A---------DDTPEGRSIVKLAY-KQHIDLPQE-----VGEYIPFTAETRMSGVKFT---TR---EVYKGAPNSMVK 396 (673)
T ss_pred --C---------CCChHHHHHHHHHH-HcCCCchhh-----hcceeccccccceeEEEEC---CE---EEEECCHHHHHH
Confidence 1 23799999999886 544443211 1235799999999998753 22 345999999999
Q ss_pred hccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHH
Q 043535 444 MCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDC 523 (881)
Q Consensus 444 ~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l 523 (881)
+|+. +|... +..+.+..++++++|+|+++++ .|++++|+++++|++|||++++|++|
T Consensus 397 ~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~v~-------------~~~~~lG~i~l~Dp~R~~a~e~I~~L 453 (673)
T PRK14010 397 RVKE----AGGHI------PVDLDALVKGVSKKGGTPLVVL-------------EDNEILGVIYLKDVIKDGLVERFREL 453 (673)
T ss_pred Hhhh----cCCCC------chHHHHHHHHHHhCCCeEEEEE-------------ECCEEEEEEEeecCCcHHHHHHHHHH
Confidence 9974 12111 1235566778899999999876 37799999999999999999999999
Q ss_pred HhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCcc
Q 043535 524 QYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIK 603 (881)
Q Consensus 524 ~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~N 603 (881)
|++||+++|+|||++.||.++|+++|++. +|+|++|+||.++|+.+|++|+.|+|+|||.|
T Consensus 454 r~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvN 514 (673)
T PRK14010 454 REMGIETVMCTGDNELTAATIAKEAGVDR-------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTN 514 (673)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChh
Confidence 99999999999999999999999999987 99999999999999999999999999999999
Q ss_pred CHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 604 DAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 604 D~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
|+|||++|||||||| +|++.||++||+|++++|+..+++++++||++|.|+++++.|.++.|+...+..+..
T Consensus 515 DAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a 586 (673)
T PRK14010 515 DAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPA 586 (673)
T ss_pred hHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999999999999999776554443
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-82 Score=684.45 Aligned_cols=630 Identities=23% Similarity=0.356 Sum_probs=514.2
Q ss_pred HhhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-----
Q 043535 28 QQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG----- 102 (881)
Q Consensus 28 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~----- 102 (881)
.+-+.+|++.+.|.+... |||++| +++|+++||+|++.+++.+.+.+ |+.-|.+|..+..-.+|++...+.
T Consensus 18 l~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lK-Fl~Fm~~PlswVMEaAAimA~~Lang~~~ 93 (942)
T KOG0205|consen 18 LEAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLK-FLGFMWNPLSWVMEAAAIMAIGLANGGGR 93 (942)
T ss_pred cccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHH-HHHHHhchHHHHHHHHHHHHHHHhcCCCC
Confidence 466789999999988755 999999 99999999999999876655554 466688888888888888876553
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEE
Q 043535 103 ---LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNS--IQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFL 177 (881)
Q Consensus 103 ---~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~--~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll 177 (881)
|.-|..+...+++++...|.+|.++-.+.+.+... .+..|+|||+|.++++++||||||+.++.||+||||++++
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 34555555555667766777887777666665443 4899999999999999999999999999999999999999
Q ss_pred eccceeeecC----CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHH
Q 043535 178 DGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLV 253 (881)
Q Consensus 178 ~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~ 253 (881)
+|+-+++|+| |+ .++++++++.+|+||.|.+|++.++|++||.+|..|+-+..+.. ......+++-++.+..++
T Consensus 174 ~gD~LkiDQSAlTGES-LpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~c 251 (942)
T KOG0205|consen 174 EGDPLKIDQSALTGES-LPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFC 251 (942)
T ss_pred cCCccccchhhhcCCc-cccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHH
Confidence 9999999998 44 88888899999999999999999999999999999999998866 677788999988887766
Q ss_pred HHHHHHHHHHHHHHHh----h-HH----HHH-H-hh-ccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEE
Q 043535 254 DLIGLAITFSGLLMIL----D-LN----AVV-N-LI-IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVIC 321 (881)
Q Consensus 254 ~~i~l~~~~~~~~~~~----~-~~----~~l-~-i~-iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~ 321 (881)
.....+..++.+.+.+ . +. .++ + +- +|.++|..+++.++.++.||+++|.++|+..++|+++.+|++|
T Consensus 252 i~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLC 331 (942)
T KOG0205|consen 252 ICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 331 (942)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEe
Confidence 5443332222222222 1 11 111 2 22 9999999999999999999999999999999999999999999
Q ss_pred ecCccccccCceEEeec-----CCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCCh
Q 043535 322 TDKTGTLTLNQMKGAAD-----HSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDM 396 (881)
Q Consensus 322 ~DKTGTLT~~~m~v~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~ 396 (881)
+|||||||.|++.+.+- ..+.+++.. + ...+..+ .. ...|.+|.|++.... |+
T Consensus 332 SDKTGTLTlNkLSvdknl~ev~v~gv~~D~~--~-L~A~rAs--r~------------en~DAID~A~v~~L~-----dP 389 (942)
T KOG0205|consen 332 SDKTGTLTLNKLSVDKNLIEVFVKGVDKDDV--L-LTAARAS--RK------------ENQDAIDAAIVGMLA-----DP 389 (942)
T ss_pred ecCcCceeecceecCcCcceeeecCCChHHH--H-HHHHHHh--hh------------cChhhHHHHHHHhhc-----CH
Confidence 99999999999998772 223333322 1 1122221 11 123689999998654 45
Q ss_pred hhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhc
Q 043535 397 EQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAG 476 (881)
Q Consensus 397 ~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 476 (881)
.+.+..++.++..||++..||-+..+.+++|+ .+-.+|||||.|++.|.. +.+.++...+.+++++++
T Consensus 390 Keara~ikevhF~PFnPV~Krta~ty~d~dG~-~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~AeR 457 (942)
T KOG0205|consen 390 KEARAGIKEVHFLPFNPVDKRTALTYIDPDGN-WHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKFAER 457 (942)
T ss_pred HHHhhCceEEeeccCCccccceEEEEECCCCC-EEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHHHHh
Confidence 77888999999999999999999999998877 666699999999999974 245678888999999999
Q ss_pred chhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch---
Q 043535 477 SLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--- 553 (881)
Q Consensus 477 g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--- 553 (881)
|+|-+++|++..++...+.......|+|+.-+-||||.+..++|++....|.+|.|+|||...-++..++++|+-..
T Consensus 458 GlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp 537 (942)
T KOG0205|consen 458 GLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 537 (942)
T ss_pred cchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC
Confidence 99999999999998888777888999999999999999999999999999999999999999999999999998654
Q ss_pred --hh------hcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHH
Q 043535 554 --EF------RNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVA 625 (881)
Q Consensus 554 --~~------~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a 625 (881)
++ +.+......+.+++..-|+.+.|++|.++|+.||++++.++|+|||.||+|+||.||+|||+. .+++.+
T Consensus 538 ss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaa 616 (942)
T KOG0205|consen 538 SSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAA 616 (942)
T ss_pred chhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhh
Confidence 11 112223566777788889999999999999999999999999999999999999999999999 999999
Q ss_pred HhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 043535 626 KESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLT 699 (881)
Q Consensus 626 ~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~ 699 (881)
+.++|+|+++..++.+..++..+|.+|+|++.+..|.++..+-.++...+.. .....-++|...+++.++.|.
T Consensus 617 r~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~a-lIw~~df~pfmvliiailnd~ 689 (942)
T KOG0205|consen 617 RSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA-LIWEFDFSPFMVLIIAILNDG 689 (942)
T ss_pred cccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999998887775442222221 112233555555665555553
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-79 Score=707.90 Aligned_cols=516 Identities=21% Similarity=0.299 Sum_probs=416.4
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCceE
Q 043535 80 VDTFKSFTVLILFVCAILSLAFGL---------------NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN---SIQVD 141 (881)
Q Consensus 80 ~~~f~~~~~~~ll~~ail~~~~~~---------------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~---~~~v~ 141 (881)
..||++|+.++++++++++++.++ .+.+.+++.+++..+.+.+++.+.++.++++.+ ..+++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 568999999999999999987651 222334444555555565666555554555544 23699
Q ss_pred EEeCCE-EEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCce---eecccEEeeCcee
Q 043535 142 VVRNKR-RQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPF---LLSGTKVVDGYGR 213 (881)
Q Consensus 142 V~Rdg~-~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~---l~aGt~v~~g~~~ 213 (881)
|+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .+||| |+ .|+.++.++. +|+||.+.+|++.
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES-~PV~K~~G~~~~~V~aGT~v~~G~~~ 185 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGES-APVIRESGGDFSSVTGGTRVLSDWIV 185 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCC-CceEeCCCCccCeEEeceEEEeeeEE
Confidence 999988 8999999999999999999999999999999975 99998 44 5555556555 9999999999999
Q ss_pred EEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh---h-----HHHHHHhhccccch
Q 043535 214 MLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLM-IL---D-----LNAVVNLIIPEGLP 284 (881)
Q Consensus 214 ~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~-~~---~-----~~~~l~i~iP~~L~ 284 (881)
++|+++|.+|.+||+.+.++..+.+++|++...+.+...+..+.++++...+.+ ++ . ...++.++|||+|+
T Consensus 186 i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~~l~~~iallV~aiP~alg 265 (679)
T PRK01122 186 IRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVALLVCLIPTTIG 265 (679)
T ss_pred EEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHcccchhh
Confidence 999999999999999999998888899999888887766655444333332222 11 1 11222444999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceee
Q 043535 285 LAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYK 364 (881)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 364 (881)
..++.....++++++++|+++|+.+++|++|++|++|||||||||+|+|++.+.......+..+ +.....+|+.+
T Consensus 266 ~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~-ll~~a~~~s~~---- 340 (679)
T PRK01122 266 GLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEE-LADAAQLSSLA---- 340 (679)
T ss_pred hHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHH-HHHHHHHhcCC----
Confidence 9999999999999999999999999999999999999999999999999998764321111222 33333333211
Q ss_pred ccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHh
Q 043535 365 RTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAM 444 (881)
Q Consensus 365 ~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~ 444 (881)
+.||.++|+++++....+.+.. +..++..+..||++.+++|++.+. + ..+.||++|.+++.
T Consensus 341 -----------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~pF~s~~~~~gv~~~---g---~~~~kGa~e~il~~ 401 (679)
T PRK01122 341 -----------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVPFSAQTRMSGVDLD---G---REIRKGAVDAIRRY 401 (679)
T ss_pred -----------CCCchHHHHHHHHHhhcCCCch--hhccccceeEeecCcCceEEEEEC---C---EEEEECCHHHHHHH
Confidence 2368899999987621333221 222456778999999988887542 2 46799999999999
Q ss_pred ccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHH
Q 043535 445 CSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQ 524 (881)
Q Consensus 445 c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~ 524 (881)
|... |. ..++++.+..++++++|.|++++|+ |++++|+++++|++|||++++|++||
T Consensus 402 ~~~~----g~------~~~~~~~~~~~~~a~~G~~~l~va~-------------~~~~lG~i~l~D~~R~~~~eai~~Lr 458 (679)
T PRK01122 402 VESN----GG------HFPAELDAAVDEVARKGGTPLVVAE-------------DNRVLGVIYLKDIVKPGIKERFAELR 458 (679)
T ss_pred HHhc----CC------cChHHHHHHHHHHHhCCCcEEEEEE-------------CCeEEEEEEEeccCchhHHHHHHHHH
Confidence 9641 21 1235677788899999999999993 67899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccC
Q 043535 525 YAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKD 604 (881)
Q Consensus 525 ~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND 604 (881)
++||+++|+|||++.||.++|+++|++. +++|++|+||.++|+.+|++|+.|+|+|||.||
T Consensus 459 ~~GI~vvMiTGDn~~TA~aIA~elGId~-------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvND 519 (679)
T PRK01122 459 KMGIKTVMITGDNPLTAAAIAAEAGVDD-------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTND 519 (679)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCcE-------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcch
Confidence 9999999999999999999999999987 999999999999999999999999999999999
Q ss_pred HHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Q 043535 605 APALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLT 664 (881)
Q Consensus 605 ~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 664 (881)
+|||++|||||||+ +|++.+|++||+|++++|+..+++++++||+..-.-...-.|++.
T Consensus 520 APALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 520 APALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred HHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 99999999999999 999999999999999999999999999999999654455667765
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-82 Score=748.21 Aligned_cols=676 Identities=22% Similarity=0.291 Sum_probs=542.9
Q ss_pred HhcccCCCccCCCCCC---cHHHHHHHHhhHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 58 RQGLFGSNTYKKPPTE---SFFSFVVDTFKSFTVLILFVCAILSLAFG-----LNLFIAVSIYISVSASSKYMQNKKFEK 129 (881)
Q Consensus 58 r~~~yG~N~i~~~~~~---~~~~~l~~~f~~~~~~~ll~~ail~~~~~-----~~~~~~i~~~~~i~~~~~~~~~~~~~~ 129 (881)
+...|-.|.+...|++ .+++.+++||+++.|++|++.+++++++- +..++|+++++.++++++..++.++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~ 107 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFVLGITAIKDAIEDYRRHK 107 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeeeehHHHHHHHHhhhhhhh
Confidence 5569999999988776 55688999999999999999999999872 167889999999999999999999999
Q ss_pred HHHhhhcCCceEEEeCCE-EEEEeccccccCcEEEEcCCCeeccceeEEeccc-----------------eeeecC----
Q 043535 130 LLSKVSNSIQVDVVRNKR-RQQILLSNVVVGDVICLKIGDQVPADGIFLDGHS-----------------LQIQES---- 187 (881)
Q Consensus 130 ~l~~~~~~~~v~V~Rdg~-~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~-----------------l~vdes---- 187 (881)
.|+..|+.++.|.|++. +++..|++|++||+|.+..++.+|||.++++++. +.+..+
T Consensus 108 -~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~ 186 (1151)
T KOG0206|consen 108 -QDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECT 186 (1151)
T ss_pred -ccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhh
Confidence 99988999999999644 8999999999999999999999999999998763 111000
Q ss_pred -------------------Cccc---------c----c-cCCCCceeecccEEeeC-ceeEEEEEEeccchhhHHHhhhc
Q 043535 188 -------------------DHNV---------E----V-NSSQNPFLLSGTKVVDG-YGRMLATAVGMNTTWGQIMRQTS 233 (881)
Q Consensus 188 -------------------~~~v---------~----~-~~~~~~~l~aGt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~ 233 (881)
.|+. . . ...+.+++++|+.+.+. .+.+.|+.||.+|.. +++..
T Consensus 187 ~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~---~~n~~ 263 (1151)
T KOG0206|consen 187 SKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKL---MQNSG 263 (1151)
T ss_pred hcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchH---HHhcC
Confidence 0000 0 0 11245678999999987 579999999999965 44455
Q ss_pred cCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------h------HHHHH------Hhhccccc
Q 043535 234 YNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL------------------D------LNAVV------NLIIPEGL 283 (881)
Q Consensus 234 ~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~------------------~------~~~~l------~i~iP~~L 283 (881)
.++.+++++++.++.....+..+.+.++++..+... + +..++ ..++|.+|
T Consensus 264 ~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISL 343 (1151)
T KOG0206|consen 264 KPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISL 343 (1151)
T ss_pred CCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEE
Confidence 688999999999999988877777766665554322 0 11112 22399999
Q ss_pred hHHHHHHHHHHHHH------Hh----hccccccCchhhhhccceEEEEecCccccccCceEEeecCC-------------
Q 043535 284 PLAVTVTIAYSMKR------LM----IDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHS------------- 340 (881)
Q Consensus 284 ~~~~~~~~~~~~~~------l~----~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~------------- 340 (881)
.+.+.+.....+.. |. ...+.+|+.+..|+||+|++|++|||||||+|.|++.++..
T Consensus 344 yvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~ 423 (1151)
T KOG0206|consen 344 YVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVE 423 (1151)
T ss_pred EEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhh
Confidence 98888776655422 22 23688999999999999999999999999999999888510
Q ss_pred ------C---------------------------CChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhc
Q 043535 341 ------N---------------------------IAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSW 387 (881)
Q Consensus 341 ------~---------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~ 387 (881)
. ........+..++++||++..+.. .++....|...+|+|.|+++.
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~-~~~~~~~Y~A~SPDE~AlV~a 502 (1151)
T KOG0206|consen 424 AALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKD-EDSGKLSYEAESPDEAALVEA 502 (1151)
T ss_pred cccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccC-CCccceeeecCCCcHHHHHHH
Confidence 0 011223345667888988766541 222245788999999999998
Q ss_pred ccccCCCChh------------hhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCce
Q 043535 388 PILGMSMDME------------QIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNV 455 (881)
Q Consensus 388 ~~~~~~~~~~------------~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~ 455 (881)
++ ..|..+. ...+.|++++..+|+|.|||||||+|.+++ ++.+|||||+..|.++++..
T Consensus 503 Ar-~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g-~i~LycKGADsvI~erL~~~------- 573 (1151)
T KOG0206|consen 503 AR-ELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDG-RILLYCKGADSVIFERLSKN------- 573 (1151)
T ss_pred HH-hcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCC-cEEEEEcCcchhhHhhhhhc-------
Confidence 87 7776442 124579999999999999999999999877 59999999999999999851
Q ss_pred ecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-------------------------ccccccCceeeeeccccC
Q 043535 456 KHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-------------------------EELNEENLILLGLLGIKD 510 (881)
Q Consensus 456 ~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-------------------------~~~~e~~l~~lG~i~~~D 510 (881)
....++.-.+++++|+.+|+|++++|||++++++ .+.+|+||+++|.+++||
T Consensus 574 ---~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIED 650 (1151)
T KOG0206|consen 574 ---GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIED 650 (1151)
T ss_pred ---chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeec
Confidence 2456677788999999999999999999998733 246799999999999999
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh-----cCC--------------------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR-----NYT-------------------------- 559 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-----~~~-------------------------- 559 (881)
+++++++++|++|++||||+||+|||+.+||.+|+.+|++..++.. ..+
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 730 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELE 730 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHH
Confidence 9999999999999999999999999999999999999999875111 000
Q ss_pred -------------------------HH---HHHHH--HhhheeeeccCHHHHHHHHHHHhhc-CCEEEEEcCCccCHHHH
Q 043535 560 -------------------------EE---EKMEK--VEKIYVMARASPDDKLAMVKCLKLK-GHVVAVTGNGIKDAPAL 608 (881)
Q Consensus 560 -------------------------~~---~~~~~--~~~~~v~~~~~p~~K~~~v~~l~~~-g~~v~~iGDg~ND~~~l 608 (881)
++ .+.+. -++..++||++|.||+.+|+..++. +..+++||||+||++|+
T Consensus 731 ~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMI 810 (1151)
T KOG0206|consen 731 EAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMI 810 (1151)
T ss_pred HHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchhe
Confidence 00 00111 1234599999999999999999855 88999999999999999
Q ss_pred HhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---h
Q 043535 609 EEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNP---L 685 (881)
Q Consensus 609 ~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~p---l 685 (881)
++|||||++++.++.+|..+||+.+.+..+.... ++.|||+.|.|+.+++.|.+|+|+.+.+.+|++.++++++. +
T Consensus 811 Q~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rL-LLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~y 889 (1151)
T KOG0206|consen 811 QEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERL-LLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLY 889 (1151)
T ss_pred eeCCcCeeeccchhhhhhhcccchHHHHHHHhhh-heeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Confidence 9999999999999999999999999998887777 88999999999999999999999999999999999998765 4
Q ss_pred hHHHHHHHHHHHHHHHHHHhc---ccCCCccccccCCCCC---CCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 686 TAVQLLWMNLIVLTLGALALV---TEQPTKELMEKPPVRL---TEPLITNVMWRNLLAQAFYQIAVLLTLLF 751 (881)
Q Consensus 686 ~~~q~l~~~~~~~~~~~l~l~---~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (881)
..+++.++|++++.+|.+.++ .|.+++.+++.|-.++ ....++...++.|+..++++++++|++.+
T Consensus 890 d~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~ 961 (1151)
T KOG0206|consen 890 DDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPY 961 (1151)
T ss_pred cceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeH
Confidence 466788899999999999996 3455666677765443 34478888888899999999988775443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-75 Score=677.38 Aligned_cols=519 Identities=20% Similarity=0.298 Sum_probs=414.2
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCc
Q 043535 80 VDTFKSFTVLILFVCAILSLAFGL-----------------NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN---SIQ 139 (881)
Q Consensus 80 ~~~f~~~~~~~ll~~ail~~~~~~-----------------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~---~~~ 139 (881)
..||++|..++++++++++++.++ .+.+.+++.+++..+.+.+++++.++.++++.+ ...
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 468999999999999999987632 112223333344444444455444444555543 335
Q ss_pred eEEEe-CCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCc---eeecccEEeeCc
Q 043535 140 VDVVR-NKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNP---FLLSGTKVVDGY 211 (881)
Q Consensus 140 v~V~R-dg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~---~l~aGt~v~~g~ 211 (881)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+. .+||| |+ .|+.++.++ .+|+||.+.+|+
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES-~PV~K~~g~~~~~V~aGT~v~~G~ 184 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGES-APVIKESGGDFASVTGGTRILSDW 184 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCC-CceeecCCCCcceeecCcEEEeeE
Confidence 78886 8999999999999999999999999999999999965 99998 33 555444554 399999999999
Q ss_pred eeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-h-------HHHHHHhhcccc
Q 043535 212 GRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMI-L-D-------LNAVVNLIIPEG 282 (881)
Q Consensus 212 ~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~-~-~-------~~~~l~i~iP~~ 282 (881)
+.++|+++|.+|++||+.+.++..+.+++|+|...+.+...+..+.+++.+..+.+. + . ...++.++|||+
T Consensus 185 ~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~~~~~~~~~lvallV~aiP~a 264 (675)
T TIGR01497 185 LVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTT 264 (675)
T ss_pred EEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHhCchh
Confidence 999999999999999999999988888999998888877666554443333322221 1 1 112224459999
Q ss_pred chHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccce
Q 043535 283 LPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGF 362 (881)
Q Consensus 283 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~ 362 (881)
|+...+.....++++++++|+++|+.+++|++|++|++|||||||||+|+|++.+.......+..+. ....++++.
T Consensus 265 Lg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~l-l~~aa~~~~--- 340 (675)
T TIGR01497 265 IGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTL-ADAAQLASL--- 340 (675)
T ss_pred hhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHH-HHHHHHhcC---
Confidence 8888887777899999999999999999999999999999999999999999988643221122222 233333321
Q ss_pred eeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHH
Q 043535 363 YKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIIL 442 (881)
Q Consensus 363 ~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~ 442 (881)
. +.||.++|+++++. +.+.+... ..++..+..||++.+++|++.+. ++ ..+.||++|.++
T Consensus 341 ---~---------s~hP~a~Aiv~~a~-~~~~~~~~--~~~~~~~~~pf~~~~~~sg~~~~--~g---~~~~kGa~e~i~ 400 (675)
T TIGR01497 341 ---A---------DDTPEGKSIVILAK-QLGIREDD--VQSLHATFVEFTAQTRMSGINLD--NG---RMIRKGAVDAIK 400 (675)
T ss_pred ---C---------CCCcHHHHHHHHHH-HcCCCccc--cccccceEEEEcCCCcEEEEEEe--CC---eEEEECCHHHHH
Confidence 1 24699999999887 55544322 12345678999999887776543 22 467899999999
Q ss_pred HhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHH
Q 043535 443 AMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVED 522 (881)
Q Consensus 443 ~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~ 522 (881)
+.|.. +|.. .++.+++.+++++++|.|++++|+ |.+++|+++++|++||+++++|++
T Consensus 401 ~~~~~----~g~~------~~~~~~~~~~~~a~~G~r~l~va~-------------~~~~lG~i~l~D~~Rp~a~eaI~~ 457 (675)
T TIGR01497 401 RHVEA----NGGH------IPTDLDQAVDQVARQGGTPLVVCE-------------DNRIYGVIYLKDIVKGGIKERFAQ 457 (675)
T ss_pred HHHHh----cCCC------CcHHHHHHHHHHHhCCCeEEEEEE-------------CCEEEEEEEecccchhHHHHHHHH
Confidence 88853 1211 124567778899999999999995 468999999999999999999999
Q ss_pred HHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCc
Q 043535 523 CQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGI 602 (881)
Q Consensus 523 l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ 602 (881)
||++|++++|+|||+..+|.++|+++|++. +++|++|++|.++++.+|++|+.|+|+|||.
T Consensus 458 l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~ 518 (675)
T TIGR01497 458 LRKMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGT 518 (675)
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 999999999999999999999999999987 8999999999999999999999999999999
Q ss_pred cCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 043535 603 KDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISV 667 (881)
Q Consensus 603 ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~ 667 (881)
||+|||++||+||||+ ++++.++++||++++++|+..+++++++||+.+-+-.....|++..++
T Consensus 519 NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~ 582 (675)
T TIGR01497 519 NDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDV 582 (675)
T ss_pred chHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccH
Confidence 9999999999999999 999999999999999999999999999999999998888889887655
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-75 Score=640.33 Aligned_cols=786 Identities=18% Similarity=0.215 Sum_probs=563.4
Q ss_pred CHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH--HHHHHH
Q 043535 32 GTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL--NLFIAV 109 (881)
Q Consensus 32 ~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~--~~~~~i 109 (881)
.+++....++.+ +|++ ++.+++.-.++||+|....+ .++|..+|+++-..|++.++.++..+|+...+ ..+..+
T Consensus 149 p~~~~~g~~~k~--~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDeyWYySlFtL 224 (1160)
T KOG0209|consen 149 PTDEPFGYFQKS--TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCLDEYWYYSLFTL 224 (1160)
T ss_pred CcCCcchhhhhc--cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHhHHHHHHHHHHH
Confidence 445556666654 5777 45457777788999999987 57889999999999999888888888887653 344445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceEEEeCCEEEEEeccccccCcEEEEcC---CCeeccceeEEeccceeee
Q 043535 110 SIYISVSASSKYMQNKKFEKLLSKVSNSI-QVDVVRNKRRQQILLSNVVVGDVICLKI---GDQVPADGIFLDGHSLQIQ 185 (881)
Q Consensus 110 ~~~~~i~~~~~~~~~~~~~~~l~~~~~~~-~v~V~Rdg~~~~I~~~~Lv~GDII~l~~---G~~vPaD~~ll~g~~l~vd 185 (881)
++++.+.+...+++-+.+.. .+++.++. .+.|+|+++|+.+.++||.|||+|.+.. ...||||.+++.|++ .||
T Consensus 225 fMli~fE~tlV~Qrm~~lse-~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVn 302 (1160)
T KOG0209|consen 225 FMLIAFEATLVKQRMRTLSE-FRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVN 302 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eec
Confidence 55566677667777777777 67776654 8999999999999999999999999987 568999999999998 899
Q ss_pred cC---CccccccC-----------------CCCceeecccEEee-------------CceeEEEEEEeccchhhHHHhhh
Q 043535 186 ES---DHNVEVNS-----------------SQNPFLLSGTKVVD-------------GYGRMLATAVGMNTTWGQIMRQT 232 (881)
Q Consensus 186 es---~~~v~~~~-----------------~~~~~l~aGt~v~~-------------g~~~~~V~~tG~~T~~g~i~~~~ 232 (881)
|+ ++++|.-+ ++.+.+|+||.+++ |-+.+.|++||.+|..|+++|.+
T Consensus 303 EaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRti 382 (1160)
T KOG0209|consen 303 EAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTI 382 (1160)
T ss_pred hhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeE
Confidence 87 11133211 14467999999985 56889999999999999999998
Q ss_pred ccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hHHHHH------HhhccccchHHHHHHHHHHHHHHhh
Q 043535 233 SYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL------DLNAVV------NLIIPEGLPLAVTVTIAYSMKRLMI 300 (881)
Q Consensus 233 ~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~------~~~~~l------~i~iP~~L~~~~~~~~~~~~~~l~~ 300 (881)
....++.|.-.+..--|.-++.+++++.+..+|.-+. .+.-++ +-++|+-||+-++++...+...|+|
T Consensus 383 lf~aervTaNn~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak 462 (1160)
T KOG0209|consen 383 LFSAERVTANNRETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAK 462 (1160)
T ss_pred EecceeeeeccHHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHH
Confidence 8877766654433322222222222222221111111 122222 3449999999999999999999999
Q ss_pred ccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChH--------HHHHHHHHhhhccccceeeccCCCCcc
Q 043535 301 DHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPK--------VVELIQQGFALNTTAGFYKRTSGSGLE 372 (881)
Q Consensus 301 ~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~ 372 (881)
.+++|..+-.+.-.|++|+.|||||||||+..|.+.++.....++ ....-.+.++.||+.... +
T Consensus 463 ~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~l--------e 534 (1160)
T KOG0209|consen 463 LGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLL--------E 534 (1160)
T ss_pred hceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHh--------c
Confidence 999999999999999999999999999999999998863311110 011112234445442221 2
Q ss_pred eeecCChHHHHHHhcccccCCCCh-----hhhhhcceEEEEecCCCCCceEEEEEeeCCC---CeEEEEEeCCHHHHHHh
Q 043535 373 IELSGSSIEKAILSWPILGMSMDM-----EQIRQSCVILQVEAFNSHRKQSRVMMRKKAD---NTVHVHWKGAAEIILAM 444 (881)
Q Consensus 373 ~~~~~~p~e~al~~~~~~~~~~~~-----~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~---~~~~l~~KGa~e~i~~~ 444 (881)
....|||.|+|.++...|...-+- +...+..++.+.+.|+|..|||+|++..... .++.+.+|||||.|.++
T Consensus 535 ~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~m 614 (1160)
T KOG0209|consen 535 DKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEM 614 (1160)
T ss_pred CcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHH
Confidence 247999999999998765443221 1111246789999999999999999986542 35899999999999987
Q ss_pred ccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC--------CcccccccCceeeeeccccCCCCccH
Q 043535 445 CSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV--------PEEELNEENLILLGLLGIKDPCRPGL 516 (881)
Q Consensus 445 c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~--------~~~~~~e~~l~~lG~i~~~D~~r~~~ 516 (881)
.. +.++++++...+|+.+|.||+|++||.+.. .+++..|+||+|.|++.|.-|+|+|+
T Consensus 615 l~--------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds 680 (1160)
T KOG0209|consen 615 LR--------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDS 680 (1160)
T ss_pred HH--------------hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccH
Confidence 65 346788999999999999999999999974 34788999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh-------------------hh---------------------
Q 043535 517 KKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-------------------FR--------------------- 556 (881)
Q Consensus 517 ~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-------------------~~--------------------- 556 (881)
+++|+.|++.+++++|+||||+.||.++|+++|+.... .+
T Consensus 681 ~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~d 760 (1160)
T KOG0209|consen 681 KKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHD 760 (1160)
T ss_pred HHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhh
Confidence 99999999999999999999999999999999997640 00
Q ss_pred ---------cC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHH--
Q 043535 557 ---------NY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV-- 624 (881)
Q Consensus 557 ---------~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~-- 624 (881)
.+ ..+.+.+.+.++.||||+.|.||..++..+++.|+.++|||||.||+.|||+||||||.- ++.+.
T Consensus 761 lcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~ 839 (1160)
T KOG0209|consen 761 LCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESK 839 (1160)
T ss_pred hhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhh
Confidence 00 012345667778899999999999999999999999999999999999999999999986 33221
Q ss_pred ---------------------------------------------------------------------HHhhcCeeecc
Q 043535 625 ---------------------------------------------------------------------AKESSDIIILD 635 (881)
Q Consensus 625 ---------------------------------------------------------------------a~~~ad~vl~~ 635 (881)
|.-+|.+.-..
T Consensus 840 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~ 919 (1160)
T KOG0209|consen 840 KDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKL 919 (1160)
T ss_pred hHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCcccccccccccccccccc
Confidence 11234444444
Q ss_pred CCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCcccc
Q 043535 636 DNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELM 715 (881)
Q Consensus 636 ~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~ 715 (881)
.+.+++.+.|+.||+...+.-+.+...-...++.. ...+.++.-..-+++.|...-.+++ ....+.+...+|-+.+.
T Consensus 920 asv~~v~~IIrQGRctLVtTlQMfKILALN~LisA--YslSvlyldGVKfgD~QaTisGlLl-a~cFlfISrskPLetLS 996 (1160)
T KOG0209|consen 920 ASVSSVTHIIRQGRCTLVTTLQMFKILALNCLISA--YSLSVLYLDGVKFGDTQATISGLLL-AACFLFISRSKPLETLS 996 (1160)
T ss_pred chHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH--HHHHHhhhcCceecchhHhHHHHHH-HHHHhheecCCchhhHh
Confidence 56788899999999999987776654433222221 1222344444556666655533332 22345566788888888
Q ss_pred ccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccc----cC------CCcccchhHHHHHHHHHHHHhhHhhhc
Q 043535 716 EKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESV----LG------VNENVKDTMIFNTFVLCQVFNEFNARK 785 (881)
Q Consensus 716 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------~~~~~~~t~~f~~~v~~~~~~~~~~r~ 785 (881)
+.+|. .++++.-.+..++.|-..++...+++.-..... .+ ++++..+|.+|..-...|+..+.. .
T Consensus 997 keRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAV--N 1071 (1160)
T KOG0209|consen 997 KERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAV--N 1071 (1160)
T ss_pred hcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhh--h
Confidence 87773 457777777777777666666555443222111 11 125556788888777778876543 2
Q ss_pred cccccccccCcchHHHHHHHHHHHHHHHHHH----HHhhhhhcCCCCChhhHHHH----HHHHHHHHHHHHHHHhcc
Q 043535 786 LEKKNVFKGIHKNKSFLGIIGITIVLQVVMV----EILKKFADTEGLNWIQWGSC----IGIAAISWPIGWFVKCIP 854 (881)
Q Consensus 786 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~f~~~~l~~~~~~~~----~~~~~~~~~~~~l~k~~~ 854 (881)
..+.||...+..|+.+..+++++..+.+.+. +=++..|...+++-.+-..+ .+-.+++|++..+.+++-
T Consensus 1072 Y~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f 1148 (1160)
T KOG0209|consen 1072 YQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFF 1148 (1160)
T ss_pred ccCcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2366788889999988777776655444433 33566788888874332222 222345566665555543
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-72 Score=651.44 Aligned_cols=456 Identities=25% Similarity=0.353 Sum_probs=389.3
Q ss_pred CCceEEEe-CCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCceeecccEEeeCc
Q 043535 137 SIQVDVVR-NKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGY 211 (881)
Q Consensus 137 ~~~v~V~R-dg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~ 211 (881)
+.++++++ ||++++||.+||+|||+|.|+|||+||+||++++|++ .+||| |+ +|+.+..|+.+++||.+.+|.
T Consensus 210 p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs-~PV~k~~Gd~V~aGtiN~~G~ 287 (713)
T COG2217 210 PKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGES-LPVEKKPGDEVFAGTVNLDGS 287 (713)
T ss_pred CCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCC-CCEecCCCCEEeeeEEECCcc
Confidence 34776776 5668999999999999999999999999999999999 99999 55 888888999999999999999
Q ss_pred eeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hHH-------HHHHhhc
Q 043535 212 GRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL-----DLN-------AVVNLII 279 (881)
Q Consensus 212 ~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~-----~~~-------~~l~i~i 279 (881)
.+.+|+++|.+|.+++|.+.+++++..++|.|+..++++.++++..+++++++|++|+ ++. .++.++|
T Consensus 288 l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaC 367 (713)
T COG2217 288 LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIAC 367 (713)
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeC
Confidence 9999999999999999999999999999999999999999999999998888888663 222 3334559
Q ss_pred cccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccc
Q 043535 280 PEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTT 359 (881)
Q Consensus 280 P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~ 359 (881)
||+|.+++|+++..++.+.+++|+++|+.+++|.++++|+++||||||||+|+|++.++..... +..+.+..+.++.
T Consensus 368 PCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~e~~~L~laAalE-- 444 (713)
T COG2217 368 PCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-DEDELLALAAALE-- 444 (713)
T ss_pred ccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-CHHHHHHHHHHHH--
Confidence 9999999999999999999999999999999999999999999999999999999999765433 3344444443332
Q ss_pred cceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHH
Q 043535 360 AGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAE 439 (881)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e 439 (881)
..+.||+.+|+++++. ..+.. . .+..+.+| ..++..+. ++..+.+ |+++
T Consensus 445 --------------~~S~HPiA~AIv~~a~-~~~~~--~----~~~~~~i~------G~Gv~~~v-~g~~v~v---G~~~ 493 (713)
T COG2217 445 --------------QHSEHPLAKAIVKAAA-ERGLP--D----VEDFEEIP------GRGVEAEV-DGERVLV---GNAR 493 (713)
T ss_pred --------------hcCCChHHHHHHHHHH-hcCCC--C----ccceeeec------cCcEEEEE-CCEEEEE---cCHH
Confidence 2356899999999776 33311 0 01122222 33444433 3444544 9998
Q ss_pred HHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHH
Q 043535 440 IILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKA 519 (881)
Q Consensus 440 ~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~ 519 (881)
.+.+.-... + . ..+..+.+..+|..++.++ .|.+++|+++++|++|++++++
T Consensus 494 ~~~~~~~~~----------~----~-~~~~~~~~~~~G~t~v~va-------------~dg~~~g~i~~~D~~R~~a~~a 545 (713)
T COG2217 494 LLGEEGIDL----------P----L-LSERIEALESEGKTVVFVA-------------VDGKLVGVIALADELRPDAKEA 545 (713)
T ss_pred HHhhcCCCc----------c----c-hhhhHHHHHhcCCeEEEEE-------------ECCEEEEEEEEeCCCChhHHHH
Confidence 886532110 0 1 3455677788888877777 4669999999999999999999
Q ss_pred HHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEc
Q 043535 520 VEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTG 599 (881)
Q Consensus 520 I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iG 599 (881)
|++||+.|++++|+|||+..+|.++|+++||+. +++.+.|++|.++|+.+|++|++|+|+|
T Consensus 546 I~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-------------------v~AellPedK~~~V~~l~~~g~~VamVG 606 (713)
T COG2217 546 IAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-------------------VRAELLPEDKAEIVRELQAEGRKVAMVG 606 (713)
T ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-------------------heccCCcHHHHHHHHHHHhcCCEEEEEe
Confidence 999999999999999999999999999999987 9999999999999999999999999999
Q ss_pred CCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 600 NGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 600 Dg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
||.||+|+|..|||||||| .|+|.++++||++++++|+..++++++.+|++++++++|+.|++.+|.+.+.+..++
T Consensus 607 DGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 607 DGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred CCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 799999999999999999999999999999999999999999999999998877765
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-68 Score=635.93 Aligned_cols=476 Identities=20% Similarity=0.273 Sum_probs=395.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC--
Q 043535 112 YISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES-- 187 (881)
Q Consensus 112 ~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes-- 187 (881)
++.+....+.+++++.++.++++.+ +.+++|+|||++++|++++|+|||+|.|++||+|||||++++|+. .+|||
T Consensus 215 l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~l 293 (741)
T PRK11033 215 LFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESAL 293 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-Eeecccc
Confidence 3444555555555555555666543 358999999999999999999999999999999999999999986 99998
Q ss_pred --CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 188 --DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGL 265 (881)
Q Consensus 188 --~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~ 265 (881)
|+ .|+.+..|+.+|+||.+.+|.++++|+++|.+|.+||+.+.+++.+.+++|+|+.+++++.+++++.++++++++
T Consensus 294 TGEs-~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~ 372 (741)
T PRK11033 294 TGES-IPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVI 372 (741)
T ss_pred cCCC-CCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 666666999999999999999999999999999999999999998889999999999999999999999888888
Q ss_pred HHHh-----h-------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCce
Q 043535 266 LMIL-----D-------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQM 333 (881)
Q Consensus 266 ~~~~-----~-------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m 333 (881)
+++. + ..+++.+.|||+|.+++|+++..+..+++|+|+++|+.+++|+|+++|++|||||||||+|+|
T Consensus 373 ~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~ 452 (741)
T PRK11033 373 LVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKP 452 (741)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCce
Confidence 7652 1 223445569999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCC
Q 043535 334 KGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNS 413 (881)
Q Consensus 334 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s 413 (881)
++.+.......+..+.+..+.... ..+.||+++|+++++. +.+.+ +||.+
T Consensus 453 ~v~~~~~~~~~~~~~~l~~aa~~e----------------~~s~hPia~Ai~~~a~-~~~~~-------------~~~~~ 502 (741)
T PRK11033 453 QVTDIHPATGISESELLALAAAVE----------------QGSTHPLAQAIVREAQ-VRGLA-------------IPEAE 502 (741)
T ss_pred EEEEEEecCCCCHHHHHHHHHHHh----------------cCCCCHHHHHHHHHHH-hcCCC-------------CCCCc
Confidence 998874322111223333222111 1246899999999876 33322 35555
Q ss_pred CCceE---EEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC
Q 043535 414 HRKQS---RVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV 490 (881)
Q Consensus 414 ~~k~~---sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~ 490 (881)
+++.+ ++.... ++..+. -|+++.+.+ ++ +.+.+.++++..+|++++++|+
T Consensus 503 ~~~~~~g~Gv~~~~-~g~~~~---ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~va~----- 555 (741)
T PRK11033 503 SQRALAGSGIEGQV-NGERVL---ICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLVLR----- 555 (741)
T ss_pred ceEEEeeEEEEEEE-CCEEEE---Eecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEEEE-----
Confidence 55554 222222 343343 488887643 11 2234456778899999999994
Q ss_pred CcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhh
Q 043535 491 PEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKI 570 (881)
Q Consensus 491 ~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~ 570 (881)
|.+++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|+.
T Consensus 556 --------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------- 608 (741)
T PRK11033 556 --------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------- 608 (741)
T ss_pred --------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------
Confidence 56899999999999999999999999999999999999999999999999996
Q ss_pred eeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHH
Q 043535 571 YVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRC 650 (881)
Q Consensus 571 ~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~ 650 (881)
.+++..|++|.++++.+++. +.|+|+|||.||+|||+.|||||+|+ ++++.++++||+++.++++..+.++++.||+
T Consensus 609 -~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~ 685 (741)
T PRK11033 609 -FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRA 685 (741)
T ss_pred -eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHH
Confidence 46789999999999999965 58999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 651 VYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 651 ~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
++.|+++++.|.+.+|++.+.+.+++
T Consensus 686 ~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 686 THANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999887766543
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-67 Score=610.90 Aligned_cols=459 Identities=36% Similarity=0.521 Sum_probs=391.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC---
Q 043535 111 IYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES--- 187 (881)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes--- 187 (881)
+..+++...+++.++..+++.++..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|++ .+|||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vdes~LT 85 (499)
T TIGR01494 8 LFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDESNLT 85 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEccccc
Confidence 344455555555555555533333456799999999 9999999999999999999999999999999976 99998
Q ss_pred -CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHH-HHHHHHHHHHHHHHH
Q 043535 188 -DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLT-SLVDLIGLAITFSGL 265 (881)
Q Consensus 188 -~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~-~~~~~i~l~~~~~~~ 265 (881)
|+ .|+.+.+++.+++||.+.+|+..+.|+++|.+|..+++...+......++++++..+++. .++.++.++++++.+
T Consensus 86 GEs-~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~ 164 (499)
T TIGR01494 86 GES-VPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVF 164 (499)
T ss_pred CCC-CCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 666666899999999999999999999999999999999988777777899999999998 677777666666665
Q ss_pred HHHh----h---H-------HHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccC
Q 043535 266 LMIL----D---L-------NAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLN 331 (881)
Q Consensus 266 ~~~~----~---~-------~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~ 331 (881)
+++. + + ..++.++|||+|+++++++...+..+++++|+++|+++++|+||++|++|||||||||+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~ 244 (499)
T TIGR01494 165 LFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKN 244 (499)
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccC
Confidence 5442 1 1 123345599999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecC
Q 043535 332 QMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAF 411 (881)
Q Consensus 332 ~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F 411 (881)
+|++.++..... .+.++||+|.|+++++. . +.+...||
T Consensus 245 ~~~v~~~~~~~~-----------------------------~~~s~hp~~~ai~~~~~-~------------~~~~~~~f 282 (499)
T TIGR01494 245 EMSFKKVSVLGG-----------------------------EYLSGHPDERALVKSAK-W------------KILNVFEF 282 (499)
T ss_pred ceEEEEEEecCC-----------------------------CcCCCChHHHHHHHHhh-h------------cCcceecc
Confidence 999987632110 12467899999999876 2 11356799
Q ss_pred CCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCC
Q 043535 412 NSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVP 491 (881)
Q Consensus 412 ~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~ 491 (881)
++.+++|+++++.+++ .++||+++.+.++|.+ +.+..++++.+|+|++++|++.
T Consensus 283 ~~~~~~~~~~~~~~~~----~~~~G~~~~i~~~~~~------------------~~~~~~~~~~~g~~~~~~a~~~---- 336 (499)
T TIGR01494 283 SSVRKRMSVIVRGPDG----TYVKGAPEFVLSRVKD------------------LEEKVKELAQSGLRVLAVASKE---- 336 (499)
T ss_pred CCCCceEEEEEecCCc----EEEeCCHHHHHHhhHH------------------HHHHHHHHHhCCCEEEEEEECC----
Confidence 9999999999986322 3689999999998852 1233456778999999999643
Q ss_pred cccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhe
Q 043535 492 EEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIY 571 (881)
Q Consensus 492 ~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~ 571 (881)
+++|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 337 ---------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------- 386 (499)
T TIGR01494 337 ---------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------- 386 (499)
T ss_pred ---------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------
Confidence 79999999999999999999999999999999999999999999999986
Q ss_pred eeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHH
Q 043535 572 VMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCV 651 (881)
Q Consensus 572 v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~ 651 (881)
+++++|++|.++++.+|+.|+.|+|+|||.||++|++.|||||+|+ ++++||+++.++++..+..++.+||+.
T Consensus 387 -~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~ 459 (499)
T TIGR01494 387 -FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKT 459 (499)
T ss_pred -eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999996 688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 652 YVNIQKFIQFHLTISVSSVLFNFLAA 677 (881)
Q Consensus 652 ~~~i~~~i~~~~~~n~~~i~~~~~~~ 677 (881)
++++++++.|.+++|+..+.+.+++.
T Consensus 460 ~~~i~~~~~~~~~~n~~~~~~a~~~~ 485 (499)
T TIGR01494 460 FSTIKSNIFWAIAYNLILIPLAALLA 485 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999877776543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-66 Score=609.81 Aligned_cols=505 Identities=24% Similarity=0.339 Sum_probs=403.6
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCC-EEEEEeccccccCcEEEEcC
Q 043535 91 LFVCAILSLAFGL-NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNK-RRQQILLSNVVVGDVICLKI 166 (881)
Q Consensus 91 ll~~ail~~~~~~-~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg-~~~~I~~~~Lv~GDII~l~~ 166 (881)
..++++++++.+. .....++++.++....+++++++.++.++++.+ +..++|+||| ++++|++++|+|||+|.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~ 84 (556)
T TIGR01525 5 MALATIAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRP 84 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECC
Confidence 3444455555543 333344445555566666666665555666543 3479999996 99999999999999999999
Q ss_pred CCeeccceeEEeccceeeecC----CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChH
Q 043535 167 GDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLL 242 (881)
Q Consensus 167 G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 242 (881)
||+|||||++++|+. .+||| |+ .|+.+.+++.+|+||.+.+|+++++|++||.+|++|++.+.+.+.+.+++++
T Consensus 85 G~~iP~Dg~vi~g~~-~vdes~lTGEs-~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~ 162 (556)
T TIGR01525 85 GERIPVDGVVISGES-EVDESALTGES-MPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPI 162 (556)
T ss_pred CCEeccceEEEecce-EEeehhccCCC-CCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcH
Confidence 999999999999986 99998 44 6666668999999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh------h---HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhh
Q 043535 243 KARVRKLTSLVDLIGLAITFSGLLMIL------D---LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACET 313 (881)
Q Consensus 243 ~~~~~~~~~~~~~i~l~~~~~~~~~~~------~---~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~ 313 (881)
++.+++++.++.+++++++++.+++++ . ..+++.+.|||+|++++|+++..+..+++++|+++|+++++|.
T Consensus 163 ~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~ 242 (556)
T TIGR01525 163 QRLADRIASYYVPAVLAIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEK 242 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHH
Confidence 999999999999999988888888774 1 2233445599999999999999999999999999999999999
Q ss_pred ccceEEEEecCccccccCceEEeecCCCCChH--HHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhccccc
Q 043535 314 MGSATVICTDKTGTLTLNQMKGAADHSNIAPK--VVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILG 391 (881)
Q Consensus 314 lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~ 391 (881)
+|++|++|||||||||+|+|++.+........ ..+.+..+..+. ..+.||++.|+++++. +
T Consensus 243 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e----------------~~~~hp~~~Ai~~~~~-~ 305 (556)
T TIGR01525 243 LAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALAAALE----------------QSSSHPLARAIVRYAK-K 305 (556)
T ss_pred hhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHh----------------ccCCChHHHHHHHHHH-h
Confidence 99999999999999999999998864322111 222222211111 1246899999999887 4
Q ss_pred CCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCC-CeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHH
Q 043535 392 MSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKAD-NTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQII 470 (881)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~-~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 470 (881)
.+.+... . + ..+.++ .+ ++.... ++ .++ ..|+++.+. .. +. . ...+.+..
T Consensus 306 ~~~~~~~--~-~-~~~~~~----~~--gi~~~~-~g~~~~---~lg~~~~~~--~~------~~--~-----~~~~~~~~ 356 (556)
T TIGR01525 306 RGLELPK--Q-E-DVEEVP----GK--GVEATV-DGQEEV---RIGNPRLLE--LA------AE--P-----ISASPDLL 356 (556)
T ss_pred cCCCccc--c-c-CeeEec----CC--eEEEEE-CCeeEE---EEecHHHHh--hc------CC--C-----chhhHHHH
Confidence 4443221 0 0 111111 11 222222 22 223 348877651 10 00 0 11123445
Q ss_pred HHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcC
Q 043535 471 QGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAG-VNIKMITGDNIFTAKAIATQCG 549 (881)
Q Consensus 471 ~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~g 549 (881)
+++.++|+|++.++ .|.+++|.+.++|+++|+++++|++|+++| ++++|+|||+..++.++++++|
T Consensus 357 ~~~~~~g~~~~~v~-------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lg 423 (556)
T TIGR01525 357 NEGESQGKTVVFVA-------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELG 423 (556)
T ss_pred HHHhhCCcEEEEEE-------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhC
Confidence 67788999999888 366899999999999999999999999999 9999999999999999999999
Q ss_pred CCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhc
Q 043535 550 ILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESS 629 (881)
Q Consensus 550 i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~a 629 (881)
+.. +|++..|++|.++++.+++.++.|+|+|||.||++|++.||+|+++| ++.+.+++.|
T Consensus 424 i~~-------------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~A 483 (556)
T TIGR01525 424 IDE-------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAA 483 (556)
T ss_pred CCe-------------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhC
Confidence 986 89999999999999999999999999999999999999999999999 8999999999
Q ss_pred CeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 630 DIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 630 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
|+++.++++..+.++++.||+.+.|+++++.|.+.+|+..+.+.+++
T Consensus 484 d~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 484 DIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred CEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988766654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-67 Score=596.65 Aligned_cols=515 Identities=23% Similarity=0.313 Sum_probs=411.9
Q ss_pred HHHHHHHHHHHHHH---HHhhhc--CCceEEEeCCE-EEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC---
Q 043535 117 ASSKYMQNKKFEKL---LSKVSN--SIQVDVVRNKR-RQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES--- 187 (881)
Q Consensus 117 ~~~~~~~~~~~~~~---l~~~~~--~~~v~V~Rdg~-~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes--- 187 (881)
.+.+|.+.+...+. +.++.+ +..+.++-+|+ +++|+.+.|++||+|.|.||++||+||++++|++ .||||
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iT 430 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLIT 430 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhcc
Confidence 34455555443332 333322 34788999986 8899999999999999999999999999999999 99998
Q ss_pred -CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 188 -DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLL 266 (881)
Q Consensus 188 -~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~ 266 (881)
|+ +|+.++.++.+.+||.+.+|...+.++++|.+|.+++|.+.+++++..++|+|+.+|+++.++++..+++++++++
T Consensus 431 GEs-~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~ 509 (951)
T KOG0207|consen 431 GES-MPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFV 509 (951)
T ss_pred CCc-eecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHH
Confidence 55 7777779999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHhh-----------HHHHH-----------HhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecC
Q 043535 267 MILD-----------LNAVV-----------NLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDK 324 (881)
Q Consensus 267 ~~~~-----------~~~~l-----------~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DK 324 (881)
+|.- +...+ .++|||+|.++.|++...+....+++|+++|..+.+|.+.++++++|||
T Consensus 510 ~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 510 VWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred HHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 8761 11111 2339999999999999999999999999999999999999999999999
Q ss_pred ccccccCceEEeecCCCCCh-HHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcc
Q 043535 325 TGTLTLNQMKGAADHSNIAP-KVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSC 403 (881)
Q Consensus 325 TGTLT~~~m~v~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~ 403 (881)
|||||+|++.+.+.....++ ...+.+.-..+. ++ -+.||+.+|+++|++ +..... ...
T Consensus 590 TGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~---------Es-------~SeHPig~AIv~yak-~~~~~~----~~~ 648 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNPISLKEALALVAAM---------ES-------GSEHPIGKAIVDYAK-EKLVEP----NPE 648 (951)
T ss_pred CCceecceEEEEEEEecCCcccHHHHHHHHHHH---------hc-------CCcCchHHHHHHHHH-hccccc----Ccc
Confidence 99999999999987443332 122222111111 11 246899999999998 433111 111
Q ss_pred eEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhh
Q 043535 404 VILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAF 483 (881)
Q Consensus 404 ~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~ 483 (881)
.......|..+... +-+.. +++++ +-|+-+.+...-.. ..+++++.+++....|..+..+
T Consensus 649 ~~~~~~~~pg~g~~--~~~~~-~~~~i---~iGN~~~~~r~~~~--------------~~~~i~~~~~~~e~~g~tvv~v 708 (951)
T KOG0207|consen 649 GVLSFEYFPGEGIY--VTVTV-DGNEV---LIGNKEWMSRNGCS--------------IPDDILDALTESERKGQTVVYV 708 (951)
T ss_pred ccceeecccCCCcc--cceEE-eeeEE---eechHHHHHhcCCC--------------CchhHHHhhhhHhhcCceEEEE
Confidence 11222222222211 22222 22233 34888888653221 1234667777788899999888
Q ss_pred hhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHH
Q 043535 484 AHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEK 563 (881)
Q Consensus 484 a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 563 (881)
+ .|.+++|++.++|++|+|+..+|+.||+.|++++|+||||..+|.++|+++|++.
T Consensus 709 ~-------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------- 764 (951)
T KOG0207|consen 709 A-------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------- 764 (951)
T ss_pred E-------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------
Confidence 8 4779999999999999999999999999999999999999999999999999887
Q ss_pred HHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHH
Q 043535 564 MEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 564 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~ 643 (881)
|++...|+||.+.|+.+|+++..|+|+|||.||+|+|.+|||||+|+ .|++.|.++||+|++.||+.+++.
T Consensus 765 --------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ 835 (951)
T KOG0207|consen 765 --------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPF 835 (951)
T ss_pred --------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHH
Confidence 99999999999999999999999999999999999999999999999 889999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHhcc
Q 043535 644 LLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG--KNPLTAVQLLWMNLIVLTLGALALVT 707 (881)
Q Consensus 644 ~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~--~~pl~~~q~l~~~~~~~~~~~l~l~~ 707 (881)
++..+|++..|++.|+.|++.||+..+.+.....+..+ -.|..+.-.+..+.+..++.++.|-+
T Consensus 836 ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~ 901 (951)
T KOG0207|consen 836 AIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKR 901 (951)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhh
Confidence 99999999999999999999999998877665543333 12333333455566666666666643
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=597.40 Aligned_cols=488 Identities=22% Similarity=0.314 Sum_probs=394.0
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCceEEEeCCEEEEEeccccccCcEEEEcC
Q 043535 90 ILFVCAILSLAFG-LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVS--NSIQVDVVRNKRRQQILLSNVVVGDVICLKI 166 (881)
Q Consensus 90 ~ll~~ail~~~~~-~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~--~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~ 166 (881)
+++++++++++.+ +.....+++++++....+.+++++.++.++++. ++.+++|+|||+++++++++|+|||+|.+++
T Consensus 4 l~~~a~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~ 83 (536)
T TIGR01512 4 LMALAALGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKP 83 (536)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcC
Confidence 3445555555554 322233334444555555556666655576665 3468999999999999999999999999999
Q ss_pred CCeeccceeEEeccceeeecC----CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChH
Q 043535 167 GDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLL 242 (881)
Q Consensus 167 G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 242 (881)
||+|||||++++|+. .|||| |+ .|..+..++.+|+||.+.+|+++++|++||.+|++|++.+.+.+.+.+++++
T Consensus 84 G~~iP~Dg~ii~g~~-~vdes~lTGEs-~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~ 161 (536)
T TIGR01512 84 GERVPVDGVVLSGTS-TVDESALTGES-VPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKT 161 (536)
T ss_pred CCEeecceEEEeCcE-EEEecccCCCC-CcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChH
Confidence 999999999999987 99998 44 6666668999999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh---h-------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhh
Q 043535 243 KARVRKLTSLVDLIGLAITFSGLLMIL---D-------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACE 312 (881)
Q Consensus 243 ~~~~~~~~~~~~~i~l~~~~~~~~~~~---~-------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e 312 (881)
++.+++++.++.++.++++++.+++++ . ..+++.++|||+|++++|+++..+..+++++|+++|+++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le 241 (536)
T TIGR01512 162 QRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALE 241 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHH
Confidence 999999999999999888887777654 1 223334459999999999999999999999999999999999
Q ss_pred hccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccC
Q 043535 313 TMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGM 392 (881)
Q Consensus 313 ~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~ 392 (881)
++|++|++|||||||||+|+|++.+... .+.+..+.++. ..+.||.+.|+++++. +.
T Consensus 242 ~l~~v~~i~fDKTGTLT~~~~~v~~~~~------~~~l~~a~~~e----------------~~~~hp~~~Ai~~~~~-~~ 298 (536)
T TIGR01512 242 ALAKIKTVAFDKTGTLTTGRPKVVDVVP------AEVLRLAAAAE----------------QASSHPLARAIVDYAR-KR 298 (536)
T ss_pred hhcCCCEEEECCCCCCcCCceEEEEeeH------HHHHHHHHHHh----------------ccCCCcHHHHHHHHHH-hc
Confidence 9999999999999999999999988643 12332222111 1246899999999876 32
Q ss_pred CCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHH
Q 043535 393 SMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQG 472 (881)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~ 472 (881)
+ .....+..| ..++.... ++.++. .|+++.+.+... ..
T Consensus 299 ~--------~~~~~~~~~------g~gi~~~~-~g~~~~---ig~~~~~~~~~~------------------------~~ 336 (536)
T TIGR01512 299 E--------NVESVEEVP------GEGVRAVV-DGGEVR---IGNPRSLEAAVG------------------------AR 336 (536)
T ss_pred C--------CCcceEEec------CCeEEEEE-CCeEEE---EcCHHHHhhcCC------------------------cc
Confidence 2 111112221 11222222 333333 488876533110 03
Q ss_pred HHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCC
Q 043535 473 MAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV-NIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 473 ~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
+..+|.+++.++ .|..++|.+.++|++||+++++|++|+++|+ +++|+|||+..++..+++++|+.
T Consensus 337 ~~~~~~~~~~v~-------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~ 403 (536)
T TIGR01512 337 PESAGKTIVHVA-------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID 403 (536)
T ss_pred hhhCCCeEEEEE-------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh
Confidence 445566655544 5789999999999999999999999999999 99999999999999999999998
Q ss_pred chhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCe
Q 043535 552 KPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI 631 (881)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~ 631 (881)
. +|++..|++|.++++.+++.++.|+|+|||.||++|++.||+||++|.++++.++..||+
T Consensus 404 ~-------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 404 E-------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADV 464 (536)
T ss_pred h-------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCE
Confidence 6 789999999999999999999999999999999999999999999986688999999999
Q ss_pred eeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 632 IILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 632 vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
++.++++..+.+++..||++++++++++.|.+.+|++.+.+.+++
T Consensus 465 vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 465 VLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999888776654
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-65 Score=592.27 Aligned_cols=471 Identities=25% Similarity=0.329 Sum_probs=383.7
Q ss_pred HHHHHHHHHHHHHHHhhhc--CCceEEEeC-CEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----Ccc
Q 043535 118 SSKYMQNKKFEKLLSKVSN--SIQVDVVRN-KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHN 190 (881)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~--~~~v~V~Rd-g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~ 190 (881)
+.+.+.+++.++.++++.+ +.+++|+|+ |++++|++++|+|||+|.|++||+|||||++++|++ .+||| |+
T Consensus 69 ~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs- 146 (562)
T TIGR01511 69 WLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGES- 146 (562)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCC-
Confidence 3333333344443555543 347888885 677999999999999999999999999999999997 99998 55
Q ss_pred ccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 043535 191 VEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL- 269 (881)
Q Consensus 191 v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~- 269 (881)
.|+.+..++.+|+||.+.+|+++++|+++|.+|.+|++.+.+.+.+.+++++++.+++++.+++++.++++++.+++|.
T Consensus 147 ~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~~ 226 (562)
T TIGR01511 147 LPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLF 226 (562)
T ss_pred CcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777779999999999999999999999999999999999999888899999999999999999998888888777654
Q ss_pred ---hHHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHH
Q 043535 270 ---DLNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKV 346 (881)
Q Consensus 270 ---~~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~ 346 (881)
...+++.+.|||+|++++|+++..++.+++++|+++|+++++|.|+++|++|||||||||+|+|++.+.......+.
T Consensus 227 ~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~ 306 (562)
T TIGR01511 227 ALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRDR 306 (562)
T ss_pred HHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCCH
Confidence 23345566699999999999999999999999999999999999999999999999999999999988643222112
Q ss_pred HHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCC
Q 043535 347 VELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKA 426 (881)
Q Consensus 347 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~ 426 (881)
.+.+..+.+++ ..+.||.++|+++++. +.+.+... ....+..| ..++.... +
T Consensus 307 ~~~l~~aa~~e----------------~~s~HPia~Ai~~~~~-~~~~~~~~----~~~~~~~~------g~Gi~~~~-~ 358 (562)
T TIGR01511 307 TELLALAAALE----------------AGSEHPLAKAIVSYAK-EKGITLVE----VSDFKAIP------GIGVEGTV-E 358 (562)
T ss_pred HHHHHHHHHHh----------------ccCCChHHHHHHHHHH-hcCCCcCC----CCCeEEEC------CceEEEEE-C
Confidence 23333222221 1245899999999876 44433211 11111111 22333333 2
Q ss_pred CCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeec
Q 043535 427 DNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLL 506 (881)
Q Consensus 427 ~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i 506 (881)
+.++ ..|+++.+.+... .++ ++.++|.+++.++ .|.+++|.+
T Consensus 359 g~~~---~iG~~~~~~~~~~----------~~~------------~~~~~g~~~~~~~-------------~~~~~~g~~ 400 (562)
T TIGR01511 359 GTKI---QLGNEKLLGENAI----------KID------------GKAEQGSTSVLVA-------------VNGELAGVF 400 (562)
T ss_pred CEEE---EEECHHHHHhCCC----------CCC------------hhhhCCCEEEEEE-------------ECCEEEEEE
Confidence 3333 4599988754211 011 1235677777665 577999999
Q ss_pred cccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHH
Q 043535 507 GIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVK 586 (881)
Q Consensus 507 ~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 586 (881)
.++|++||+++++|++|++.|++++|+|||+..++.++++++|+. ++++..|++|.+.++
T Consensus 401 ~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--------------------~~~~~~p~~K~~~v~ 460 (562)
T TIGR01511 401 ALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--------------------VRAEVLPDDKAALIK 460 (562)
T ss_pred EecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--------------------EEccCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999995 678899999999999
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 043535 587 CLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTIS 666 (881)
Q Consensus 587 ~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 666 (881)
.+++.++.|+|+|||.||++|++.||+||+|+ ++++.+++.||+++.++++..+.++++.||++++++++++.|++.+|
T Consensus 461 ~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n 539 (562)
T TIGR01511 461 ELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYN 539 (562)
T ss_pred HHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 043535 667 VSSVLFNFLAA 677 (881)
Q Consensus 667 ~~~i~~~~~~~ 677 (881)
++.+.+.+.+.
T Consensus 540 ~~~i~la~~~~ 550 (562)
T TIGR01511 540 VIAIPIAAGVL 550 (562)
T ss_pred HHHHHHHHhhh
Confidence 99877666543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-63 Score=610.90 Aligned_cols=461 Identities=26% Similarity=0.327 Sum_probs=383.7
Q ss_pred HHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCceeecc
Q 043535 131 LSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSG 204 (881)
Q Consensus 131 l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aG 204 (881)
++++.+ +.+++|+|||++++|+.++|+|||+|.|++||+|||||++++|+. .+||| |+ .|+.+..++.+|+|
T Consensus 314 ~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~-~vdeS~lTGEs-~pv~k~~gd~V~aG 391 (834)
T PRK10671 314 LEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEA-WLDEAMLTGEP-IPQQKGEGDSVHAG 391 (834)
T ss_pred HHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceE-EEeehhhcCCC-CCEecCCCCEEEec
Confidence 555443 357899999999999999999999999999999999999999976 99998 54 67777799999999
Q ss_pred cEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh---h----------H
Q 043535 205 TKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL---D----------L 271 (881)
Q Consensus 205 t~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~---~----------~ 271 (881)
|.+.+|.+.++|+++|.+|.+|++.+.+++.+..++++++.+++++.+++++.++++++.+++|+ . .
T Consensus 392 t~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a 471 (834)
T PRK10671 392 TVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIA 471 (834)
T ss_pred ceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 99999999999999999999999999999888889999999999999999988888877766553 1 1
Q ss_pred HHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHH
Q 043535 272 NAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQ 351 (881)
Q Consensus 272 ~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~ 351 (881)
..++.++|||+|++++|+++..++.+++++|+++|+++++|+++++|++|||||||||+|+|++.+.......+..+.+.
T Consensus 472 ~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~ 551 (834)
T PRK10671 472 TTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALR 551 (834)
T ss_pred HHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCCCHHHHHH
Confidence 23334559999999999999999999999999999999999999999999999999999999998764321111223333
Q ss_pred HHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEE
Q 043535 352 QGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVH 431 (881)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~ 431 (881)
.+.+++. .+.||+++|+++++. ..... ...+|+... ..++.... ++.
T Consensus 552 ~a~~~e~----------------~s~hp~a~Ai~~~~~-~~~~~-----------~~~~~~~~~-g~Gv~~~~-~g~--- 598 (834)
T PRK10671 552 LAAALEQ----------------GSSHPLARAILDKAG-DMTLP-----------QVNGFRTLR-GLGVSGEA-EGH--- 598 (834)
T ss_pred HHHHHhC----------------CCCCHHHHHHHHHHh-hCCCC-----------CcccceEec-ceEEEEEE-CCE---
Confidence 3333221 145899999998764 22110 011222222 12332222 332
Q ss_pred EEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCC
Q 043535 432 VHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDP 511 (881)
Q Consensus 432 l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~ 511 (881)
.+.+|+++.+.+... + ++.+.+..+++.++|.+++.+++ |..++|++.+.|+
T Consensus 599 ~~~~G~~~~~~~~~~------------~---~~~~~~~~~~~~~~g~~~v~va~-------------~~~~~g~~~l~d~ 650 (834)
T PRK10671 599 ALLLGNQALLNEQQV------------D---TKALEAEITAQASQGATPVLLAV-------------DGKAAALLAIRDP 650 (834)
T ss_pred EEEEeCHHHHHHcCC------------C---hHHHHHHHHHHHhCCCeEEEEEE-------------CCEEEEEEEccCc
Confidence 235699998754211 1 13355566778889999998884 5579999999999
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK 591 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 591 (881)
+||+++++|++|++.|++++|+|||+..++..+++++|+.. ++++..|++|.++++.++.+
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-------------------~~~~~~p~~K~~~i~~l~~~ 711 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-------------------VIAGVLPDGKAEAIKRLQSQ 711 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-------------------EEeCCCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999986 89999999999999999999
Q ss_pred CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 592 GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVL 671 (881)
Q Consensus 592 g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~ 671 (881)
++.|+|+|||.||++|++.||+||+|| ++++.++++||+++.++++.++.+++++||+.+.++++|+.|++.+|++.+.
T Consensus 712 ~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 712 GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIP 790 (834)
T ss_pred CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 8999999999999999999999999999999999999999999999998877
Q ss_pred HHH
Q 043535 672 FNF 674 (881)
Q Consensus 672 ~~~ 674 (881)
+.+
T Consensus 791 ~a~ 793 (834)
T PRK10671 791 IAA 793 (834)
T ss_pred HHH
Confidence 665
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-54 Score=456.28 Aligned_cols=470 Identities=23% Similarity=0.322 Sum_probs=367.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceEEEeC-CEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----Cc
Q 043535 115 VSASSKYMQNKKFEKLLSKVSNSIQVDVVRN-KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DH 189 (881)
Q Consensus 115 i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd-g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~ 189 (881)
.+++.|-+-+.++.. +++.+....++++++ |.++.+++.+|+.||+|.|++||.||+||.+++|.+ .|||| |+
T Consensus 82 aEa~AEGrgKAqAds-Lr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGES 159 (681)
T COG2216 82 AEAVAEGRGKAQADS-LRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGES 159 (681)
T ss_pred HHHHHcccchHHHHH-HHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCC
Confidence 334444444444444 665555567777876 899999999999999999999999999999999998 99998 22
Q ss_pred cccccCCCC---ceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 190 NVEVNSSQN---PFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLL 266 (881)
Q Consensus 190 ~v~~~~~~~---~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~ 266 (881)
-|+-++.| +-+-.||.+++.+.+.++++...+|.+.|+...++.++.++||-+-.+..+..-+.++.++.....+-
T Consensus 160 -aPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p 238 (681)
T COG2216 160 -APVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYP 238 (681)
T ss_pred -cceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 33332233 56899999999999999999999999999999999999999998877776665554443332222211
Q ss_pred --HHh-----h---HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEe
Q 043535 267 --MIL-----D---LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGA 336 (881)
Q Consensus 267 --~~~-----~---~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~ 336 (881)
.+. + ...++...+|-.+.-.++.--..++.|+.+.|++.++..++|..|.+|++..|||||+|-|+-.-.
T Consensus 239 ~a~y~~g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~ 318 (681)
T COG2216 239 FAIYSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQAS 318 (681)
T ss_pred HHHHcCCCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhh
Confidence 111 1 123334448988887777777779999999999999999999999999999999999999987666
Q ss_pred ecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCc
Q 043535 337 ADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRK 416 (881)
Q Consensus 337 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k 416 (881)
+..+...-+..+... +..+++ +. ++ -|.-+.+++.++ +.+.+....... ......||+.+.|
T Consensus 319 ~f~p~~gv~~~~la~-aa~lsS---l~---De---------TpEGrSIV~LA~-~~~~~~~~~~~~-~~~~fvpFtA~TR 380 (681)
T COG2216 319 EFIPVPGVSEEELAD-AAQLAS---LA---DE---------TPEGRSIVELAK-KLGIELREDDLQ-SHAEFVPFTAQTR 380 (681)
T ss_pred heecCCCCCHHHHHH-HHHHhh---hc---cC---------CCCcccHHHHHH-HhccCCCccccc-ccceeeecceecc
Confidence 654433323333332 222322 11 11 144566777776 555443322211 1356789999888
Q ss_pred eEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCccccc
Q 043535 417 QSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELN 496 (881)
Q Consensus 417 ~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~ 496 (881)
++++-... + +-.-|||.+.+.+..++. +. +.++.++..+++-+..|-..++++
T Consensus 381 mSGvd~~~--~---~~irKGA~dai~~~v~~~----~g------~~p~~l~~~~~~vs~~GGTPL~V~------------ 433 (681)
T COG2216 381 MSGVDLPG--G---REIRKGAVDAIRRYVRER----GG------HIPEDLDAAVDEVSRLGGTPLVVV------------ 433 (681)
T ss_pred cccccCCC--C---ceeecccHHHHHHHHHhc----CC------CCCHHHHHHHHHHHhcCCCceEEE------------
Confidence 77775432 2 344799999999876531 11 235677888899999999888887
Q ss_pred ccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc
Q 043535 497 EENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA 576 (881)
Q Consensus 497 e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~ 576 (881)
.|-.++|++.++|-++|+.+|-+.+||+.|||.+|+||||+.||..||++.|++. ..+++
T Consensus 434 -~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd-------------------fiAea 493 (681)
T COG2216 434 -ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-------------------FIAEA 493 (681)
T ss_pred -ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh-------------------hhhcC
Confidence 5778999999999999999999999999999999999999999999999999997 78999
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHH
Q 043535 577 SPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYV 653 (881)
Q Consensus 577 ~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~ 653 (881)
+||+|.++++.-|..|+-|+|+|||.||+|+|.+||||+||. +|++.||+++++|=+|.|...+.+.++.|+...-
T Consensus 494 tPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 494 TPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred ChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999997653
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=253.10 Aligned_cols=201 Identities=32% Similarity=0.495 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc--CCc-eEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEe-ccceeeec
Q 043535 111 IYISVSASSKYMQNKKFEKLLSKVSN--SIQ-VDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLD-GHSLQIQE 186 (881)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~-v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~-g~~l~vde 186 (881)
++++++.+.+++++++.++..+++.+ ..+ ++|+|||++++++++||+|||+|.+++||++||||++++ |+. .+||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~-~vd~ 82 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSA-YVDE 82 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEE-EEEC
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccc-cccc
Confidence 33444555555565555554555433 234 899999999999999999999999999999999999999 655 9998
Q ss_pred C----CccccccCC-----CCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHH
Q 043535 187 S----DHNVEVNSS-----QNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIG 257 (881)
Q Consensus 187 s----~~~v~~~~~-----~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~ 257 (881)
+ ++ .++.+. .++.+|+||.+.+|++.++|++||.+|..|++.+...+++.+++++++.++++..++.++.
T Consensus 83 s~ltGes-~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 83 SALTGES-EPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp HHHHSBS-SEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred ccccccc-cccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 7 33 555555 8999999999999999999999999999999999998888888999999999999999888
Q ss_pred HHHHHHHHHHHhh-------------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhh
Q 043535 258 LAITFSGLLMILD-------------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACET 313 (881)
Q Consensus 258 l~~~~~~~~~~~~-------------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~ 313 (881)
++++++++++++- ...++..+||++||+++++++..+++++.++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 162 LAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 8888777765431 2233355599999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-22 Score=207.02 Aligned_cols=97 Identities=48% Similarity=0.796 Sum_probs=91.8
Q ss_pred CceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc--
Q 043535 499 NLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA-- 576 (881)
Q Consensus 499 ~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~-- 576 (881)
+..++|.+.+.|++|++++++|+.|+++|++++|+|||+..++.++++++||.. ..++++.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-----------------~~v~a~~~~ 177 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-----------------SIVFARVIG 177 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-----------------EEEEESHET
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-----------------ccccccccc
Confidence 789999999999999999999999999999999999999999999999999954 3489999
Q ss_pred CHHHH--HHHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 043535 577 SPDDK--LAMVKCLKLKGHVVAVTGNGIKDAPALEEAN 612 (881)
Q Consensus 577 ~p~~K--~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~ 612 (881)
+|++| .++++.++..++.|+|+|||.||++|+++||
T Consensus 178 kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 178 KPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp TTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-21 Score=195.80 Aligned_cols=171 Identities=37% Similarity=0.587 Sum_probs=142.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCc
Q 043535 682 KNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE 761 (881)
Q Consensus 682 ~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (881)
|.|+++.|+||+|+++|.+|+++++.|+|++++|++||+++++++++++++..++.+|+++++..+..++.....+|.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999988888776665566654
Q ss_pred c-------cchhHHHHHHHHHHHHhhHhhhcccccccc--ccCcchHHHHHHHHHHHHHHHHHH--HHhhhhhcCCCCCh
Q 043535 762 N-------VKDTMIFNTFVLCQVFNEFNARKLEKKNVF--KGIHKNKSFLGIIGITIVLQVVMV--EILKKFADTEGLNW 830 (881)
Q Consensus 762 ~-------~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~--~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~ 830 (881)
. .++|++|.+++++|+++.+++|+.+ .+.+ +++++|++++.+++++++++++++ |+++++|++.++++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~-~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR-RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS-STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc-ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 4 3899999999999999999999854 3444 488899999999999888887775 45899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc
Q 043535 831 IQWGSCIGIAAISWPIGWFVKCI 853 (881)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~l~k~~ 853 (881)
.+|+.+++.+++.+++.|++|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-19 Score=192.04 Aligned_cols=267 Identities=14% Similarity=0.249 Sum_probs=204.9
Q ss_pred CCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC----------------Cc-------
Q 043535 436 GAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV----------------PE------- 492 (881)
Q Consensus 436 Ga~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~----------------~~------- 492 (881)
|-.+...+.|+.+|+ +.+..|++...+....+.+......|+ +++||||+... .+
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 556778889999987 567789999999999888888888885 89999996532 00
Q ss_pred -------------c-------------------cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHH
Q 043535 493 -------------E-------------------ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFT 540 (881)
Q Consensus 493 -------------~-------------------~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~ 540 (881)
+ +..-++.+|.|++....+.+++....|+.|-++.|+.+..|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 0 01124678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCch--------------------------------------------hhhcCCHHH--------------
Q 043535 541 AKAIATQCGILKP--------------------------------------------EFRNYTEEE-------------- 562 (881)
Q Consensus 541 a~~ia~~~gi~~~--------------------------------------------~~~~~~~~~-------------- 562 (881)
.+-.|+++|+... +...+..++
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 9999999999764 000000000
Q ss_pred ------------HHH-------HHh-------hheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHH--HHHhCCcc
Q 043535 563 ------------KME-------KVE-------KIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAP--ALEEANVG 614 (881)
Q Consensus 563 ------------~~~-------~~~-------~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~--~l~~A~vg 614 (881)
+.. .+. -+..|.+++|+.-.++++.+|++|++++.+|...|--. .+-+||++
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 000 000 11279999999999999999999999999999988433 45789999
Q ss_pred EeeCCCCcHH------------------------------HHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Q 043535 615 LSMGIQGTAV------------------------------AKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLT 664 (881)
Q Consensus 615 Iam~~~~~~~------------------------------a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 664 (881)
||+..-.... ..-++|+.......-.+..+|+-+|.....+|+.+.|.++
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 9886321110 1123445444445566778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHH
Q 043535 665 ISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALA 704 (881)
Q Consensus 665 ~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~ 704 (881)
..+...+.+++..++..|..++..+++|.+.+-..+..+.
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~ 1135 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIG 1135 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHH
Confidence 9999999999999999998899999999998865444444
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=3e-14 Score=126.24 Aligned_cols=125 Identities=22% Similarity=0.267 Sum_probs=108.4
Q ss_pred ceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHH
Q 043535 500 LILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPD 579 (881)
Q Consensus 500 l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 579 (881)
....+.++---++-++++++|++|++. +++++.|||...+....|+-.|++.. .+++...|+
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-----------------rv~a~a~~e 80 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-----------------RVFAGADPE 80 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-----------------eeecccCHH
Confidence 356778888889999999999999999 99999999999999999999999862 389999999
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCC--CCcHHHHhhcCeeeccCCchHHHHH
Q 043535 580 DKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGI--QGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~--~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
.|.++++.|++.++.|.|+|||.||.+||++||+||+.-+ +..+.+..+||+++.+ ...++++
T Consensus 81 ~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 81 MKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred HHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 9999999999999999999999999999999999988643 3445667899999874 4444443
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.4e-13 Score=116.87 Aligned_cols=87 Identities=30% Similarity=0.451 Sum_probs=69.6
Q ss_pred hccccceeeccCCCCcceeecCChHHHHHHhcccccC--CCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEE
Q 043535 356 LNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGM--SMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVH 433 (881)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~--~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~ 433 (881)
+|+.+.+...+... .....|+|+|.||+.++. .. +.+....+..+++++.+||+|+||+|+++++ +++.+.+|
T Consensus 2 LCn~a~~~~~~~~~--~~~~~G~ptE~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~~~~~~~~ 76 (91)
T PF13246_consen 2 LCNDAEIEYDDESK--TEEIIGDPTEKALLRFAK-KLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--NDGKYILY 76 (91)
T ss_pred CccccEeecCCCCc--cccccCCcCHHHHHHHHH-HcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--CCCEEEEE
Confidence 56666654322211 223899999999999998 77 5567788999999999999999999999998 33357789
Q ss_pred EeCCHHHHHHhccc
Q 043535 434 WKGAAEIILAMCSS 447 (881)
Q Consensus 434 ~KGa~e~i~~~c~~ 447 (881)
+|||||.|+++|++
T Consensus 77 ~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 77 VKGAPEVILDRCTH 90 (91)
T ss_pred cCCChHHHHHhcCC
Confidence 99999999999985
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.3e-12 Score=105.22 Aligned_cols=68 Identities=25% Similarity=0.429 Sum_probs=64.4
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHH
Q 043535 29 QFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILS 98 (881)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~ 98 (881)
+..+++++++.|+||..+|||++| +.+|+++||+|+++.++.+++|+.++++|.+|+++++++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 456899999999999999999988 99999999999999999999999999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.6e-11 Score=128.54 Aligned_cols=137 Identities=20% Similarity=0.205 Sum_probs=103.1
Q ss_pred cCC-CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch----------hh--h------cC-----------
Q 043535 509 KDP-CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------EF--R------NY----------- 558 (881)
Q Consensus 509 ~D~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------~~--~------~~----------- 558 (881)
.|. +.+.+.++|++++++|++++++|||+...+..+++.+|+..+ .. . .+
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 444 788999999999999999999999999999999999998753 00 0 00
Q ss_pred ----------------------------CHHHHHHHHhhh----ee-----eeccCHH--HHHHHHHHHhhc----CCEE
Q 043535 559 ----------------------------TEEEKMEKVEKI----YV-----MARASPD--DKLAMVKCLKLK----GHVV 595 (881)
Q Consensus 559 ----------------------------~~~~~~~~~~~~----~v-----~~~~~p~--~K~~~v~~l~~~----g~~v 595 (881)
..++..+.+.+. .+ +....|. .|...++.+.++ ...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~ 176 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEV 176 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHE
Confidence 001111111111 00 1122232 477778777665 3468
Q ss_pred EEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 596 AVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 596 ~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
+++||+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++++
T Consensus 177 i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 177 AAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred EEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999999 999999999999999999999998875
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-11 Score=132.83 Aligned_cols=67 Identities=22% Similarity=0.229 Sum_probs=58.6
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|+..++.+.++ .+.|+++|||.||.+||+.|++|+||+ |+.+.+|+.||+|+.+++.+++.++|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 466777776654 246899999999999999999999999 9999999999999999999999988753
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-11 Score=132.63 Aligned_cols=135 Identities=12% Similarity=0.116 Sum_probs=100.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------------h-h---
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------------------------------E-F--- 555 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------------------~-~--- 555 (881)
.+.+.+.++|++++++|++++++|||+...+..+.+++|+..+ + .
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5899999999999999999999999999999999999998643 0 0
Q ss_pred --------------hcCCH-----------------------------------HH---HHHHHhh-----hee------
Q 043535 556 --------------RNYTE-----------------------------------EE---KMEKVEK-----IYV------ 572 (881)
Q Consensus 556 --------------~~~~~-----------------------------------~~---~~~~~~~-----~~v------ 572 (881)
....+ +. +.+.+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00000 00 0000100 000
Q ss_pred eeccCHH--HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCe--eeccCCchHHHHH
Q 043535 573 MARASPD--DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI--IILDDNFATAVTL 644 (881)
Q Consensus 573 ~~~~~p~--~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~--vl~~~~~~~i~~~ 644 (881)
+...+|. .|+..++.+.++ | ..|+++|||.||.+||+.|+.||||+ |+.+.+|+.||+ ++.+++.+++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 1122232 477778777665 2 46899999999999999999999999 999999999997 7778899999987
Q ss_pred HH
Q 043535 645 LN 646 (881)
Q Consensus 645 i~ 646 (881)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 75
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-11 Score=131.16 Aligned_cols=135 Identities=18% Similarity=0.181 Sum_probs=99.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------------h-hh--
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------------------------------E-FR-- 556 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------------------~-~~-- 556 (881)
.+.+.+.++|++++++|++++++|||+...+..+.+++|+..+ + ..
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 4889999999999999999999999999999999999998643 0 00
Q ss_pred ----------------cCCH------------------------------------HHHH---HHHhh-----hee----
Q 043535 557 ----------------NYTE------------------------------------EEKM---EKVEK-----IYV---- 572 (881)
Q Consensus 557 ----------------~~~~------------------------------------~~~~---~~~~~-----~~v---- 572 (881)
...+ ++.. +.+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 178 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFST 178 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeC
Confidence 0000 0000 00000 000
Q ss_pred --eeccCH--HHHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcC--eeeccCCchHHH
Q 043535 573 --MARASP--DDKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSD--IIILDDNFATAV 642 (881)
Q Consensus 573 --~~~~~p--~~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad--~vl~~~~~~~i~ 642 (881)
+....| ..|+..++.+.++ | +.|+++|||.||.+||+.|+.|+||+ |+.+.+|+.|| +|+.+++.+++.
T Consensus 179 ~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa 257 (266)
T PRK10976 179 LTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVP 257 (266)
T ss_pred CceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHH
Confidence 111122 2467777776654 2 46899999999999999999999999 99999999988 788899999999
Q ss_pred HHHH
Q 043535 643 TLLN 646 (881)
Q Consensus 643 ~~i~ 646 (881)
++|+
T Consensus 258 ~~l~ 261 (266)
T PRK10976 258 HYLR 261 (266)
T ss_pred HHHH
Confidence 8875
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2e-11 Score=130.67 Aligned_cols=143 Identities=23% Similarity=0.268 Sum_probs=108.7
Q ss_pred eeccccCC-CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-----------------------------
Q 043535 504 GLLGIKDP-CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------------------------- 553 (881)
Q Consensus 504 G~i~~~D~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------------------------- 553 (881)
|.+.-.|. +.+.+.++|+++++.|++++++|||+...+..+.+++|+..+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999999864
Q ss_pred -----h-------------------hh------------------------------cCCHH---HHHHHHhh-----he
Q 043535 554 -----E-------------------FR------------------------------NYTEE---EKMEKVEK-----IY 571 (881)
Q Consensus 554 -----~-------------------~~------------------------------~~~~~---~~~~~~~~-----~~ 571 (881)
+ .. ....+ +..+.+.+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 00 00001 11111111 11
Q ss_pred ee-------eccCH--HHHHHHHHHHhhc-CC---EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCc
Q 043535 572 VM-------ARASP--DDKLAMVKCLKLK-GH---VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNF 638 (881)
Q Consensus 572 v~-------~~~~p--~~K~~~v~~l~~~-g~---~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~ 638 (881)
.+ ....| .+|+..++.+.++ |- .|+++||+.||.+||+.|+.||||+ |+.+.+|+.||+++.+++.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDE 250 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccc
Confidence 11 22233 3688888888874 43 5999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHH
Q 043535 639 ATAVTLLNW 647 (881)
Q Consensus 639 ~~i~~~i~~ 647 (881)
+++.+++++
T Consensus 251 ~Gv~~~l~~ 259 (264)
T COG0561 251 DGVAEALEK 259 (264)
T ss_pred hHHHHHHHH
Confidence 999998875
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.3e-11 Score=125.93 Aligned_cols=133 Identities=19% Similarity=0.203 Sum_probs=100.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------------h--hhcCC---------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--------------E--FRNYT--------------- 559 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------~--~~~~~--------------- 559 (881)
++.+.+.++|++|+++|++++++|||+...+..+++.+++..+ . .....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998744 0 00000
Q ss_pred --------------------HHHHHHHHhhh--ee-----eeccC--HHHHHHHHHHHhhc----CCEEEEEcCCccCHH
Q 043535 560 --------------------EEEKMEKVEKI--YV-----MARAS--PDDKLAMVKCLKLK----GHVVAVTGNGIKDAP 606 (881)
Q Consensus 560 --------------------~~~~~~~~~~~--~v-----~~~~~--p~~K~~~v~~l~~~----g~~v~~iGDg~ND~~ 606 (881)
.+.+.+.+.+. .+ +..++ ...|+..++.+.++ ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00111111111 01 11222 24788888888765 235899999999999
Q ss_pred HHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHH
Q 043535 607 ALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 607 ~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999998888888765
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.8e-11 Score=123.33 Aligned_cols=135 Identities=21% Similarity=0.247 Sum_probs=100.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------------h------hhcCCH------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------E------FRNYTE------------ 560 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------~------~~~~~~------------ 560 (881)
.+.+.+.++|++++++|++++++|||+...+..+++++|+..+ . ...+.+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4788999999999999999999999999999999999996543 0 000000
Q ss_pred ------------------------HHHHHHHhhhe----e-----eeccCH--HHHHHHHHHHhhc----CCEEEEEcCC
Q 043535 561 ------------------------EEKMEKVEKIY----V-----MARASP--DDKLAMVKCLKLK----GHVVAVTGNG 601 (881)
Q Consensus 561 ------------------------~~~~~~~~~~~----v-----~~~~~p--~~K~~~v~~l~~~----g~~v~~iGDg 601 (881)
+.......+.. + +....| ..|...++.+.++ .+.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 01111111110 0 112222 3688888887765 3568999999
Q ss_pred ccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH----HHHHHH
Q 043535 602 IKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT----AVTLLN 646 (881)
Q Consensus 602 ~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~ 646 (881)
.||.+|++.|++|+||+ |+.+.+|+.||+|+.+++..+ +.+.++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999999888888 776654
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.9e-11 Score=135.75 Aligned_cols=67 Identities=22% Similarity=0.311 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|+..++.+.++ | +.|+++|||.||.+||+.|++||||+ |+.+.+|+.||+|+.+++.+++.++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 355556666554 2 36899999999999999999999999 9999999999999999999999988863
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.5e-11 Score=124.11 Aligned_cols=136 Identities=21% Similarity=0.243 Sum_probs=102.8
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-----------------------------------
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------------------------------- 553 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------------------------------- 553 (881)
...+.+.+.+++++++++|++++++|||++..+..+.+++++..+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345789999999999999999999999999999999999998743
Q ss_pred ---------------hhhc------------------------------------CCHHH-------HHHHHhhhee---
Q 043535 554 ---------------EFRN------------------------------------YTEEE-------KMEKVEKIYV--- 572 (881)
Q Consensus 554 ---------------~~~~------------------------------------~~~~~-------~~~~~~~~~v--- 572 (881)
.... ...+. +.+.......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000 00111 1111111111
Q ss_pred ----eeccCH--HHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHH
Q 043535 573 ----MARASP--DDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 573 ----~~~~~p--~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
+..++| ..|+..++.+.++ .+.++++||+.||.+||+.||.|+||+ |+.+.+++.||+++...+..++.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 122233 4699998888864 357899999999999999999999999 99999999999999988889988
Q ss_pred HHH
Q 043535 643 TLL 645 (881)
Q Consensus 643 ~~i 645 (881)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 764
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-10 Score=123.11 Aligned_cols=66 Identities=23% Similarity=0.353 Sum_probs=56.6
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.|...++.+.++ | +.++++||+.||.+|++.|++|+||+ |+.+.+|..||+++.+++.+++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666655544 2 46899999999999999999999999 899999999999999999999998875
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.2e-10 Score=123.14 Aligned_cols=131 Identities=18% Similarity=0.258 Sum_probs=99.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-ccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-RASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+... +.+.-+ .....+. ..+.. -+..+.|.+.++.+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~-~an~le-i~dg~lt-g~v~g~iv~~k~K~~~L~~la 257 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAA-VANELE-IMDGKLT-GNVLGDIVDAQYKADTLTRLA 257 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeE-EEeEEE-EECCEEE-eEecCccCCcccHHHHHHHHH
Confidence 5799999999999999999999999998889999999998641 000000 0000000 00000 123467888888887
Q ss_pred hc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 590 LK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 590 ~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
++ .+.++++|||.||.+|++.||+|||| |+.+.+++.||+++..+++++++.++.
T Consensus 258 ~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 258 QEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 65 35799999999999999999999999 789999999999999999999986654
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.6e-10 Score=94.44 Aligned_cols=62 Identities=31% Similarity=0.470 Sum_probs=57.8
Q ss_pred HhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 043535 39 ALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG 102 (881)
Q Consensus 39 ~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~ 102 (881)
.|++|++.|||++| +++|+++||+|+++.++.+++|..++++|.+|+.++++++++++++.+
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 57889889999988 999999999999999988999999999999999999999999998764
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.4e-10 Score=113.14 Aligned_cols=130 Identities=12% Similarity=0.043 Sum_probs=99.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-CCHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-YTEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.|+.+++.| +++++||.....+..+++++|+... +.+ +.-+. ...+... . ...++.|...++.++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~-~an~l~~~~-~g~~tG~-~--~~~~~~K~~~l~~l~ 141 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDD-SDRVVGY-Q--LRQKDPKRQSVIAFK 141 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh-hceeeEEec-CCeeECe-e--ecCcchHHHHHHHHH
Confidence 58999999999999985 9999999999999999999999741 110 00000 0000000 0 034678999999998
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHh
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWG 648 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 648 (881)
+.+..+.++|||.||.+|++.||+||++. +.+..+++||-.-.-.+.+.+..++.++
T Consensus 142 ~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 142 SLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 88888999999999999999999999995 6777777777666656788888777664
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-09 Score=107.11 Aligned_cols=104 Identities=15% Similarity=0.215 Sum_probs=84.1
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc--CHHHHHHHHHHHhhcCCEE
Q 043535 518 KAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA--SPDDKLAMVKCLKLKGHVV 595 (881)
Q Consensus 518 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~~v~~l~~~g~~v 595 (881)
.+|+.|+++|+++.++|+.+...+....+.+|+.. .|... .|+-...+++.+.-..+.+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-------------------~f~~~kpkp~~~~~~~~~l~~~~~ev 101 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-------------------FHEGIKKKTEPYAQMLEEMNISDAEV 101 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-------------------EEecCCCCHHHHHHHHHHcCcCHHHE
Confidence 47899999999999999999999999999999985 33333 2333334444443334679
Q ss_pred EEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHH
Q 043535 596 AVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATA 641 (881)
Q Consensus 596 ~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i 641 (881)
+++||+.||.+|++.|++++||+ |+.+.++..|++++..++-.+.
T Consensus 102 ~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 102 CYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred EEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 99999999999999999999999 9999999999999876665544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.6e-09 Score=115.42 Aligned_cols=133 Identities=22% Similarity=0.260 Sum_probs=99.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------------------------------- 553 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------- 553 (881)
++.+++.++|++++++|++++++|||+...+..+.+++|+..+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5888999999999999999999999999999999999998743
Q ss_pred ------------hhhcC-------------------------------------CHH---HHHHHHhh------hee---
Q 043535 554 ------------EFRNY-------------------------------------TEE---EKMEKVEK------IYV--- 572 (881)
Q Consensus 554 ------------~~~~~-------------------------------------~~~---~~~~~~~~------~~v--- 572 (881)
..... +++ ++.+.+.+ ..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 00000 000 01111110 101
Q ss_pred ---eeccCH--HHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHH
Q 043535 573 ---MARASP--DDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 573 ---~~~~~p--~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~ 643 (881)
+....| ..|+..++.+.++ .+.++++||+.||++|++.|+.|+||+ |+.+.+|+.||+++.+++.+++.+
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhh
Confidence 112222 2588888887765 246899999999999999999999999 999999999999999999888876
Q ss_pred H
Q 043535 644 L 644 (881)
Q Consensus 644 ~ 644 (881)
+
T Consensus 255 ~ 255 (256)
T TIGR00099 255 A 255 (256)
T ss_pred h
Confidence 4
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.3e-09 Score=110.74 Aligned_cols=135 Identities=16% Similarity=0.108 Sum_probs=95.9
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------h--h--------hcCCHHHHHHHHh
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------------E--F--------RNYTEEEKMEKVE 568 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------~--~--------~~~~~~~~~~~~~ 568 (881)
..+.+.++|++++++|++++++|||+...+..+.+++|+..+ . . ..++.+...+.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 455799999999999999999999999999999999998643 0 0 0012111111000
Q ss_pred -----------------------------------------------------------h--hee-----eeccCH--HH
Q 043535 569 -----------------------------------------------------------K--IYV-----MARASP--DD 580 (881)
Q Consensus 569 -----------------------------------------------------------~--~~v-----~~~~~p--~~ 580 (881)
+ ..+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0 000 000111 24
Q ss_pred HHHHHHHHhhc------CCEEEEEcCCccCHHHHHhCCccEeeCCCCc---HHHHhh--c-CeeeccCCchHHHHHHHH
Q 043535 581 KLAMVKCLKLK------GHVVAVTGNGIKDAPALEEANVGLSMGIQGT---AVAKES--S-DIIILDDNFATAVTLLNW 647 (881)
Q Consensus 581 K~~~v~~l~~~------g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~--a-d~vl~~~~~~~i~~~i~~ 647 (881)
|+..++.+.++ .+.++++||+.||.+|++.||+||||+ |+. +.+|+. | ++|+.+++.+++.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 66666666544 456999999999999999999999999 887 478886 4 599999999999988864
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.1e-09 Score=102.60 Aligned_cols=103 Identities=16% Similarity=0.207 Sum_probs=84.2
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CCE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GHV 594 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~~ 594 (881)
+|++|+++|+++.++||++...+..+.+++|+.. .+... ..|.+.++.+.++ .+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-------------------~~~~~--~~k~~~~~~~~~~~~~~~~~ 94 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-------------------LYQGQ--SNKLIAFSDILEKLALAPEN 94 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-------------------EEecc--cchHHHHHHHHHHcCCCHHH
Confidence 8999999999999999999999999999999975 33322 3455555555432 457
Q ss_pred EEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH-HHH
Q 043535 595 VAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT-AVT 643 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~-i~~ 643 (881)
++++||+.||.+|++.|+++++|. ++.+..+..||+++.++.-.+ +.+
T Consensus 95 ~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~ 143 (154)
T TIGR01670 95 VAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVRE 143 (154)
T ss_pred EEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHH
Confidence 999999999999999999999998 888999999999998765444 443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.6e-09 Score=111.49 Aligned_cols=136 Identities=10% Similarity=-0.004 Sum_probs=95.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc-h----------hh-h------------cCCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK-P----------EF-R------------NYTEEEKMEK 566 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~----------~~-~------------~~~~~~~~~~ 566 (881)
.+.+.+.++|++|+++|++++++|||+...+..+++++|+.. + .. . .++.+...+.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 355789999999999999999999999999999999999852 2 00 0 0111111000
Q ss_pred H-------------------------------------------------------------h--hhee-----eeccCH
Q 043535 567 V-------------------------------------------------------------E--KIYV-----MARASP 578 (881)
Q Consensus 567 ~-------------------------------------------------------------~--~~~v-----~~~~~p 578 (881)
+ . .+.+ +....|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 0 0 0000 011122
Q ss_pred --HHHHHHHHHHhhc-------CCEEEEEcCCccCHHHHHhCCccEeeCCCCc-HH-----HHhhcCeeeccCCchHHHH
Q 043535 579 --DDKLAMVKCLKLK-------GHVVAVTGNGIKDAPALEEANVGLSMGIQGT-AV-----AKESSDIIILDDNFATAVT 643 (881)
Q Consensus 579 --~~K~~~v~~l~~~-------g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~-~~-----a~~~ad~vl~~~~~~~i~~ 643 (881)
..|+..++.+.++ ...|+++|||.||.+||+.|++||||+ ++. +. .+..+|+++...+-+++.+
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~ 262 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWRE 262 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHH
Confidence 2466666666553 357999999999999999999999999 444 32 4457999999999999998
Q ss_pred HHHH
Q 043535 644 LLNW 647 (881)
Q Consensus 644 ~i~~ 647 (881)
++++
T Consensus 263 ~l~~ 266 (271)
T PRK03669 263 GLDH 266 (271)
T ss_pred HHHH
Confidence 8764
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-08 Score=106.19 Aligned_cols=128 Identities=20% Similarity=0.279 Sum_probs=93.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-CCHHHHHHHHhhheeeec-cCHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-YTEEEKMEKVEKIYVMAR-ASPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~v~~~-~~p~~K~~~v~~l 588 (881)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+... +.. ...+ ...+ ...+... ..+..|..+++.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~--~~~~-~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE--DGKL-TGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE--CCEE-EEEecCcccCCcccHHHHHHH
Confidence 5899999999999999999999999999999999999998751 000 0000 0000 0000001 1123477777766
Q ss_pred hhcC----CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHH
Q 043535 589 KLKG----HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 589 ~~~g----~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
.++. +.+.++||+.||++|.+.||++++++ +.+.++++||+++.++++..+..+
T Consensus 161 ~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 161 LRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 5542 35889999999999999999999985 578888999999999998877654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.3e-09 Score=106.93 Aligned_cols=122 Identities=20% Similarity=0.260 Sum_probs=88.5
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++..--..+..++ ..+....+--.+..+.|.+.++.+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d--G~ltG~v~g~~~~~~~K~~~l~~~~ 153 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD--GKLTGRVVGPICDGEGKAKALRELA 153 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC--CEEeceeeeeecCcchHHHHHHHHH
Confidence 67899999999999999999999999999999999999999863000000000 0011111122344578888886666
Q ss_pred hc-CC---EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeecc
Q 043535 590 LK-GH---VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILD 635 (881)
Q Consensus 590 ~~-g~---~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~ 635 (881)
+. |. .+.++|||.||.|||+.||.++++. +.+..+..|+.....
T Consensus 154 ~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~~ 201 (212)
T COG0560 154 AELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIWP 201 (212)
T ss_pred HHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcCh
Confidence 54 44 5889999999999999999999995 566666666665543
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.6e-08 Score=105.99 Aligned_cols=136 Identities=17% Similarity=0.124 Sum_probs=96.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch----------hhh---------------------cC
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------EFR---------------------NY 558 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------~~~---------------------~~ 558 (881)
+.+.+++.++|++|+++|++++++|||....+..+++++|+..+ ... .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 45678899999999999999999999999999999999998643 000 01
Q ss_pred CHHHHHHHH---------------------------------h---h--he-eee-ccCH--------------------
Q 043535 559 TEEEKMEKV---------------------------------E---K--IY-VMA-RASP-------------------- 578 (881)
Q Consensus 559 ~~~~~~~~~---------------------------------~---~--~~-v~~-~~~p-------------------- 578 (881)
+.+...+.+ . . .. ++. .-++
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRG 179 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEEC
Confidence 111110000 0 0 00 000 0011
Q ss_pred ---------HHHHHHHHHHhhc----C-CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHH----hhc-Ceee--ccCC
Q 043535 579 ---------DDKLAMVKCLKLK----G-HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAK----ESS-DIII--LDDN 637 (881)
Q Consensus 579 ---------~~K~~~v~~l~~~----g-~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~----~~a-d~vl--~~~~ 637 (881)
..|...++.+.++ . ..|+++||+.||.+|++.|++|+||+ |+.+.+| .+| +.++ ..++
T Consensus 180 ~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 180 GRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCC
Confidence 1566666666543 4 88999999999999999999999999 9999999 666 6777 5677
Q ss_pred chHHHHHHH
Q 043535 638 FATAVTLLN 646 (881)
Q Consensus 638 ~~~i~~~i~ 646 (881)
-+++.++++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 889988775
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.2e-08 Score=99.35 Aligned_cols=98 Identities=18% Similarity=0.246 Sum_probs=81.1
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CC
Q 043535 518 KAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GH 593 (881)
Q Consensus 518 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~ 593 (881)
.+|+.|+++|+++.++||++...+..+++++|+.. +|. ..+.|...++.+.+. ..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-------------------~f~--g~~~k~~~l~~~~~~~gl~~~ 113 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-------------------LYQ--GQSNKLIAFSDLLEKLAIAPE 113 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-------------------eec--CCCcHHHHHHHHHHHhCCCHH
Confidence 68999999999999999999999999999999875 343 224466665555433 35
Q ss_pred EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCC
Q 043535 594 VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDN 637 (881)
Q Consensus 594 ~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~ 637 (881)
.++|+||+.||.+|++.|+++++++ ++.+..+..||+++..+.
T Consensus 114 ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 114 QVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCC
Confidence 7999999999999999999999987 788888999999997544
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.2e-08 Score=91.70 Aligned_cols=113 Identities=19% Similarity=0.262 Sum_probs=91.7
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CCE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GHV 594 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~~ 594 (881)
.|+.+++.|+++.++|||+...+..-|+++|+.. +|- --++|....+.+.++ -+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-------------------~~q--G~~dK~~a~~~L~~~~~l~~e~ 101 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-------------------LYQ--GISDKLAAFEELLKKLNLDPEE 101 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-------------------eee--chHhHHHHHHHHHHHhCCCHHH
Confidence 5899999999999999999999999999999986 443 346777777666654 357
Q ss_pred EEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCch----HHHHHHHHhHHHHH
Q 043535 595 VAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFA----TAVTLLNWGRCVYV 653 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~----~i~~~i~~gR~~~~ 653 (881)
|+++||..||.|+|+..++++|+. ++.+..++.||+|+....-. .+.++|..++..+.
T Consensus 102 ~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 102 VAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred hhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 999999999999999999999999 99999999999999865433 33445555554443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.1e-07 Score=99.90 Aligned_cols=67 Identities=15% Similarity=0.199 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcC----eeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSD----IIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad----~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ | ..++++||+.||.+|++.+++||+|+ |+.+.+|+.|| +++.+++-.++.++|.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 577778777664 2 25889999999999999999999999 99999999999 88888888999988864
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.3e-07 Score=98.30 Aligned_cols=138 Identities=16% Similarity=0.157 Sum_probs=99.7
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh----------------------------------
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE---------------------------------- 554 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~---------------------------------- 554 (881)
..+..|...+++++++++|+.++++|||+...+..+.+++++..++
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3457799999999999999999999999999999999998876540
Q ss_pred -------hhcC-----------------CHHH----H---HHHHhh----hee-ee-----ccCH--HHHHHHHHHHhhc
Q 043535 555 -------FRNY-----------------TEEE----K---MEKVEK----IYV-MA-----RASP--DDKLAMVKCLKLK 591 (881)
Q Consensus 555 -------~~~~-----------------~~~~----~---~~~~~~----~~v-~~-----~~~p--~~K~~~v~~l~~~ 591 (881)
+..+ ..+. . .+.+.+ +.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 0000 1 111111 111 11 2233 3688888888764
Q ss_pred ----CCEEEEEcCCccCHHHHHh-CCccEeeCCCCcHHHHhhcC-------eeeccCCchHHHHHHHH
Q 043535 592 ----GHVVAVTGNGIKDAPALEE-ANVGLSMGIQGTAVAKESSD-------IIILDDNFATAVTLLNW 647 (881)
Q Consensus 592 ----g~~v~~iGDg~ND~~~l~~-A~vgIam~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~~ 647 (881)
...|+++||+.||.+|++. ++.|++|+ |+.+.+|+.++ ++.....-+++.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 3578999999999999998 67999999 99999887654 77777778888888764
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=5e-07 Score=92.69 Aligned_cols=126 Identities=20% Similarity=0.219 Sum_probs=89.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee--ccCHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA--RASPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~--~~~p~~K~~~v~~l 588 (881)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+... +...-. ...+..+.. ...|+.|...++.+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~-f~~~~~-----~~~~~~i~~~~~~~p~~k~~~l~~~ 140 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL-FCHSLE-----VDEDGMITGYDLRQPDGKRQAVKAL 140 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh-hcceEE-----ECCCCeEECccccccchHHHHHHHH
Confidence 4689999999999999 99999999999999999999998641 100000 000000111 12467888999999
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCe-eeccCCchHHHHHHH
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI-IILDDNFATAVTLLN 646 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~-vl~~~~~~~i~~~i~ 646 (881)
+..+..++|+|||.||.+|.+.|++|+..+ ...+.....+++ ++. ++..+...+.
T Consensus 141 ~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l~ 196 (205)
T PRK13582 141 KSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAID 196 (205)
T ss_pred HHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHHH
Confidence 888899999999999999999999999886 433334445565 333 4555554443
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.7e-05 Score=88.20 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=70.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
+++|++.+.+++++++|++++++|+.+...+..+++.+|+.+.-+.. + -..+..|+.|.+.++....
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigs-d------------~~~~~kg~~K~~~l~~~l~ 138 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGVFAS-D------------GTTNLKGAAKAAALVEAFG 138 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeC-C------------CccccCCchHHHHHHHHhC
Confidence 47899999999999999999999999999999999999973210000 0 0113455667665543222
Q ss_pred cCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 591 KGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
. +.+.++||+.||.+|++.|+-.++++
T Consensus 139 ~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 139 E-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred c-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 2 22567899999999999999999997
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.7e-07 Score=88.45 Aligned_cols=107 Identities=21% Similarity=0.284 Sum_probs=77.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh-cCCHHHHHHHHhhheee----eccCHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR-NYTEEEKMEKVEKIYVM----ARASPDDKLAMV 585 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~~~~~~~v~----~~~~p~~K~~~v 585 (881)
.+.|++++.++.|++.|.+|+++||.-..-+..+|.++||+..+.- +...-. ...+..-| .-+....|.+++
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd---~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFD---KDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeec---cCCcccccccCCccccCCccHHHH
Confidence 4689999999999999999999999999999999999999863100 000000 00000001 111234699999
Q ss_pred HHHhhc--CCEEEEEcCCccCHHHHHhCCccEeeCCC
Q 043535 586 KCLKLK--GHVVAVTGNGIKDAPALEEANVGLSMGIQ 620 (881)
Q Consensus 586 ~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIam~~~ 620 (881)
+.+++. -..++|||||+||.+|+..|+.=|+.+++
T Consensus 165 ~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~ 201 (227)
T KOG1615|consen 165 ALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGN 201 (227)
T ss_pred HHHHhCCChheeEEecCCccccccCCchhhhhccCCc
Confidence 999885 35789999999999999998887877643
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.7e-07 Score=91.32 Aligned_cols=116 Identities=20% Similarity=0.200 Sum_probs=79.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
+++|++.+.++.|+++|+++.++|+.....+..+++.+|+... +... ..++ .... +-..+....|..|.+.++.+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~-~g~~-~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDE-KGFI-QPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcC-CCeE-ecceeeEEccccHHHHHHHHH
Confidence 5899999999999999999999999999999999999998641 0000 0000 0000 000111123456777777665
Q ss_pred hc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcC
Q 043535 590 LK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSD 630 (881)
Q Consensus 590 ~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 630 (881)
+. .+.++++||+.||.+|++.||++++++ ......+.++|
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 43 346899999999999999999999997 43444444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.3e-06 Score=98.81 Aligned_cols=135 Identities=16% Similarity=0.126 Sum_probs=92.8
Q ss_pred CCccHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh------------------------------------
Q 043535 512 CRPGLKKAV-EDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE------------------------------------ 554 (881)
Q Consensus 512 ~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~------------------------------------ 554 (881)
+.+...+++ +++++.|+.++++|||.+..+..+.++.++..++
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 343445555 8899999999999999999999999999876650
Q ss_pred --hhcC--------------------CHHH-------HHHHHhh----hee------eeccCHH--HHHHHHHHHhhc--
Q 043535 555 --FRNY--------------------TEEE-------KMEKVEK----IYV------MARASPD--DKLAMVKCLKLK-- 591 (881)
Q Consensus 555 --~~~~--------------------~~~~-------~~~~~~~----~~v------~~~~~p~--~K~~~v~~l~~~-- 591 (881)
...+ .++. +.+.+.+ +.+ +..+.|. .|+..++.+.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0000 0001 1111110 111 2233443 599999888765
Q ss_pred -----CCEEEEEcCCccCHHHHHhCC-ccEeeCCCCcHHHHhhc--------Ceeec-cCCchHHHHHHHH
Q 043535 592 -----GHVVAVTGNGIKDAPALEEAN-VGLSMGIQGTAVAKESS--------DIIIL-DDNFATAVTLLNW 647 (881)
Q Consensus 592 -----g~~v~~iGDg~ND~~~l~~A~-vgIam~~~~~~~a~~~a--------d~vl~-~~~~~~i~~~i~~ 647 (881)
...++++||+.||.+||+.|+ .||+|+ |+.+.+|+.+ +++.. +++-+++.+++.+
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 247899999999999999999 699999 9999998753 44433 5567788877754
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.1e-05 Score=84.09 Aligned_cols=123 Identities=18% Similarity=0.272 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh-hhc---CCHHHHHHHHhhheeeec------cCHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-FRN---YTEEEKMEKVEKIYVMAR------ASPDD 580 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-~~~---~~~~~~~~~~~~~~v~~~------~~p~~ 580 (881)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+.... +.. ..++ ..+... .....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--------g~~~g~~~~~~~~~~~~ 155 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--------GEYAGFDENEPTSRSGG 155 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--------CcEECccCCCcccCCcc
Confidence 47899999999999999999999999999999999999997311 000 0000 000000 11234
Q ss_pred HHHHHHHHhhc--CCEEEEEcCCccCHHHHHhC--CccEeeCCCC-cHHHHhhcCeeeccCCchHHHH
Q 043535 581 KLAMVKCLKLK--GHVVAVTGNGIKDAPALEEA--NVGLSMGIQG-TAVAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 581 K~~~v~~l~~~--g~~v~~iGDg~ND~~~l~~A--~vgIam~~~~-~~~a~~~ad~vl~~~~~~~i~~ 643 (881)
|.+.++.+.+. .+.++++||+.||+.|.+.+ +++++.++.. .+.....+|+++.+ +..+.+
T Consensus 156 K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 156 KAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred HHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 77777777654 35788999999999998884 5555555222 23345568998864 555543
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.1e-05 Score=83.22 Aligned_cols=133 Identities=13% Similarity=0.091 Sum_probs=84.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh----cCCHHHHHHHHhhheee--eccCHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR----NYTEEEKMEKVEKIYVM--ARASPDDKLA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----~~~~~~~~~~~~~~~v~--~~~~p~~K~~ 583 (881)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.... +. ....+.+....+.-..+ .......|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 46899999999999999999999999999999998888754321 10 00000000000000000 0000235899
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHh--hcCeeeccCCchHHHHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKE--SSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~--~ad~vl~~~~~~~i~~~i~ 646 (881)
+++.++...+.++|+|||.||.+|.+.||+.+|-+ .-.+..++ .+.+.. +++..+...++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 99998888888999999999999999999977743 21121221 122222 45777766553
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.14 E-value=8.5e-06 Score=83.33 Aligned_cols=107 Identities=15% Similarity=0.135 Sum_probs=76.1
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-CCHHHHHHHHhhheee-eccCHHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-YTEEEKMEKVEKIYVM-ARASPDDKLAMVK 586 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~v~-~~~~p~~K~~~v~ 586 (881)
..++++++.+.++.++++|++++++||.....+..+++.+|+... +.. +...+ ...... .+. ..+.++.|...++
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~-~g~~~g-~~~~~~~~g~~K~~~l~ 161 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE-DGIYTG-NIDGNNCKGEGKVHALA 161 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC-CCEEeC-CccCCCCCChHHHHHHH
Confidence 346899999999999999999999999999999999999999741 000 00000 000000 000 1133567887777
Q ss_pred HHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 587 CLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 587 ~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
.+.+. + +.+.++||+.+|.+|++.||.++++.
T Consensus 162 ~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 162 ELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 66543 3 36889999999999999999999986
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.14 E-value=2e-05 Score=81.90 Aligned_cols=44 Identities=11% Similarity=0.103 Sum_probs=39.7
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
.+...+++.++|++++++|++++++|||....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45566789999999999999999999999999999999999754
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.2e-06 Score=82.32 Aligned_cols=95 Identities=20% Similarity=0.311 Sum_probs=69.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc---CCHHHHHHHHhhheee--eccCHHHHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN---YTEEEKMEKVEKIYVM--ARASPDDKLAMVK 586 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~---~~~~~~~~~~~~~~v~--~~~~p~~K~~~v~ 586 (881)
++|++.+.++.++++|++++++||.....+..+++.+|+... +.. ..++. .+.. ... ....+..|...++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~~~~~~~g---~~~g-~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANRLEFDDNG---LLTG-PIEGQVNPEGECKGKVLK 148 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeeeEEECCCC---EEeC-ccCCcccCCcchHHHHHH
Confidence 689999999999999999999999999999999999998641 000 00000 0000 000 1234578999998
Q ss_pred HHhhc----CCEEEEEcCCccCHHHHHhC
Q 043535 587 CLKLK----GHVVAVTGNGIKDAPALEEA 611 (881)
Q Consensus 587 ~l~~~----g~~v~~iGDg~ND~~~l~~A 611 (881)
.+++. .+.++++|||.||.+|++.|
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 87654 34689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.9e-06 Score=82.71 Aligned_cols=92 Identities=18% Similarity=0.241 Sum_probs=68.0
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHH---HHHHHHHHH--
Q 043535 514 PGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPD---DKLAMVKCL-- 588 (881)
Q Consensus 514 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~---~K~~~v~~l-- 588 (881)
+++.+.|+.++++|++++++||.....+.++++.+|++...+....... -.+.....+.++. .|...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~----~~~~~~~~~~~~~~~~~K~~~l~~~~~ 167 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFD----NGGGIFTGRITGSNCGGKAEALKELYI 167 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEEC----TTCCEEEEEEEEEEESHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeee----cccceeeeeECCCCCCcHHHHHHHHHH
Confidence 8888999999999999999999999999999999999863110000000 0011123333433 399999999
Q ss_pred ----hhcCCEEEEEcCCccCHHHHH
Q 043535 589 ----KLKGHVVAVTGNGIKDAPALE 609 (881)
Q Consensus 589 ----~~~g~~v~~iGDg~ND~~~l~ 609 (881)
+.....++++|||.||.+|+|
T Consensus 168 ~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 168 RDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HhhcCCCCCeEEEEECCHHHHHHhC
Confidence 345789999999999999996
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.08 E-value=2e-05 Score=81.89 Aligned_cols=40 Identities=13% Similarity=0.088 Sum_probs=36.7
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
..+.+.++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3345899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.01 E-value=2e-05 Score=81.66 Aligned_cols=97 Identities=18% Similarity=0.233 Sum_probs=72.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh----cCCHHHHHHHHhhheeeeccCH--------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR----NYTEEEKMEKVEKIYVMARASP-------- 578 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----~~~~~~~~~~~~~~~v~~~~~p-------- 578 (881)
+++|++.+.++.|+++|+++.++||-....+..+.+.+ +....+- ..+.+.. -...-.|
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~--------~~~kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYI--------TITWPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCee--------EEeccCCcccccccc
Confidence 58999999999999999999999999999999999887 6431100 0000000 0000011
Q ss_pred --HHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 579 --DDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 579 --~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
..|..+++.++.....+.++|||.||+.|.+.||+.++
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 24888888888777789999999999999999999776
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.98 E-value=2e-05 Score=79.37 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=74.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCC-------HHH-HHHHHhhheeeec-cCHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYT-------EEE-KMEKVEKIYVMAR-ASPDD 580 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~-------~~~-~~~~~~~~~v~~~-~~p~~ 580 (881)
-++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+... ++..- ++. +.....++..+.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDV-FIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhh-eeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 36899999999999999999999999999999999999988641 11000 000 0000000000011 11235
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCccCHHHHHhCCccEe
Q 043535 581 KLAMVKCLKLK-GHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 581 K~~~v~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
|.++++.+++. .+.++++|||.||+.|.+.||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 89999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.9e-05 Score=87.89 Aligned_cols=40 Identities=8% Similarity=0.012 Sum_probs=36.9
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
.-+.+.++|++++++|+.++++|||....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999999974
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.3e-05 Score=78.88 Aligned_cols=126 Identities=20% Similarity=0.280 Sum_probs=85.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc--CHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA--SPDDKLAMVKC 587 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~~v~~ 587 (881)
.++.|++.+.++.+++.|+++.++||.....+..+.+..|+... ++. ..... -.... .|+--..+++.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f~~--------~~~~~-~~~~~kp~~~~~~~~~~~ 161 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY-FSV--------VIGGD-SLPNKKPDPAPLLLACEK 161 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC-ccE--------EEcCC-CCCCCCcChHHHHHHHHH
Confidence 45889999999999999999999999999999999999998641 110 00000 00111 22222344444
Q ss_pred HhhcCCEEEEEcCCccCHHHHHhCCc-cEeeC--CC-CcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 588 LKLKGHVVAVTGNGIKDAPALEEANV-GLSMG--IQ-GTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 588 l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~--~~-~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
++...+.++++||+.||+.|.+.||+ +|.+. .+ ..+.....+|+++. ++..+...+.+
T Consensus 162 ~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 162 LGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred cCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 54446679999999999999999999 55553 11 22344456888874 57777766654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.8e-05 Score=81.62 Aligned_cols=44 Identities=7% Similarity=0.045 Sum_probs=39.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP 553 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~ 553 (881)
+...+.+.++|++|+++||.++++||+.......+.+++|+..+
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 44667799999999999999999999999999999999998643
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=5.5e-05 Score=80.71 Aligned_cols=128 Identities=9% Similarity=0.212 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCCch------------h--hhcCCH---------------
Q 043535 511 PCRPGLKKAVEDCQY-AGVNIKMITGDNIFTAKAIATQCGILKP------------E--FRNYTE--------------- 560 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------~--~~~~~~--------------- 560 (881)
.+.+++.++|++|++ .|++++++|||+...+..+.+.+++.-. + ...++.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 456899999999998 7999999999999999988877664210 0 000111
Q ss_pred -------------------------HHHHHH---Hh-h---he-----eeeccCH--HHHHHHHHHHhhc----CCEEEE
Q 043535 561 -------------------------EEKMEK---VE-K---IY-----VMARASP--DDKLAMVKCLKLK----GHVVAV 597 (881)
Q Consensus 561 -------------------------~~~~~~---~~-~---~~-----v~~~~~p--~~K~~~v~~l~~~----g~~v~~ 597 (881)
+.+.+. +. . .. -+..+.| .+|+..++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 111111 10 0 00 1112223 3688888877655 357899
Q ss_pred EcCCccCHHHHHhC----CccEeeCCCCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 598 TGNGIKDAPALEEA----NVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 598 iGDg~ND~~~l~~A----~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
+||+.||.+||+.+ +.||+|| ++. ..|++.+. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999 664 34677776 355555444
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.2e-05 Score=81.74 Aligned_cols=52 Identities=17% Similarity=0.218 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhcCCEEEEEcC----CccCHHHHHhC-CccEeeCCCCcHHHHhhcCee
Q 043535 580 DKLAMVKCLKLKGHVVAVTGN----GIKDAPALEEA-NVGLSMGIQGTAVAKESSDII 632 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGD----g~ND~~~l~~A-~vgIam~~~~~~~a~~~ad~v 632 (881)
+|+..++.+.++.+.|+++|| |.||.+||+.| -.|++++ |+.+.+|..+.++
T Consensus 188 sKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 188 DKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred cHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 688888888887788999999 99999999976 5678887 8999888877654
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.92 E-value=4e-05 Score=72.24 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=74.2
Q ss_pred ccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHH--------HHhhheeeeccCHH
Q 043535 508 IKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKME--------KVEKIYVMARASPD 579 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~--------~~~~~~v~~~~~p~ 579 (881)
-..++.+++.+.+++|+++|++++++||+....+...++.+|+....-.-...+.... .......+.+-.++
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 4458899999999999999999999999999999999999998431000000000000 00001122344566
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC-ccEe
Q 043535 580 DKLAMVKCLKLKGHVVAVTGNGIKDAPALEEAN-VGLS 616 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~-vgIa 616 (881)
.+..+.+.+......++++||+.+|+.|.+.++ -+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 666666666655678999999999999999844 3443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.7e-05 Score=79.73 Aligned_cols=120 Identities=21% Similarity=0.360 Sum_probs=88.8
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-c------cCHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-R------ASPDDK 581 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-~------~~p~~K 581 (881)
...+-|++.++++.|+++|++..++|+++...+..+.+..|+... +.. +++ + -.|...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~-F~~--------------i~g~~~~~~~KP~P~~l 151 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY-FDV--------------IVGGDDVPPPKPDPEPL 151 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc-cce--------------EEcCCCCCCCCcCHHHH
Confidence 456889999999999999999999999999999999999999862 110 122 2 234445
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCC---ccEeeCCC-CcHHHHhhcCeeeccCCchHHHHHH
Q 043535 582 LAMVKCLKLKGHVVAVTGNGIKDAPALEEAN---VGLSMGIQ-GTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 582 ~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~---vgIam~~~-~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
..+.+.+....+.++||||..+|+.|=+.|+ +|+..|.+ ........+|+++.+ ...+...+
T Consensus 152 ~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 152 LLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 5555555544457999999999999999999 66777643 344555669999874 55555443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.79 E-value=7.8e-05 Score=78.59 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHH-----HHhhc---C-eeeccCCchHHHHHH
Q 043535 579 DDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV-----AKESS---D-IIILDDNFATAVTLL 645 (881)
Q Consensus 579 ~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~-----a~~~a---d-~vl~~~~~~~i~~~i 645 (881)
..|...++.++++ .+.|+++||+.||.+||..++-||.++ |+.+. ..... . +......-.+|++.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 4799999999877 245777899999999999999999999 88877 22222 2 444455666777777
Q ss_pred HH
Q 043535 646 NW 647 (881)
Q Consensus 646 ~~ 647 (881)
.|
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00017 Score=73.85 Aligned_cols=123 Identities=15% Similarity=0.253 Sum_probs=82.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhh-eeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKI-YVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~-~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.+++|+++|+++.++|+.....+....+..|+... ++.. +... ....+-.|+--.++++.+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~-f~~i--------~~~~~~~~~KP~~~~~~~~~~~~~ 145 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL-FDHV--------IGSDEVPRPKPAPDIVREALRLLD 145 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh-eeeE--------EecCcCCCCCCChHHHHHHHHHcC
Confidence 6789999999999999999999999999999999999998641 1100 0000 0011222333334444444
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEe-e--CC-CCcHHHHhhcCeeeccCCchHHHHH
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLS-M--GI-QGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIa-m--~~-~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
-..+.+++|||+.+|+.+-+.||+... + |. +..+..+..+|+++.+ +..+..+
T Consensus 146 ~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~ 202 (205)
T TIGR01454 146 VPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLAL 202 (205)
T ss_pred CChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHH
Confidence 445679999999999999999999632 2 21 2233456678998753 5555543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00032 Score=72.37 Aligned_cols=119 Identities=13% Similarity=0.182 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+... ++. .+.+ +..|+--.++
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~-f~~-------------i~~~~~~~~~Kp~p~~~~~~ 147 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF-FDV-------------VITLDDVEHAKPDPEPVLKA 147 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc-eeE-------------EEecCcCCCCCCCcHHHHHH
Confidence 3789999999999999999999999999999999999998751 110 0111 1223333344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc---EeeCCCCcH-HHHhhcCeeeccCCchHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG---LSMGIQGTA-VAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg---Iam~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 645 (881)
++.+......+++|||+.+|+.|-+.||+- +.-+....+ .....+|+++. ++..+.+.+
T Consensus 148 ~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 148 LELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 444444456789999999999999999994 323311222 23345888875 466666543
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00022 Score=73.03 Aligned_cols=39 Identities=26% Similarity=0.356 Sum_probs=36.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCG 549 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g 549 (881)
++.+.+.+++++|++.|++++++|||....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 577999999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00043 Score=84.78 Aligned_cols=129 Identities=16% Similarity=0.183 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCCc--h----------hh---h------------------
Q 043535 511 PCRPGLKKAVEDCQY-AGVNIKMITGDNIFTAKAIATQCGILK--P----------EF---R------------------ 556 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~----------~~---~------------------ 556 (881)
.+.+++.+++++|.+ .|+.|+++|||............++.- . +. .
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 367899999999999 699999999999999988776555311 0 00 0
Q ss_pred --------------------cCCHH-------HHHHHHhh------hee-----eeccCH--HHHHHHHHHHhhc--CCE
Q 043535 557 --------------------NYTEE-------EKMEKVEK------IYV-----MARASP--DDKLAMVKCLKLK--GHV 594 (881)
Q Consensus 557 --------------------~~~~~-------~~~~~~~~------~~v-----~~~~~p--~~K~~~v~~l~~~--g~~ 594 (881)
..+++ ++.+.+.. ..+ +..+.| -+|+..++.+.+. ...
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 00000 01111111 000 111223 3688888888764 357
Q ss_pred EEEEcCCccCHHHHHhC---CccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 595 VAVTGNGIKDAPALEEA---NVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A---~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
++++||+.||.+||+.+ +.+|+|| ++ +.+|++.+.+. ..+...++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 99999999999999986 6889998 53 56788998754 44554443
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00048 Score=73.84 Aligned_cols=120 Identities=20% Similarity=0.266 Sum_probs=80.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHH------HH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK------LA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K------~~ 583 (881)
.++.|++.++++.|+++|+++.++||.+...+..+.++.|+... ++ ..+.+...+..| ..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~-f~-------------~i~~~d~~~~~Kp~p~~~~~ 165 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRY-FR-------------WIIGGDTLPQKKPDPAALLF 165 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhh-Ce-------------EEEecCCCCCCCCCcHHHHH
Confidence 46789999999999999999999999999999988888887531 10 012222222222 22
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeC--CC-CcHHHHhhcCeeeccCCchHHHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMG--IQ-GTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~--~~-~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
+.+.+.-..+.+++|||+.||+.|.+.||+. +++. .+ ..+.....+|+++. ++..+.+++
T Consensus 166 ~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 166 VMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 2333322346799999999999999999983 4443 12 22234457898884 466665443
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00038 Score=71.70 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=77.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec-----cC--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR-----AS--PDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~-----~~--p~~K~~ 583 (881)
++.|++.+.++.|+++|+++.++|+.+...+..+.++.|+... ++. +++. .. |+-=..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f~~--------------~~~~~~~~~~Kp~p~~~~~ 149 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKY-FSV--------------LIGGDSLAQRKPHPDPLLL 149 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhh-CcE--------------EEecCCCCCCCCChHHHHH
Confidence 5789999999999999999999999999999999999998641 110 1111 12 222223
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEe-e--CCCC-cHHHHhhcCeeeccCCchHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLS-M--GIQG-TAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa-m--~~~~-~~~a~~~ad~vl~~~~~~~i~ 642 (881)
+.+.+.-....++++||+.+|+.|.+.||+... + |... .+.....+|+++.+ +..+.
T Consensus 150 ~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~ 210 (213)
T TIGR01449 150 AAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELP 210 (213)
T ss_pred HHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHH
Confidence 333333334679999999999999999998643 3 2111 12233468888753 44443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0025 Score=63.08 Aligned_cols=133 Identities=21% Similarity=0.326 Sum_probs=90.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh-------hh--cCCH------------------HHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-------FR--NYTE------------------EEK 563 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-------~~--~~~~------------------~~~ 563 (881)
.+-|++.++++.|++.= ..+++|-.-..-+.++|..+|++..+ ++ ..++ +++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 46799999999998874 45555666677788999999996541 11 1112 222
Q ss_pred HHHHhhheeeeccCHHHHHHHHHHHhhc------------------CCEEEEEcCCccCHHHHHhCC-cc-EeeCCCCcH
Q 043535 564 MEKVEKIYVMARASPDDKLAMVKCLKLK------------------GHVVAVTGNGIKDAPALEEAN-VG-LSMGIQGTA 623 (881)
Q Consensus 564 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~------------------g~~v~~iGDg~ND~~~l~~A~-vg-Iam~~~~~~ 623 (881)
.+.+.. +|.|..|.+-.+++...+.- ....+++||+..|+.||+.+. -| +|+.-||.+
T Consensus 162 fe~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 222222 67888876655554444332 224578899999999999873 33 666668889
Q ss_pred HHHhhcCeeeccCCchHHHHHHH
Q 043535 624 VAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 624 ~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
-+...||+.+.+.+.......|.
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 89999999998887777666554
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.002 Score=66.39 Aligned_cols=100 Identities=10% Similarity=0.059 Sum_probs=71.9
Q ss_pred CCCccHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCC---Cch---hhhcCCHHHHHHHHhhheeeeccCHHHHHH
Q 043535 511 PCRPGLKKAV-EDCQYAGVNIKMITGDNIFTAKAIATQCGI---LKP---EFRNYTEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi---~~~---~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
.+.|++.+.| +.+++.|++++++|+....-+..+++.+|+ +.- +++. ....-..-..+..++|..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~--------~~tg~~~g~~c~g~~K~~ 166 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQR--------RYGGWVLTLRCLGHEKVA 166 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEE--------EEccEECCccCCChHHHH
Confidence 4589999999 578889999999999999999999999995 220 1000 000000112245678888
Q ss_pred HHHHHh-hcCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 584 MVKCLK-LKGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 584 ~v~~l~-~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
-++..- .......+-||+.||.|||+.|+.+++++
T Consensus 167 ~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 167 QLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 777553 23344556799999999999999999995
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0017 Score=66.73 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=71.7
Q ss_pred CCCccHHHHHH-HHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------hhhcCCHHHHHHHHhhheeeeccCHHHHHH
Q 043535 511 PCRPGLKKAVE-DCQYAGVNIKMITGDNIFTAKAIATQCGILKP------EFRNYTEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~-~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
.+.|++.+.|+ .++++|++++++|+-....+..+|+..++... +++.... ....-..+..++|.+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~g--------g~~~g~~c~g~~Kv~ 165 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNG--------GWVLPLRCLGHEKVA 165 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCC--------ceEcCccCCChHHHH
Confidence 46899999996 78889999999999999999999998655221 1110000 000112355678888
Q ss_pred HHHHHhh-cCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 584 MVKCLKL-KGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 584 ~v~~l~~-~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
-++..-. ......+-||+.||.|||+.||.+++++
T Consensus 166 rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 166 QLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7765532 2334556799999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.001 Score=69.10 Aligned_cols=110 Identities=14% Similarity=0.213 Sum_probs=74.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec-----cCHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR-----ASPDDKLAM 584 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~-----~~p~~K~~~ 584 (881)
-++.|++.++++.|+++|+++.++|+........+.++.|+... ++ .+++. ..|.-. -+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f~--------------~~~~~~~~~~~Kp~~~-~~ 154 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDY-FD--------------ALASAEKLPYSKPHPE-VY 154 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhc-cc--------------EEEEcccCCCCCCCHH-HH
Confidence 35789999999999999999999999999999999999998651 11 01111 112111 22
Q ss_pred HHHHhhc---CCEEEEEcCCccCHHHHHhCCccEeeCCCCc---HHHHhhcCeeecc
Q 043535 585 VKCLKLK---GHVVAVTGNGIKDAPALEEANVGLSMGIQGT---AVAKESSDIIILD 635 (881)
Q Consensus 585 v~~l~~~---g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~~ 635 (881)
.+.+++. .+.++++||+.||+.+-+.||+....-..+. +.-...+|+++.+
T Consensus 155 ~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 155 LNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred HHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 2333333 3568999999999999999998754331221 1223357777653
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0022 Score=68.55 Aligned_cols=118 Identities=10% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHH-Hh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKC-LK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~-l~ 589 (881)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+.. .++. .+.+...+ .|.+.+.. ++
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~-------------vi~~~~~~-~k~~~~~~~l~ 206 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSV-------------VQAGTPIL-SKRRALSQLVA 206 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEE-------------EEecCCCC-CCHHHHHHHHH
Confidence 578999999999999999999999999999999999999865 1110 01111111 12233332 22
Q ss_pred h---cCCEEEEEcCCccCHHHHHhCCccEe-e--CCCCcH-HHHhhcCeeeccCCchHHHHHH
Q 043535 590 L---KGHVVAVTGNGIKDAPALEEANVGLS-M--GIQGTA-VAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 590 ~---~g~~v~~iGDg~ND~~~l~~A~vgIa-m--~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 645 (881)
+ ..+.+++|||+.+|+.+-+.||+-.. + |.+..+ .....+|+++. ++..+.+.+
T Consensus 207 ~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 207 REGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 2 34579999999999999999998633 2 211222 22346899885 466666543
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0025 Score=67.36 Aligned_cols=113 Identities=16% Similarity=0.180 Sum_probs=79.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+... ++. .+.+ +-.|+--..+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-Fd~-------------iv~~~~~~~~KP~p~~~~~a 173 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF-FQA-------------VIIGSECEHAKPHPDPYLKA 173 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh-CcE-------------EEecCcCCCCCCChHHHHHH
Confidence 4688999999999999999999999999999999999998741 110 1122 2223333444
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccE-eeCC-CCcH-HHHhhcCeeeccCC
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGL-SMGI-QGTA-VAKESSDIIILDDN 637 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI-am~~-~~~~-~a~~~ad~vl~~~~ 637 (881)
.+.+.-..+.+++|||+.+|+.+-+.||+-. ++.. ...+ .....+|+++.+..
T Consensus 174 ~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~ 229 (248)
T PLN02770 174 LEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYE 229 (248)
T ss_pred HHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccch
Confidence 4555444567999999999999999999853 3321 1112 22346888887544
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0011 Score=69.02 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=62.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC-HHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGD----NIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS-PDDKLAMV 585 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~-p~~K~~~v 585 (881)
.+.+++.+.++.++++|+++.++|++ ...++..+.+.+|+... +. .+++.-. +..|..-.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f~--------------~i~~~d~~~~~Kp~~~ 178 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-NP--------------VIFAGDKPGQYQYTKT 178 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-ee--------------EEECCCCCCCCCCCHH
Confidence 34555999999999999999999999 77799999999999751 10 1222211 00111112
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
..+++.+ .++|+||+.||..+-+.|++-
T Consensus 179 ~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 179 QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 3445555 478999999999999999884
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0048 Score=61.03 Aligned_cols=38 Identities=11% Similarity=0.098 Sum_probs=34.9
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 515 GLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 515 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
.+...+.+|+++|++|+.+|.........+-+.+|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 47788999999999999999999999999999999873
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0019 Score=68.22 Aligned_cols=127 Identities=12% Similarity=0.148 Sum_probs=81.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc------CCHHHHHHHHhhheeeeccCH----H
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN------YTEEEKMEKVEKIYVMARASP----D 579 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------~~~~~~~~~~~~~~v~~~~~p----~ 579 (881)
-+++||+.+.++.|+++|+++.++||-....+..+.++.|+......- .+++. ..-.-..| .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG--------vltG~~~P~i~~~ 191 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG--------VLKGFKGPLIHTF 191 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC--------eEeCCCCCccccc
Confidence 467999999999999999999999999999999999999986421100 00000 00010112 3
Q ss_pred HHHHHHHH-H----h--hcCCEEEEEcCCccCHHHHHhC---Cc--cEeeCCCCc-----HHHHhhcCeeeccCCchHHH
Q 043535 580 DKLAMVKC-L----K--LKGHVVAVTGNGIKDAPALEEA---NV--GLSMGIQGT-----AVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 580 ~K~~~v~~-l----~--~~g~~v~~iGDg~ND~~~l~~A---~v--gIam~~~~~-----~~a~~~ad~vl~~~~~~~i~ 642 (881)
.|.+.+.. . . .....|+++|||.||++|..-. .- .|+.= |.. +.-+++=|+|+.+|.--.++
T Consensus 192 ~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfl-n~~~e~~l~~y~~~~Divl~~D~t~~v~ 270 (277)
T TIGR01544 192 NKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYL-NDRVDELLEKYMDSYDIVLVQDETLEVA 270 (277)
T ss_pred ccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEec-ccCHHHHHHHHHHhCCEEEECCCCchHH
Confidence 45554432 2 2 1235788999999999995433 11 23332 222 23457889999987666666
Q ss_pred HHH
Q 043535 643 TLL 645 (881)
Q Consensus 643 ~~i 645 (881)
..|
T Consensus 271 ~~i 273 (277)
T TIGR01544 271 NSI 273 (277)
T ss_pred HHH
Confidence 554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.003 Score=65.97 Aligned_cols=123 Identities=13% Similarity=0.106 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhh-eeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKI-YVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~-~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|++.|+++.++|+.+...+..+.++.|+.. .++.. .... .-..+-.|+-=..+++.+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i--------~~~~~~~~~KP~p~~~~~~~~~l~ 165 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVL--------IGGDTLAERKPHPLPLLVAAERIG 165 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEE--------EecCcCCCCCCCHHHHHHHHHHhC
Confidence 578999999999999999999999999988888888888864 11100 0000 0011223333345555555
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccE-ee--CCC-C-cHHHHhhcCeeeccCCchHHHHH
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGL-SM--GIQ-G-TAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgI-am--~~~-~-~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
-..+.+++|||+.||+.|-+.||+.. ++ |.. . .......+|+++.+ +..+.+.
T Consensus 166 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~ 223 (229)
T PRK13226 166 VAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNP 223 (229)
T ss_pred CChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHH
Confidence 55678999999999999999999873 33 211 1 11233458998854 5555543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0033 Score=61.21 Aligned_cols=104 Identities=21% Similarity=0.193 Sum_probs=67.3
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHH---HHHHH-----cCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAK---AIATQ-----CGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~---~ia~~-----~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
+|...+++.+++++++++|++++++|||+...+. ....+ .+++...+-..+...... ..+ .+..+..-+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~-~~~-e~i~~~~~~~ 102 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAA-LHR-EVISKKPEVF 102 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhh-hhc-ccccCCHHHH
Confidence 4788999999999999999999999999988874 55555 224321000001111100 111 1222222234
Q ss_pred HHHHHHHHhh-----cCCEEEEEcCCccCHHHHHhCCcc
Q 043535 581 KLAMVKCLKL-----KGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 581 K~~~v~~l~~-----~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
|.+.++.+.+ ....++.+||+.+|+.+.+++++.
T Consensus 103 K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 103 KIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 8888887776 345677799999999999887764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0017 Score=67.42 Aligned_cols=87 Identities=22% Similarity=0.206 Sum_probs=63.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN----IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP--DDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~ 584 (881)
.+.+++.+.++.+++.|+++.++|||. ..++..+.+..|++..+.. ..+++.-++ ..|..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f-------------~vil~gd~~~K~~K~~- 179 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN-------------PVIFAGDKPGQYTKTQ- 179 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce-------------eEEEcCCCCCCCCHHH-
Confidence 477889999999999999999999975 6688899998999431100 013333222 33444
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
.+++.+ .++++||..+|..+-+.||+-
T Consensus 180 --~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 180 --WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred --HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 444555 478899999999999999984
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.004 Score=64.44 Aligned_cols=121 Identities=21% Similarity=0.231 Sum_probs=77.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--chhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL--KPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVK 586 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~ 586 (881)
.++.||+.+.+++|+++|+++.++|+.....+..+.+.+|+. . .++.. +....+ ..+-.|+-=...++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~-~f~~i--------~~~~~~~~~KP~p~~~~~a~~ 156 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGD-DVDAV--------VCPSDVAAGRPAPDLILRAME 156 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhc-cCCEE--------EcCCcCCCCCCCHHHHHHHHH
Confidence 378999999999999999999999999999999999999986 2 11100 000000 01122222223333
Q ss_pred HHhhc-CCEEEEEcCCccCHHHHHhCCccE--eeCCCC--c-HH-HHhhcCeeeccCCchHHH
Q 043535 587 CLKLK-GHVVAVTGNGIKDAPALEEANVGL--SMGIQG--T-AV-AKESSDIIILDDNFATAV 642 (881)
Q Consensus 587 ~l~~~-g~~v~~iGDg~ND~~~l~~A~vgI--am~~~~--~-~~-a~~~ad~vl~~~~~~~i~ 642 (881)
.+.-. .+.++++||+.+|+.+-+.||+.. ++. .+ . +. ....+|+++.+ +..+.
T Consensus 157 ~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~--~~~l~ 216 (220)
T TIGR03351 157 LTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDS--VADLP 216 (220)
T ss_pred HcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecC--HHHHH
Confidence 33322 367999999999999999999986 332 22 1 12 23357777643 44444
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0034 Score=66.66 Aligned_cols=116 Identities=13% Similarity=0.130 Sum_probs=77.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+... ++.. +....+ ..+-.|+-=...++.+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-Fd~i--------i~~~d~~~~KP~Pe~~~~a~~~l~ 179 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF-FSVV--------LAAEDVYRGKPDPEMFMYAAERLG 179 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh-CcEE--------EecccCCCCCCCHHHHHHHHHHhC
Confidence 4689999999999999999999999999999999999998641 1100 000000 11222332234444444
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcHHHHhhcCeeecc
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTAVAKESSDIIILD 635 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a~~~ad~vl~~ 635 (881)
-....+++|||+.+|+.+-+.||+- |++.+.........+|+++.+
T Consensus 180 ~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 180 FIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred CChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 4456799999999999999999984 344323333333457887654
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0014 Score=66.60 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=66.2
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
.+++.+++.++++.|+++|+++.++||.....+..+.+.+|+... ++.. +....+..+-.|+--..+++.+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-f~~~--------~~~~~~~~KP~p~~~~~~~~~~ 174 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL-FPVQ--------IWMEDCPPKPNPEPLILAAKAL 174 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh-CCEE--------EeecCCCCCcCHHHHHHHHHHh
Confidence 345677789999999999999999999999999999999998641 1100 0000011133444445555555
Q ss_pred hhcCCEEEEEcCCccCHHHHHhC
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEA 611 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A 611 (881)
.-....+++|||+.+|+.+-+.|
T Consensus 175 ~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 175 GVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcCcccEEEEeCCHHHHHHHHhC
Confidence 55567899999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0022 Score=69.94 Aligned_cols=107 Identities=11% Similarity=-0.032 Sum_probs=75.4
Q ss_pred ccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHH-HHhhheeeeccCHHHHHHHHH
Q 043535 508 IKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKME-KVEKIYVMARASPDDKLAMVK 586 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~v~~~~~p~~K~~~v~ 586 (881)
..+++.+++.+.+++|++.|++++++||++...+..+.+.+|+....++......... .+... ---+-.|+-+...++
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~-~~~kp~p~~~~~~l~ 262 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQ-GDKRPDDVVKEEIFW 262 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccC-CCCCCcHHHHHHHHH
Confidence 5678999999999999999999999999999999999999888741111100000000 00000 012444666777776
Q ss_pred HHhh-cCCEEEEEcCCccCHHHHHhCCccE
Q 043535 587 CLKL-KGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 587 ~l~~-~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
.+.. ....++|+||..+|+.+-+.||+-.
T Consensus 263 ~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 263 EKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 6543 3478999999999999999999874
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0041 Score=61.75 Aligned_cols=98 Identities=14% Similarity=-0.009 Sum_probs=59.1
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHH--------HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIF--------TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
+.|++.+++++|++.|+++.++|+.... .+....+..|+... +..... ..+..-..+-.|+-=.+
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~------~~~~~~~~KP~p~~~~~ 101 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHK------HGDGCECRKPSTGMLLQ 101 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCC------CCCCCCCCCCCHHHHHH
Confidence 6899999999999999999999987641 23333455666530 000000 00000001122222234
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
+++.+....+.+++|||+.+|+.+-+.|++-..
T Consensus 102 ~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 102 AAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred HHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 444444334679999999999999999998533
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0079 Score=64.40 Aligned_cols=90 Identities=12% Similarity=0.022 Sum_probs=62.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~~ 584 (881)
++-|++.+.++.|+++|+++.++||.....+..+.+..|+....+ +..+.+. -.|+-=...
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-------------d~i~~~~~~~~~KP~p~~~~~a 167 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-------------DHVVTTDDVPAGRPYPWMALKN 167 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-------------eEEEcCCcCCCCCCChHHHHHH
Confidence 467999999999999999999999999998888888776643100 0111111 122222233
Q ss_pred HHHHhhc-CCEEEEEcCCccCHHHHHhCCc
Q 043535 585 VKCLKLK-GHVVAVTGNGIKDAPALEEANV 613 (881)
Q Consensus 585 v~~l~~~-g~~v~~iGDg~ND~~~l~~A~v 613 (881)
.+.+.-. .+.++||||+.+|+.+-+.||+
T Consensus 168 ~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 168 AIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 3333322 3569999999999999999998
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0075 Score=63.98 Aligned_cols=96 Identities=17% Similarity=0.096 Sum_probs=65.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|+++|+++.++|+.....+..+.+++|+...-++.. +....+ ..+-.|+-=....+.+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~i--------i~~~~~~~~KP~p~~~~~a~~~l~ 170 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYN--------VTTDDVPAGRPAPWMALKNAIELG 170 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceE--------EccccCCCCCCCHHHHHHHHHHcC
Confidence 468999999999999999999999999999999988888765100000 000000 11122332233334443
Q ss_pred hc-CCEEEEEcCCccCHHHHHhCCcc
Q 043535 590 LK-GHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 590 ~~-g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
-. .+.+++|||+.+|+.+-+.||+.
T Consensus 171 ~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 171 VYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred CCCchheEEECCcHHHHHHHHHCCCe
Confidence 22 35699999999999999999975
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0083 Score=56.58 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=64.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC--------HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN--------IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKL 582 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 582 (881)
++.|++.++++.|+++|+++.++|+.. ...+..+.+.+|+... ...... -..+-.|+-=.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~-----------~~~KP~~~~~~ 92 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VLYACP-----------HCRKPKPGMFL 92 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EEEECC-----------CCCCCChHHHH
Confidence 578999999999999999999999998 7788888898888631 000000 00111222223
Q ss_pred HHHHHHh-hcCCEEEEEcC-CccCHHHHHhCCcc
Q 043535 583 AMVKCLK-LKGHVVAVTGN-GIKDAPALEEANVG 614 (881)
Q Consensus 583 ~~v~~l~-~~g~~v~~iGD-g~ND~~~l~~A~vg 614 (881)
.+++.++ -..+.++|||| ..+|+.+-+.+|+-
T Consensus 93 ~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 93 EALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 4444442 34567999999 69999999999874
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0077 Score=62.31 Aligned_cols=114 Identities=16% Similarity=0.209 Sum_probs=73.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|+++|+++.++|+.....+...-+..|+... ... ..+.. -..+-.|+-=....+.+.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~--~~i~~~~~~--------~~~KP~p~~~~~~~~~~g 152 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP--EVFVTAERV--------KRGKPEPDAYLLGAQLLG 152 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc--cEEEEHHHh--------cCCCCCcHHHHHHHHHcC
Confidence 4789999999999999999999999987777776677777421 100 00000 011122222233334444
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCc-HHHHhhcCeeecc
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGT-AVAKESSDIIILD 635 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~-~~a~~~ad~vl~~ 635 (881)
-..+.+++|||+.+|+.+-+.||+. |++. .+. ......+|+++.+
T Consensus 153 ~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 153 LAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred CCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 4457899999999999999999984 5665 332 2233457777654
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.012 Score=65.17 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=77.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.||+.+.++.|+++|+++.++|+.....+..+.+..|+... ++. .+.+ .-.|+-=...
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y-Fd~-------------Iv~sddv~~~KP~Peifl~A 281 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF-FSV-------------IVAAEDVYRGKPDPEMFIYA 281 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH-ceE-------------EEecCcCCCCCCCHHHHHHH
Confidence 4679999999999999999999999999999999999998651 110 0111 1123333344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcHHH-HhhcCeeecc
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTAVA-KESSDIIILD 635 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a-~~~ad~vl~~ 635 (881)
++.+.-....++|+||+.+|+.+-+.||+- |++. .+.+.. ...||+++.+
T Consensus 282 ~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s 333 (381)
T PLN02575 282 AQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR 333 (381)
T ss_pred HHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC
Confidence 455554567899999999999999999995 3443 332222 2347887754
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0093 Score=69.13 Aligned_cols=123 Identities=12% Similarity=0.087 Sum_probs=79.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
++.||+.+.++.|+++|+++.++|+.....+..+.+.+|+... ++.. +....+-....|+--...++.+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~-f~~i--------~~~d~v~~~~kP~~~~~al~~l-- 398 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW-VTET--------FSIEQINSLNKSDLVKSILNKY-- 398 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh-ccee--------EecCCCCCCCCcHHHHHHHHhc--
Confidence 5789999999999999999999999999999999999998641 1110 0000000112232111222222
Q ss_pred cCCEEEEEcCCccCHHHHHhCCcc-EeeCC-CCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 591 KGHVVAVTGNGIKDAPALEEANVG-LSMGI-QGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
..+.++++||+.+|+.+-+.||+- |++.. ...+.....+|+++. ++..+.+.+.
T Consensus 399 ~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 399 DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 245799999999999999999984 44431 122222345888875 4666665553
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0093 Score=61.72 Aligned_cols=94 Identities=16% Similarity=0.232 Sum_probs=66.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee----ccCH--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA----RASP--DDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~----~~~p--~~K~~~ 584 (881)
++.|++.++++.|+++|++++++|+-+...+....+.+|+... ++ . .+.+ +..| +-=..+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f~------------~-i~~~~~~~~~KP~~~~~~~~ 159 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF-FD------------A-VITSEEEGVEKPHPKIFYAA 159 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh-cc------------E-EEEeccCCCCCCCHHHHHHH
Confidence 5789999999999999999999999998888888888888641 11 0 0111 1122 222233
Q ss_pred HHHHhhcCCEEEEEcCCc-cCHHHHHhCCcc-EeeC
Q 043535 585 VKCLKLKGHVVAVTGNGI-KDAPALEEANVG-LSMG 618 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~ 618 (881)
.+.+.-....+++|||+. +|+.+-+.||+- |.+.
T Consensus 160 ~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 160 LKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 333333346799999998 999999999984 5554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0099 Score=60.41 Aligned_cols=96 Identities=13% Similarity=0.184 Sum_probs=66.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+++++|+++|+++.++|+-+...+....+.+|+... ++.. +....+ ..+-.|+-=..+.+.+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-fd~i--------~~s~~~~~~KP~~~~~~~~~~~~~ 162 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-FDAV--------LSADAVRAYKPAPQVYQLALEALG 162 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-hhee--------EehhhcCCCCCCHHHHHHHHHHhC
Confidence 4789999999999999999999999999999999999998541 1110 000000 01112221123334444
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
-..+.+++|||+.+|+.+-+.||+-.
T Consensus 163 ~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 163 VPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred CChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 34567899999999999999999863
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.022 Score=57.02 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=69.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheee--
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNI---------------FTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVM-- 573 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~-- 573 (881)
.+.|++.+++++|+++|+++.++|..+. .....+.+..|+... .++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-----------------~i~~~ 91 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-----------------GIYYC 91 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-----------------eEEEC
Confidence 3689999999999999999999998763 112223334444210 011
Q ss_pred ----------eccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcH---HHHhhc--CeeeccCC
Q 043535 574 ----------ARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTA---VAKESS--DIIILDDN 637 (881)
Q Consensus 574 ----------~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~---~a~~~a--d~vl~~~~ 637 (881)
.+-.|+--..+.+.+.-..+.++||||+.+|+.+-+.||+. |.+. .+.. .....+ |+++.+
T Consensus 92 ~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~-- 168 (181)
T PRK08942 92 PHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS-- 168 (181)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--
Confidence 11223333344444444457899999999999999999985 3332 2211 122235 777643
Q ss_pred chHHHHHH
Q 043535 638 FATAVTLL 645 (881)
Q Consensus 638 ~~~i~~~i 645 (881)
+..+.+.+
T Consensus 169 l~el~~~l 176 (181)
T PRK08942 169 LADLPQAL 176 (181)
T ss_pred HHHHHHHH
Confidence 55555444
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.017 Score=57.00 Aligned_cols=112 Identities=7% Similarity=-0.033 Sum_probs=72.8
Q ss_pred eeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGD-NIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 502 ~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
......-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+.... ... .+.+.+. ..+.++..+..
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~-~~~---~~~~~Fd-~iv~~~~~~~~ 110 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG-KTV---PMHSLFD-DRIEIYKPNKA 110 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC-Ccc---cHHHhce-eeeeccCCchH
Confidence 44444555678899999999999999999999987 888999999999985100 000 0000111 11222221112
Q ss_pred H--HHHHHHHhhc------CCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 581 K--LAMVKCLKLK------GHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 581 K--~~~v~~l~~~------g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
| ..+.+.+.+. .+.++|+||+..|+.+-+.|++-+..-
T Consensus 111 kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 111 KQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred HHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 2 2344544432 357999999999999999999976543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0084 Score=57.69 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=73.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC----CCchhhhcCCHHH-HHHHHhhheeeeccC--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCG----ILKPEFRNYTEEE-KMEKVEKIYVMARAS--PDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~-~~~~~~~~~v~~~~~--p~~K~~ 583 (881)
.++|+-++.++.+++++++++++|+....-...+-+..+ +...+ -.+.+. +...-+...++..-+ ..+|..
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~id--i~sn~~~ih~dg~h~i~~~~ds~fG~dK~~ 150 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCID--IVSNNDYIHIDGQHSIKYTDDSQFGHDKSS 150 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeE--EeecCceEcCCCceeeecCCccccCCCcch
Confidence 479999999999999999999999988877777777665 22110 000000 000000000111112 247999
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEee
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 617 (881)
.|+.+++..+.+.++|||+.|++|-+.+|+=.|=
T Consensus 151 vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 151 VIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred hHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 9999999999999999999999999999887753
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.029 Score=62.22 Aligned_cols=62 Identities=16% Similarity=0.171 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhc-C-----C-EEEEEcCCccCHHHHHh-----CCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G-----H-VVAVTGNGIKDAPALEE-----ANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 580 ~K~~~v~~l~~~-g-----~-~v~~iGDg~ND~~~l~~-----A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
+|+..++.+.++ | . .++++||+.||..||+. +++||+|+ ++.... .|++.+.+ ...+...+.
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~t--~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKES--NAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCCc--cceEEcCC--HHHHHHHHH
Confidence 788888887765 2 1 24899999999999996 69999998 654422 57887764 555665553
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.011 Score=61.35 Aligned_cols=94 Identities=11% Similarity=0.047 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec----cCH--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR----ASP--DDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~----~~p--~~K~~~ 584 (881)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+.. .++ ..+.+. ..| +-=..+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd-------------~iv~s~~~~~~KP~p~~~~~~ 158 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLD-------------LLLSTHTFGYPKEDQRLWQAV 158 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCC-------------EEEEeeeCCCCCCCHHHHHHH
Confidence 578999999999999999999999999888888888888754 111 011111 122 111222
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc--EeeC
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG--LSMG 618 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam~ 618 (881)
.+.+.-..+.+++|||+.+|+.+-+.||+. +++.
T Consensus 159 ~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 159 AEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred HHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 233333345799999999999999999996 4444
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.016 Score=71.36 Aligned_cols=50 Identities=8% Similarity=0.029 Sum_probs=37.4
Q ss_pred CceeeeeccccCCCCccHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHHc
Q 043535 499 NLILLGLLGIKDPCRPGLKKAVEDC-QYAGVNIKMITGDNIFTAKAIATQC 548 (881)
Q Consensus 499 ~l~~lG~i~~~D~~r~~~~~~I~~l-~~~Gi~v~~~TGd~~~~a~~ia~~~ 548 (881)
|.+++-.....-.+.++..+++++| ++.|+.|+++|||...+.......+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4444433222335678999999997 7889999999999999998877543
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.024 Score=61.25 Aligned_cols=117 Identities=13% Similarity=0.145 Sum_probs=72.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
++.|++.+.++.|++.|+++.++|+.+......+-+..+.... .+.....++ .-..+-.|+-=..+.+.+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~--------~~~~KP~p~~~~~a~~~~ 215 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDD--------VPKKKPDPDIYNLAAETL 215 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccc--------cCCCCCCHHHHHHHHHHh
Confidence 5789999999999999999999999998888877665532110 000000000 001122232333444444
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCc--HHHHhhcCeeecc
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGT--AVAKESSDIIILD 635 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~--~~a~~~ad~vl~~ 635 (881)
.-....+++|||+.+|+.+-+.||+.......+. ......+|+++.+
T Consensus 216 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 216 GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 4445679999999999999999998644321321 1112357888754
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.02 Score=56.70 Aligned_cols=85 Identities=20% Similarity=0.219 Sum_probs=62.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH--HHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN-IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP--DDKLAMVKC 587 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~v~~ 587 (881)
.+.+++.+++++|++.|++++++|+.+ ...+..+.+.+|+.. .+....| +-=..+.+.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~-------------------~~~~~KP~p~~~~~~l~~ 103 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV-------------------LPHAVKPPGCAFRRAHPE 103 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------------------EcCCCCCChHHHHHHHHH
Confidence 578999999999999999999999988 677788888888753 1111223 222223333
Q ss_pred HhhcCCEEEEEcCCc-cCHHHHHhCCcc
Q 043535 588 LKLKGHVVAVTGNGI-KDAPALEEANVG 614 (881)
Q Consensus 588 l~~~g~~v~~iGDg~-ND~~~l~~A~vg 614 (881)
+.-....++||||.. .|+.+-+.||+-
T Consensus 104 ~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 104 MGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred cCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 333345699999998 799999999984
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.012 Score=58.87 Aligned_cols=87 Identities=15% Similarity=0.237 Sum_probs=60.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-----ccCHHH--HHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-----RASPDD--KLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-----~~~p~~--K~~ 583 (881)
++.|++.++++.|+++|+++.++|+. ..+..+.+.+|+... ++. +++ +..|.. =..
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~-f~~--------------v~~~~~~~~~kp~~~~~~~ 150 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY-FDA--------------IVDADEVKEGKPHPETFLL 150 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH-CCE--------------eeehhhCCCCCCChHHHHH
Confidence 68999999999999999999999987 567778888887541 111 111 112221 112
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
+.+.+.-..+.+++|||+.+|+.+-+.||+.
T Consensus 151 ~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 151 AAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 2222222245688999999999999999885
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.013 Score=58.64 Aligned_cols=93 Identities=16% Similarity=0.238 Sum_probs=59.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCC-HHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYT-EEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~-~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.++++.|+++|+++.++|+... +....+.+|+.. .++..- .++ .-..+-.|+-=..+.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~-~f~~~~~~~~--------~~~~kp~p~~~~~~~~~~~ 155 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLID-YFDAIVDPAE--------IKKGKPDPEIFLAAAEGLG 155 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHh-hCcEEEehhh--------cCCCCCChHHHHHHHHHcC
Confidence 5789999999999999999999997643 456678888754 111100 000 0011112222122333333
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
-....+++|||+.+|+.+-+.||+-
T Consensus 156 ~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 156 VSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred CCHHHeEEEecCHHHHHHHHHcCCE
Confidence 2345689999999999999999985
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.013 Score=57.71 Aligned_cols=92 Identities=15% Similarity=0.254 Sum_probs=68.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~ 583 (881)
.++.|++.+.+++|+++|++++++|+.+........+++|+... ++. .+.+. -.|+-=..
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-f~~-------------i~~~~~~~~~Kp~~~~~~~ 141 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-FDE-------------IISSDDVGSRKPDPDAYRR 141 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-CSE-------------EEEGGGSSSSTTSHHHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-ccc-------------ccccchhhhhhhHHHHHHH
Confidence 35789999999999999999999999999999999999998731 110 01111 11222334
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
+++.+.-....+++|||+..|+.+-+.||+.-
T Consensus 142 ~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 142 ALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 44444444677999999999999999998753
|
... |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.038 Score=55.06 Aligned_cols=89 Identities=18% Similarity=0.235 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.+++|+++|++++++|+..... ..+..++|+... ++. .+++ +-.|+--..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-f~~-------------i~~~~~~~~~KP~~~~~~~~ 149 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-FDV-------------VIFSGDVGRGKPDPDIYLLA 149 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-CCE-------------EEEcCCCCCCCCCHHHHHHH
Confidence 578999999999999999999999988887 566556887531 111 1111 1222223344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
.+.+.-....++++||...|+.+-+.+|+-
T Consensus 150 ~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 150 LKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 444444467899999999999999999873
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.027 Score=54.24 Aligned_cols=90 Identities=19% Similarity=0.214 Sum_probs=60.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNI---------------FTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR 575 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~ 575 (881)
++.|++.++++.|+++|+++.++|..+. ..+..+.+.+|+.... ..++.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------------~~~~~ 90 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG----------------VLFCP 90 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE----------------EEECC
Confidence 4789999999999999999999998762 4556677788875200 01110
Q ss_pred c-------CHHHHHHHHHH-Hhh---cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 576 A-------SPDDKLAMVKC-LKL---KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 576 ~-------~p~~K~~~v~~-l~~---~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
. ...-+.++... +++ ..+.+++|||...|+.+-+.+++-..
T Consensus 91 ~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 91 HHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0 01112223222 222 34579999999999999999988543
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.041 Score=58.22 Aligned_cols=86 Identities=10% Similarity=0.103 Sum_probs=61.2
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIF---TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMV 585 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 585 (881)
..++-|++.+.++.+++.|+++.++|++... .+....++.|+.....+ .++.|-....|..-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d--------------~lllr~~~~~K~~rr 181 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE--------------HLLLKKDKSSKESRR 181 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc--------------eEEeCCCCCCcHHHH
Confidence 4457899999999999999999999999744 34456677888641111 144443334566666
Q ss_pred HHHhhcCCEEEEEcCCccCHHHH
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPAL 608 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l 608 (881)
+.+.+.-.+++++||..+|....
T Consensus 182 ~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 182 QKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred HHHHhcCCEEEEECCCHHHhhhh
Confidence 66666556799999999998654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.053 Score=56.23 Aligned_cols=118 Identities=14% Similarity=0.141 Sum_probs=74.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc----CH--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA----SP--DDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~----~p--~~K~~~ 584 (881)
++.|++.++++.|+ +|+++.++|+.....+....+.+|+.. .++ ..+.+.. .| +-=..+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd-------------~v~~~~~~~~~KP~p~~~~~~ 159 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRD-YFD-------------LLVISEQVGVAKPDVAIFDYA 159 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHH-HcC-------------EEEEECccCCCCCCHHHHHHH
Confidence 47899999999999 689999999999888888888888753 111 1122221 22 222233
Q ss_pred HHHHhhc-CCEEEEEcCCc-cCHHHHHhCCcc-EeeCCCCcH-HHHhhcCeeeccCCchHHHHHH
Q 043535 585 VKCLKLK-GHVVAVTGNGI-KDAPALEEANVG-LSMGIQGTA-VAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 585 v~~l~~~-g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 645 (881)
++.+.-. .+.+++|||+. +|+.+-+.||+- |.+...+.. .....+|+++.+ +..+.+++
T Consensus 160 ~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 160 LEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 3333322 25799999998 799999999985 444311211 111246777753 55555443
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.037 Score=57.27 Aligned_cols=114 Identities=13% Similarity=0.105 Sum_probs=74.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-------ccCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-------RASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-------~~~p~~K~~ 583 (881)
++.|++.+.+++|+++ +++.++|+-....+..+.+++|+... ++ .+++ +-.|+-=..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~-fd--------------~i~~~~~~~~~KP~~~~~~~ 160 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPF-FD--------------DIFVSEDAGIQKPDKEIFNY 160 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhh-cC--------------EEEEcCccCCCCCCHHHHHH
Confidence 5789999999999999 99999999999999999999998641 11 0221 112222233
Q ss_pred HHHHH-hhcCCEEEEEcCCc-cCHHHHHhCCcc-EeeCC-CCcHHHHhhcCeeeccCCchHHH
Q 043535 584 MVKCL-KLKGHVVAVTGNGI-KDAPALEEANVG-LSMGI-QGTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 584 ~v~~l-~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~-~~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
.++.+ .-....+++|||+. +|+.+-+.+|+- |.... ...+.....+|+++. ++..+.
T Consensus 161 ~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~ 221 (224)
T TIGR02254 161 ALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELY 221 (224)
T ss_pred HHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHH
Confidence 34444 32345799999998 899999999974 33321 111122234566654 344443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.058 Score=53.72 Aligned_cols=122 Identities=15% Similarity=0.128 Sum_probs=63.3
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHH---------------HHHHHHHHcCCCchhhhcCC--HHHHHHHHhhheeee
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIF---------------TAKAIATQCGILKPEFRNYT--EEEKMEKVEKIYVMA 574 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~--~~~~~~~~~~~~v~~ 574 (881)
+.|++.+++++|+++|+++.++|.-+.. ....+..+.|+.-..+-... .... .......-..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~ 105 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGV-EEFRQVCDCR 105 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCccc-ccccCCCCCC
Confidence 5789999999999999999999977631 11122223332210000000 0000 0000000001
Q ss_pred ccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccE--eeCCCCcH---HHHhhcCeeecc
Q 043535 575 RASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGL--SMGIQGTA---VAKESSDIIILD 635 (881)
Q Consensus 575 ~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI--am~~~~~~---~a~~~ad~vl~~ 635 (881)
+-.|+-=....+.+.-....++||||..+|+.+-+.|++.. .+. .+.. .....+|+++.+
T Consensus 106 KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 106 KPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS 170 (176)
T ss_pred CCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc
Confidence 11222222333333333567889999999999999999853 433 2221 122348888753
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.038 Score=62.19 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=72.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-HcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIAT-QCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l 588 (881)
++.|++.+.+++|++.|+++.++|+.....+....+ ..|+.. .++.. +....+ ..+-.|+-=..+++.+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~-~Fd~i--------i~~d~v~~~KP~p~~~~~a~~~l 163 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKE-SFSVI--------VGGDEVEKGKPSPDIFLEAAKRL 163 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHh-hCCEE--------EehhhcCCCCCCHHHHHHHHHHc
Confidence 467999999999999999999999999888877665 567643 11100 000000 1112233333444444
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCc--HHHHhhcCeeec
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGT--AVAKESSDIIIL 634 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~--~~a~~~ad~vl~ 634 (881)
.-..+.+++|||+.+|+.+-+.||+. |++. .+. ......+|.++.
T Consensus 164 gv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 164 NVEPSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVIN 211 (382)
T ss_pred CCChhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeC
Confidence 44456799999999999999999986 4443 322 222334666554
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.036 Score=54.27 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=59.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN---------------IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA- 574 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~- 574 (881)
++-|++.+++++|+++|+++.++|.-. ...+..+.+.+|+.- +. .+++
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d~-------------ii~~~ 92 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---DD-------------VLICP 92 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---eE-------------EEECC
Confidence 467899999999999999999999752 345566677777751 10 0122
Q ss_pred ----ccCH--HHHHHHHHHHh-hc---CCEEEEEcCCccCHHHHHhCCccEe
Q 043535 575 ----RASP--DDKLAMVKCLK-LK---GHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 575 ----~~~p--~~K~~~v~~l~-~~---g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
.... .-|..++..+. +. ...+.||||+.+|+.+-+.|++...
T Consensus 93 ~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 93 HFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 1100 11223333332 22 3569999999999999999999644
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.05 Score=52.03 Aligned_cols=110 Identities=14% Similarity=0.186 Sum_probs=77.7
Q ss_pred HHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC
Q 043535 470 IQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCG 549 (881)
Q Consensus 470 ~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g 549 (881)
.+.+..+|.+.+.+-. |-+++..= ..+..|++.+=+++++++|++++++|..+...+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~Dl-------------DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDL-------------DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEec-------------cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 4567777877766542 22333221 23567889999999999999999999999999999999999
Q ss_pred CCchhhhcCCHHHHHHHHhhheeeeccCHHHH--HHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCc
Q 043535 550 ILKPEFRNYTEEEKMEKVEKIYVMARASPDDK--LAMVKCLKLKGHVVAVTGNG-IKDAPALEEANV 613 (881)
Q Consensus 550 i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~~v~~l~~~g~~v~~iGDg-~ND~~~l~~A~v 613 (881)
++. ++--..|-.+ .+.++.++-..+.|+||||- ..|+-+=..||+
T Consensus 85 v~f-------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF-------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce-------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 986 5444455443 24444444456789999997 457666555555
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.25 Score=54.41 Aligned_cols=46 Identities=13% Similarity=0.117 Sum_probs=37.1
Q ss_pred CceeeeeccccC--CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 043535 499 NLILLGLLGIKD--PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIA 545 (881)
Q Consensus 499 ~l~~lG~i~~~D--~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia 545 (881)
|.+++-++.-.| .+.++..++|++|. +|++++++|||....+..+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 556665554333 47899999999999 78999999999999998874
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.084 Score=54.66 Aligned_cols=102 Identities=22% Similarity=0.326 Sum_probs=68.1
Q ss_pred CCCccHHHHHHHH--HhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-------CCHHHHHH-HHhhheeeeccCH-H
Q 043535 511 PCRPGLKKAVEDC--QYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-------YTEEEKME-KVEKIYVMARASP-D 579 (881)
Q Consensus 511 ~~r~~~~~~I~~l--~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-------~~~~~~~~-~~~~~~v~~~~~p-~ 579 (881)
|+.|+..+.++.+ ++.|+.+.++|--+..--..+-+.-|+... +.+ ..+..... ......-+.++.| .
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~-f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~Nm 149 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC-FSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNM 149 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc-cceEEeCCceecCCceEEEeCccCCCCCcCCCcc
Confidence 5788999999999 568999999999999999999999998652 100 00000000 0000012233333 3
Q ss_pred HHHHHHHHHhhc----C---CEEEEEcCCccCHH-HHH--hCCc
Q 043535 580 DKLAMVKCLKLK----G---HVVAVTGNGIKDAP-ALE--EANV 613 (881)
Q Consensus 580 ~K~~~v~~l~~~----g---~~v~~iGDg~ND~~-~l~--~A~v 613 (881)
=|..+++.+++. | .+|.+||||.||.. +++ .+|+
T Consensus 150 CK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~ 193 (234)
T PF06888_consen 150 CKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDV 193 (234)
T ss_pred chHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCE
Confidence 589999888765 4 68999999999954 433 4554
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.025 Score=54.84 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=56.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
...+++.+.++.|+++|+++.++|+.....+....+.. +.. .+... .....+..+-.|+-=..+.+.+.-
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~-~f~~i--------~~~~~~~~Kp~~~~~~~~~~~~~~ 133 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGD-YFDLI--------LGSDEFGAKPEPEIFLAALESLGL 133 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHh-cCcEE--------EecCCCCCCcCHHHHHHHHHHcCC
Confidence 34578999999999999999999999999988877764 322 00000 000001111122222222233322
Q ss_pred cCCEEEEEcCCccCHHHHHhCC
Q 043535 591 KGHVVAVTGNGIKDAPALEEAN 612 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~ 612 (881)
.. .+++|||+.+|+.+-+.||
T Consensus 134 ~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 134 PP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CC-CEEEEeCCHHHHHHHHHcc
Confidence 24 7899999999999988775
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.082 Score=55.70 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=33.1
Q ss_pred HHHHHHHHHhhcCCEEEEEcC----CccCHHHHHh-CCccEeeC
Q 043535 580 DKLAMVKCLKLKGHVVAVTGN----GIKDAPALEE-ANVGLSMG 618 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGD----g~ND~~~l~~-A~vgIam~ 618 (881)
+|+..++.|+ ..+.|+++|| |.||.+||+. --.|+++.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 6899999999 7778999999 8999999997 55688886
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.065 Score=54.62 Aligned_cols=94 Identities=15% Similarity=0.164 Sum_probs=59.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l~ 589 (881)
++-|++.++++.|+++|+++.++|+-... .....+.+|+... ++.. +....+ ..+-.|+-=..+++.+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~-fd~i--------~~s~~~~~~KP~~~~~~~~~~~~~ 174 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY-FDFV--------VTSYEVGAEKPDPKIFQEALERAG 174 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh-cceE--------EeecccCCCCCCHHHHHHHHHHcC
Confidence 57899999999999999999999986654 4667777887531 1100 000000 01112221122333333
Q ss_pred hcCCEEEEEcCCc-cCHHHHHhCCcc
Q 043535 590 LKGHVVAVTGNGI-KDAPALEEANVG 614 (881)
Q Consensus 590 ~~g~~v~~iGDg~-ND~~~l~~A~vg 614 (881)
-....+++|||+. +|+.+-+.||+-
T Consensus 175 ~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 175 ISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred CChhHEEEECCCchHHHHHHHHcCCe
Confidence 3356799999997 899998888864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.017 Score=55.69 Aligned_cols=92 Identities=16% Similarity=0.029 Sum_probs=64.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec-cCHHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR-ASPDDKLAMVKCL 588 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~-~~p~~K~~~v~~l 588 (881)
-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+|+...-+. .++++ .....|-.+.+.+
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~--------------~i~~~~d~~~~KP~~~k~l 108 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGY--------------RRLFRDECVFVKGKYVKDL 108 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEee--------------eEEECccccccCCeEeecH
Confidence 357999999999999 5799999999999999999999887531001 02222 1111222244444
Q ss_pred hh---cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 589 KL---KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 589 ~~---~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
+. ..+.+++|||..+|..+-+.+++-|.
T Consensus 109 ~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 109 SLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred HHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 43 35689999999999999777766654
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.12 Score=53.25 Aligned_cols=80 Identities=18% Similarity=0.108 Sum_probs=57.1
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC-H------H
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFT---AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS-P------D 579 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~-p------~ 579 (881)
-+.-|++.+.++.++++|++|+++|||.... +..-.++.|++.. + .++-|.. . .
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~--------------~LiLR~~~d~~~~~~~ 182 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--K--------------HLILRGLEDSNKTVVT 182 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--C--------------eeeecCCCCCCchHhH
Confidence 4788999999999999999999999999755 3344456777641 0 1333321 1 1
Q ss_pred HHHHHHHHHhhcCCE-EEEEcCCccCH
Q 043535 580 DKLAMVKCLKLKGHV-VAVTGNGIKDA 605 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~-v~~iGDg~ND~ 605 (881)
-|.+.-+.+.+.|++ ++.+||-.+|.
T Consensus 183 yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 183 YKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred HHHHHHHHHHhCCceEEEEECCChHHh
Confidence 277777777777765 56689998886
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.077 Score=54.72 Aligned_cols=98 Identities=11% Similarity=0.119 Sum_probs=65.7
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC---CCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCG---ILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMV 585 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 585 (881)
+-++.|++.+++++|+++|+++.++|..+......+.+..+ +.. .++. .+ ...+...-.|+-=..+.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~~--------~f-d~~~g~KP~p~~y~~i~ 162 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFSG--------YF-DTTVGLKTEAQSYVKIA 162 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcce--------EE-EeCcccCCCHHHHHHHH
Confidence 44689999999999999999999999998887777666542 221 0110 00 01112222333333444
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
+.+.-..+.++++||...|+.+-++||+-..
T Consensus 163 ~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 163 GQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 4444445679999999999999999999643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.26 Score=51.79 Aligned_cols=95 Identities=11% Similarity=0.083 Sum_probs=61.8
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHH--HHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHH
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAK--AIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK 581 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 581 (881)
|.+.-.+.+-|++.+++++|+++|+++.++|......+. ...+++|+..+.++. +++.. ....
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~--------------Ii~s~-~~~~ 81 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEM--------------IISSG-EIAV 81 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccce--------------EEccH-HHHH
Confidence 555667788999999999999999999999986655444 567888886411111 22111 1111
Q ss_pred HHHHHHHhh---cCCEEEEEcCCccCHHHHHhCCc
Q 043535 582 LAMVKCLKL---KGHVVAVTGNGIKDAPALEEANV 613 (881)
Q Consensus 582 ~~~v~~l~~---~g~~v~~iGDg~ND~~~l~~A~v 613 (881)
..+.+.+++ .+..+.++||+.+|...+..++.
T Consensus 82 ~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 82 QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 122222232 24679999999999988865443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.089 Score=49.34 Aligned_cols=86 Identities=7% Similarity=0.098 Sum_probs=57.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcC-------CCchhhhcCCHHHHHHHHhhheeeeccCHHHH-
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGD-NIFTAKAIATQCG-------ILKPEFRNYTEEEKMEKVEKIYVMARASPDDK- 581 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~~a~~ia~~~g-------i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K- 581 (881)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..| +.. .+. ..+..+..|.-+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~-------------~f~-~~~~~~~~pkp~~ 94 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAE-------------YFD-PLTIGYWLPKSPR 94 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHh-------------hhh-hhhhcCCCcHHHH
Confidence 68999999999999999999999999 7877777777776 211 010 001222223222
Q ss_pred -HHHHHHHh--hcCCEEEEEcCCccCHHHHHh
Q 043535 582 -LAMVKCLK--LKGHVVAVTGNGIKDAPALEE 610 (881)
Q Consensus 582 -~~~v~~l~--~~g~~v~~iGDg~ND~~~l~~ 610 (881)
..+++.+. -..+.++|+||...|...++.
T Consensus 95 ~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 95 LVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 23333333 334789999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.11 Score=53.82 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=57.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHH-HHHHcCCCchhhhcCCHHHHHHHHhhheeeec--------cCHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKA-IATQCGILKPEFRNYTEEEKMEKVEKIYVMAR--------ASPDDK 581 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~--------~~p~~K 581 (881)
++.|++.+.|+.|+++|+++.++||-....... ..+..++.. ... ..+.+. -.|+-=
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-------------~f~-~i~~~~~~~~~~~KP~p~~~ 143 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-------------LMH-HVVTGDDPEVKQGKPAPDIF 143 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-------------hCC-EEEECChhhccCCCCCcHHH
Confidence 468999999999999999999999987654432 221122221 010 112222 122222
Q ss_pred HHHHHHHh---hcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 582 LAMVKCLK---LKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 582 ~~~v~~l~---~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
...++.+. -..+.+++|||+..|+.+-+.||+..
T Consensus 144 ~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 144 LAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 33344443 22467999999999999999999963
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.12 Score=65.73 Aligned_cols=124 Identities=18% Similarity=0.248 Sum_probs=82.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
.+.|++.+.++.|+++|+++.++|+.....+....++.|+....++. .+.+ +-.|+-=...
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~-------------iv~~~~~~~~KP~Pe~~~~a 227 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDA-------------IVSADAFENLKPAPDIFLAA 227 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCE-------------EEECcccccCCCCHHHHHHH
Confidence 35799999999999999999999999999999999999986211111 0111 1122222334
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCC---cHHHHhhcCeeeccCCchHHHHHHHHh
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQG---TAVAKESSDIIILDDNFATAVTLLNWG 648 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~---~~~a~~~ad~vl~~~~~~~i~~~i~~g 648 (881)
++.+.-..+.+++|||..+|+.+-+.|++- |++. .+ .+.....+|+++.+-..-.+..++..|
T Consensus 228 ~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~ 294 (1057)
T PLN02919 228 AKILGVPTSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIRKDIGNISLSDILTGG 294 (1057)
T ss_pred HHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEECChHHCCHHHHHhcC
Confidence 444444456799999999999999999984 4443 22 223344678887664443444444433
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.14 Score=50.35 Aligned_cols=88 Identities=11% Similarity=0.120 Sum_probs=57.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHH------------HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc---
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIF------------TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA--- 576 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~--- 576 (881)
+-|++.+++++|+++|+++.++|..+.. .+..+.+.+|+... ..+.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~----------------~ii~~~~~~~ 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQ----------------VLAATHAGLY 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEE----------------EEEecCCCCC
Confidence 3489999999999999999999975542 45667788887531 0111111
Q ss_pred -CH--HHHHHHHHHHh--hcCCEEEEEcCCc--------cCHHHHHhCCccE
Q 043535 577 -SP--DDKLAMVKCLK--LKGHVVAVTGNGI--------KDAPALEEANVGL 615 (881)
Q Consensus 577 -~p--~~K~~~v~~l~--~~g~~v~~iGDg~--------ND~~~l~~A~vgI 615 (881)
.| +-=..+.+.+. -..+.++||||.. +|+.+-+.||+-.
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 12 11122333332 1235799999986 6999988888754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.14 Score=45.73 Aligned_cols=89 Identities=22% Similarity=0.239 Sum_probs=55.5
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKA---IATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~---ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
|++.-.+++-|++.++|++|+++|++++++|.....+... -.+++|+.... + .++. |.+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~-~--------------~i~t---s~~ 68 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE-D--------------EIIT---SGM 68 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G-G--------------GEEE---HHH
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc-C--------------EEEC---hHH
Confidence 6677788899999999999999999999999876444333 33678876421 0 1232 211
Q ss_pred HHHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCc
Q 043535 581 KLAMVKCLKL--KGHVVAVTGNGIKDAPALEEANV 613 (881)
Q Consensus 581 K~~~v~~l~~--~g~~v~~iGDg~ND~~~l~~A~v 613 (881)
...+.+++ .+..|.++|.. .....++.+|+
T Consensus 69 --~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 69 --AAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp --HHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred --HHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 22334444 47789998876 55566666653
|
... |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.51 Score=50.09 Aligned_cols=49 Identities=24% Similarity=0.304 Sum_probs=38.5
Q ss_pred eeccccCC----CCccHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCCc
Q 043535 504 GLLGIKDP----CRPGLKKAVEDCQYAGVNIKMITGDNIFT---AKAIATQCGILK 552 (881)
Q Consensus 504 G~i~~~D~----~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~~ 552 (881)
|++.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 45555555 88999999999999999999999976554 555566778754
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.14 Score=56.25 Aligned_cols=91 Identities=8% Similarity=0.034 Sum_probs=68.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ----CGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVK 586 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 586 (881)
++.+++.+++++|+++|+++.++|.-+...+..+.++ +|+.. .+ ......++-|.+.++
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~-~f----------------~~~~~~~~pk~~~i~ 93 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAE-DF----------------DARSINWGPKSESLR 93 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHH-He----------------eEEEEecCchHHHHH
Confidence 4578999999999999999999999999999999888 77653 11 111122334544444
Q ss_pred HHhh----cCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 587 CLKL----KGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 587 ~l~~----~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
...+ ....++|+||...|+.+.+.+...+.+-
T Consensus 94 ~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 94 KIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred HHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 4433 3468999999999999999988887554
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.19 Score=55.44 Aligned_cols=90 Identities=20% Similarity=0.145 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGD---------------NIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR 575 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~ 575 (881)
++.|++.+++++|+++|+++.++|+- ....+..+.+..|+.... .+++-
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~----------------i~i~~ 93 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDE----------------VLICP 93 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceee----------------EEEeC
Confidence 57899999999999999999999983 233455566666664200 01110
Q ss_pred -----c--CHHHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEe
Q 043535 576 -----A--SPDDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 576 -----~--~p~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
. ...-|..++....+. ...+.||||+.+|..+-+.|++-..
T Consensus 94 ~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 94 HFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred CcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 001123334333222 4689999999999999999999643
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.081 Score=55.73 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=48.5
Q ss_pred eccCHHHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhC--------CccEeeCCCCcHHHHhhcCeeeccCCchHH
Q 043535 574 ARASPDDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEA--------NVGLSMGIQGTAVAKESSDIIILDDNFATA 641 (881)
Q Consensus 574 ~~~~p~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A--------~vgIam~~~~~~~a~~~ad~vl~~~~~~~i 641 (881)
.+..+.+|...++.+.+. ...++++||+.||.+|++.+ +.||+|+ .+ ..+..|++++.+ ...+
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~~--~~~v 235 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLTG--PQQV 235 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCCC--HHHH
Confidence 334456898888887665 34789999999999999998 5788885 33 245668998874 5555
Q ss_pred HHHH
Q 043535 642 VTLL 645 (881)
Q Consensus 642 ~~~i 645 (881)
.+.+
T Consensus 236 ~~~L 239 (244)
T TIGR00685 236 LEFL 239 (244)
T ss_pred HHHH
Confidence 5444
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.51 Score=49.87 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=42.3
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCCch
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITG---DNIFTAKAIATQCGILKP 553 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~~~ 553 (881)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 55555677778999999999999999999995 888888888899998653
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.27 Score=48.07 Aligned_cols=86 Identities=15% Similarity=0.145 Sum_probs=66.8
Q ss_pred cCCCCccHHHHHHHHHhCCC--EEEEEcCC-------CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGV--NIKMITGD-------NIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPD 579 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi--~v~~~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 579 (881)
++++.++..+.+++|++.+. +|+++|-. +...|..+.+.+|+.. ..+....|.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv------------------l~h~~kKP~ 118 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV------------------LRHRAKKPG 118 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE------------------EEeCCCCCc
Confidence 56788999999999999987 49999987 4899999999999874 023345787
Q ss_pred HHHHHHHHHhhc-----CCEEEEEcCC-ccCHHHHHhCC
Q 043535 580 DKLAMVKCLKLK-----GHVVAVTGNG-IKDAPALEEAN 612 (881)
Q Consensus 580 ~K~~~v~~l~~~-----g~~v~~iGDg-~ND~~~l~~A~ 612 (881)
-..++.+.++.+ .+.+++|||= ..|+-|=...|
T Consensus 119 ~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 119 CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 677888888765 6689999996 45666544444
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.55 Score=45.26 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=69.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHHc-----CCCchhhhcCCHHHHHHHHhhheeeeccCHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKA---IATQC-----GILKPEFRNYTEEEKMEKVEKIYVMARASPDDK 581 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 581 (881)
|..++++.+..++++++|++++.+|+|+.-.+.. ...+. +++..- -.++++.+...+... +..+-..+.|
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gp-v~~sP~~l~~al~rE-vi~~~p~~fK 103 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGP-VLLSPDSLFSALHRE-VISKDPEEFK 103 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCC-EEECCcchhhhhhcc-ccccChHHHH
Confidence 6899999999999999999999999999665544 33333 443311 111222222222111 3344445689
Q ss_pred HHHHHHHhhc-----CCEEEEEcCCccCHHHHHhCCcc
Q 043535 582 LAMVKCLKLK-----GHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
...++.++.. ...+++.|...+|+.+.+++++-
T Consensus 104 ~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 104 IACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 9999998865 34567789999999999988775
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.49 Score=49.91 Aligned_cols=48 Identities=19% Similarity=0.281 Sum_probs=41.1
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH---cCCC
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ---CGIL 551 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~---~gi~ 551 (881)
|++.-.+.+-|++.+++++|+++|++++++|++...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 66666778899999999999999999999999998877777666 5764
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.25 Score=49.39 Aligned_cols=137 Identities=15% Similarity=0.240 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCC-EEEEEcCCCHHHHH
Q 043535 464 ERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV-NIKMITGDNIFTAK 542 (881)
Q Consensus 464 ~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~~a~ 542 (881)
+...+..+.+.++|.|.--+.. +.=.=|+-|+..++|+.+++.|. .+.++|--|.-...
T Consensus 57 e~M~rv~k~Lheqgv~~~~ik~--------------------~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe 116 (256)
T KOG3120|consen 57 ELMDRVFKELHEQGVRIAEIKQ--------------------VLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIE 116 (256)
T ss_pred HHHHHHHHHHHHcCCCHHHHHH--------------------HHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHH
Confidence 4556677888888876432221 11112678999999999999997 99999999999999
Q ss_pred HHHHHcCCCchhhhc-C-CHHHHHH------HHh-hheeeeccCHH--HHHHHHHHHhhcC-------CEEEEEcCCccC
Q 043535 543 AIATQCGILKPEFRN-Y-TEEEKME------KVE-KIYVMARASPD--DKLAMVKCLKLKG-------HVVAVTGNGIKD 604 (881)
Q Consensus 543 ~ia~~~gi~~~~~~~-~-~~~~~~~------~~~-~~~v~~~~~p~--~K~~~v~~l~~~g-------~~v~~iGDg~ND 604 (881)
.+.+..|+..- +.+ . ++..+++ ... .-.-+.+ .|. =|..++..++..+ +++.++|||.||
T Consensus 117 ~~Lea~~~~d~-F~~IfTNPa~~da~G~L~v~pyH~~hsC~~-CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD 194 (256)
T KOG3120|consen 117 EILEAAGIHDL-FSEIFTNPACVDASGRLLVRPYHTQHSCNL-CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGAND 194 (256)
T ss_pred HHHHHccHHHH-HHHHhcCCcccCCCCcEEeecCCCCCccCc-CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCC
Confidence 99888887541 000 0 0000000 000 0012233 233 3777776665431 278999999999
Q ss_pred -HHHHHhCCccEeeCCCCc
Q 043535 605 -APALEEANVGLSMGIQGT 622 (881)
Q Consensus 605 -~~~l~~A~vgIam~~~~~ 622 (881)
||+++...--+||-..+-
T Consensus 195 ~CP~l~Lr~~D~ampRkgf 213 (256)
T KOG3120|consen 195 FCPVLRLRACDVAMPRKGF 213 (256)
T ss_pred cCcchhcccCceecccCCC
Confidence 567776666667764443
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.16 Score=52.06 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=57.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHH--HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-------ccCHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFT--AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-------RASPDD 580 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-------~~~p~~ 580 (881)
-++.|++.+.+++|+++|+++.++|...... ........++.. .+.. +++ +-.|+-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~-------------~fd~--v~~s~~~~~~KP~p~~ 157 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMA-------------LFDA--VVESCLEGLRKPDPRI 157 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHh-------------hCCE--EEEeeecCCCCCCHHH
Confidence 3578999999999999999999999875432 222222233321 1111 111 112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeC
Q 043535 581 KLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMG 618 (881)
Q Consensus 581 K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 618 (881)
=..+.+.+.-....+++|||...|+.+-+.||+- |.+.
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 2233333333345688899999999999999995 4443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.21 Score=51.68 Aligned_cols=91 Identities=10% Similarity=0.118 Sum_probs=62.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.++.| ++++.++|+.....+...-+..|+.. .++ ...+.+ +-.|+-=..+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~-~F~------------~~v~~~~~~~~~KP~p~~~~~a 151 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLH-YFP------------DKLFSGYDIQRWKPDPALMFHA 151 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHH-hCc------------ceEeeHHhcCCCCCChHHHHHH
Confidence 4568999999998 48999999999888888888888864 111 000111 1122222333
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccEee
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 617 (881)
.+.+.-..+.+++|||+.+|+.+=+.||+.+..
T Consensus 152 ~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 152 AEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 333333345689999999999999999987653
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.42 Score=52.29 Aligned_cols=95 Identities=18% Similarity=0.179 Sum_probs=60.7
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIA---TQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
|++.-.+.+-|++.++|++|+++|++++++|++...+...++ +++|+... .++ ++... .-
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~------~~~---------I~ts~--~~ 99 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT------EEE---------IFSSS--FA 99 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCC------hhh---------EeehH--HH
Confidence 666666788899999999999999999999999966666655 56777531 111 22211 11
Q ss_pred HHHHHHHHhh-cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 581 KLAMVKCLKL-KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 581 K~~~v~~l~~-~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
....++.... .++.|+. ++...|...++.+++-+.
T Consensus 100 ~~~~l~~~~~~~~~~V~v-iG~~~~~~~l~~~Gi~~~ 135 (311)
T PLN02645 100 AAAYLKSINFPKDKKVYV-IGEEGILEELELAGFQYL 135 (311)
T ss_pred HHHHHHhhccCCCCEEEE-EcCHHHHHHHHHCCCEEe
Confidence 1222222211 1345555 455678999998887543
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=91.15 E-value=0.62 Score=46.53 Aligned_cols=87 Identities=11% Similarity=0.129 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-----------ccCHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-----------RASPD 579 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-----------~~~p~ 579 (881)
++.+++.+++++|+ .+++++|+.+...+....+.+|+.. .++. +++ +-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~--------------i~~~~~~~~~~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIED-CFDG--------------IFCFDTANPDYLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHh-hhCe--------------EEEeecccCccCCCCCCHH
Confidence 36789999999998 4789999999999999999999854 1110 221 22222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 580 DKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
-=..+++.+......+++|||...|+.+=+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223444445444677899999999999999988754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.94 E-value=1.7 Score=47.95 Aligned_cols=47 Identities=9% Similarity=0.067 Sum_probs=34.6
Q ss_pred CceeeeeccccC--CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 043535 499 NLILLGLLGIKD--PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIAT 546 (881)
Q Consensus 499 ~l~~lG~i~~~D--~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~ 546 (881)
|.+++-+..--| .+.+++.++|++|. ++..|+++|||+......+..
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 445554333333 35678999999999 457999999999998887754
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.59 Score=47.43 Aligned_cols=91 Identities=5% Similarity=0.079 Sum_probs=57.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ-CGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~ 583 (881)
++.|++.+++++|+++|+++.++|.-+.......... .++.. .... .+.+. -.|+-=..
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~-------------~fd~-v~~s~~~~~~KP~p~~~~~ 149 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRA-------------AADH-IYLSQDLGMRKPEARIYQH 149 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHH-------------hcCE-EEEecccCCCCCCHHHHHH
Confidence 4689999999999999999999999876654433222 12211 1111 11111 11222223
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
+++.+.-..+.++++||...|+.+-+.||+..
T Consensus 150 ~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 150 VLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 33444334567899999999999999999954
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=90.38 E-value=0.96 Score=42.09 Aligned_cols=32 Identities=13% Similarity=0.069 Sum_probs=28.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTA 541 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a 541 (881)
+++.+++.+++++++++|++++++|||+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 66889999999999999999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.27 E-value=1.6 Score=43.39 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=42.6
Q ss_pred eeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCCc
Q 043535 501 ILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIA---TQCGILK 552 (881)
Q Consensus 501 ~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~~ 552 (881)
.+-|.+.++|..-|++.|+++.|++++.+|..+|....++-..+. +++|+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 466999999999999999999999999999999877665555544 4567654
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=89.85 E-value=0.74 Score=46.57 Aligned_cols=93 Identities=12% Similarity=0.042 Sum_probs=55.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHH-Hh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKC-LK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~-l~ 589 (881)
++.|++.+.+++|++.+ +.+++|..+........+.+|+.. .+. ... +..+.++... .|.+++.. ++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~-~f~--------~~f-~~i~~~~~~~-~kp~~~~~a~~ 141 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNA-LFP--------GAF-SEVLMCGHDE-SKEKLFIKAKE 141 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHH-hCC--------Ccc-cEEEEeccCc-ccHHHHHHHHH
Confidence 36899999999999985 566667655444444455565532 000 000 0112222221 13344333 33
Q ss_pred hcC-CEEEEEcCCccCHHHHHhC--CccE
Q 043535 590 LKG-HVVAVTGNGIKDAPALEEA--NVGL 615 (881)
Q Consensus 590 ~~g-~~v~~iGDg~ND~~~l~~A--~vgI 615 (881)
+.| +.+++|||..+|+.+-++| |+-.
T Consensus 142 ~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 142 KYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 333 4688999999999999999 9963
|
2 hypothetical protein; Provisional |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.12 E-value=0.95 Score=45.26 Aligned_cols=91 Identities=15% Similarity=0.171 Sum_probs=59.8
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK 591 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 591 (881)
.|+ .+.++.|++. +++.++||.....+....++.|+... ++.. ..++ . -..+-.|+-=....+.+...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~-fd~i~~~~~-------~-~~~KP~p~~~~~~~~~~~~~ 158 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY-FDAVVAADD-------V-QHHKPAPDTFLRCAQLMGVQ 158 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH-ceEEEehhh-------c-cCCCCChHHHHHHHHHcCCC
Confidence 444 6889999875 89999999999999999999998641 1110 0000 0 01112232233344444433
Q ss_pred CCEEEEEcCCccCHHHHHhCCcc
Q 043535 592 GHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 592 g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
...+++|||..+|+.+-+.||+-
T Consensus 159 ~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 159 PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHeEEEeccHhhHHHHHHCCCE
Confidence 45688999999999999999985
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=88.65 E-value=1.3 Score=46.19 Aligned_cols=59 Identities=17% Similarity=0.161 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHhhcC-------CEEEEEcCCccCHHHHHhC------CccEeeCCCCcHHHHhhcCeeecc
Q 043535 577 SPDDKLAMVKCLKLKG-------HVVAVTGNGIKDAPALEEA------NVGLSMGIQGTAVAKESSDIIILD 635 (881)
Q Consensus 577 ~p~~K~~~v~~l~~~g-------~~v~~iGDg~ND~~~l~~A------~vgIam~~~~~~~a~~~ad~vl~~ 635 (881)
.-..|+..++.+.+.. ..++++||...|-.|++.. +++|-++......-..+|+|-+.+
T Consensus 162 ~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 162 PGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 3345999999887663 2689999999999999763 567777722222334456665543
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=88.50 E-value=3.2 Score=48.21 Aligned_cols=94 Identities=14% Similarity=-0.014 Sum_probs=61.2
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCCch---hhhcCCHHHHHHHHhhheeeec------cCHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ-CGILKP---EFRNYTEEEKMEKVEKIYVMAR------ASPDDK 581 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~---~~~~~~~~~~~~~~~~~~v~~~------~~p~~K 581 (881)
+++++.+ .++++|.+ +++|+-...-+..+|++ +|++.- +++.. .+-..-.+ +.-++|
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~---------~~G~~TG~i~g~~~c~Ge~K 177 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVS---------KSGRATGFMKKPGVLVGDHK 177 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEEC---------cCCEEeeeecCCCCCccHHH
Confidence 5666554 44567754 99999999999999987 898841 11100 00001111 234568
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 582 LAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 582 ~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
.+-++..........+.||+.||.|||+.|+.+.+++
T Consensus 178 v~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~ 214 (497)
T PLN02177 178 RDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVP 214 (497)
T ss_pred HHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeC
Confidence 8777643321122257799999999999999999997
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=88.41 E-value=5.5 Score=42.76 Aligned_cols=92 Identities=17% Similarity=0.208 Sum_probs=57.9
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIF---TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
|++.-.+.+-+++.++|++|+++|++++++|++... ....-.+++|+.... + .++. +..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~------~---------~i~t---s~~ 72 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLA------E---------QLFS---SAL 72 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh------h---------hEec---HHH
Confidence 445556778889999999999999999999997643 333344667875410 0 0221 111
Q ss_pred HHHHHHHHhh---cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 581 KLAMVKCLKL---KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 581 K~~~v~~l~~---~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
-..+.|++ .+..|.++|+. .....++.+++-+.
T Consensus 73 --~~~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 73 --CAARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred --HHHHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 12233444 25689999985 34566777766553
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.83 E-value=0.95 Score=43.60 Aligned_cols=90 Identities=19% Similarity=0.242 Sum_probs=62.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHH----HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHH-HHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFT----AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPD-DKLAMVK 586 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~-~K~~~v~ 586 (881)
+++-+++.|..-++.|=+++.+|||.+.. +..+|+...|... .-.+|+...|. .+..-..
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m---------------~pv~f~Gdk~k~~qy~Kt~ 179 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM---------------NPVIFAGDKPKPGQYTKTQ 179 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC---------------cceeeccCCCCcccccccH
Confidence 56778899999999999999999998643 4445666665431 11245444441 2223345
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHhCCc-cEee
Q 043535 587 CLKLKGHVVAVTGNGIKDAPALEEANV-GLSM 617 (881)
Q Consensus 587 ~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam 617 (881)
.+++++-.+-. ||+.||+.|-++|++ ||-+
T Consensus 180 ~i~~~~~~IhY-GDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 180 WIQDKNIRIHY-GDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred HHHhcCceEEe-cCCchhhhHHHhcCccceeE
Confidence 66777766655 999999999999987 5654
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.87 E-value=3 Score=43.11 Aligned_cols=97 Identities=16% Similarity=0.221 Sum_probs=72.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-CCHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-YTEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
.++.|++.+.+++|++.|+.+.+.|+.....+..+.+..|+... ++. ...++. .-.+-.|+-=....+.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~-f~~~v~~~dv--------~~~KP~Pd~yL~Aa~~L 155 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY-FDVIVTADDV--------ARGKPAPDIYLLAAERL 155 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh-cchhccHHHH--------hcCCCCCHHHHHHHHHc
Confidence 46899999999999999999999999999999999999998762 111 000000 11133455445555666
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
.-....+.++.|+.|.+.+-++||.-+
T Consensus 156 gv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 156 GVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CCChHHeEEEecchhHHHHHHHCCCEE
Confidence 555677889999999999999999864
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=85.58 E-value=0.9 Score=47.24 Aligned_cols=82 Identities=21% Similarity=0.265 Sum_probs=56.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC--------H
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIF---TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS--------P 578 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~--------p 578 (881)
++.-|++.+.++.++++|++|+++|||+.. ....=.++.|+...+ .++.|.. .
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~----------------~l~lr~~~~~~~~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWD----------------HLILRPDKDPSKKSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBS----------------CGEEEEESSTSS----
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccc----------------hhcccccccccccccc
Confidence 466788999999999999999999999744 223334556654310 1222221 2
Q ss_pred HHHHHHHHHHhhcCC-EEEEEcCCccCHHH
Q 043535 579 DDKLAMVKCLKLKGH-VVAVTGNGIKDAPA 607 (881)
Q Consensus 579 ~~K~~~v~~l~~~g~-~v~~iGDg~ND~~~ 607 (881)
+-|..--+.+++.|+ +++.+||..+|..-
T Consensus 178 ~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 348888888888865 56779999999765
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=84.84 E-value=4.2 Score=42.89 Aligned_cols=80 Identities=19% Similarity=0.220 Sum_probs=53.6
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHH----HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC-------
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFT----AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS------- 577 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~------- 577 (881)
+.|.-|++.+..+.+++.|++|+++|||.... ...+ ++.|+...+ .++-|..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~----------------~LiLR~~~D~~~~~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWE----------------KLILKDPQDNSAEN 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcc----------------eeeecCCCCCccch
Confidence 45678899999999999999999999998543 2332 346775310 1333322
Q ss_pred -HHHHHHHHHHHhhcCC-EEEEEcCCccCH
Q 043535 578 -PDDKLAMVKCLKLKGH-VVAVTGNGIKDA 605 (881)
Q Consensus 578 -p~~K~~~v~~l~~~g~-~v~~iGDg~ND~ 605 (881)
.+.|...-+.+.+.|+ +++.+||-.+|.
T Consensus 206 av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 1235555556666666 467799999886
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.60 E-value=2.7 Score=41.64 Aligned_cols=92 Identities=22% Similarity=0.274 Sum_probs=56.3
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCH----HHHHHHHhh------heeeeccCHHH-
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTE----EEKMEKVEK------IYVMARASPDD- 580 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~----~~~~~~~~~------~~v~~~~~p~~- 580 (881)
+.+++.+++.+++++|++++|+|-- -|+....+..-.- +.....+.. ...+|.-.|++
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~ 100 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDN 100 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCC
Confidence 5789999999999999999999852 2232211100000 001111111 11344444442
Q ss_pred -------HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCcc
Q 043535 581 -------KLAMVKCLKLKG---HVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 581 -------K~~~v~~l~~~g---~~v~~iGDg~ND~~~l~~A~vg 614 (881)
..-+.+.+++.+ ....+|||...|+.+-..|+++
T Consensus 101 c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 101 CDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 345556666654 6789999999999998888886
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=84.42 E-value=1.7 Score=46.20 Aligned_cols=41 Identities=7% Similarity=0.086 Sum_probs=38.5
Q ss_pred CC-ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 512 CR-PGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 512 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
+| |++.+++++|+++|+++.++|+.....+....+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999999999999999999985
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=80.36 E-value=4.1 Score=47.63 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=32.8
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCH------------HHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNI------------FTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~------------~~a~~ia~~~gi~ 551 (881)
+-|++.+++++|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998554 3466677777765
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.11 E-value=13 Score=39.58 Aligned_cols=109 Identities=20% Similarity=0.273 Sum_probs=69.5
Q ss_pred eeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc----CCCchhhhcCCHHHHHHHHhhheeeeccCH
Q 043535 503 LGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQC----GILKPEFRNYTEEEKMEKVEKIYVMARASP 578 (881)
Q Consensus 503 lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~----gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p 578 (881)
=|++.-.+.+-|++.++|++|+++|++++++|-....+...+++++ +++.. ++. ++. +
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~------~~~---------i~T---S 77 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVT------PDD---------IVT---S 77 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCC------HHH---------eec---H
Confidence 3788888999999999999999999999999988766666444433 33220 000 121 1
Q ss_pred HHHHHHHHHHhhc--CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCC
Q 043535 579 DDKLAMVKCLKLK--GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDN 637 (881)
Q Consensus 579 ~~K~~~v~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~ 637 (881)
.+ -....++++ +..|.++|.+ .+...++.+|+-+.-..+. ...|+|+...+
T Consensus 78 ~~--at~~~l~~~~~~~kv~viG~~-~l~~~l~~~G~~~~~~~~~-----~~~d~Vv~g~d 130 (269)
T COG0647 78 GD--ATADYLAKQKPGKKVYVIGEE-GLKEELEGAGFELVDEEEP-----ARVDAVVVGLD 130 (269)
T ss_pred HH--HHHHHHHhhCCCCEEEEECCc-chHHHHHhCCcEEeccCCC-----CcccEEEEecC
Confidence 11 122334443 3689999954 6778888888877653222 11677776433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 881 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-54 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-53 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 7e-52 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 8e-49 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-38 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-38 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-38 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 9e-38 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-32 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-14 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 7e-14 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-12 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-12 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 9e-12 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 9e-12 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 1e-11 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 6e-11 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 7e-11 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 2e-10 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 8e-07 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 2e-04 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 2e-04 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 2e-04 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 881 | |||
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-169 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-168 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-149 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-141 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-108 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-46 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-30 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-27 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-27 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-09 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 8e-27 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-25 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-08 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-25 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-08 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 6e-07 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 2e-04 |
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 516 bits (1332), Expect = e-169
Identities = 221/967 (22%), Positives = 381/967 (39%), Gaps = 158/967 (16%)
Query: 36 VATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCA 95
+ TD+ G+ + G N+ PPT + ++L++ A
Sbjct: 56 LHNKYGTDLTRGL--TNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGA 113
Query: 96 ILSL------------AFGLNLFIAVSIYISV--SASSKYMQNKKFEKLLSKVSN--SIQ 139
IL NL++ V + V + Y Q K +++ N Q
Sbjct: 114 ILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQ 173
Query: 140 VDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES---------DHN 190
V+R+ + I VV GD++ +K GD++PAD + H ++ S +
Sbjct: 174 ALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRS 233
Query: 191 VEVNSSQNPF-----LLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245
E SS+NP T V+G R + G T G+I S T +
Sbjct: 234 PEF-SSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIE 292
Query: 246 ----VRKLTSLVDLIGLAITFSGLLMILD-LNAVVNLI------IPEGLPLAVTVTIAYS 294
+ +T + +G++ L++ L AV+ LI +PEGL VTV + +
Sbjct: 293 IEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLT 352
Query: 295 MKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQM---KGAADHSNIAPKVVELIQ 351
KR+ + +V+ L A ET+GS + IC+DKTGTLT N+M D+ E
Sbjct: 353 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQS 412
Query: 352 QGFALNTTAGFYKRTSGSGL--EIELSGSSIEKAILSWPILG-------------MSMDM 396
T+A + + + L IL + G +
Sbjct: 413 GAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV 472
Query: 397 EQIRQSCVILQVEAFNSHRK-QSRVMMRKKADNTVH-VHWKGAAEIILAMCSSYYDASGN 454
+ +R + FNS K Q + +K+ + + + KGA E IL CS+ G
Sbjct: 473 QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLN-GA 531
Query: 455 VKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVP-----------VPEEELNEENLILL 503
+ L+ +E F+ + + L F H +P E +L +
Sbjct: 532 EEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFV 591
Query: 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK----------- 552
GL+ + DP R + AV C+ AG+ + M+TGD+ TAKAIA GI+
Sbjct: 592 GLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAA 651
Query: 553 ---------------------PEFRNYTEEEKMEKVEKI--YVMARASPDDKLAMVKCLK 589
+ ++ + E + + V AR SP KL +V+ +
Sbjct: 652 RLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQ 711
Query: 590 LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGR 649
+G +VAVTG+G+ D+PAL++A++G++MGI G+ V+K+++D+I+LDDNFA+ VT + GR
Sbjct: 712 RQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGR 771
Query: 650 CVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG-KNPLTAVQLLWMNLIVLTLGALALVTE 708
++ N++K I + LT ++ + FL ++ PL V +L ++L + A++L E
Sbjct: 772 LIFDNLKKSIAYTLTSNIPEIT-PFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYE 830
Query: 709 QPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLL-------------FKGES 755
Q ++M++ P + N L++ A+ QI ++ L F
Sbjct: 831 QAESDIMKRQPRNPKTDKLVN---ERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMD 887
Query: 756 VLGVNENVKD---------------------------TMIFNTFVLCQVFNEFNARKLEK 788
++G D T F + V+ Q + + +
Sbjct: 888 LIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICK-TRR 946
Query: 789 KNVFKGIHKNKSFLGIIGITIVLQVVMVEI--LKKFADTEGLNWIQWGSCIGIAAISWPI 846
++F+ KNK + + L + L W + I +
Sbjct: 947 NSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLY 1006
Query: 847 GWFVKCI 853
+ I
Sbjct: 1007 DEMRRFI 1013
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 516 bits (1330), Expect = e-168
Identities = 208/981 (21%), Positives = 371/981 (37%), Gaps = 172/981 (17%)
Query: 36 VATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCA 95
+ QT G+ S A G N + P + +++V A
Sbjct: 61 LEQKYQTSATKGL--SASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAA 118
Query: 96 ILSLAFGL------------NLFIAVSIY--ISVSASSKYMQNKKFEKLLSKVSN--SIQ 139
+ L NL++A+++ + V+ Y Q K +++ N Q
Sbjct: 119 AICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQ 178
Query: 140 VDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES---------DHN 190
V+R+ + QI +VVGD++ +K GD+VPAD L ++ S +
Sbjct: 179 ATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRS 238
Query: 191 VEVNSSQNPF-----LLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245
E + ++P T ++G + L G T G+I S +E T +
Sbjct: 239 PEC-THESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIE 297
Query: 246 ----VRKLTSLVDLIGLAITFSGLLMILD-LNAVVNLI------IPEGLPLAVTVTIAYS 294
V + L L G + + L A+V + +PEGL VTV ++ +
Sbjct: 298 IEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLT 357
Query: 295 MKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQM---KGAADHSNIAPKVVELIQ 351
KRL + +V+ L A ET+GS +VIC+DKTGTLT N+M D+ + E
Sbjct: 358 AKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQS 417
Query: 352 QGFALNTTAGFYKRTSGSGL--EIELSGSSIEKAILSWPILG-------------MSMDM 396
++ + L + ++G +
Sbjct: 418 GQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA 477
Query: 397 EQIRQSCVILQVEAFNSHRK-QSRVM-MRKKADNTVHVHWKGAAEIILAMCSSYYDASGN 454
R+ + FNS K Q + + D + KGA E +L CSS G
Sbjct: 478 MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILI-KGQ 536
Query: 455 VKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVP-----------VPEEELNEENLILL 503
L+ RE F+ + + L F + V L
Sbjct: 537 ELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFA 596
Query: 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP---------- 553
GL+ + DP R + AV C+ AG+ + M+TGD+ TAKAIA GI+
Sbjct: 597 GLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAA 656
Query: 554 ----------------------EFRNYTEEEKMEKVEKI--YVMARASPDDKLAMVKCLK 589
+ ++ E +E + V AR SP KL +V+ +
Sbjct: 657 RLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQ 716
Query: 590 LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGR 649
G +VAVTG+G+ D+PAL++A++G++MGI G+ AK ++D+I+LDDNFA+ VT + GR
Sbjct: 717 RLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGR 776
Query: 650 CVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG-KNPLTAVQLLWMNLIVLTLGALALVTE 708
++ N++K I + LT ++ + +L + V PL + +L++ L +++L E
Sbjct: 777 LIFDNLKKSIAYTLTKNIPELT-PYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYE 835
Query: 709 QPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLL-------------FKGES 755
+ ++M P + N L A +++QI + + +
Sbjct: 836 KAESDIMHLRPRNPKRDRLVN---EPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLL 892
Query: 756 VLGVNENVKD---------------------------TMIFNTFVLCQVFNEFNARKLEK 788
+G+ ++ T+ F + +CQ+ + + +
Sbjct: 893 CVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRK-TRR 951
Query: 789 KNVFK-GIHKNKSFLGIIGITIVLQVVMVEI--LKKFADTEGLNWIQWGSCIGIAAI--- 842
+ F+ G +N+ + I + + + + + + + W + +
Sbjct: 952 LSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFV 1011
Query: 843 ----------SWPIGWFVKCI 853
P W+ + +
Sbjct: 1012 YDEIRKLGVRCCPGSWWDQEL 1032
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 462 bits (1191), Expect = e-149
Identities = 163/885 (18%), Positives = 343/885 (38%), Gaps = 95/885 (10%)
Query: 16 IEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESF 75
+E +K + +DL + V L+ G + ++ R +FG N ++
Sbjct: 4 LEDIKNETVDLEKI--PIEEVFQQLKCSREGL---TTQEGEDRIQIFGPNKLEEKKESKL 58
Query: 76 FSFVVDTFKSFTVLILFVCAILSLAFGLNL--------FIAVSIYISVSASSKYMQ---- 123
F+ + ++ + AI+++A F+ + + ++++ +++
Sbjct: 59 LKFL-GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNA 117
Query: 124 NKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQ 183
L++ ++ + V+R+ + + + +V GD++ +K+GD +PAD L+G L+
Sbjct: 118 GNAAAALMAGLAP--KTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLK 175
Query: 184 IQESDHNVE---VNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWT 240
+ +S E V + SG+ G + A G++T +G+ +T++
Sbjct: 176 VDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQVG 234
Query: 241 LLKARVRK----LTSLVDLIGLAITFSGLLM----ILD--LNAVVNLI--IPEGLPLAVT 288
+ + + + + + D N +V LI IP +P ++
Sbjct: 235 HFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLS 294
Query: 289 VTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQM--KGAADHSNIAPKV 346
VT+A RL A+ ++++A E M V+C+DKTGTLTLN++
Sbjct: 295 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVE 354
Query: 347 VELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVIL 406
+ + A+ + + +I+ A++ GM D ++ R +
Sbjct: 355 KDQVLLFAAMASRVE--------------NQDAIDAAMV-----GMLADPKEARAGIREV 395
Query: 407 QVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERF 466
FN K++ + H KGA E IL + ++
Sbjct: 396 HFLPFNPVDKRTALTYIDG-SGNWHRVSKGAPEQILELA-----------KASNDLSKKV 443
Query: 467 EQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYA 526
II A L+ LA A + VP +E +GLL + DP R + +
Sbjct: 444 LSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNL 503
Query: 527 GVNIKMITGDNIFTAKAIATQCGILK-----------PEFRNYTEEEKMEKVEKIYVMAR 575
GVN+KMITGD + K + G+ + N E +EK A
Sbjct: 504 GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAG 563
Query: 576 ASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILD 635
P+ K +VK L+ + H+V +TG+G+ DAPAL++A++G+++ T A+ +SDI++ +
Sbjct: 564 VFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTE 622
Query: 636 DNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNL 695
+ ++ + R ++ ++ + + ++I++ V F+ L+ + +A +L + +
Sbjct: 623 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG-FMLIALIWEFDFSAFMVLIIAI 681
Query: 696 IVLT-LGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAF----YQIAVLLTLL 750
L + + ++ + P + + + + A
Sbjct: 682 --LNDGTIMTISKDRV--KPSPTPDSWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFF 737
Query: 751 FKGESVLGVNENVKD--TMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGIT 808
V + +N + ++ + F R + F + +
Sbjct: 738 SDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTR--SRSWSFVERPGALLMIAFLIAQ 795
Query: 809 IVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCI 853
++ ++ V +FA G+ W G + +++ K
Sbjct: 796 LIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFA 840
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 442 bits (1138), Expect = e-141
Identities = 162/861 (18%), Positives = 330/861 (38%), Gaps = 84/861 (9%)
Query: 39 ALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILS 98
LQTD G+ + E+ +R+ +G N K+ F F+ F ++ A+L+
Sbjct: 79 MLQTDTRVGL--TSEEVVQRRRKYGLNQMKEEKENHFLKFL-GFFVGPIQFVMEGAAVLA 135
Query: 99 LAFG-LNLFIAVSIYISVSASSKYMQNKK----FEKLLSKVSNSIQVDVVRNKRRQQILL 153
F + + ++A ++Q + ++L ++ + V+R+ ++I
Sbjct: 136 AGLEDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLAL--KAVVLRDGTLKEIEA 193
Query: 154 SNVVVGDVICLKIGDQVPADGIFLDGHS-LQIQESD-----HNVEVNSSQNPFLLSGTKV 207
VV GD++ ++ G +PADG + + LQ+ +S V+ + F + + V
Sbjct: 194 PEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVF--ASSAV 251
Query: 208 VDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSL---VDLIGLAITFSG 264
G ++ TA G NT G+ + + + + ++ + + L I +
Sbjct: 252 KRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVS 311
Query: 265 LLM----ILD--LNAVVNLI--IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGS 316
I+ + I +P GLP VT T+A L A+V+KLSA E++
Sbjct: 312 SFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAG 371
Query: 317 ATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELS 376
++C+DKTGTLT N++ D +A E + L + + +
Sbjct: 372 VEILCSDKTGTLTKNKLS-LHDPYTVAGVDPEDLMLTACLA-----------ASRKKKG- 418
Query: 377 GSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKG 436
+I+KA L L + + +LQ F+ K+ ++ KG
Sbjct: 419 IDAIDKAFLKS--LKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESP-QGERITCVKG 475
Query: 437 AAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELN 496
A +L + + ++ + A + L A K+
Sbjct: 476 APLFVLKTVE-------EDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------- 520
Query: 497 EENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK---- 552
E + +LG++ DP R K V + + G++IKM+TGD + A+ + Q G+
Sbjct: 521 EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYN 580
Query: 553 ------PEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAP 606
+ E + VE A P K +V+ L+ +G++VA+TG+G+ DAP
Sbjct: 581 AERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAP 640
Query: 607 ALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTIS 666
+L++A+ G+++ + A+ ++DI+ L + L R ++ + ++ + + +S
Sbjct: 641 SLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS 699
Query: 667 VSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLT-LGALALVTEQPTKELMEKPPVRLTEP 725
+ +F + + L ++++ + + LA+ + + PV+ P
Sbjct: 700 IHLEIF-LGLWIAILNRSLNIELVVFIAI--FADVATLAIAYD---NAPYSQTPVKWNLP 753
Query: 726 LITNVM-WRNLLAQAFYQIAVLLTLLFKGESVLGVNENVKDTMIFNTFVLCQVFNEFNAR 784
+ + ++ I V + N D ++F L + + F R
Sbjct: 754 KLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITR 813
Query: 785 KLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISW 844
F + G I + +L + + + + + + +
Sbjct: 814 ---ANGPFWSSIPSWQLSGAIFLVDILATCFT--IWGWFEHSDTSIVAVVRIWIFSFGIF 868
Query: 845 PIGWFVKCIPVPAKSLSYLSN 865
I V I + L +
Sbjct: 869 CIMGGVYYILQDSVGFDNLMH 889
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 354 bits (911), Expect = e-108
Identities = 139/542 (25%), Positives = 234/542 (43%), Gaps = 72/542 (13%)
Query: 377 GSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMM--------RKKADN 428
+ + + IRQ F+ RK M +A
Sbjct: 454 NVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRK----SMSVYCSPAKSSRAAV 509
Query: 429 TVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQ--GMAAGSLQCLAFAHK 486
+ KGA E ++ C+ + +E+ +I+ G +L+CLA A +
Sbjct: 510 GNKMFVKGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATR 568
Query: 487 QVPVPEEELN----------EENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGD 536
P EE+ E +L +G++G+ DP R + +++ C+ AG+ + MITGD
Sbjct: 569 DTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGD 628
Query: 537 NIFTAKAIATQCGILKP------------EFRNYTEEEKMEKVEKIYVMARASPDDKLAM 584
N TA AI + GI EF + E+ E + AR P K +
Sbjct: 629 NKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKI 688
Query: 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTL 644
V+ L+ + A+TG+G+ DAPAL++A +G++MG GTAVAK +S++++ DDNF+T V
Sbjct: 689 VEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA 747
Query: 645 LNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALA 704
+ GR +Y N+++FI++ ++ +V V+ FL A L L VQLLW+NL+ L A A
Sbjct: 748 VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATA 807
Query: 705 LVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTL----LFKGESVLGVN 760
L P ++M++PP EPLI+ ++ +A Y A + E GV
Sbjct: 808 LGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVT 867
Query: 761 ENVKD--------------------------TMIFNTFVLCQVFNEFNARKLEKKNVFK- 793
+ TM + V ++ N N+ E +++ +
Sbjct: 868 YHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLS-ENQSLMRM 926
Query: 794 GIHKNKSFLGIIGITIVLQ--VVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVK 851
N LG I +++ L ++ V+ L + L+ QW + I+ + +K
Sbjct: 927 PPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILK 986
Query: 852 CI 853
I
Sbjct: 987 FI 988
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 1e-46
Identities = 81/352 (23%), Positives = 138/352 (39%), Gaps = 56/352 (15%)
Query: 36 VATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCA 95
G+ + + R +G N +S + V++ F+ V IL + A
Sbjct: 13 CLAYFGVSETTGL--TPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAA 70
Query: 96 ILSLAFGLNLFIAVSIYISVSASSK-----------YMQNKKFEKLLS--KVSNSIQVDV 142
+S +I V Q + E + K V
Sbjct: 71 CISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKV 130
Query: 143 VRNKRR--QQILLSNVVVGDVICLKIGDQVPADG--IFLDGHSLQIQES---------DH 189
R R+ Q+I ++V GD++ + +GD+VPAD + + +L++ +S
Sbjct: 131 YRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIK 190
Query: 190 NVEVNSSQNPFL-------LSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLL 242
+ E SGT + G + G++T G+I Q + + T L
Sbjct: 191 HTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPL 250
Query: 243 KARV----RKLTSLVDLIGLAITFSGLLMILD--------------LNAVVNLI---IPE 281
+ ++ +L+ ++ LI +A+ + D V L IPE
Sbjct: 251 QQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPE 310
Query: 282 GLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQM 333
GLP +T +A +R+ +A+VR L + ET+G +VIC+DKTGTLT NQM
Sbjct: 311 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQM 362
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 3e-30
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE 561
+ I D RP LK +E + G+ I +++GD K ++ + I +
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI----------Q 176
Query: 562 EKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG 621
E + SP+DK+ +++ LK G+ V + G+G+ DA AL A+V ++MG G
Sbjct: 177 E---------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NG 226
Query: 622 TAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655
++K +DII++ ++ T + L+ + + I
Sbjct: 227 VDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 112 bits (284), Expect = 1e-27
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 21/154 (13%)
Query: 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE 561
+ G++ + D RP ++A+ + G+ M+TGDN F AK +A + G+ ++
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL---------DD 185
Query: 562 EKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG 621
A P +K VK ++ + +V A+ G+G+ DAPAL +A+VG+++G G
Sbjct: 186 ----------YFAEVLPHEKAEKVKEVQ-QKYVTAMVGDGVNDAPALAQADVGIAIG-AG 233
Query: 622 TAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655
T VA E++DI+++ ++ ++ R Y
Sbjct: 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-27
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 20/133 (15%)
Query: 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE 561
+ LL ++DP + + + + Q +G+ I M+TGD+ TA+A+A GI K
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK--------- 595
Query: 562 EKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG 621
V+A P+DK +V LK KG +VA+ G+G+ DAPAL +A++G++MG G
Sbjct: 596 ----------VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TG 644
Query: 622 TAVAKESSDIIIL 634
T VA ES+ + +L
Sbjct: 645 TDVAIESAGVTLL 657
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 4e-09
Identities = 58/254 (22%), Positives = 97/254 (38%), Gaps = 78/254 (30%)
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES---DHNVEVNSSQN 198
+ + +++ L NV VGD++ ++ G+++P DG +G S + ES + V +
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VDESMVTGEPIPVAKEAS 288
Query: 199 PFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR-----QTSYNTSEWTLLKARVRKLTSLV 253
++ T G M A VG +T +I++ Q S +A +++ L
Sbjct: 289 AKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRS---------RAPIQR---LA 336
Query: 254 DLI---------GLAI-TF---------SGLLMILDLNAVVNLII--PEGLPLAVTVTIA 292
D + +A+ +F L L + AV LII P L LA ++I
Sbjct: 337 DTVSGWFVPAVILVAVLSFIVWALLGPQPALSYGL-IAAVSVLIIACPCALGLATPMSI- 394
Query: 293 YSMKRLMIDHAMV------------RKLSACETMGSATVICTDKTGTLTLNQMKGAADHS 340
MV + A E M + DKTGTLT +G
Sbjct: 395 -----------MVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLT----EG----- 434
Query: 341 NIAPKVVELIQQGF 354
PK+ ++ F
Sbjct: 435 --HPKLTRIVTDDF 446
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 8e-27
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 21/154 (13%)
Query: 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE 561
+ G++ + D + K AV++ + G+ + MITGDN +A+AI+ + + +
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---------DL 204
Query: 562 EKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG 621
V+A P K VK L+ VVA G+GI DAPAL +A++G+++G G
Sbjct: 205 ----------VIAEVLPHQKSEEVKKLQ-AKEVVAFVGDGINDAPALAQADLGIAVG-SG 252
Query: 622 TAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655
+ VA ES DI+++ D+ V + R I
Sbjct: 253 SDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-25
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Query: 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE 561
+ G++ + D + K AV++ + G+ + MITGDN +A+AI+ + +
Sbjct: 448 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------- 498
Query: 562 EKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG 621
V+A P K VK L+ VVA G+GI DAPAL +A++G+++G G
Sbjct: 499 ----------VIAEVLPHQKSEEVKKLQ-AKEVVAFVGDGINDAPALAQADLGIAVG-SG 546
Query: 622 TAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655
+ VA ES DI+++ D+ V + R I
Sbjct: 547 SDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 3e-08
Identities = 49/224 (21%), Positives = 82/224 (36%), Gaps = 58/224 (25%)
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES---DHNVEVNSSQN 198
V+R+ + + + V VGD++ ++ G+++P DG+ ++G S + ES V V S+
Sbjct: 137 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKG 195
Query: 199 PFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR-----QTSYNTSEWTLLKARVRKLTSLV 253
+ T G ++ AT VG T QI++ S K +++L V
Sbjct: 196 DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGS---------KPPIQRLADKV 246
Query: 254 DL------IGLAI-TFSGLLMILD-------LNAVVNLII--PEGLPLAVTVTIAYSMKR 297
+ +AI F I + L++ P LA +
Sbjct: 247 VAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTAL------ 300
Query: 298 LMIDHAMV------------RKLSACETMGSATVICTDKTGTLT 329
V + A E T + DKTGTLT
Sbjct: 301 ------TVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT 338
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 5e-25
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Query: 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE 561
+ G++ + D + K AV++ + G+ + MITGDN +A+AI+ + +
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------- 576
Query: 562 EKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG 621
V+A P K VK L+ VVA G+GI DAPAL +A++G+++G G
Sbjct: 577 ----------VIAEVLPHQKSEEVKKLQ-AKEVVAFVGDGINDAPALAQADLGIAVG-SG 624
Query: 622 TAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655
+ VA ES DI+++ D+ V + R I
Sbjct: 625 SDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 1e-08
Identities = 49/227 (21%), Positives = 83/227 (36%), Gaps = 64/227 (28%)
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES---DHNVEVNSSQN 198
V+R+ + + + V VGD++ ++ G+++P DG+ ++G S + ES V V S+
Sbjct: 215 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKG 273
Query: 199 PFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR-----QTSYNTSEWTLLKARVRKLTSLV 253
+ T G ++ AT VG T QI++ S K +++ L
Sbjct: 274 DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGS---------KPPIQR---LA 321
Query: 254 D---------LIGLAI-TFSGLLMILD-------LNAVVNLII--PEGLPLAVTVTIAYS 294
D ++ +AI F I + L++ P LA +
Sbjct: 322 DKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTAL--- 378
Query: 295 MKRLMIDHAMV------------RKLSACETMGSATVICTDKTGTLT 329
V + A E T + DKTGTLT
Sbjct: 379 ---------TVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT 416
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-15
Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 14/138 (10%)
Query: 380 IEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMM---RKKADNTVHVHWKG 436
++ A+L + + F+ R+ M + + KG
Sbjct: 36 LDTAVLEG---TDEESARSLASRWQKIDEIPFDFERR----RMSVVVAENTEHHQLVCKG 88
Query: 437 AAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELN 496
A + IL +CS G + L+ + +++ + L+ +A A K +P E +
Sbjct: 89 ALQEILNVCSQVRHN-GEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQ 147
Query: 497 ---EENLILLGLLGIKDP 511
E +LIL G + D
Sbjct: 148 RADESDLILEGYIAFLDH 165
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 9e-10
Identities = 49/382 (12%), Positives = 98/382 (25%), Gaps = 128/382 (33%)
Query: 550 ILKPEFR-----NYTEEE-----KMEKVEKIYVMARASPDDKLA---MVKCLKLKGHVVA 596
+ + F ++ E+++ I S D + L K
Sbjct: 24 VFEDAFVDNFDCKDVQDMPKSILSKEEIDHII----MSKDAVSGTLRLFWTLLSKQE--- 76
Query: 597 VTGNGIKDAPALEEA---NVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYV 653
++ +EE N M + + E ++ + L Y
Sbjct: 77 ---EMVQKF--VEEVLRINYKFLM----SPIKTEQRQPSMMTRMYIEQRDRL------YN 121
Query: 654 NIQKFIQFHLT-----ISVSSVLFNFLAA--VLV------GKNPLTA-------VQLL-- 691
+ Q F +++++ + + L A VL+ GK + VQ
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD 181
Query: 692 ----WMNL--------IVLTLGALALVTEQPTKEL---MEKPPVRLTEPLITNVMWRNLL 736
W+NL ++ L L + +R+ + + R LL
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI-HSIQAEL--RRLL 238
Query: 737 AQAFYQIAVLLTLLFKGESVLGVNENVKDTMIFNTFVL-CQVFNEFNARKLEKKNVFKGI 795
Y+ LL L NV++ +N F L C++ +
Sbjct: 239 KSKPYENC-LLVL-----------LNVQNAKAWNAFNLSCKIL------------L---T 271
Query: 796 HKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855
+ K + + + E +K +
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK------------------SLLLKYLDC 313
Query: 856 PAKSLSYLSNEAQFLIISLLIS 877
+ L E +S
Sbjct: 314 RPQD---LPREVL-TTNPRRLS 331
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 4e-09
Identities = 72/483 (14%), Positives = 138/483 (28%), Gaps = 148/483 (30%)
Query: 396 MEQIRQSCVI--LQVEAFNSHRKQ-------------SR---VMMRKKA------DNTVH 431
M I+ + + R + SR + ++A V
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 432 VH-WKGAAEIILAM--CSSY---YDASGNVKHLEVGARERFEQIIQGMAA------GSLQ 479
+ G+ + +A+ C SY + L + E +++ + +
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214
Query: 480 CLAFAHKQVPVPEEELNEENLILL-------GLLGIKDPCRPGLKKAVE-DCQYAGVNIK 531
+ + + + E LL LL + + A C+ I
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK-----IL 269
Query: 532 MITGD-NIFTAKAIATQCGI-LKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589
+ T + + AT I L T +E ++ K L
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS------LLL-----------KYLD 312
Query: 590 LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGR 649
+ +D P E + ++ ES + D AT W
Sbjct: 313 CR----------PQDLP--REVLTTNPRRL---SIIAES-----IRDGLAT------WDN 346
Query: 650 CVYVNIQKFIQFHLTISVS-SVL--------FNFLA----AVLVGKNPLTAVQLLWMNLI 696
+VN K I S +VL F+ L+ + + P + L+W ++I
Sbjct: 347 WKHVNCDKLTT---IIESSLNVLEPAEYRKMFDRLSVFPPSAHI---PTILLSLIWFDVI 400
Query: 697 VLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQI-AVLLTLLFKGES 755
+ +V + L+EK P T I ++ L L K E+
Sbjct: 401 KSD--VMVVVNKLHKYSLVEKQPKEST-----------------ISIPSIYLELKVKLEN 441
Query: 756 VLGVNE------NVKDTMIFNTFVLCQVFNEF---------NARKLEKKNVFKGIHKNKS 800
++ N+ T + + + F N E+ +F+ + +
Sbjct: 442 EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR 501
Query: 801 FLG 803
FL
Sbjct: 502 FLE 504
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 3e-08
Identities = 69/493 (13%), Positives = 133/493 (26%), Gaps = 174/493 (35%)
Query: 454 NVKHLE-----VGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGI 508
+ K ++ + ++E + II L L L
Sbjct: 34 DCKDVQDMPKSILSKEEIDHIIM----------------SKDAVSGT----LRLFWTLLS 73
Query: 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEE-EKM--- 564
K ++K VE+ ++ + F I T+ R Y E+ +++
Sbjct: 74 KQ--EEMVQKFVEE---------VLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 565 -EKVEKIYVMARASPDDKLAMVKCL-KLKGHV-VAVTGNGIKDAPALEEANVGLSMGIQG 621
+ K V +R P KL + L +L+ V + G + G
Sbjct: 123 NQVFAKYNV-SRLQPYLKLR--QALLELRPAKNVLIDG-----------------VLGSG 162
Query: 622 -TAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLV 680
T VA + + + LN C S +VL
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNC--------------NSPETVL--------- 199
Query: 681 GKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAF 740
L Q L I + + + +R+ + + R LL
Sbjct: 200 --EML---QKLLYQ-IDPNWTSRS--------DHSSNIKLRI-HSIQAEL--RRLLKSKP 242
Query: 741 YQIAVLLTLLFKGESVLGVNENVKDTMIFNTFVL-CQ---------VFNEFNA---RKLE 787
Y+ LL L NV++ +N F L C+ V + +A +
Sbjct: 243 YENC-LLVL-----------LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 788 KKNVFKGIHKNKS---FLGIIGITIV-----------LQVVMV-EILKKFADTEGLNWIQ 832
+ + ++ L + ++ ++ E ++ T W
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT----WDN 346
Query: 833 W------------GSCIGIAAIS--------WPIGWFVKCIPVPAKSLSYL----SNEAQ 868
W S + + + F +P LS +
Sbjct: 347 WKHVNCDKLTTIIESS--LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404
Query: 869 FLIISLLISKQLA 881
++++ L L
Sbjct: 405 MVVVNKLHKYSLV 417
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 2e-04
Identities = 53/421 (12%), Positives = 117/421 (27%), Gaps = 128/421 (30%)
Query: 19 VKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSE-EDRARRQGLFGS----NTYKKPPTE 73
+ + D+L F + D + +D + + +
Sbjct: 14 HQYQYKDILSVF----------EDAFVDNFDCKDVQDMPK--SILSKEEIDHIIMSKDAV 61
Query: 74 SFFSFVVDTF--KSFTVLILFVCAILSLAFGLNLFIAVSIYISVSASSKYMQNKKFEKLL 131
S + T K ++ FV +L + + F+ I M + + +
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYK---FLMSPI--KTEQRQPSMMTRMYIEQR 116
Query: 132 SKVSNSIQV----DVVRNKRRQQI---LLS-----NVVV-GDVICLKIGDQVPA------ 172
++ N QV +V R + ++ LL NV++ G + G A
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS---GKTWVALDVCLS 173
Query: 173 --------DGIF-LD-GHS------LQIQES-DHNVEVNSSQNPFLLSGTKVVDGYGRML 215
IF L+ + L++ + + ++ N + S K
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK--------- 224
Query: 216 ATAVGMNTTWGQ-----IMRQTSYNTS---------EWTL----LKARVRKLT---SLVD 254
+ Q +++ Y L ++ T + D
Sbjct: 225 -----LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 255 LIGLAITF--------SGLLM--ILDLNA-VVNLII---PE----GLPLAVTVTIAYSMK 296
+ A T L + L ++ P P +++ IA S++
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIR 338
Query: 297 RLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGA-------ADHSNIAPKVVEL 349
+ K C+ + + + L + + ++I ++ L
Sbjct: 339 D-GLATWDNWKHVNCDKLTTIIESSLNV---LEPAEYRKMFDRLSVFPPSAHIPTILLSL 394
Query: 350 I 350
I
Sbjct: 395 I 395
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 47.8 bits (115), Expect = 6e-07
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES---DHNVEVNSSQN 198
V+R+ + + + V VGD++ ++ G+++P DG+ ++G S + ES V V S+
Sbjct: 16 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKG 74
Query: 199 PFLLSGTKVVDGYGRMLATAVGMNTTWGQIMR 230
+ T G ++ AT VG T QI++
Sbjct: 75 DEVFGATINNTGVLKIRATRVGGETLLAQIVK 106
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 2e-04
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 30/98 (30%)
Query: 149 QQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQESDHNVEVNSSQNPFLLSG---- 204
+Q+ + V GD+I + G + P DG ++GHS + ES L++G
Sbjct: 35 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDES-------------LITGEAMP 80
Query: 205 ------TKVV------DGYGRMLATAVGMNTTWGQIMR 230
+ V+ +G + AT VG +TT QI++
Sbjct: 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVK 118
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 881 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.92 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.93 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.9 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.81 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.8 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.78 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.75 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.42 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.27 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.27 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.24 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.23 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.21 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.17 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.15 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.14 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.13 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.12 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.11 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.1 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.06 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.04 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.03 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.01 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.0 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.94 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.92 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.91 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.91 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.9 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.87 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.84 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.83 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.83 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.79 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.77 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.73 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.7 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.68 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.67 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.66 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.64 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.62 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.58 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.57 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.57 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.56 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.53 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.51 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.46 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.41 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.4 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.4 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.4 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.34 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.34 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.32 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.32 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.27 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.25 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.25 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.22 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.18 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.16 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.13 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.12 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.11 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.11 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.11 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.04 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.03 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.02 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.01 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.01 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.01 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.0 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.99 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.98 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.97 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.95 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.91 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.87 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.87 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.87 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.85 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.85 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.82 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.82 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.81 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.78 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.77 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.74 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.74 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.73 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.73 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.72 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.72 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.7 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.69 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.67 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.66 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.65 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.64 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.62 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.59 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.56 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.44 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.4 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.39 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.38 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.3 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.2 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.1 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.02 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.01 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.01 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.0 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.94 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.82 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.8 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.8 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.78 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.77 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.71 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.56 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.38 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.27 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.03 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.97 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.73 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.68 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.59 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.31 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.29 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.23 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 95.15 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.92 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.93 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 93.7 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 92.69 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 90.64 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 90.46 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 90.17 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 90.06 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 89.75 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 89.02 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 84.27 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 83.87 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 80.46 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 80.25 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 80.21 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-123 Score=1158.00 Aligned_cols=822 Identities=24% Similarity=0.333 Sum_probs=703.2
Q ss_pred HhhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-----
Q 043535 28 QQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG----- 102 (881)
Q Consensus 28 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~----- 102 (881)
++-.+++++++.|++|+++|||++| |++|+++||+|++++++.+++|+.+++||++|++++++++++++++.+
T Consensus 53 ~~~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~ 130 (1034)
T 3ixz_A 53 DHQLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQAS 130 (1034)
T ss_pred hhhCCHHHHHHHhCCCcccCCCHHH--HHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhc
Confidence 4566999999999999999999999 999999999999999988999999999999999999999999987754
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEeCCEEEEEeccccccCcEEEEcCCCeec
Q 043535 103 ---------LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNS--IQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVP 171 (881)
Q Consensus 103 ---------~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~--~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vP 171 (881)
+...++++++++++++.+++||++.++.++++++. .+++|+|||++++|+++||||||||.|++||+||
T Consensus 131 ~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VP 210 (1034)
T 3ixz_A 131 EGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVP 210 (1034)
T ss_pred cCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceec
Confidence 23455666677888889999999988888877653 4899999999999999999999999999999999
Q ss_pred cceeEEeccceeeecC----CccccccC----------CCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCC
Q 043535 172 ADGIFLDGHSLQIQES----DHNVEVNS----------SQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTS 237 (881)
Q Consensus 172 aD~~ll~g~~l~vdes----~~~v~~~~----------~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 237 (881)
|||++++|+++.|||| |+ .|+.+ +.+|++|+||.+.+|+++++|++||.+|.+|++.+.+...+.
T Consensus 211 AD~~ll~~~~l~VdES~LTGES-~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~ 289 (1034)
T 3ixz_A 211 ADIRILQAQGRKVDNSSLTGES-EPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVEN 289 (1034)
T ss_pred CCeEEEEeCCceEEecccCCCC-CCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhccccc
Confidence 9999999998899998 33 44332 235789999999999999999999999999999999988889
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHHHHHHHHhhcccccc
Q 043535 238 EWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVR 306 (881)
Q Consensus 238 ~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 306 (881)
+++|+++.++++...+..++++++++++++++ ++. .++..+|||+||++++++++.++++|+++|++||
T Consensus 290 ~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr 369 (1034)
T 3ixz_A 290 EKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVK 369 (1034)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEec
Confidence 99999999999999998888887777666543 222 2223449999999999999999999999999999
Q ss_pred CchhhhhccceEEEEecCccccccCceEEeecCCC------------------CChHHHHHHHHHhhhccccceeeccCC
Q 043535 307 KLSACETMGSATVICTDKTGTLTLNQMKGAADHSN------------------IAPKVVELIQQGFALNTTAGFYKRTSG 368 (881)
Q Consensus 307 ~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~ 368 (881)
+++++|+||++++||||||||||+|+|++.++... ......+.+...+++|+.+.....+..
T Consensus 370 ~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~ 449 (1034)
T 3ixz_A 370 NLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDA 449 (1034)
T ss_pred ChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCC
Confidence 99999999999999999999999999999875110 011233455666778877655431211
Q ss_pred C-CcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCC--CCeEEEEEeCCHHHHHHhc
Q 043535 369 S-GLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKA--DNTVHVHWKGAAEIILAMC 445 (881)
Q Consensus 369 ~-~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~--~~~~~l~~KGa~e~i~~~c 445 (881)
. .......|||+|.|+++++. ..+.+....++.++++..+||+|+||+|+++++..+ ++++.+++|||||.|+++|
T Consensus 450 ~~~~~~~~~gdp~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c 528 (1034)
T 3ixz_A 450 VPVPKRIVIGDASETALLKFSE-LTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERC 528 (1034)
T ss_pred CcccCceeccCchHHHHHHHHH-HhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHh
Confidence 1 11346789999999999987 667777778888999999999999999988877543 3568999999999999999
Q ss_pred cccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-----------ccccccCceeeeeccccCCCCc
Q 043535 446 SSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-----------EELNEENLILLGLLGIKDPCRP 514 (881)
Q Consensus 446 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-----------~~~~e~~l~~lG~i~~~D~~r~ 514 (881)
+++.. +|...+++++.++.+.+..++++.+|+||+++|||.++..+ .+..|+|++|+|+++++||+|+
T Consensus 529 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~ 607 (1034)
T 3ixz_A 529 SSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRA 607 (1034)
T ss_pred HHhhc-CCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCch
Confidence 98764 67788999999999999999999999999999999886421 1235789999999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------------------------------hhhcCCHHH
Q 043535 515 GLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--------------------------------EFRNYTEEE 562 (881)
Q Consensus 515 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------------------------~~~~~~~~~ 562 (881)
+++++|++|+++||+|+|+|||++.+|.++|+++|+..+ ++..+++++
T Consensus 608 ~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 687 (1034)
T 3ixz_A 608 TVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSE 687 (1034)
T ss_pred hHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHH
Confidence 999999999999999999999999999999999999642 223344556
Q ss_pred HHHHHhhh--eeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH
Q 043535 563 KMEKVEKI--YVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT 640 (881)
Q Consensus 563 ~~~~~~~~--~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 640 (881)
+.+.+.+. .+|+|++|+||.++++.+|+.|+.|+|+|||.||++||+.||+|||||.+|++.+|++||+|+.++++++
T Consensus 688 l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~g 767 (1034)
T 3ixz_A 688 LVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFAS 767 (1034)
T ss_pred HHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchH
Confidence 66665554 4999999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCC
Q 043535 641 AVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPV 720 (881)
Q Consensus 641 i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~ 720 (881)
++.++++||++|+|+++++.|.+++|+..+++.+++.+++.+.|++++|++|+|+++|.+|+++|++|+|++++|++||+
T Consensus 768 I~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr 847 (1034)
T 3ixz_A 768 IVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPR 847 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCccHHHHHHHH-HHHHHHHHHHHHHHHhhcc---c-----cCCC---------------------------ccc
Q 043535 721 RL-TEPLITNVMWRNLL-AQAFYQIAVLLTLLFKGES---V-----LGVN---------------------------ENV 763 (881)
Q Consensus 721 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~-----~~~~---------------------------~~~ 763 (881)
++ +++++++.++...+ ..++++++..+..+++... + ++.. ...
T Consensus 848 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (1034)
T 3ixz_A 848 NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYT 927 (1034)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 87 68899988776544 3466665544444332110 0 0100 012
Q ss_pred chhHHHHHHHHHHHHhhHhhhccccccccc-cCcchHHHHHHHHHHHHHHHHH--HHHhhhhhcCCCCChhhHHHHHHHH
Q 043535 764 KDTMIFNTFVLCQVFNEFNARKLEKKNVFK-GIHKNKSFLGIIGITIVLQVVM--VEILKKFADTEGLNWIQWGSCIGIA 840 (881)
Q Consensus 764 ~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~~~~~~~~~ 840 (881)
++|++|.+++++|+++.+++|+. +.++|+ ++|+|+++++++++++++++++ +|+++.+|++.|+++.+|+++++++
T Consensus 928 ~~t~~f~~lv~~q~~~~~~~r~~-~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~ 1006 (1034)
T 3ixz_A 928 CYTVFFISIEMCQIADVLIRKTR-RLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFG 1006 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhhccC-CCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHH
Confidence 68999999999999999999984 456665 8899999999998888887654 5778999999999999999999999
Q ss_pred HHHHHHHHHHHhccc
Q 043535 841 AISWPIGWFVKCIPV 855 (881)
Q Consensus 841 ~~~~~~~~l~k~~~~ 855 (881)
++.+++.++.|++.|
T Consensus 1007 ~~~~~~~e~~K~~~r 1021 (1034)
T 3ixz_A 1007 LLIFVYDEIRKLGVR 1021 (1034)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999876
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-121 Score=1138.67 Aligned_cols=821 Identities=25% Similarity=0.320 Sum_probs=699.3
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH------
Q 043535 29 QFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG------ 102 (881)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~------ 102 (881)
+..+++++++.|++|+.+|||++| +++|+++||+|+++.++.+++|..+++||++|++++++++++++++.+
T Consensus 49 ~~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 126 (1028)
T 2zxe_A 49 HKLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAAT 126 (1028)
T ss_dssp SSSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhCCHHHHHHHhCcCccCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhccc
Confidence 356999999999999999999988 999999999999999888999999999999999999999999988763
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeecc
Q 043535 103 --------LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPA 172 (881)
Q Consensus 103 --------~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPa 172 (881)
+...++++++++++++.+++|+++.++.++++.+ +.+++|+|||++++|+++||||||+|.|++||+|||
T Consensus 127 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 206 (1028)
T 2zxe_A 127 EDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPA 206 (1028)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeec
Confidence 2345566677888888999998876666666543 458999999999999999999999999999999999
Q ss_pred ceeEEeccceeeecC----CccccccCCC----------CceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCc
Q 043535 173 DGIFLDGHSLQIQES----DHNVEVNSSQ----------NPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSE 238 (881)
Q Consensus 173 D~~ll~g~~l~vdes----~~~v~~~~~~----------~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 238 (881)
||++++|+++.|||| |+ .|+.+.. .|++|+||.+.+|+++++|++||.+|.+|++.+++...+.+
T Consensus 207 D~~ll~g~~~~VdeS~LTGES-~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 285 (1028)
T 2zxe_A 207 DLRIISAHGCKVDNSSLTGES-EPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVG 285 (1028)
T ss_dssp EEEEEEEEEEEEECHHHHSCC-SCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCC
T ss_pred eEEEEeeCcEEEEcCccCCCC-cceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCC
Confidence 999999988899998 33 4444333 35799999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHHHHHHHHhhccccccC
Q 043535 239 WTLLKARVRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRK 307 (881)
Q Consensus 239 ~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~ 307 (881)
++|+++.++++..+++.++++++++++++++ ++. .++.++|||+||++++++++.++.+|+++|++||+
T Consensus 286 ~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~ 365 (1028)
T 2zxe_A 286 RTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKN 365 (1028)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESS
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceecc
Confidence 9999999999999999998888877776643 222 22344499999999999999999999999999999
Q ss_pred chhhhhccceEEEEecCccccccCceEEeecCCC------------------CChHHHHHHHHHhhhccccceeeccCCC
Q 043535 308 LSACETMGSATVICTDKTGTLTLNQMKGAADHSN------------------IAPKVVELIQQGFALNTTAGFYKRTSGS 369 (881)
Q Consensus 308 ~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 369 (881)
++++|+||++|+||||||||||+|+|++.++... ..+...+.+..+.++|+++......+++
T Consensus 366 ~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~h 445 (1028)
T 2zxe_A 366 LEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNV 445 (1028)
T ss_dssp TTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTS
T ss_pred chHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCC
Confidence 9999999999999999999999999999875210 0122334556677788776654212222
Q ss_pred Cc-ceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCC--CCeEEEEEeCCHHHHHHhcc
Q 043535 370 GL-EIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKA--DNTVHVHWKGAAEIILAMCS 446 (881)
Q Consensus 370 ~~-~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~--~~~~~l~~KGa~e~i~~~c~ 446 (881)
.. ..+..|||+|.|+++++. ..+.+....+..+++++.+||+|+||||+++++..+ ++++++++|||||.|+++|+
T Consensus 446 p~~~~~~~gdp~E~Al~~~a~-~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~ 524 (1028)
T 2zxe_A 446 PILKRSVAGDASESALLKCIE-LCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCS 524 (1028)
T ss_dssp CGGGSCEESCHHHHHHHHHHH-HHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEE
T ss_pred ccccceeCCCchHHHHHHHHH-HhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhh
Confidence 11 235689999999999887 444556666778999999999999999999998742 44588999999999999999
Q ss_pred ccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-----------ccccccCceeeeeccccCCCCcc
Q 043535 447 SYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-----------EELNEENLILLGLLGIKDPCRPG 515 (881)
Q Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-----------~~~~e~~l~~lG~i~~~D~~r~~ 515 (881)
+... +|...+++++.++.+.+..++++++|+||+++|||+++..+ .+..|+|++|+|+++++|++||+
T Consensus 525 ~~~~-~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~ 603 (1028)
T 2zxe_A 525 TILL-NGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAA 603 (1028)
T ss_dssp EECB-TTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTT
T ss_pred hhhc-CCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChh
Confidence 7653 67778899999999999999999999999999999885421 12347899999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------------------------------hhhcCCHHHH
Q 043535 516 LKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--------------------------------EFRNYTEEEK 563 (881)
Q Consensus 516 ~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------------------------~~~~~~~~~~ 563 (881)
++++|++|+++||+++|+|||++.+|.++|+++|+... ++..+.++++
T Consensus 604 ~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l 683 (1028)
T 2zxe_A 604 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVL 683 (1028)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHH
Confidence 99999999999999999999999999999999999742 2344566777
Q ss_pred HHHHhhhe--eeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHH
Q 043535 564 MEKVEKIY--VMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATA 641 (881)
Q Consensus 564 ~~~~~~~~--v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i 641 (881)
.+.+.++. +|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||+|||||.+|++.++++||+++.+++++++
T Consensus 684 ~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I 763 (1028)
T 2zxe_A 684 DDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASI 763 (1028)
T ss_dssp HHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHH
T ss_pred HHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHH
Confidence 77776664 9999999999999999999999999999999999999999999999967999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCC
Q 043535 642 VTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVR 721 (881)
Q Consensus 642 ~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~ 721 (881)
.+++++||++|.|+++++.|.+++|+..++..+++.++..+.|++++|++|+|++++.+|++++++|+|++++|++||++
T Consensus 764 ~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~ 843 (1028)
T 2zxe_A 764 VTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRN 843 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCC
Confidence 99999999999999999999999999999999988888889999999999999999999999999999999999999998
Q ss_pred CCC-CCccHHHHHH-HHHHHHHHHHHHHHHHHhhc---c------------ccCCC--------------------cccc
Q 043535 722 LTE-PLITNVMWRN-LLAQAFYQIAVLLTLLFKGE---S------------VLGVN--------------------ENVK 764 (881)
Q Consensus 722 ~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~------------~~~~~--------------------~~~~ 764 (881)
++. +++++.++.. ++..++++++..++.+++.. . |++.. ...+
T Consensus 844 ~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1028)
T 2zxe_A 844 PKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTC 923 (1028)
T ss_dssp TTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHH
Confidence 766 9999988766 44567777665554433211 0 11100 0146
Q ss_pred hhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHHH--HHhhhhhcCCCCChhhHHHHHHHHHH
Q 043535 765 DTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMV--EILKKFADTEGLNWIQWGSCIGIAAI 842 (881)
Q Consensus 765 ~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~~~~~~~~~~~ 842 (881)
+|++|.+++++|+++.+++|+. +.++|+..++|++++++++++++++++++ |+++.+|++.|+++.+|++++++++.
T Consensus 924 ~T~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~ 1002 (1028)
T 2zxe_A 924 HTSFFISIVVVQWADLIICKTR-RNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLI 1002 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCS-SSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 8999999999999999999984 45666644899999988888888877665 56799999999999999999999999
Q ss_pred HHHHHHHHHhccc
Q 043535 843 SWPIGWFVKCIPV 855 (881)
Q Consensus 843 ~~~~~~l~k~~~~ 855 (881)
.+++.++.|++.|
T Consensus 1003 ~~~~~e~~k~~~r 1015 (1028)
T 2zxe_A 1003 IFLYDEMRRFIIR 1015 (1028)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998855
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-118 Score=1115.22 Aligned_cols=819 Identities=27% Similarity=0.379 Sum_probs=690.9
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH------
Q 043535 29 QFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG------ 102 (881)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~------ 102 (881)
+-.+++++++.|++|..+|||++| +++|+++||+|+++.++++++|+.+++||+++++++++++++++++.+
T Consensus 6 ~~~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 6 HSKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp GGSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhCCHHHHHHHhCCCcccCCCHHH--HHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 456899999999999999999988 999999999999999888999999999999999999999999998874
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCE--EEEEeccccccCcEEEEcCCCeeccc
Q 043535 103 -----LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKR--RQQILLSNVVVGDVICLKIGDQVPAD 173 (881)
Q Consensus 103 -----~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~--~~~I~~~~Lv~GDII~l~~G~~vPaD 173 (881)
+...++++++++++++.+++++++.++.++++.+ +.+++|+|||+ .++|+++||+|||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 2223444445556666677777765555665543 45899999988 69999999999999999999999999
Q ss_pred eeEEe--ccceeeecC----CccccccCCC-------------CceeecccEEeeCceeEEEEEEeccchhhHHHhhhcc
Q 043535 174 GIFLD--GHSLQIQES----DHNVEVNSSQ-------------NPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSY 234 (881)
Q Consensus 174 ~~ll~--g~~l~vdes----~~~v~~~~~~-------------~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 234 (881)
|++++ +..+.|||| |+ .|+.+.. +|.+|+||.+.+|+++++|++||.+|.+|++.+.+.+
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES-~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGES-VSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCC-SCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred EEEEEEeeceEEEEcccccCCC-cceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 99965 456799998 33 4443323 3799999999999999999999999999999999999
Q ss_pred CCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hH-----------HHHHHhhccccchHHHHHHHHH
Q 043535 235 NTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----------DL-----------NAVVNLIIPEGLPLAVTVTIAY 293 (881)
Q Consensus 235 ~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----------~~-----------~~~l~i~iP~~L~~~~~~~~~~ 293 (881)
.+.+++|+++.+++++.++.++.+++++++++++. ++ ..+++++|||+||++++++++.
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~ 322 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLAL 322 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 89999999999999999999888888877776532 01 1122345999999999999999
Q ss_pred HHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCC-------------------CCh----------
Q 043535 294 SMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSN-------------------IAP---------- 344 (881)
Q Consensus 294 ~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~-------------------~~~---------- 344 (881)
++.+|+++|+++|+++++|+||++|+||||||||||+|+|++.++... .++
T Consensus 323 ~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 402 (995)
T 3ar4_A 323 GTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKP 402 (995)
T ss_dssp HHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEE
T ss_pred HHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccccccc
Confidence 999999999999999999999999999999999999999998765210 000
Q ss_pred ------HHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCC-Ch--h-------------hhhhc
Q 043535 345 ------KVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSM-DM--E-------------QIRQS 402 (881)
Q Consensus 345 ------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~-~~--~-------------~~~~~ 402 (881)
.....+....++|+++.+...+.+ ...+..|||+|.|+++++. +.|. +. . ..++.
T Consensus 403 ~~~~~~~~~~~l~~~~alc~~~~~~~~~~~--~~~~~~g~p~E~Al~~~a~-~~g~~~~~~~~i~~~~~~~~~~~~~~~~ 479 (995)
T 3ar4_A 403 IRSGQFDGLVELATICALCNDSSLDFNETK--GVYEKVGEATETALTTLVE-KMNVFNTEVRNLSKVERANACNSVIRQL 479 (995)
T ss_dssp CCGGGCHHHHHHHHHHHHSCCCEEEEETTT--TEEEEESCHHHHHHHHHHH-HHCTTCCCCTTSCTTTSTTHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHcCCCcccccCCC--CceeecCCccHHHHHHHHH-HcCCccccccccccccccccchhhhhhh
Confidence 123344556677877655432222 2445679999999998775 4443 11 0 23567
Q ss_pred ceEEEEecCCCCCceEEEEEeeCCCC----eEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHH--Hhc
Q 043535 403 CVILQVEAFNSHRKQSRVMMRKKADN----TVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGM--AAG 476 (881)
Q Consensus 403 ~~~~~~~~F~s~~k~~sviv~~~~~~----~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~ 476 (881)
+++++.+||+|+||||+++++..+++ ++.+|+|||||.|+++|++... ++...+++++.++.+.+..+++ +++
T Consensus 480 ~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~ 558 (995)
T 3ar4_A 480 MKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRD 558 (995)
T ss_dssp EEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHSTT
T ss_pred CceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHHHHHHHHHHHhhhc
Confidence 89999999999999999999876551 4789999999999999987665 4466788888899999999999 999
Q ss_pred chhhhhhhhccCCCCc----------ccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 043535 477 SLQCLAFAHKQVPVPE----------EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIAT 546 (881)
Q Consensus 477 g~rvl~~a~k~l~~~~----------~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~ 546 (881)
|+||+++|||+++..+ .+..|+|++|+|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+
T Consensus 559 GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~ 638 (995)
T 3ar4_A 559 TLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR 638 (995)
T ss_dssp CCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred cceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHH
Confidence 9999999999886422 234578999999999999999999999999999999999999999999999999
Q ss_pred HcCCCch------------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 547 QCGILKP------------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 547 ~~gi~~~------------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
++|+... +++.++++++.+.+.+..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||+|
T Consensus 639 ~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advg 718 (995)
T 3ar4_A 639 RIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIG 718 (995)
T ss_dssp HHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEE
T ss_pred HcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeE
Confidence 9999752 4556778888888888999999999999999999999999999999999999999999999
Q ss_pred EeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 043535 615 LSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMN 694 (881)
Q Consensus 615 Iam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~ 694 (881)
|||| +|++.++++||+++.++++.++.+++++||++|+|+++++.|.+++|+..++..+++.+++.+.|++++|++|+|
T Consensus 719 iamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~n 797 (995)
T 3ar4_A 719 IAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVN 797 (995)
T ss_dssp EEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHH
T ss_pred EEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999888988888888999999999999
Q ss_pred HHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHh-hccc--------cCC------
Q 043535 695 LIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFK-GESV--------LGV------ 759 (881)
Q Consensus 695 ~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~------ 759 (881)
+++|.+|++++++++|++++|++||+.++++++++.++..++..++++++..+..+++ .... ...
T Consensus 798 l~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (995)
T 3ar4_A 798 LVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQC 877 (995)
T ss_dssp HTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSC
T ss_pred HHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccc
Confidence 9999999999999999999999999999999999999999998999887665432211 1100 000
Q ss_pred ---------------CcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHH--HHHhhhh
Q 043535 760 ---------------NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEILKKF 822 (881)
Q Consensus 760 ---------------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~ 822 (881)
....++|++|++++++|+++.+++|+.+...+..++|+|+++++++++++++++++ +|+++.+
T Consensus 878 ~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~ 957 (995)
T 3ar4_A 878 TEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMI 957 (995)
T ss_dssp SSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHH
T ss_pred ccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 01246899999999999999999998554444458889999988888777766544 4678999
Q ss_pred hcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 823 ADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 823 f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
|++.|+++.+|+++++++++.+++.+++|++.|
T Consensus 958 f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r 990 (995)
T 3ar4_A 958 FKLKALDLTQWLMVLKISLPVIGLDEILKFIAR 990 (995)
T ss_dssp TTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999998865
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-111 Score=1025.07 Aligned_cols=780 Identities=20% Similarity=0.281 Sum_probs=634.5
Q ss_pred CCHHH-HHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHHH
Q 043535 31 GGTGA-VATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG-LNLFIA 108 (881)
Q Consensus 31 ~~~~~-~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~-~~~~~~ 108 (881)
++++. +.+.|++|..+|||++| +++|+++||+|+++.++ .++|..|+++|++|++++++++++++++.+ +....+
T Consensus 70 ~~~~~~~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g~~~~~~~ 146 (920)
T 1mhs_A 70 GGGRVVPEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLEDWVDFGV 146 (920)
T ss_dssp HHHSCCSSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCSCSSHHHH
T ss_pred CccchhHHHHhCCCcCCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 44444 45568999889999988 99999999999999764 667888899999999999999999988776 333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccc-eeee
Q 043535 109 VSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHS-LQIQ 185 (881)
Q Consensus 109 i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~-l~vd 185 (881)
++++++++++.+++++++.++.++++++ ..+++|+|||++++|+++||||||+|.|++||+|||||++++|++ +.+|
T Consensus 147 i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VD 226 (920)
T 1mhs_A 147 ICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVD 226 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeee
Confidence 4455667777888888888887887765 358999999999999999999999999999999999999999996 8999
Q ss_pred cC----CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHH
Q 043535 186 ES----DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAIT 261 (881)
Q Consensus 186 es----~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~ 261 (881)
|| |+ .|+.+..++.+|+||.+.+|+++++|++||.+|.+|++.+.+...+.+++|+++.++++..++.+++++++
T Consensus 227 ES~LTGES-~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~ 305 (920)
T 1mhs_A 227 QSALTGES-LAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTL 305 (920)
T ss_dssp CTTTSSCC-CCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCC-cceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 98 44 77777789999999999999999999999999999999999988888899999999999999888887777
Q ss_pred HHHHHHHh----hHH-------HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCcccccc
Q 043535 262 FSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTL 330 (881)
Q Consensus 262 ~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~ 330 (881)
+++++.++ ++. .++.++|||+||++++++++.++.+|+++|+++|+++++|+||++|+||||||||||+
T Consensus 306 ~i~~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~ 385 (920)
T 1mhs_A 306 LIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTK 385 (920)
T ss_dssp HHHHHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBS
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccc
Confidence 76665543 222 2224459999999999999999999999999999999999999999999999999999
Q ss_pred CceEEeecCCC--CChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEE
Q 043535 331 NQMKGAADHSN--IAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQV 408 (881)
Q Consensus 331 ~~m~v~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~ 408 (881)
|+|++.++... .+++ +.+ ...++|+.. .+. .+||+|.|+++++. +.+.. ......+++++.
T Consensus 386 n~m~v~~~~~~~g~~~~--~ll-~~a~l~~~~-----~~~-------~~~P~e~Al~~~~~-~~~~~-~~~~~~~~~~~~ 448 (920)
T 1mhs_A 386 NKLSLHDPYTVAGVDPE--DLM-LTACLAASR-----KKK-------GIDAIDKAFLKSLK-YYPRA-KSVLSKYKVLQF 448 (920)
T ss_dssp SCSCCCCCBCCSCCCCT--HHH-HHHHHSCCC-----SSC-------SCCSHHHHHHHHHH-HSSSC-CGGGSCCCEEEE
T ss_pred cceeEEEEeecCCCCHH--HHH-HHHHHhcCC-----ccc-------CCChHHHHHHHHHH-hcccc-hhhccccceeEE
Confidence 99999886321 2221 222 233444321 111 14899999999765 33321 123456889999
Q ss_pred ecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccC
Q 043535 409 EAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQV 488 (881)
Q Consensus 409 ~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l 488 (881)
+||+|.+|+|+++++..+++ .++++|||||.|+++|+.. .+++++.++.+.+..++++.+|+|++++|+|.
T Consensus 449 ~pF~s~~k~ms~iv~~~~g~-~~~~~KGape~il~~c~~~-------~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~- 519 (920)
T 1mhs_A 449 HPFDPVSKKVVAVVESPQGE-RITCVKGAPLFVLKTVEED-------HPIPEEVDQAYKNKVAEFATRGFRSLGVARKR- 519 (920)
T ss_dssp EEEETTTTEEEEEECCSSSS-CEEEEEECHHHHHHHCCCS-------SCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-
T ss_pred eeccCCCCeEEEEEEeCCCc-EEEEEeCCHHHHHHhcccc-------CCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec-
Confidence 99999999999999865554 6788999999999999741 24677778889999999999999999999984
Q ss_pred CCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh----------hhcC
Q 043535 489 PVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE----------FRNY 558 (881)
Q Consensus 489 ~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~----------~~~~ 558 (881)
.|++++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++|+.... -+.+
T Consensus 520 -------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~ 592 (920)
T 1mhs_A 520 -------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDM 592 (920)
T ss_dssp -------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCG
T ss_pred -------cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccC
Confidence 25789999999999999999999999999999999999999999999999999996310 1234
Q ss_pred CHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCc
Q 043535 559 TEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNF 638 (881)
Q Consensus 559 ~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~ 638 (881)
+++++.+.+++..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||+||||+ +|++.++++||+++.++++
T Consensus 593 ~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~ 671 (920)
T 1mhs_A 593 PGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGL 671 (920)
T ss_dssp GGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCS
T ss_pred CHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCH
Confidence 556677777788899999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccC
Q 043535 639 ATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKP 718 (881)
Q Consensus 639 ~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~ 718 (881)
+++.+++++||++|+|+++++.|.++.|+....+..+...+.+ .|+++.|++|+|++.+. |++++++++++.+ +|
T Consensus 672 ~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~-~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~ 746 (920)
T 1mhs_A 672 GAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILN-RSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QT 746 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS-CCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cC
Confidence 9999999999999999999999999999987544444333333 34899999999999997 8999999988664 67
Q ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccC--CCcccchhHHHHHHHHHHHHhhHhhhccccccccc
Q 043535 719 PVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGES---VLG--VNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFK 793 (881)
Q Consensus 719 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~ 793 (881)
|++++.+- ++..++..+++.+...+..++.... ..+ .+....+|++|.+++++|+++.+++|+.+ ++|+
T Consensus 747 P~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~--~~~~ 820 (920)
T 1mhs_A 747 PVKWNLPK----LWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANG--PFWS 820 (920)
T ss_dssp CCCCCSSS----CSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSS--SCSC
T ss_pred CCCchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccch--hhhc
Confidence 76655431 1222223344444333222221111 011 12346789999999999999999999843 3666
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcccCCccccc
Q 043535 794 GIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLSY 862 (881)
Q Consensus 794 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~~~~~~~~ 862 (881)
+. .|++++.++++.+++++.+.+ ++ +|.+.|++|.+|+.+++++++.+++.++.|++-++..+|..
T Consensus 821 ~~-~~~~~~~~~~~~~~~~~~~~~-~~-~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~fd~ 886 (920)
T 1mhs_A 821 SI-PSWQLSGAIFLVDILATCFTI-WG-WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSVGFDN 886 (920)
T ss_dssp CS-CTHHHHHHHHHHHHHHHHHHS-SS-STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCCCTTHH
T ss_pred Cc-hHHHHHHHHHHHHHHHHHHHH-hh-hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 54 778777777766666665543 33 89999999999999999999999999999999887776643
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-110 Score=1014.22 Aligned_cols=776 Identities=20% Similarity=0.293 Sum_probs=600.7
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH------
Q 043535 29 QFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG------ 102 (881)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~------ 102 (881)
+-.+.+++++.|+++ .+|||++| +++|+++||+|+++.++ +++|..|+++|++|++++++++++++++.+
T Consensus 15 ~~~~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~ 90 (885)
T 3b8c_A 15 EKIPIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRP 90 (885)
T ss_dssp SSSSTTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSC
T ss_pred HhCCHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 345889999999998 68999988 99999999999999876 667778889999999999999999998765
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEe
Q 043535 103 --LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLD 178 (881)
Q Consensus 103 --~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~ 178 (881)
+...+.+++++++++..+++++++.++.++++.+ +.+++|+|||++++|+++||+|||+|.|++||+|||||++++
T Consensus 91 ~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~ 170 (885)
T 3b8c_A 91 PDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLE 170 (885)
T ss_dssp SCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEE
Confidence 3223344445556666777787777766776643 458899999999999999999999999999999999999999
Q ss_pred ccceeeecC----CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHH
Q 043535 179 GHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVD 254 (881)
Q Consensus 179 g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 254 (881)
|+++.|||| |+ .|+.+..++.+|+||.+.+|+++++|++||.+|.+|++.+.+.. ..+++|+++.++++..++.
T Consensus 171 g~~l~VdES~LTGES-~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~ 248 (885)
T 3b8c_A 171 GDPLKVDQSALTGES-LPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCI 248 (885)
T ss_dssp SSCBCCCCCSTTCCS-SCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHH
T ss_pred cCcccccccccCCCC-cceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHH
Confidence 998899998 44 77777789999999999999999999999999999999988866 5788999999999987743
Q ss_pred H-HHHHHHHHHHHHHh----h----HH---HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEe
Q 043535 255 L-IGLAITFSGLLMIL----D----LN---AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICT 322 (881)
Q Consensus 255 ~-i~l~~~~~~~~~~~----~----~~---~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~ 322 (881)
. +.+++++++++.++ + +. .++.++|||+||++++++++.++.+|+++|+++|+++++|+||++|+|||
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~ 328 (885)
T 3b8c_A 249 CSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 328 (885)
T ss_dssp HHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEE
Confidence 3 33333333332221 1 11 22234499999999999999999999999999999999999999999999
Q ss_pred cCccccccCceEEeecC-C-C-CChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhh
Q 043535 323 DKTGTLTLNQMKGAADH-S-N-IAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQI 399 (881)
Q Consensus 323 DKTGTLT~~~m~v~~~~-~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~ 399 (881)
|||||||+|+|++.+.. . . ...+..+.+ ...++|+.. ..+||+|.|+++++. + ....
T Consensus 329 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll-~~aa~~~~~--------------~~~~p~~~Al~~~~~-~----~~~~ 388 (885)
T 3b8c_A 329 DKTGTLTLNKLSVDKNLVEVFCKGVEKDQVL-LFAAMASRV--------------ENQDAIDAAMVGMLA-D----PKEA 388 (885)
T ss_dssp ECCCCCSCCCCCCCSCCCCSSCSSTTHHHHH-HHHHHHCCS--------------SSCCSHHHHHHHTTC-C----TTCC
T ss_pred CCCCCcccCceEEEEEEEeccCCCCCHHHHH-HHHHHHhCC--------------CCCCchHHHHHHHhh-c----hhhH
Confidence 99999999999997432 1 1 111122223 233344321 146899999999765 2 1123
Q ss_pred hhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchh
Q 043535 400 RQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQ 479 (881)
Q Consensus 400 ~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~r 479 (881)
+..++.++.+||+|.+|+|+++++..++ +.++++|||||.++++|+.. +..++.+.+..++++++|+|
T Consensus 389 ~~~~~~~~~~pF~s~~k~~sv~~~~~~g-~~~~~~KGa~e~il~~c~~~-----------~~~~~~~~~~~~~~a~~G~r 456 (885)
T 3b8c_A 389 RAGIREVHFLPFNPVDKRTALTYIDGSG-NWHRVSKGAPEQILELAKAS-----------NDLSKKVLSIIDKYAERGLR 456 (885)
T ss_dssp CCSSCCBCCCCCCTTTCCCCCBBCSSSS-CBCBCCCCSGGGTSSSSCCC-----------STTTTTHHHHHHHHTTTTCE
T ss_pred hhcCceeecccCCcccceEEEEEEecCC-cEEEEEeCCHHHHHHhccCc-----------hhhHHHHHHHHHHHHhCCCe
Confidence 3457788899999999999998876444 36788999999999999631 12234567788899999999
Q ss_pred hhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------
Q 043535 480 CLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------ 553 (881)
Q Consensus 480 vl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------ 553 (881)
++++|++++++.+.+..|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.+|.++|+++|+...
T Consensus 457 vl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~ 536 (885)
T 3b8c_A 457 SLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 536 (885)
T ss_dssp EEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSS
T ss_pred EEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcce
Confidence 99999999877666677889999999999999999999999999999999999999999999999999999631
Q ss_pred ----hhhc-CCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhh
Q 043535 554 ----EFRN-YTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKES 628 (881)
Q Consensus 554 ----~~~~-~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ 628 (881)
+.++ +++.++.+.+++..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||+||||+ +|++.++++
T Consensus 537 l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~a 615 (885)
T 3b8c_A 537 LLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGA 615 (885)
T ss_dssp CCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGG
T ss_pred eeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHh
Confidence 2222 4445567778888999999999999999999999999999999999999999999999999 899999999
Q ss_pred cCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhccc
Q 043535 629 SDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTE 708 (881)
Q Consensus 629 ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~ 708 (881)
||+++.++++.++++++++||++|+|+++++.|.+++|+..++..++. .+..+.|++|+|++|+|++++..+ +++++|
T Consensus 616 ADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~-~~~~~~~l~p~~il~i~l~~d~~~-l~l~~~ 693 (885)
T 3b8c_A 616 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI-ALIWEFDFSAFMVLIIAILNDGTI-MTISKD 693 (885)
T ss_dssp CSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHH-HSSCSSCSCHHHHHHHHHHHHTTT-CCCCCC
T ss_pred cceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcCcCHHHHHHHHHHHHHHH-Hhhccc
Confidence 999999999999999999999999999999999999998654433333 334567899999999999999865 788877
Q ss_pred CCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc------ccCCC-----cccchhH-HHHHHHHHH
Q 043535 709 QPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGES------VLGVN-----ENVKDTM-IFNTFVLCQ 776 (881)
Q Consensus 709 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~t~-~f~~~v~~~ 776 (881)
++++. ++| +...+ +..+..++..+++.++..+.++++... .++.+ ....+|. +|.++++.|
T Consensus 694 ~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~ 766 (885)
T 3b8c_A 694 RVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQ 766 (885)
T ss_dssp CCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTG
T ss_pred ccCcc---cCC---cchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHH
Confidence 66442 222 22222 333333444555555544443332211 12321 1223344 455677777
Q ss_pred HHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 777 VFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 777 ~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
+ +.+++|+. +.++++.. .+++++.+++..++++++.++....+|++.|++|.+|+++++.+++.+++.++.|++.|
T Consensus 767 ~-~~~~~Rs~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~ 842 (885)
T 3b8c_A 767 A-LIFVTRSR-SWSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842 (885)
T ss_dssp G-GTTCSSSC-TTTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHT
T ss_pred H-HHHHhccC-CCCcccCc-cHHHHHHHHHHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 78999874 33344432 33333332322333333333222345679999999999999999999999999998755
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-74 Score=685.37 Aligned_cols=512 Identities=22% Similarity=0.296 Sum_probs=417.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEe-CCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC
Q 043535 111 IYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVR-NKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES 187 (881)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~R-dg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes 187 (881)
+++++..+.+.+++++..+.++++.+ +.+++|+| ||++++|++++|+|||+|.|++||+|||||+|++|++ .||||
T Consensus 196 ~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES 274 (736)
T 3rfu_A 196 TLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDES 274 (736)
T ss_dssp HHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-Eeeec
Confidence 33444444454444443433555433 34778887 9999999999999999999999999999999999998 89998
Q ss_pred ----CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHH
Q 043535 188 ----DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFS 263 (881)
Q Consensus 188 ----~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~ 263 (881)
|+ .|+.+..++.+++||.+.+|.++++|++||.+|.+|++.+.+.+++.+++|+|+.+++++.+++++.++++++
T Consensus 275 ~LTGES-~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~ 353 (736)
T 3rfu_A 275 MVTGEP-IPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVL 353 (736)
T ss_dssp SSTTCS-SCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcc-ccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55 7777779999999999999999999999999999999999999988999999999999999999999999888
Q ss_pred HHHHHh-------------hHHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCcccccc
Q 043535 264 GLLMIL-------------DLNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTL 330 (881)
Q Consensus 264 ~~~~~~-------------~~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~ 330 (881)
++++|+ ....++.++|||+|++++|+++..+..+++++|+++|+++++|++|++|++|||||||||+
T Consensus 354 ~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~ 433 (736)
T 3rfu_A 354 SFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTE 433 (736)
T ss_dssp HHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBC
T ss_pred HHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcC
Confidence 887764 1223445569999999999999999999999999999999999999999999999999999
Q ss_pred CceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEec
Q 043535 331 NQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEA 410 (881)
Q Consensus 331 ~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (881)
|+|++.++.... .+..+.+..+.+++ ..+.||++.|+++++. +.+.+. ....+
T Consensus 434 g~~~v~~i~~~~-~~~~~~l~~aa~le----------------~~s~hPla~Aiv~~a~-~~~~~~---------~~~~~ 486 (736)
T 3rfu_A 434 GHPKLTRIVTDD-FVEDNALALAAALE----------------HQSEHPLANAIVHAAK-EKGLSL---------GSVEA 486 (736)
T ss_dssp SSCEEEEEEESS-SCHHHHHHHHHHHH----------------HSSCCHHHHHHHHHHH-TTCCCC---------CCCSC
T ss_pred CceEEEEEEecC-CCHHHHHHHHHHHh----------------hcCCChHHHHHHHHHH-hcCCCc---------cCccc
Confidence 999998875211 11223333222221 1245799999999887 444432 22346
Q ss_pred CCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC
Q 043535 411 FNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV 490 (881)
Q Consensus 411 F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~ 490 (881)
|++.+++ ++.... ++..+ .+|+++.+.+.+.. ...+.+..++++.+|+|++++|+
T Consensus 487 f~~~~g~-gv~~~~-~g~~~---~~G~~~~~~~~~~~---------------~~~~~~~~~~~~~~G~~vl~va~----- 541 (736)
T 3rfu_A 487 FEAPTGK-GVVGQV-DGHHV---AIGNARLMQEHGGD---------------NAPLFEKADELRGKGASVMFMAV----- 541 (736)
T ss_dssp CCCCTTT-EEEECS-SSSCE---EEESHHHHHHHCCC---------------CHHHHHHHHHHHHTTCEEEEEEE-----
T ss_pred ccccCCc-eEEEEE-CCEEE---EEcCHHHHHHcCCC---------------hhHHHHHHHHHHhcCCeEEEEEE-----
Confidence 7777665 344333 33333 45999988764421 12355667889999999999995
Q ss_pred CcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhh
Q 043535 491 PEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKI 570 (881)
Q Consensus 491 ~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~ 570 (881)
|.+++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|++.
T Consensus 542 --------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~------------------ 595 (736)
T 3rfu_A 542 --------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK------------------ 595 (736)
T ss_dssp --------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC------------------
T ss_pred --------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE------------------
Confidence 668999999999999999999999999999999999999999999999999987
Q ss_pred eeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHH
Q 043535 571 YVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRC 650 (881)
Q Consensus 571 ~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~ 650 (881)
++++++|++|.++++.++++|+.|+|+|||.||+|||+.||+||||| ++++.++++||+++.+++++++.+++++||+
T Consensus 596 -v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~ 673 (736)
T 3rfu_A 596 -VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSES 673 (736)
T ss_dssp -EECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHH
T ss_pred -EEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC--CCChhHHHHHHHHHHHHHHHHHH
Q 043535 651 VYVNIQKFIQFHLTISVSSVLFNFLAAVL-VG--KNPLTAVQLLWMNLIVLTLGALA 704 (881)
Q Consensus 651 ~~~~i~~~i~~~~~~n~~~i~~~~~~~~~-~~--~~pl~~~q~l~~~~~~~~~~~l~ 704 (881)
+++|+++++.|++.+|++.+.+....... .+ -+|+...-.+..+.+...+.++-
T Consensus 674 t~~~i~qnl~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslr 730 (736)
T 3rfu_A 674 TMSNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAMALSSVSVIINALR 730 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHhhHHHHHHHHHH
Confidence 99999999999999999887665422111 12 14544444444555555555443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-72 Score=664.10 Aligned_cols=483 Identities=24% Similarity=0.305 Sum_probs=399.4
Q ss_pred CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCceeecccEEeeCce
Q 043535 137 SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGYG 212 (881)
Q Consensus 137 ~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~~ 212 (881)
+.+++|+|||++++|+++||+|||+|.|++||+|||||++++|++ .+||| |+ .|+.+..++.+|+||.+.+|.+
T Consensus 132 ~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES-~Pv~K~~g~~v~~Gt~~~~g~~ 209 (645)
T 3j08_A 132 AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEP-VPVLKSKGDEVFGATINNTGVL 209 (645)
T ss_dssp CSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCS-SCEEECTTCEECTTCEECSSCE
T ss_pred CCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcE-EEEcccccCCC-CceecCCCCEeeccEEEecCcE
Confidence 458999999999999999999999999999999999999999998 89998 54 7777779999999999999999
Q ss_pred eEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------hHHHHHHhhcc
Q 043535 213 RMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL------------DLNAVVNLIIP 280 (881)
Q Consensus 213 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~------------~~~~~l~i~iP 280 (881)
+++|++||.+|.+|++.+.+++.+.+++|+++.+++++.+++++.+++++++++.|+ ....++.++||
T Consensus 210 ~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P 289 (645)
T 3j08_A 210 KIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACP 289 (645)
T ss_dssp EEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSC
T ss_pred EEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999988888887664 13455667799
Q ss_pred ccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhcccc
Q 043535 281 EGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTA 360 (881)
Q Consensus 281 ~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (881)
|+|++++|+++..++.+++++|+++|+++++|++|++|++|||||||||+|+|++.++..... +..+.+..+..+.
T Consensus 290 ~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~-~~~~~l~~aa~~e--- 365 (645)
T 3j08_A 290 CAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-DERELLRLAAIAE--- 365 (645)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSS-CHHHHHHHHHHHH---
T ss_pred hHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCC-CHHHHHHHHHHHh---
Confidence 999999999999999999999999999999999999999999999999999999998743321 2223333222211
Q ss_pred ceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHH
Q 043535 361 GFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEI 440 (881)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~ 440 (881)
..+.||++.|+++++. +.+.+.... .+|++..++ ++.. . .+.+|+++.
T Consensus 366 -------------~~s~hPla~Aiv~~a~-~~g~~~~~~---------~~~~~~~g~-g~~~-----~---~v~~g~~~~ 413 (645)
T 3j08_A 366 -------------RRSEHPIAEAIVKKAL-EHGIELGEP---------EKVEVIAGE-GVVA-----D---GILVGNKRL 413 (645)
T ss_dssp -------------TTCCSHHHHHHHHHHH-HTTCCCCSC---------CCCEEETTT-EEEE-----T---TEEEECHHH
T ss_pred -------------hcCCChhHHHHHHHHH-hcCCCcCCc---------cceEEecCC-ceEE-----E---EEEECCHHH
Confidence 1245799999999876 444432211 112211111 1111 1 135699887
Q ss_pred HHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHH
Q 043535 441 ILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAV 520 (881)
Q Consensus 441 i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I 520 (881)
+.+.... . ++.+.+..+++..+|+|++++|+ |++++|+++++|++||+++++|
T Consensus 414 ~~~~~~~----------~----~~~~~~~~~~~~~~g~~~l~va~-------------~~~~~G~i~~~D~l~~~~~~~i 466 (645)
T 3j08_A 414 MEDFGVA----------V----SNEVELALEKLEREAKTAVIVAR-------------NGRVEGIIAVSDTLKESAKPAV 466 (645)
T ss_dssp HHHTTCC----------C----CHHHHHHHHHHHTTTCCCEEEEE-------------TTEEEEEEEEECCCTTTHHHHH
T ss_pred HHhcCCC----------c----cHHHHHHHHHHHhcCCeEEEEEE-------------CCEEEEEEEecCCchhHHHHHH
Confidence 7653221 1 23466777889999999999984 6799999999999999999999
Q ss_pred HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcC
Q 043535 521 EDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGN 600 (881)
Q Consensus 521 ~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGD 600 (881)
++|+++|++++|+|||+..+|.++|+++|++. ++++++|++|.++++.++++ +.|+|+||
T Consensus 467 ~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGD 526 (645)
T 3j08_A 467 QELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGD 526 (645)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------EECSCCTTCHHHHHHHHTTT-CCEEEEEC
T ss_pred HHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-------------------EEEeCCHHhHHHHHHHHhhC-CeEEEEeC
Confidence 99999999999999999999999999999987 99999999999999999998 89999999
Q ss_pred CccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043535 601 GIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLV 680 (881)
Q Consensus 601 g~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~ 680 (881)
|.||+||++.||+||||| ++++.++++||+++.+++++++.+++++||++++|+++++.|++++|++.+.+.+.+....
T Consensus 527 g~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~~~~~ 605 (645)
T 3j08_A 527 GINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPI 605 (645)
T ss_dssp SSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred CHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 999999999999999999 9999999999999999999999999999999999999999999999998766554332211
Q ss_pred ---CCCChhHHHHHHHHHHHHHHHHHHh
Q 043535 681 ---GKNPLTAVQLLWMNLIVLTLGALAL 705 (881)
Q Consensus 681 ---~~~pl~~~q~l~~~~~~~~~~~l~l 705 (881)
..+|....-.+..+.+...+.++-+
T Consensus 606 ~g~~l~p~~a~~~m~~ss~~vv~nslrl 633 (645)
T 3j08_A 606 FGVVFRPEFAGLAMAMSSVSVVANSLLL 633 (645)
T ss_dssp CCCSCCHHHHHHHHHTHHHHHHHHTTSC
T ss_pred cccccCHHHHHHHHhcchHHHHHhhHHh
Confidence 1233333444445555555555544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-71 Score=669.54 Aligned_cols=483 Identities=24% Similarity=0.305 Sum_probs=399.2
Q ss_pred CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCceeecccEEeeCce
Q 043535 137 SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGYG 212 (881)
Q Consensus 137 ~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~~ 212 (881)
+.+++|+|||++++|+++||+|||+|.|++||+|||||++++|++ .+||| |+ .|+.+..++.+|+||.+.+|.+
T Consensus 210 ~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES-~pv~K~~g~~v~~Gt~~~~g~~ 287 (723)
T 3j09_A 210 AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEP-VPVLKSKGDEVFGATINNTGVL 287 (723)
T ss_dssp CSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCS-SCEEECTTCEECTTCEECSSCE
T ss_pred CCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCe-EEecccccCCC-cceeecCCCeeccceEEecCcE
Confidence 458999999999999999999999999999999999999999998 89998 55 7777779999999999999999
Q ss_pred eEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------hHHHHHHhhcc
Q 043535 213 RMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL------------DLNAVVNLIIP 280 (881)
Q Consensus 213 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~------------~~~~~l~i~iP 280 (881)
+++|++||.+|.+|++.+.+++.+.+++|+++.+++++.+++++.++++++++++|+ ....++.++||
T Consensus 288 ~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P 367 (723)
T 3j09_A 288 KIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACP 367 (723)
T ss_dssp EEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSC
T ss_pred EEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999999988888877654 12344556699
Q ss_pred ccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhcccc
Q 043535 281 EGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTA 360 (881)
Q Consensus 281 ~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (881)
|+|++++|+++..++.+++++|+++|+++++|+||++|++|||||||||+|+|++.++..... +..+.+..+..+.
T Consensus 368 ~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~-~~~~~l~~aa~~e--- 443 (723)
T 3j09_A 368 CAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-DERELLRLAAIAE--- 443 (723)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSS-CHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCC-CHHHHHHHHHHHh---
Confidence 999999999999999999999999999999999999999999999999999999998743321 1223333222211
Q ss_pred ceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHH
Q 043535 361 GFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEI 440 (881)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~ 440 (881)
..+.||++.|+++++. +.+.+.... .+|++...+ ++.. . -+.+|+++.
T Consensus 444 -------------~~s~hP~~~Ai~~~a~-~~~~~~~~~---------~~~~~~~g~-g~~~-----~---~~~~g~~~~ 491 (723)
T 3j09_A 444 -------------RRSEHPIAEAIVKKAL-EHGIELGEP---------EKVEVIAGE-GVVA-----D---GILVGNKRL 491 (723)
T ss_dssp -------------TTCCSHHHHHHHHHHH-HTTCCCCSC---------CCCEEETTT-EEEE-----T---TEEEECHHH
T ss_pred -------------ccCCCchhHHHHHHHH-hcCCCcCCc---------cceEEecCC-ceEE-----E---EEEECCHHH
Confidence 1245799999999876 444432211 112211111 1111 1 135699887
Q ss_pred HHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHH
Q 043535 441 ILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAV 520 (881)
Q Consensus 441 i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I 520 (881)
+.+.... . ++.+.+..++++.+|+|++++|+ |++++|+++++|++||+++++|
T Consensus 492 ~~~~~~~----------~----~~~~~~~~~~~~~~g~~~~~va~-------------~~~~~G~i~i~D~~~~~~~~~i 544 (723)
T 3j09_A 492 MEDFGVA----------V----SNEVELALEKLEREAKTAVIVAR-------------NGRVEGIIAVSDTLKESAKPAV 544 (723)
T ss_dssp HHHTTCC----------C----CHHHHHHHHHHHTTTCEEEEEEE-------------TTEEEEEEEEECCSCTTHHHHH
T ss_pred HHhcCCC----------c----cHHHHHHHHHHHhcCCeEEEEEE-------------CCEEEEEEeecCCcchhHHHHH
Confidence 7653321 1 23466778889999999999984 6799999999999999999999
Q ss_pred HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcC
Q 043535 521 EDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGN 600 (881)
Q Consensus 521 ~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGD 600 (881)
++|+++|++++|+|||+..+|.++|+++|++. ++++++|++|.++++.++++ +.|+|+||
T Consensus 545 ~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGD 604 (723)
T 3j09_A 545 QELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGD 604 (723)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------EECSCCTTCHHHHHHHHTTT-CCEEEEEC
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE-------------------EEccCCHHHHHHHHHHHhcC-CeEEEEEC
Confidence 99999999999999999999999999999987 99999999999999999998 89999999
Q ss_pred CccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043535 601 GIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLV 680 (881)
Q Consensus 601 g~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~ 680 (881)
|.||+|||+.||+||||| ++++.++++||+++.++++.++.+++++||++++|+++++.|++++|++.+.+.+.+....
T Consensus 605 g~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~~~~~ 683 (723)
T 3j09_A 605 GINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPI 683 (723)
T ss_dssp SSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred ChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 999999999999999999 9999999999999999999999999999999999999999999999998766654432211
Q ss_pred ---CCCChhHHHHHHHHHHHHHHHHHHh
Q 043535 681 ---GKNPLTAVQLLWMNLIVLTLGALAL 705 (881)
Q Consensus 681 ---~~~pl~~~q~l~~~~~~~~~~~l~l 705 (881)
..+|....-.+..+.+...+.++-+
T Consensus 684 ~g~~l~p~~a~~~m~~ss~~vv~nslrl 711 (723)
T 3j09_A 684 FGVVFRPEFAGLAMAMSSVSVVANSLLL 711 (723)
T ss_dssp CCCSCCHHHHHHHHHTHHHHHHHHTTSC
T ss_pred cccccCHHHHHHHHhccHHHHHHHHHHh
Confidence 1233333444455555555555544
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-30 Score=276.93 Aligned_cols=260 Identities=23% Similarity=0.317 Sum_probs=195.9
Q ss_pred HHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcc
Q 043535 293 YSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLE 372 (881)
Q Consensus 293 ~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 372 (881)
.++.+++++|+++|+++++|.+++++++|||||||||+|+|.+.... + ..+.+.... ..
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~---~--~~~~l~~~~------~~---------- 62 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI---G--DSLSLAYAA------SV---------- 62 (263)
Confidence 46788999999999999999999999999999999999999988753 1 111111111 11
Q ss_pred eeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCC
Q 043535 373 IELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDAS 452 (881)
Q Consensus 373 ~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~ 452 (881)
...+.||...|+.++.. ..+..... ...|..... .++-... ++..+ .-|+++
T Consensus 63 e~~s~hp~a~ai~~~~~-~~g~~~~~---------~~~~~~~~G-~g~~~~~-~~~~~---~~G~~~------------- 114 (263)
T 2yj3_A 63 EALSSHPIAKAIVKYAK-EQGVKILE---------VKDFKEISG-IGVRGKI-SDKII---EVKKAE------------- 114 (263)
Confidence 12356799999988765 33332110 001110000 0000000 00000 001110
Q ss_pred CceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEE
Q 043535 453 GNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKM 532 (881)
Q Consensus 453 ~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~ 532 (881)
+|.+ +.++ .+-.+.|.+.+.|+++|++.+++++|+++|++++|
T Consensus 115 -----------------------~~~~-~~~~-------------~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 157 (263)
T 2yj3_A 115 -----------------------NNND-IAVY-------------INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIII 157 (263)
Confidence 2222 2222 24468899999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 043535 533 ITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEAN 612 (881)
Q Consensus 533 ~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~ 612 (881)
+||++...+..+++++|+.. +|..+.|+.|...++.++..++.|+|||||.||++|++.||
T Consensus 158 ~T~~~~~~~~~~~~~~gl~~-------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Ag 218 (263)
T 2yj3_A 158 LSGDKEDKVKELSKELNIQE-------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALAD 218 (263)
Confidence 99999999999999999986 77888899999999999999999999999999999999999
Q ss_pred ccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHH
Q 043535 613 VGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKF 658 (881)
Q Consensus 613 vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 658 (881)
+|++++ ++.+.++..||+++.++++..+.+++..+|++++++++|
T Consensus 219 v~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 219 VSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999 788889999999998889999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=238.97 Aligned_cols=279 Identities=25% Similarity=0.346 Sum_probs=201.7
Q ss_pred HHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcce
Q 043535 294 SMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEI 373 (881)
Q Consensus 294 ~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 373 (881)
+.++++++|+++|+++++|++++++++|||||||||.+.+.+..+..... +..+.+..+.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-~~~~~l~~~~~~e---------------- 71 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-DERELLRLAAIAE---------------- 71 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-CHHHHHHHHHHHT----------------
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-CHHHHHHHHHHHh----------------
Confidence 56889999999999999999999999999999999999998865421111 2223333222111
Q ss_pred eecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCC
Q 043535 374 ELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASG 453 (881)
Q Consensus 374 ~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~ 453 (881)
..+.||++.|+.++.. ..|.+.... ....... .+++.. . -+.+|+++.+.+.+..
T Consensus 72 ~~s~hp~~~a~~~~~~-~~g~~~~~~----~~~~~~~------G~~~~~-----~---~~~~g~~~~~~~~~~~------ 126 (287)
T 3a1c_A 72 RRSEHPIAEAIVKKAL-EHGIELGEP----EKVEVIA------GEGVVA-----D---GILVGNKRLMEDFGVA------ 126 (287)
T ss_dssp TTCCSHHHHHHHHHHH-HTTCCCCCC----SCEEEET------TTEEEE-----T---TEEEECHHHHHHTTCC------
T ss_pred hcCCCHHHHHHHHHHH-hcCCCcccc----ccceeec------CCCeEE-----E---EEEECCHHHHHhcCCC------
Confidence 1246899999998776 555432110 0011110 111111 1 1245776654432211
Q ss_pred ceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEE
Q 043535 454 NVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMI 533 (881)
Q Consensus 454 ~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~ 533 (881)
++ +.+.+..+.+..+|.+++++++ +..+.|.+...++++|++.++++.|+++|+++.++
T Consensus 127 ----~~----~~~~~~~~~~~~~g~~~i~~~~-------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~ 185 (287)
T 3a1c_A 127 ----VS----NEVELALEKLEREAKTAVIVAR-------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMI 185 (287)
T ss_dssp ----CC----HHHHHHHHHHHHTTCEEEEEEE-------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEE
T ss_pred ----cc----HHHHHHHHHHHhCCCeEEEEEE-------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEE
Confidence 11 2244556677788999988885 45788998999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCc
Q 043535 534 TGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANV 613 (881)
Q Consensus 534 TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~v 613 (881)
||++...+..+++.+|+.. .|....|+.|...++.+... +.++|+||+.||++|.+.||+
T Consensus 186 T~~~~~~~~~~l~~~gl~~-------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~ 245 (287)
T 3a1c_A 186 TGDNWRSAEAISRELNLDL-------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADL 245 (287)
T ss_dssp CSSCHHHHHHHHHHHTCSE-------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSE
T ss_pred eCCCHHHHHHHHHHhCCce-------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCe
Confidence 9999999999999999986 78888899999999999888 899999999999999999999
Q ss_pred cEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHH
Q 043535 614 GLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQ 656 (881)
Q Consensus 614 gIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 656 (881)
+++++ ++.+..+..||+++.++++..+.+++..+|+++++++
T Consensus 246 ~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 246 GIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp EEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred eEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 99998 7766677889999988899999999999999998875
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-23 Score=222.36 Aligned_cols=276 Identities=24% Similarity=0.317 Sum_probs=192.1
Q ss_pred ccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHH
Q 043535 305 VRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAI 384 (881)
Q Consensus 305 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al 384 (881)
+|+++++|.+++++.||||+|||||.|+|++..+..... ...+.+.....+.. .+.++...++
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-~~~~~~~~~~~~~~----------------~s~~~~~~a~ 63 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-SEDELLQIAASLEA----------------RSEHPIAAAI 63 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-CHHHHHHHHHHHHT----------------TCCSHHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-CHHHHHHHHHHhhc----------------cCCCHHHHHH
Confidence 589999999999999999999999999999988643222 22222222222111 1234777777
Q ss_pred HhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHH
Q 043535 385 LSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARE 464 (881)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~ 464 (881)
.+... ..+..... .......+ .......+ ++..+ ..|+++.+.+..... .
T Consensus 64 ~~~~~-~~g~~~~~----~~~~~~~~----g~~~~~~~---~~~~~---~~~~~~~~~~~~~~~----------~----- 113 (280)
T 3skx_A 64 VEEAE-KRGFGLTE----VEEFRAIP----GKGVEGIV---NGRRY---MVVSPGYIRELGIKT----------D----- 113 (280)
T ss_dssp HHHHH-HTTCCCCC----CEEEEEET----TTEEEEEE---TTEEE---EEECHHHHHHTTCCC----------C-----
T ss_pred HHHHH-hcCCCCCC----ccceeecC----CCEEEEEE---CCEEE---EEecHHHHHHcCCCc----------h-----
Confidence 77665 44432211 11111111 11111111 22212 347777666543221 0
Q ss_pred HHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHH
Q 043535 465 RFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAI 544 (881)
Q Consensus 465 ~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~i 544 (881)
+...++...+.+.+..+ .+..++|.+.+.|+++|++.++++.|+++|+++.++||++...+..+
T Consensus 114 ---~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~ 177 (280)
T 3skx_A 114 ---ESVEKLKQQGKTVVFIL-------------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWV 177 (280)
T ss_dssp ---TTHHHHHTTTCEEEEEE-------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred ---HHHHHHHhCCCeEEEEE-------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 11234555565555544 35578999999999999999999999999999999999999999999
Q ss_pred HHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHH
Q 043535 545 ATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV 624 (881)
Q Consensus 545 a~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~ 624 (881)
++.+|+.. .|..+.|.+|...++.+.+.. .++|+||+.||++|++.||+|++|+ ++.+.
T Consensus 178 ~~~~gl~~-------------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~ 236 (280)
T 3skx_A 178 AEELGLDD-------------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIG-AGTDV 236 (280)
T ss_dssp HHHHTCSE-------------------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECS-CCSSS
T ss_pred HHHcCChh-------------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEec-CCcHH
Confidence 99999987 788899999999999998877 5689999999999999999999999 88899
Q ss_pred HHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Q 043535 625 AKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLT 664 (881)
Q Consensus 625 a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 664 (881)
.+..||+++..+++.++.++++.+|+++.++++++.|++.
T Consensus 237 ~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 237 AVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp CCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred HHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988764
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-20 Score=167.43 Aligned_cols=97 Identities=27% Similarity=0.433 Sum_probs=89.2
Q ss_pred cCCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCceeecccEEeeCc
Q 043535 136 NSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGY 211 (881)
Q Consensus 136 ~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~ 211 (881)
.+.+++|+|||++++|++++|+|||+|.+++||+|||||++++|++ .+||| |+ .|+.+..++.+|+||.+.+|.
T Consensus 10 ~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs-~pv~k~~g~~v~aGt~~~~G~ 87 (113)
T 2hc8_A 10 QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEP-VPVLKSKGDEVFGATINNTGV 87 (113)
T ss_dssp SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCS-SCEEECTTCEECTTCEECSSC
T ss_pred CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCC-ccEEECCCCEEEeCCEEeece
Confidence 3568999999999999999999999999999999999999999986 99998 44 666666899999999999999
Q ss_pred eeEEEEEEeccchhhHHHhhhcc
Q 043535 212 GRMLATAVGMNTTWGQIMRQTSY 234 (881)
Q Consensus 212 ~~~~V~~tG~~T~~g~i~~~~~~ 234 (881)
+.++|++||.+|.+|++.+.+..
T Consensus 88 ~~~~V~~~g~~T~~~~i~~lv~~ 110 (113)
T 2hc8_A 88 LKIRATRVGGETLLAQIVKLVED 110 (113)
T ss_dssp EEEEEEECGGGSHHHHHHHHHHH
T ss_pred EEEEEEEecCcCHHHHHHHHHHH
Confidence 99999999999999999988754
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=196.69 Aligned_cols=141 Identities=13% Similarity=0.112 Sum_probs=113.3
Q ss_pred cccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhh------hcCCHHHHHHHH--hhheeeeccCH
Q 043535 507 GIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEF------RNYTEEEKMEKV--EKIYVMARASP 578 (881)
Q Consensus 507 ~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~------~~~~~~~~~~~~--~~~~v~~~~~p 578 (881)
...+++||++.++++.|+++|++++|+||+...++.++++++|+...+. ...+++.+...+ +....+++..|
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~ 216 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDG 216 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHH
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccH
Confidence 4568999999999999999999999999999999999999999875410 011111100000 01224677788
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccCHHHH---HhCCccEeeCC------CCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 579 DDKLAMVKCLKLKGHVVAVTGNGIKDAPAL---EEANVGLSMGI------QGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 579 ~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l---~~A~vgIam~~------~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.+|...+..+++.++.|+|+|||.||+||+ +.||+||+||. ++.+.+++++|+|+.+|++..++.+|.+
T Consensus 217 ~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il~ 294 (297)
T 4fe3_A 217 ALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSILQ 294 (297)
T ss_dssp HHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHHH
T ss_pred HHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHHH
Confidence 899999999999999999999999999995 49999999984 5677889999999999999999987754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-19 Score=166.15 Aligned_cols=97 Identities=27% Similarity=0.403 Sum_probs=88.3
Q ss_pred CCceEEEeCCE------EEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCceeecccE
Q 043535 137 SIQVDVVRNKR------RQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTK 206 (881)
Q Consensus 137 ~~~v~V~Rdg~------~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~ 206 (881)
+..++|+|+|+ +++|++++|+|||+|.|++||+|||||++++|++ .+||| |+ .|+.+..++.+|+||.
T Consensus 17 p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs-~pv~k~~g~~v~aGt~ 94 (124)
T 2kij_A 17 ATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEA-MPVAKKPGSTVIAGSI 94 (124)
T ss_dssp CSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCS-SCEECCTTEEECTTCE
T ss_pred CCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCC-ccEEeCCCCEEEcCCE
Confidence 46899999764 6889999999999999999999999999999998 99998 44 6666679999999999
Q ss_pred EeeCceeEEEEEEeccchhhHHHhhhccC
Q 043535 207 VVDGYGRMLATAVGMNTTWGQIMRQTSYN 235 (881)
Q Consensus 207 v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 235 (881)
+.+|.+.++|++||.+|.+|+|.+.+..+
T Consensus 95 ~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 95 NQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 99999999999999999999999988653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-18 Score=170.81 Aligned_cols=131 Identities=21% Similarity=0.320 Sum_probs=111.1
Q ss_pred cCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCce
Q 043535 376 SGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNV 455 (881)
Q Consensus 376 ~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~ 455 (881)
.+||+|.|+++++. ..+ ....+..++++..+||+|+||||+++++.+++ ++++++|||||.|+++|+.+.. +|..
T Consensus 32 ~~n~~d~Ail~~~~-~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g-~~~l~~KGApE~IL~~C~~~~~-~g~~ 106 (170)
T 3gwi_A 32 LKNLLDTAVLEGTD-EES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTE-HHQLVCKGALQEILNVCSQVRH-NGEI 106 (170)
T ss_dssp CCCHHHHHHHHTSC-HHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSS-EEEEEEEECHHHHHTTEEEEEE-TTEE
T ss_pred CCChHHHHHHHHHH-hcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCC-CEEEEEcCCcHHHHHHhHHHhc-CCCc
Confidence 36899999999875 221 23456789999999999999999999986543 5889999999999999998754 7888
Q ss_pred ecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc---ccccccCceeeeeccccCC
Q 043535 456 KHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE---EELNEENLILLGLLGIKDP 511 (881)
Q Consensus 456 ~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~---~~~~e~~l~~lG~i~~~D~ 511 (881)
.++++..++.+.+.+++++.+|+|||++|||.++..+ ....|+||+|+|+++|-|.
T Consensus 107 ~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 107 VPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp EECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 9999999999999999999999999999999986532 3346899999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-13 Score=137.03 Aligned_cols=126 Identities=16% Similarity=0.193 Sum_probs=108.3
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CCE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GHV 594 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~~ 594 (881)
+++.|+++|+++.++||++...+..+++++|+.. +|... ..|.+.++.+.++ .+.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~-------------------~f~~~--~~K~~~~~~~~~~~g~~~~~ 112 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH-------------------LFQGR--EDKLVVLDKLLAELQLGYEQ 112 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-------------------EECSC--SCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-------------------HhcCc--CChHHHHHHHHHHcCCChhH
Confidence 8999999999999999999999999999999986 55544 6677777776655 467
Q ss_pred EEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCC----chHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 043535 595 VAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDN----FATAVTLLNWGRCVYVNIQKFIQFHLTIS 666 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 666 (881)
++++||+.||++|++.||+|++++ ++.+.+++.||+++.+++ ...+.+.+..+|..+.++++++.|.+.+|
T Consensus 113 ~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 113 VAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTTC---
T ss_pred EEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhcccccc
Confidence 999999999999999999999998 899999999999998775 45577788889999999999999988776
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.4e-12 Score=140.08 Aligned_cols=148 Identities=14% Similarity=0.123 Sum_probs=109.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheee-----eccCHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVM-----ARASPDDKLAM 584 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~-----~~~~p~~K~~~ 584 (881)
-++.|++.+.++.|+++|+++.++||+....+..+++++|+... +...-+ ..+..+. .-..+..|.+.
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~-~~~~l~------~~d~~~tg~~~~~~~~~kpk~~~ 249 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYA-QSNTLE------IVSGKLTGQVLGEVVSAQTKADI 249 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEE------EETTEEEEEEESCCCCHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeE-EeeeeE------eeCCeeeeeecccccChhhhHHH
Confidence 36899999999999999999999999999999999999999751 000000 0000000 00123455555
Q ss_pred HHHHhh----cCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHH
Q 043535 585 VKCLKL----KGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQ 660 (881)
Q Consensus 585 v~~l~~----~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~ 660 (881)
++.+.+ ..+.++|+|||.||++|++.||+|++| ++.+.+++.||+++..+++.++..++........+++.++.
T Consensus 250 ~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~ 327 (335)
T 3n28_A 250 LLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSK 327 (335)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccc
Confidence 555443 346799999999999999999999999 78899999999999999999999999988888888999998
Q ss_pred HHHHHH
Q 043535 661 FHLTIS 666 (881)
Q Consensus 661 ~~~~~n 666 (881)
+.+.+|
T Consensus 328 ~~~~~~ 333 (335)
T 3n28_A 328 EGHHHH 333 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 888776
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.6e-11 Score=121.97 Aligned_cols=132 Identities=12% Similarity=0.101 Sum_probs=106.5
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK 591 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 591 (881)
+.+++.++|++|+++|++++++||++...+..+++++|+.. .|... ..|...++.+.++
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-------------------~~~~~--k~k~~~~~~~~~~ 94 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------FFLGK--LEKETACFDLMKQ 94 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------EEESC--SCHHHHHHHHHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce-------------------eecCC--CCcHHHHHHHHHH
Confidence 34567899999999999999999999999999999999986 44433 4466666655443
Q ss_pred -C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHH----HHHHHhHHHHHHHHHHHHHHH
Q 043535 592 -G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAV----TLLNWGRCVYVNIQKFIQFHL 663 (881)
Q Consensus 592 -g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~----~~i~~gR~~~~~i~~~i~~~~ 663 (881)
| +.++++||+.||++|++.|+++++++ ++.+.+++.||+++.+++..++. +.+...|..+.+++.++.|..
T Consensus 95 ~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 95 AGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHHHCHHHHHH
T ss_pred cCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhhhhccchhh
Confidence 4 67999999999999999999999998 89999999999999988766666 344456667778877777665
Q ss_pred HH
Q 043535 664 TI 665 (881)
Q Consensus 664 ~~ 665 (881)
..
T Consensus 174 ~~ 175 (180)
T 1k1e_A 174 SV 175 (180)
T ss_dssp HG
T ss_pred hh
Confidence 43
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.24 E-value=9.5e-12 Score=124.96 Aligned_cols=103 Identities=19% Similarity=0.241 Sum_probs=88.0
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CC
Q 043535 518 KAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GH 593 (881)
Q Consensus 518 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~ 593 (881)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.+.+. .+
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-------------------~~~~~--k~k~~~~~~~~~~~~~~~~ 117 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL-------------------IYQGQ--DDKVQAYYDICQKLAIAPE 117 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-------------------EECSC--SSHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-------------------EeeCC--CCcHHHHHHHHHHhCCCHH
Confidence 45999999999999999999999999999999986 55554 4566666655543 45
Q ss_pred EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHH
Q 043535 594 VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 594 ~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+++
T Consensus 118 ~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~ 165 (195)
T 3n07_A 118 QTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAV 165 (195)
T ss_dssp GEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHH
T ss_pred HEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHH
Confidence 7999999999999999999999999 99999999999999988766643
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.8e-11 Score=124.88 Aligned_cols=138 Identities=15% Similarity=0.121 Sum_probs=105.6
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------hh---h-c-C------------------
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------EF---R-N-Y------------------ 558 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------~~---~-~-~------------------ 558 (881)
...+.+++.++|++|+++|++++++|||+...+..+++++|+..+ .+ . + .
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999998642 00 0 0 0
Q ss_pred -----------------------CHHHHHHHHh--hhee-----eeccCH--HHHHHHHHHHhhc----CCEEEEEcCCc
Q 043535 559 -----------------------TEEEKMEKVE--KIYV-----MARASP--DDKLAMVKCLKLK----GHVVAVTGNGI 602 (881)
Q Consensus 559 -----------------------~~~~~~~~~~--~~~v-----~~~~~p--~~K~~~v~~l~~~----g~~v~~iGDg~ 602 (881)
+++...+... +..+ +....| .+|...++.+.++ .+.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 0111111111 1111 112224 5799999888765 24689999999
Q ss_pred cCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 603 KDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 603 ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
||.+|++.|++|++|+ ++.+.+++.||+++.+++.+++.+++++
T Consensus 180 nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 9999999999999999 8999999999999999999999988764
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=3e-11 Score=121.14 Aligned_cols=122 Identities=15% Similarity=0.100 Sum_probs=99.2
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc--CHHHHHHHHHHHhhcCCEEE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA--SPDDKLAMVKCLKLKGHVVA 596 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~~v~~l~~~g~~v~ 596 (881)
+|+.|+++|+++.++||++...+..+++++|+.. +|... .|+-..++++.+.-..+.++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-------------------~~~~~kpk~~~~~~~~~~~~~~~~~~~ 114 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-------------------YYKGQVDKRSAYQHLKKTLGLNDDEFA 114 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-------------------EECSCSSCHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-------------------ceeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 4999999999999999999999999999999986 55544 44455555555555566799
Q ss_pred EEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH----HHHHHHHhHHHHHHHHHHHH
Q 043535 597 VTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT----AVTLLNWGRCVYVNIQKFIQ 660 (881)
Q Consensus 597 ~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~~gR~~~~~i~~~i~ 660 (881)
|+||+.||++|++.|+++++++ ++.+.++..||+++.+++..+ +.+.+...|..+.++.+.+.
T Consensus 115 ~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~ 181 (191)
T 3n1u_A 115 YIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYL 181 (191)
T ss_dssp EEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred EECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 9999999999999999999998 889999999999999887555 44556667777776655444
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-11 Score=118.59 Aligned_cols=112 Identities=18% Similarity=0.163 Sum_probs=91.1
Q ss_pred ceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH--HcCCCchhhhcCCHHHHHHHHhhheeeeccC
Q 043535 500 LILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIAT--QCGILKPEFRNYTEEEKMEKVEKIYVMARAS 577 (881)
Q Consensus 500 l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~ 577 (881)
...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+. ++. .
T Consensus 31 g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--------------------~~~--g 80 (168)
T 3ewi_A 31 QKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK--------------------TEV--S 80 (168)
T ss_dssp CCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--------------------EEC--S
T ss_pred CCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--------------------EEE--C
Confidence 345666666665 3899999999999999999 67888888 56664 222 2
Q ss_pred HHHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHH
Q 043535 578 PDDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 578 p~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
+++|...++.+.++ .+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++-.+++
T Consensus 81 ~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 81 VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTTHH
T ss_pred CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCccHH
Confidence 35688888877665 357999999999999999999999998 99999999999999988777744
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=123.81 Aligned_cols=67 Identities=22% Similarity=0.333 Sum_probs=59.7
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ .+.++++||+.||.+|++.|++|+||+ |+.+.+|+.||+|+.+++.+++.++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 678777777665 346899999999999999999999999 9999999999999999999999988864
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.14 E-value=2.3e-10 Score=122.60 Aligned_cols=67 Identities=19% Similarity=0.249 Sum_probs=59.7
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ .+.|+++||+.||++|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 202 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 202 SKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 477788777665 246899999999999999999999999 9999999999999999999999988864
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.13 E-value=9.3e-11 Score=119.21 Aligned_cols=100 Identities=15% Similarity=0.187 Sum_probs=88.4
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CCE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GHV 594 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~~ 594 (881)
+++.|+++|+++.++||++...+..+++++|+.. +|... ..|.+.++.+.++ .+.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~-------------------~f~~~--k~K~~~l~~~~~~lg~~~~~ 142 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH-------------------LYQGQ--SDKLVAYHELLATLQCQPEQ 142 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-------------------EECSC--SSHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-------------------hhccc--CChHHHHHHHHHHcCcCcce
Confidence 8999999999999999999999999999999986 66655 5677777777665 568
Q ss_pred EEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH
Q 043535 595 VAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT 640 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 640 (881)
++++||+.||++|++.|+++++++ ++.+.++..||+++.+++..+
T Consensus 143 ~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 143 VAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp EEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred EEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 999999999999999999999999 889999999999998876554
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.5e-10 Score=123.93 Aligned_cols=137 Identities=19% Similarity=0.191 Sum_probs=101.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------------h-hh-
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------------------------------E-FR- 556 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------------------~-~~- 556 (881)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+... + ..
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 46788999999999999999999999999999999999998632 0 00
Q ss_pred c-----------------------------------------------------CCHHHHH---HHHh----h-hee---
Q 043535 557 N-----------------------------------------------------YTEEEKM---EKVE----K-IYV--- 572 (881)
Q Consensus 557 ~-----------------------------------------------------~~~~~~~---~~~~----~-~~v--- 572 (881)
. .+++... +.+. . ..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 0 0111111 1111 1 111
Q ss_pred ---eeccCH--HHHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCe--eeccCCchHH
Q 043535 573 ---MARASP--DDKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI--IILDDNFATA 641 (881)
Q Consensus 573 ---~~~~~p--~~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~--vl~~~~~~~i 641 (881)
+....| ..|...++.+.++ | +.++++||+.||.+|++.|++||||+ |+.+.+|+.||+ ++.+++.+++
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGv 275 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAV 275 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchH
Confidence 111222 3588888877665 2 46899999999999999999999999 999999999984 7788999999
Q ss_pred HHHHHH
Q 043535 642 VTLLNW 647 (881)
Q Consensus 642 ~~~i~~ 647 (881)
.++|++
T Consensus 276 a~~i~~ 281 (285)
T 3pgv_A 276 PRYLRK 281 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988763
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=113.58 Aligned_cols=104 Identities=14% Similarity=0.153 Sum_probs=88.4
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CCE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GHV 594 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~~ 594 (881)
+++.|+++|+++.++||++...+..+++.+|+. ++... ..|.+.++.+.+. .+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--------------------~~~~~--~~k~~~l~~~~~~~~~~~~~ 104 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--------------------VLHGI--DRKDLALKQWCEEQGIAPER 104 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--------------------EEESC--SCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--------------------eEeCC--CChHHHHHHHHHHcCCCHHH
Confidence 899999999999999999999999999999986 23333 5577777666554 367
Q ss_pred EEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 595 VAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
++++||+.||++|++.|+++++++ ++.+.+++.||+++.+++..++...+
T Consensus 105 ~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 105 VLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred EEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 899999999999999999999998 88999999999999988876665443
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.9e-10 Score=122.84 Aligned_cols=67 Identities=12% Similarity=0.129 Sum_probs=59.7
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ | +.|+++||+.||.+|++.|++||||+ |+.+.+|+.||+|+.+++.+++.++|++
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 488888877765 2 46899999999999999999999999 9999999999999999999999988863
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.7e-10 Score=121.25 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=48.4
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.|...++.+.++ .+.++++||+.||.+|++.|++|+||+ |+.+.+|+.||+|+.+++.+++.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488888877765 246899999999999999999999999 999999999999999999999998775
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.04 E-value=3.5e-10 Score=119.90 Aligned_cols=67 Identities=18% Similarity=0.133 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ .+.++++||+.||.+|++.|++||||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 588777777654 456899999999999999999999999 9999999999999999999999988865
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.03 E-value=8.7e-10 Score=115.92 Aligned_cols=67 Identities=19% Similarity=0.196 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|+..++.+.++ .+.++++||+.||++|++.|++|+||+ |+.+.+|+.||+|+.+++.+++.+++++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 356666666654 346899999999999999999999998 9999999999999999999999988864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.01 E-value=4e-10 Score=121.72 Aligned_cols=68 Identities=13% Similarity=0.121 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 579 DDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 579 ~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
..|...++.+.++ .+.++++||+.||++|++.|++||||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 3588788777665 246899999999999999999999999 9999999999999999999999988863
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=7.3e-10 Score=107.89 Aligned_cols=104 Identities=15% Similarity=0.139 Sum_probs=86.5
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CCE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GHV 594 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~~ 594 (881)
+++.|+++|+++.++||++...+..+++++|+.. .+.... .|...++.+.++ .+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------~~~~~k--pk~~~~~~~~~~~~~~~~~ 97 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-------------------LFQGVV--DKLSAAEELCNELGINLEQ 97 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-------------------EECSCS--CHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-------------------eecccC--ChHHHHHHHHHHcCCCHHH
Confidence 8999999999999999999999999999999986 454443 355555444433 457
Q ss_pred EEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH-HHHH
Q 043535 595 VAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT-AVTL 644 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~-i~~~ 644 (881)
++|+||+.||++|.+.||++++++ ++.+.+++.||+++.+++..+ +.++
T Consensus 98 ~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~ 147 (164)
T 3e8m_A 98 VAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREF 147 (164)
T ss_dssp EEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHH
Confidence 999999999999999999999998 899999999999999888555 4433
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.5e-09 Score=114.69 Aligned_cols=67 Identities=18% Similarity=0.251 Sum_probs=60.3
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ .+.++++||+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 588888877765 346899999999999999999999999 9999999999999999999999988865
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.3e-09 Score=110.84 Aligned_cols=129 Identities=16% Similarity=0.160 Sum_probs=96.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee---ee-c-cCHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV---MA-R-ASPDDKLAM 584 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v---~~-~-~~p~~K~~~ 584 (881)
-++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+... +...-. ..+..+ +. . .....|.+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~-f~~~~~------~~~~~~~~~~~~~~~~~k~k~~~ 146 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAA-FSNTLI------VENDALNGLVTGHMMFSHSKGEM 146 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEE------EETTEEEEEEEESCCSTTHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchh-ccceeE------EeCCEEEeeeccCCCCCCChHHH
Confidence 45889999999999999999999999999999999999998751 000000 000000 00 0 124556776
Q ss_pred HHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 585 VKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 585 v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
++.+.++ .+.++++||+.||++|++.||++++| ++.+..++.||+++.++++..+..++.+
T Consensus 147 ~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 147 LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 6666544 35689999999999999999999999 6788899999999999999998877654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.8e-09 Score=120.32 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=106.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-----ccCHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-----RASPDDKLAMV 585 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-----~~~p~~K~~~v 585 (881)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+... +....+ ..+..+.. -..++.|.+++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~-~~~~l~------~~dg~~tg~~~~~v~~~kpk~~~~ 328 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYV-AANELE------IVDGTLTGRVVGPIIDRAGKATAL 328 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEE-EEECEE------EETTEEEEEECSSCCCHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccce-eeeeEE------EeCCEEEeeEccCCCCCcchHHHH
Confidence 7899999999999999999999999999999999999999751 000000 00000001 11266788877
Q ss_pred HHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHH
Q 043535 586 KCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655 (881)
Q Consensus 586 ~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i 655 (881)
+.+.++ | +.++++|||.||++|++.||+|+++ ++.+..++.||+++..+++.+++.++..+|.-+.+.
T Consensus 329 ~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~~ 400 (415)
T 3p96_A 329 REFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAA 400 (415)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHHH
T ss_pred HHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHHh
Confidence 776654 3 5689999999999999999999999 578889999999999999999999998888766544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.91 E-value=6.5e-09 Score=107.34 Aligned_cols=137 Identities=17% Similarity=0.205 Sum_probs=101.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch----h----h---------------------h-cC-
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----E----F---------------------R-NY- 558 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----~----~---------------------~-~~- 558 (881)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+..+ + . . ..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 45778999999999999999999999999999999999987542 0 0 0 00
Q ss_pred ----------------------CHHHHHHHHhh----heee-----eccCH--HHHHHHHHHHhhc----CCEEEEEcCC
Q 043535 559 ----------------------TEEEKMEKVEK----IYVM-----ARASP--DDKLAMVKCLKLK----GHVVAVTGNG 601 (881)
Q Consensus 559 ----------------------~~~~~~~~~~~----~~v~-----~~~~p--~~K~~~v~~l~~~----g~~v~~iGDg 601 (881)
.++...+.... ..+. ....| ..|...++.+.++ .+.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 11111111111 1111 11122 3588887777654 3468999999
Q ss_pred ccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 602 IKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 602 ~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.+++++
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 99999999999999998 8889899999999998888899887754
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.90 E-value=5.5e-09 Score=111.42 Aligned_cols=67 Identities=18% Similarity=0.171 Sum_probs=58.1
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ .+.++++||+.||.+|++.|++|++|+ ++.+.+++.||+++.+++.+++.+++++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 577777777654 246899999999999999999999999 8999999999999999899999987763
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=3.1e-09 Score=107.24 Aligned_cols=126 Identities=16% Similarity=0.270 Sum_probs=89.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC--CHHHHHHHHhhheeeec-cCHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY--TEEEKMEKVEKIYVMAR-ASPDDKLAMVKC 587 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~--~~~~~~~~~~~~~v~~~-~~p~~K~~~v~~ 587 (881)
++.+++.++++.++++|+++.++||+....+..+.+.+|+... +... ..+ ... ...+... ..+..|.+.+..
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~-~~~~~~~~~~~~~K~~~l~~ 150 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKD---GKL-TGDVEGEVLKENAKGEILEK 150 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEET---TEE-EEEEECSSCSTTHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEEC---CEE-cCCcccCccCCccHHHHHHH
Confidence 4678999999999999999999999999888888888887531 0000 000 000 0000000 223567777666
Q ss_pred Hhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHH
Q 043535 588 LKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 588 l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~ 643 (881)
+.++ | +.++++||+.||++|++.||++++|+ +.+..+..||+++.++++..+..
T Consensus 151 ~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 151 IAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred HHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 5543 3 46999999999999999999999997 55777889999998877776653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=99.07 Aligned_cols=109 Identities=12% Similarity=0.161 Sum_probs=88.5
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHH----H
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVK----C 587 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~----~ 587 (881)
..+++.+++++|+++|++++++||++...+..+.+++|+.. .|....| |.+.++ .
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------~~~~~kp--~~~~~~~~~~~ 95 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-------------------IYTGSYK--KLEIYEKIKEK 95 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE-------------------EEECC----CHHHHHHHHHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh-------------------hccCCCC--CHHHHHHHHHH
Confidence 35678999999999999999999999999999999999975 4433223 333333 3
Q ss_pred HhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHH
Q 043535 588 LKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 588 l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
+.-..+.++++||+.||++|.+.||+++++. ++.+..++.||+++.+.+..++.
T Consensus 96 ~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 96 YSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 3323457899999999999999999999998 78888889999999988877776
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=7.2e-09 Score=103.38 Aligned_cols=105 Identities=17% Similarity=0.222 Sum_probs=86.2
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc-C---CE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK-G---HV 594 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~-g---~~ 594 (881)
++++|+++|++++++||++...+..+++++|+.. +|... ..|...++.+.++ | +.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-------------------~~~~~--kpk~~~~~~~~~~~g~~~~~ 119 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-------------------LYQGQ--SNKLIAFSDLLEKLAIAPEN 119 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-------------------EECSC--SCSHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-------------------eecCC--CCCHHHHHHHHHHcCCCHHH
Confidence 8999999999999999999999999999999986 45443 3345555554433 3 57
Q ss_pred EEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHH-HHH
Q 043535 595 VAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAV-TLL 645 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~-~~i 645 (881)
++++||+.||++|++.||++++++ ++.+.++..||+++.+.+..+++ +++
T Consensus 120 ~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l 170 (188)
T 2r8e_A 120 VAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVC 170 (188)
T ss_dssp EEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHH
Confidence 999999999999999999999998 77888888999999987666666 444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.83 E-value=8.6e-09 Score=112.71 Aligned_cols=139 Identities=15% Similarity=0.216 Sum_probs=98.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh------hhc--CC-----------HHHHH-------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE------FRN--YT-----------EEEKM------- 564 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~------~~~--~~-----------~~~~~------- 564 (881)
.+++++.++++.|++ |+++.++||+....+...++.+++.... .+. .. ++.+.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l 181 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 181 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHHHH
Confidence 468999999999999 9999999999977777777888873210 000 00 01111
Q ss_pred HHHhh-------heee---eccCHHHHHHHHHHHhhcC--CEEEEEcCCccCHHHHHhC----CccEeeCCCCcHHHHhh
Q 043535 565 EKVEK-------IYVM---ARASPDDKLAMVKCLKLKG--HVVAVTGNGIKDAPALEEA----NVGLSMGIQGTAVAKES 628 (881)
Q Consensus 565 ~~~~~-------~~v~---~~~~p~~K~~~v~~l~~~g--~~v~~iGDg~ND~~~l~~A----~vgIam~~~~~~~a~~~ 628 (881)
+.+.+ ..+. .-..+.+|...++.+.... +.|+++|||.||++|++.| |+|||| |+.+.+++.
T Consensus 182 ~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~~ 259 (332)
T 1y8a_A 182 RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKH 259 (332)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTT
T ss_pred HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHhh
Confidence 11111 0011 1123567988888665442 4589999999999999999 999999 789999999
Q ss_pred cCeeeccCCchHHHHHHH----HhHHHH
Q 043535 629 SDIIILDDNFATAVTLLN----WGRCVY 652 (881)
Q Consensus 629 ad~vl~~~~~~~i~~~i~----~gR~~~ 652 (881)
||+++.+++.+++.++++ .||..+
T Consensus 260 Ad~v~~~~~~dGV~~~l~~~~~~~~~~~ 287 (332)
T 1y8a_A 260 ADVVIISPTAMSEAKVIELFMERKERAF 287 (332)
T ss_dssp CSEEEECSSTHHHHHHHHHHHHHGGGGG
T ss_pred CcEEecCCCCCHHHHHHHHHHHcCCchh
Confidence 999999999988877654 466554
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.79 E-value=6e-09 Score=112.82 Aligned_cols=115 Identities=18% Similarity=0.277 Sum_probs=96.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec---------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR--------------- 575 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~--------------- 575 (881)
++.|++.+.++.|+++|+++.++||.....+..+++++|+.. .|+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~-------------------~f~~~l~~~dg~~tg~i~~ 239 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY-------------------AFSNTVEIRDNVLTDNITL 239 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-------------------EEEECEEEETTEEEEEECS
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe-------------------EEEEEEEeeCCeeeeeEec
Confidence 488999999999999999999999999999999999999975 2221
Q ss_pred --cCHHHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 576 --ASPDDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 576 --~~p~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
..++.|.++++.+.++ .+.++|+||+.||++|.+.||+|+++ ++.+..++.||.++..+++..+..+++
T Consensus 240 ~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~--~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 240 PIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW--KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred ccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 1345676666655443 35799999999999999999999999 467888899999999889988876654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.77 E-value=9.3e-09 Score=108.95 Aligned_cols=67 Identities=21% Similarity=0.237 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ | +.++++||+.||.+|++.|++|++|+ |+.+.+++.||+++.+++.+++.+++++
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 577777766654 2 46899999999999999999999999 8999999999999999888999987763
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.73 E-value=7.3e-08 Score=102.98 Aligned_cols=66 Identities=23% Similarity=0.308 Sum_probs=55.9
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 581 KLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 581 K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
|...++.+.++ .+.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 217 K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 217 KGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 55555555543 236899999999999999999999998 8999999999999999999999988763
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.9e-08 Score=104.39 Aligned_cols=129 Identities=12% Similarity=0.211 Sum_probs=91.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--ch---------hh-------h--cC------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL--KP---------EF-------R--NY------------ 558 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~--~~---------~~-------~--~~------------ 558 (881)
.+.+.+.++|++|+++| +++++|||+...+..+.+.+ .. .. +. . .+
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 57789999999999999 99999999999998887654 20 00 00 0 00
Q ss_pred -------------------------CHH---HHHHHHh---hhee-----eeccCHH--HHHHHHHHHhhcCCEEEEEcC
Q 043535 559 -------------------------TEE---EKMEKVE---KIYV-----MARASPD--DKLAMVKCLKLKGHVVAVTGN 600 (881)
Q Consensus 559 -------------------------~~~---~~~~~~~---~~~v-----~~~~~p~--~K~~~v~~l~~~g~~v~~iGD 600 (881)
.++ .+.+.+. +..+ +..+.|. +|+..++.+.++-. |+++||
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~GD 179 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAGD 179 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEES
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEeC
Confidence 000 0111111 1111 1122232 68888888887733 899999
Q ss_pred CccCHHHHHhC--CccEeeCCCCcHHHHhhcCeeecc-CCchHHHHHHHH
Q 043535 601 GIKDAPALEEA--NVGLSMGIQGTAVAKESSDIIILD-DNFATAVTLLNW 647 (881)
Q Consensus 601 g~ND~~~l~~A--~vgIam~~~~~~~a~~~ad~vl~~-~~~~~i~~~i~~ 647 (881)
+.||.+||+.| ++||||+ |+ ++.||+++.+ ++.+++.++|++
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 99999999999 9999999 77 6789999988 778888887753
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.68 E-value=5e-08 Score=104.97 Aligned_cols=67 Identities=19% Similarity=0.235 Sum_probs=56.3
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeec-cCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIIL-DDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~-~~~~~~i~~~i~~ 647 (881)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+ |+.+.+++.||+++. +++.+++.++|++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 455666665543 2 36899999999999999999999999 899999999999999 9999999988763
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2e-08 Score=104.66 Aligned_cols=67 Identities=10% Similarity=0.075 Sum_probs=57.6
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhh-------cCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKES-------SDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~-------ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ | +.++++||+.||.+|++.|++|++|+ |+.+.+++. ||+++.+++.+++.+++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 577777777655 2 46899999999999999999999998 899999986 8899999999999988764
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=6.8e-08 Score=101.49 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhhc-C-----CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 579 DDKLAMVKCLKLK-G-----HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 579 ~~K~~~v~~l~~~-g-----~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
..|...++.+.++ | ..++++||+.||.+|++.|++|++|+ |+.+ + .+++++.+++.+++.+++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 4678888887765 3 67999999999999999999999999 8888 4 78999999988998887754
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.64 E-value=1.6e-07 Score=99.11 Aligned_cols=66 Identities=27% Similarity=0.353 Sum_probs=57.0
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.|...++.+.++ .+.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.++++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 577777666654 246899999999999999999999999 899999999999999988999998775
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.5e-08 Score=101.22 Aligned_cols=119 Identities=19% Similarity=0.298 Sum_probs=89.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
++.|++.+.++.|++.|+++.++|+.....+..+ +.+|+... ....... .....-....|..|...++.+
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~k~~~l~~l-- 148 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFE------DGKFQGIRLRFRDKGEFLKRF-- 148 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEE------TTEEEEEECCSSCHHHHHGGG--
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEee------CCceECCcCCccCHHHHHHhc--
Confidence 7899999999999999999999999998888888 88887541 0000000 000000234557799888888
Q ss_pred cCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 591 KGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
..+.++++||+.||++|++.||+|++|+ ++.+ .||+++.+ +..+.++++
T Consensus 149 ~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~~--~~el~~~l~ 197 (201)
T 4ap9_A 149 RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVKD--LKELVDFIK 197 (201)
T ss_dssp TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEESS--HHHHHHHHH
T ss_pred CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEcc--HHHHHHHHH
Confidence 5567889999999999999999999998 6665 79999874 555665553
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2.7e-07 Score=92.89 Aligned_cols=126 Identities=13% Similarity=0.044 Sum_probs=93.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh-cCCHHHHHHHHhhheeee--ccCHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR-NYTEEEKMEKVEKIYVMA--RASPDDKLAMVKC 587 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~~~~~~~v~~--~~~p~~K~~~v~~ 587 (881)
++.|++.+.++.|+++ +++.++|+.....+..+.+.+|+... +. .... ........ .-.|+.|...++.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~-f~~~~~~------~~~~~~~~~~~p~p~~~~~~l~~ 140 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEI------DDSDRVVGYQLRQKDPKRQSVIA 140 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE-EEEEEEE------CTTSCEEEEECCSSSHHHHHHHH
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce-ecceeEE------cCCceEEeeecCCCchHHHHHHH
Confidence 5789999999999999 99999999999999999999998751 10 0000 00000000 1457789999999
Q ss_pred HhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 588 LKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 588 l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
+...+..++++||+.||++|.+.||+++++. +.+..+..++.++.-+++..+.+++.
T Consensus 141 l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 141 FKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHTTCEEEEEECSSTTHHHHHHSSEEEEES--CCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred HHhcCCEEEEEeCChhhHHHHHhcCccEEEC--CcHHHHHHHhhhccccchHHHHHHHH
Confidence 9888889999999999999999999999985 34555555544433356778776653
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=6.3e-08 Score=97.49 Aligned_cols=123 Identities=16% Similarity=0.133 Sum_probs=91.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc------CHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA------SPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~------~p~~K~~~ 584 (881)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.. .+. ...+++.- .|+--..+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~------------~~~i~~~~~~~~kp~~~~~~~~ 136 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD-CFA------------EADVLGRDEAPPKPHPGGLLKL 136 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GSC------------GGGEECTTTSCCTTSSHHHHHH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh-hcC------------cceEEeCCCCCCCCCHHHHHHH
Confidence 457899999999999999999999999999999999999854 110 00122221 12222233
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCc-cEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANV-GLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGR 649 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR 649 (881)
.+.+.-..+.++++||+.||+.|.+.||+ +|+|+ ++.+..+..||+++. ++..+.+.+...|
T Consensus 137 ~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~~~~~ 199 (205)
T 3m9l_A 137 AEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLLSAEG 199 (205)
T ss_dssp HHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHHHHTT
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHHHhcc
Confidence 33333334679999999999999999999 99999 777778888999986 4778887776644
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1.1e-07 Score=97.72 Aligned_cols=123 Identities=25% Similarity=0.359 Sum_probs=91.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ++ ..+.+ .-.|+--..+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~-------------~~~~~~~~~~~kp~~~~~~~~ 169 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTR-LT-------------VIAGDDSVERGKPHPDMALHV 169 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGT-CS-------------EEECTTTSSSCTTSSHHHHHH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhh-ee-------------eEEeCCCCCCCCCCHHHHHHH
Confidence 4678999999999999999999999999999999999987541 11 00111 1122333344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCc---cEeeCCCCcHHHHh-hcCeeeccCCchHHHHHHHHhH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANV---GLSMGIQGTAVAKE-SSDIIILDDNFATAVTLLNWGR 649 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~a~~-~ad~vl~~~~~~~i~~~i~~gR 649 (881)
.+.+.-..+.++++||+.||+.|.+.||+ +|+++.+..+..+. .||+++. ++..+.++++.|+
T Consensus 170 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~~~ 236 (237)
T 4ex6_A 170 ARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHHC-
T ss_pred HHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHccC
Confidence 44444445679999999999999999999 99998444455555 7999986 4888888887664
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.56 E-value=8.2e-08 Score=100.96 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=56.8
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ .+.++++||+.||.+|++.|++|++|+ |+.+..+..||+++.+++.+++.+++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 466666666544 346899999999999999999999998 8999999999999998888889987753
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.1e-07 Score=94.00 Aligned_cols=126 Identities=17% Similarity=0.154 Sum_probs=87.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc--C--CHHHHHHHHhhheeeeccCHHHHHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN--Y--TEEEKMEKVEKIYVMARASPDDKLAMVKC 587 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~--~--~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 587 (881)
+.|++.+.++.|+++|+++.++|+.....+..+.+.+|+....+-. . ..+. ... .......+|..|.+.+..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~l~~ 158 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDG---SFK-ELDNSNGACDSKLSAFDK 158 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTS---BEE-EEECTTSTTTCHHHHHHH
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCC---cee-ccCCCCCCcccHHHHHHH
Confidence 7899999999999999999999999999999999999996311000 0 0000 000 001122334556666655
Q ss_pred H-hhcCCEEEEEcCCccCHHHHHh----CCccEeeCCCCcHHHHhhcCeeeccCCchHHHHH
Q 043535 588 L-KLKGHVVAVTGNGIKDAPALEE----ANVGLSMGIQGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 588 l-~~~g~~v~~iGDg~ND~~~l~~----A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
. .-..+.++++||+.||++|++. +.++++++ ++.+..+..||+++.+ +..+.++
T Consensus 159 ~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~--~~el~~~ 217 (219)
T 3kd3_A 159 AKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARN--VAELASL 217 (219)
T ss_dssp HGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESS--HHHHHHH
T ss_pred HhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCC--HHHHHHh
Confidence 4 4456889999999999999975 45566666 6778888999999864 5555543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.51 E-value=5.4e-07 Score=95.50 Aligned_cols=136 Identities=12% Similarity=0.037 Sum_probs=74.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc-h-------hh--h--------------cCCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK-P-------EF--R--------------NYTEEEKMEK 566 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~-------~~--~--------------~~~~~~~~~~ 566 (881)
.+.+.+.++|++|+++|++++++|||+...+..+.+++|+.. + .+ . .++.+...+.
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i 105 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLV 105 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHH
Confidence 455778999999999999999999999999999999998864 2 00 0 1122211110
Q ss_pred ---Hhh---h----------------------------------eeeeccCHH---------------------------
Q 043535 567 ---VEK---I----------------------------------YVMARASPD--------------------------- 579 (881)
Q Consensus 567 ---~~~---~----------------------------------~v~~~~~p~--------------------------- 579 (881)
+.+ . .+.....++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~ 185 (275)
T 1xvi_A 106 LNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLD 185 (275)
T ss_dssp HHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEE
T ss_pred HHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEec
Confidence 000 0 000011111
Q ss_pred ---HHHHHHHHHhhc-C----CE--EEEEcCCccCHHHHHhCCccEeeCCCCc---HHHHhh--cC-eeeccCCchHHHH
Q 043535 580 ---DKLAMVKCLKLK-G----HV--VAVTGNGIKDAPALEEANVGLSMGIQGT---AVAKES--SD-IIILDDNFATAVT 643 (881)
Q Consensus 580 ---~K~~~v~~l~~~-g----~~--v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~--ad-~vl~~~~~~~i~~ 643 (881)
.|...++.+.++ | +. ++++||+.||.+|++.|++||+|+ |+. +.+++. || +++.+++.+++.+
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~ 264 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWRE 264 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC---------------------------
T ss_pred CCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHH
Confidence 355555555432 2 35 899999999999999999999999 887 556553 79 8998889999988
Q ss_pred HHHH
Q 043535 644 LLNW 647 (881)
Q Consensus 644 ~i~~ 647 (881)
++++
T Consensus 265 ~l~~ 268 (275)
T 1xvi_A 265 GLDH 268 (275)
T ss_dssp ----
T ss_pred HHHH
Confidence 7753
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.46 E-value=2.1e-07 Score=97.12 Aligned_cols=55 Identities=24% Similarity=0.131 Sum_probs=46.7
Q ss_pred HHHHHHHHHhhc-----CCEEEEEcCCccCHHHHHhCCccEeeCCCCc-HHHHhhcCeeecc
Q 043535 580 DKLAMVKCLKLK-----GHVVAVTGNGIKDAPALEEANVGLSMGIQGT-AVAKESSDIIILD 635 (881)
Q Consensus 580 ~K~~~v~~l~~~-----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~-~~a~~~ad~vl~~ 635 (881)
.|+..++.+.++ .+.|+++||+.||.+||+.|++||||+ |+. +..++.||+++.+
T Consensus 179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred ChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 588888877654 357999999999999999999999999 887 6788889988764
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.41 E-value=4.1e-07 Score=93.25 Aligned_cols=118 Identities=14% Similarity=0.128 Sum_probs=78.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHH------HHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK------LAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K------~~~ 584 (881)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+... ++. .+.+...+..| ..+
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~-f~~-------------i~~~~~~~~~Kp~~~~~~~~ 155 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDD-FHA-------------IVDPTTLAKGKPDPDIFLTA 155 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTT-CSE-------------ECCC---------CCHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhh-cCE-------------EeeHhhCCCCCCChHHHHHH
Confidence 3688999999999999999999999855 7778888888641 110 01111112222 344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.+.+.-..+.++++||+.||+.|.+.||++++|. ++.+..+ .||+++.+.+...+..+++
T Consensus 156 ~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 156 AAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp HHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHHHHHH
T ss_pred HHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHHHHHH
Confidence 4444444567999999999999999999999998 6666666 8999998766555554444
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.40 E-value=1e-06 Score=90.43 Aligned_cols=105 Identities=16% Similarity=0.125 Sum_probs=74.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheee-eccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVM-ARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~-~~~~p~~K~~~v~~l~ 589 (881)
.+.|++.+.++.|+++|+++.++||.....+..+++.+|+..- +..... ..+-....... ....+..|.+.++.+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~-~~~~~~--~~~~~~~g~~~~~~~~~~~K~~~~~~~~ 168 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL-IATDPE--YRDGRYTGRIEGTPSFREGKVVRVNQWL 168 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE-EECEEE--EETTEEEEEEESSCSSTHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE-EEcceE--EECCEEeeeecCCCCcchHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999731 000000 00000000000 1122456777766554
Q ss_pred h-cC------CEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 590 L-KG------HVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 590 ~-~g------~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
+ .| +.++++||+.||++|++.||+++++.
T Consensus 169 ~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 169 AGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp HHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred HHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 3 34 68999999999999999999999995
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.40 E-value=3.5e-07 Score=93.22 Aligned_cols=121 Identities=13% Similarity=0.130 Sum_probs=88.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC--HHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS--PDDKLAMVKC 587 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~~v~~ 587 (881)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ++ ..+.+... ...|.+.++.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-f~-------------~~~~~~~~~~~kp~~~~~~~ 150 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFY-FD-------------AIVGSSLDGKLSTKEDVIRY 150 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGG-CS-------------EEEEECTTSSSCSHHHHHHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhh-ee-------------eeeccCCCCCCCCCHHHHHH
Confidence 35789999999999999999999999999999999999998641 11 01122211 1224444444
Q ss_pred Hhh----cCCEEEEEcCCccCHHHHHhCCc---cEeeCCCCcH-HH-HhhcCeeeccCCchHHHHHHHH
Q 043535 588 LKL----KGHVVAVTGNGIKDAPALEEANV---GLSMGIQGTA-VA-KESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 588 l~~----~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~-~a-~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
+.+ ..+.++++||+.||+.|.+.||+ ++++| ++.. .. +..||+++. ++..+.+++..
T Consensus 151 ~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 151 AMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred HHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 333 34579999999999999999999 88888 5443 33 578999996 47777776654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.40 E-value=2.2e-07 Score=99.27 Aligned_cols=132 Identities=14% Similarity=0.097 Sum_probs=89.1
Q ss_pred CCCccHHHHHHHHHhC-CCEEEEEcCC---------------------CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYA-GVNIKMITGD---------------------NIFTAKAIATQCGILKPEFRNYTEEEKMEKVE 568 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~-Gi~v~~~TGd---------------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~ 568 (881)
..++++.+.++.+++. |+++.+.|.. ....+..+.+..|+... +....+. ..-.
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~---~~~~ 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN-INRCNPL---AGDP 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE-EEECCGG---GTCC
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE-EEEcccc---ccCC
Confidence 3578899999999988 9998888866 23334444444444320 0000000 0000
Q ss_pred hheeeeccCH--HHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHH
Q 043535 569 KIYVMARASP--DDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 569 ~~~v~~~~~p--~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
....+....| ..|...++.+.++ .+.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++..++.
T Consensus 198 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~gv~ 276 (289)
T 3gyg_A 198 EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITDSEYSKGIT 276 (289)
T ss_dssp TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCSSCHHHHHH
T ss_pred CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcCCCCcCHHH
Confidence 0001222222 3577777776654 346899999999999999999999999 89999999999999998888998
Q ss_pred HHHHH
Q 043535 643 TLLNW 647 (881)
Q Consensus 643 ~~i~~ 647 (881)
+++++
T Consensus 277 ~~~~~ 281 (289)
T 3gyg_A 277 NTLKK 281 (289)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87763
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.34 E-value=5e-07 Score=91.66 Aligned_cols=110 Identities=14% Similarity=0.185 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC------HHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS------PDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~------p~~K~~~ 584 (881)
.+.+++.+.++.+++.|++++++|+.....+....+.+|+... +. ..+.+... |+--..+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~-~~-------------~~~~~~~~~~~kp~~~~~~~~ 159 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-FD-------------ALASAEKLPYSKPHPQVYLDC 159 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-CS-------------EEEECTTSSCCTTSTHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhh-Cc-------------EEEeccccCCCCCChHHHHHH
Confidence 4578899999999999999999999999988888888887641 10 01111111 2233344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccEee----CCCCcHHHHhhcCeeecc
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM----GIQGTAVAKESSDIIILD 635 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam----~~~~~~~a~~~ad~vl~~ 635 (881)
.+.+.-..+.++++||+.||++|++.||+++++ + ++.+..+..||+++.+
T Consensus 160 ~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~ 213 (226)
T 1te2_A 160 AAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSS 213 (226)
T ss_dssp HHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSC
T ss_pred HHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECC
Confidence 444443456789999999999999999999998 5 5555668889999875
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.34 E-value=3.8e-07 Score=92.35 Aligned_cols=122 Identities=11% Similarity=0.093 Sum_probs=82.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
.+.+++.+.++.+++.|+++.++|++ ..+..+.+.+|+... ++.. ..+. .-...-.|+--..+.+.+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~-f~~~~~~~~--------~~~~Kp~~~~~~~~~~~lg 159 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY-FDAIADPAE--------VAASKPAPDIFIAAAHAVG 159 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG-CSEECCTTT--------SSSCTTSSHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH-cceEecccc--------CCCCCCChHHHHHHHHHcC
Confidence 35789999999999999999999998 445667777887531 1100 0000 0001111222233333333
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
-..+.++++||+.||++|++.||++++|. ++.+..+ .||+++.+.+..++..++
T Consensus 160 i~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 160 VAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred CChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHHH
Confidence 33467899999999999999999999998 7777777 899999876665555443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.32 E-value=9.8e-07 Score=92.56 Aligned_cols=126 Identities=15% Similarity=0.126 Sum_probs=83.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
.+.+++.+.++.+++.|+++.++|++....+..+.+.+|+...-.+.. ..+ ..-.....|+--..+.+.+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------~~~~~kp~~~~~~~~~~~lg 174 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPD--------DVPAGRPYPWMCYKNAMELG 174 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGG--------GSSCCTTSSHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCC--------ccCCCCCCHHHHHHHHHHhC
Confidence 467899999999999999999999999888888887776543100000 000 00001112333344444444
Q ss_pred hcC-CEEEEEcCCccCHHHHHhCC---ccEeeCCCC------------------------cHHHHhh-cCeeeccCCchH
Q 043535 590 LKG-HVVAVTGNGIKDAPALEEAN---VGLSMGIQG------------------------TAVAKES-SDIIILDDNFAT 640 (881)
Q Consensus 590 ~~g-~~v~~iGDg~ND~~~l~~A~---vgIam~~~~------------------------~~~a~~~-ad~vl~~~~~~~ 640 (881)
-.. +.++++||+.||+.|++.|| ++++++ ++ .+..+.. ||+++. ++..
T Consensus 175 i~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~--~~~e 251 (267)
T 1swv_A 175 VYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIE--TMQE 251 (267)
T ss_dssp CCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEES--SGGG
T ss_pred CCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceecc--CHHH
Confidence 444 67999999999999999999 677777 44 2344444 999985 4667
Q ss_pred HHHHHHH
Q 043535 641 AVTLLNW 647 (881)
Q Consensus 641 i~~~i~~ 647 (881)
+..++..
T Consensus 252 l~~~l~~ 258 (267)
T 1swv_A 252 LESVMEH 258 (267)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766643
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.27 E-value=6.9e-07 Score=91.28 Aligned_cols=122 Identities=19% Similarity=0.063 Sum_probs=87.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc------CHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA------SPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~------~p~~K~~~ 584 (881)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+... ++. .+.+.. .|+--..+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~~-------------~~~~~~~~~~kp~~~~~~~~ 156 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDIN-KIN-------------IVTRDDVSYGKPDPDLFLAA 156 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTT-SSC-------------EECGGGSSCCTTSTHHHHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhh-hhe-------------eeccccCCCCCCChHHHHHH
Confidence 4578999999999999999999999999999999999998751 110 011111 12222233
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCc---cEeeCCCCcHHHHhh-cCeeeccCCchHHHHHHHHh
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANV---GLSMGIQGTAVAKES-SDIIILDDNFATAVTLLNWG 648 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~a~~~-ad~vl~~~~~~~i~~~i~~g 648 (881)
.+.+.-..+.++++||+.||+.|.+.||+ +|+++.+..+..+.. ||+++. ++..+.+.++..
T Consensus 157 ~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~~ 222 (233)
T 3s6j_A 157 AKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDEI 222 (233)
T ss_dssp HHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGGT
T ss_pred HHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHHH
Confidence 33333234679999999999999999999 777765556666665 999986 477888777654
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.25 E-value=1.1e-06 Score=89.56 Aligned_cols=126 Identities=21% Similarity=0.208 Sum_probs=86.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-hhhcCCHHHHHHHHhhheeeecc------CHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-EFRNYTEEEKMEKVEKIYVMARA------SPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-~~~~~~~~~~~~~~~~~~v~~~~------~p~~K~~ 583 (881)
++.|++.+.++.|+++|++++++|+.....+..+.+.+|+... .+...-.- .....+.+.. .+..|.+
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~-----~~~~~~~~~~~~~~~~~~~~Kp~ 160 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF-----YFNGEYAGFDETQPTAESGGKGK 160 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEE-----CTTSCEEEECTTSGGGSTTHHHH
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEE-----cCCCcEecCCCCCcccCCCchHH
Confidence 6889999999999999999999999999999999999999731 11000000 0000001111 1235777
Q ss_pred HHHHHhhc-C-CEEEEEcCCccCHHHHHhCCccEeeCCCC-cHHHHhhcCeeeccCCchHHHH
Q 043535 584 MVKCLKLK-G-HVVAVTGNGIKDAPALEEANVGLSMGIQG-TAVAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 584 ~v~~l~~~-g-~~v~~iGDg~ND~~~l~~A~vgIam~~~~-~~~a~~~ad~vl~~~~~~~i~~ 643 (881)
+++.+.+. | ..++++||+.||+.|.+.||++|+++... .+.....+|+++.+ +..+.+
T Consensus 161 ~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~ 221 (225)
T 1nnl_A 161 VIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVELLG 221 (225)
T ss_dssp HHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGGCC
T ss_pred HHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC--HHHHHH
Confidence 76665543 4 57899999999999999999998887322 23455678998864 554443
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=6.6e-07 Score=85.29 Aligned_cols=143 Identities=13% Similarity=0.155 Sum_probs=84.8
Q ss_pred CccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccC-CCChhhhhhc
Q 043535 324 KTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGM-SMDMEQIRQS 402 (881)
Q Consensus 324 KTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~-~~~~~~~~~~ 402 (881)
..||+|-|++++..+.....-+..+++..+.++. ..+.||+++|++++++ +. +.......+.
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~~e~elL~lAAs~E----------------~~SeHPla~AIv~~A~-~~~~l~~~~~~~~ 75 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGVDEKTLADAAQLAS----------------LADETPEGRSIVILAK-QRFNLRERDVQSL 75 (156)
T ss_dssp --------CEEEEEEEECTTSCHHHHHHHHHHTT----------------SSCCSHHHHHHHHHHH-HHTTCCCCCHHHH
T ss_pred CCCceecCCCeEEEEEecCCCCHHHHHHHHHHHh----------------CcCCCHHHHHHHHHHH-HhcCCCccccccc
Confidence 4799999999999873321112233444333222 1245799999999887 33 4332211000
Q ss_pred ceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhh
Q 043535 403 CVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLA 482 (881)
Q Consensus 403 ~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~ 482 (881)
..+..+|++..+++++.+ ++. -+.+|+++.|.+.+... |. .+ .+.+.+..++++.+|.+++.
T Consensus 76 --~~~~~~F~a~~G~~Gv~v---~G~---~v~vGn~~~i~~l~~~~----gi--~~----~~~~~~~~~~la~~G~T~v~ 137 (156)
T 1svj_A 76 --HATFVPFTAQSRMSGINI---DNR---MIRKGSVDAIRRHVEAN----GG--HF----PTDVDQKVDQVARQGATPLV 137 (156)
T ss_dssp --TCEEEEEETTTTEEEEEE---TTE---EEEEEEHHHHHHHHHHH----TC--CC----CHHHHHHHHHHHHTTCEEEE
T ss_pred --ccceeeccccCCCCeEEE---CCE---EEEEeCcHHHHHHHHHc----CC--CC----cHHHHHHHHHHHhCCCCEEE
Confidence 123568998888788844 443 34679988776665431 11 11 12366778889999999999
Q ss_pred hhhccCCCCcccccccCceeeeeccccCCCCc
Q 043535 483 FAHKQVPVPEEELNEENLILLGLLGIKDPCRP 514 (881)
Q Consensus 483 ~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~ 514 (881)
+| .|..++|++++.|++||
T Consensus 138 VA-------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 138 VV-------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp EE-------------ETTEEEEEEEEEECCCC
T ss_pred EE-------------ECCEEEEEEEEecCCCC
Confidence 99 36789999999999996
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.3e-06 Score=84.04 Aligned_cols=114 Identities=16% Similarity=0.177 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcC--CCchhhhcCCHHHHHHHHhhheee
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNI---------------FTAKAIATQCG--ILKPEFRNYTEEEKMEKVEKIYVM 573 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~v~ 573 (881)
++.|++.+++++|+++|+++.++|+.+. ..+....+.+| +.. ++
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-------------------~~ 87 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA-------------------IF 87 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE-------------------EE
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE-------------------EE
Confidence 5789999999999999999999999986 56677777888 543 22
Q ss_pred -e-----------ccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCc---cEeeCCCCcHHHH----hhcCeeec
Q 043535 574 -A-----------RASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANV---GLSMGIQGTAVAK----ESSDIIIL 634 (881)
Q Consensus 574 -~-----------~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~a~----~~ad~vl~ 634 (881)
+ .-.|+-=..+.+.+.-..+.+++|||+.||+.|.+.||+ +++.| ++..... ..+|+++.
T Consensus 88 ~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v~~ 166 (179)
T 3l8h_A 88 MCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRVCE 166 (179)
T ss_dssp EECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEEES
T ss_pred EcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEEec
Confidence 1 112222234444444445679999999999999999995 66666 4444433 45799887
Q ss_pred cCCchHHHHHHH
Q 043535 635 DDNFATAVTLLN 646 (881)
Q Consensus 635 ~~~~~~i~~~i~ 646 (881)
+ +..+.+.+.
T Consensus 167 ~--l~el~~~l~ 176 (179)
T 3l8h_A 167 D--LAAVAEQLL 176 (179)
T ss_dssp S--HHHHHHHHH
T ss_pred C--HHHHHHHHH
Confidence 4 777776654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.18 E-value=9.5e-07 Score=89.50 Aligned_cols=117 Identities=16% Similarity=0.123 Sum_probs=78.5
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc----CH--HHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA----SP--DDKLAMV 585 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~----~p--~~K~~~v 585 (881)
+.+++.+.++.+++.|+++.++|+..........+.+|+... ++. .+.+.. .| +--..+.
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~-~~~-------------~~~~~~~~~~k~~~~~~~~~~ 155 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDW-FDI-------------IIGGEDVTHHKPDPEGLLLAI 155 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTC-CSE-------------EECGGGCSSCTTSTHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhh-eee-------------eeehhhcCCCCCChHHHHHHH
Confidence 468999999999999999999999999999888888887641 100 011111 11 1122333
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCccEee----CCCCcHHHHhh-cCeeeccCCchHHHHHH
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANVGLSM----GIQGTAVAKES-SDIIILDDNFATAVTLL 645 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam----~~~~~~~a~~~-ad~vl~~~~~~~i~~~i 645 (881)
+.+.-..+.++++||+.||++|++.||++++| + ++.+..+.. ||+++.+ +..+.+.+
T Consensus 156 ~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~~--~~el~~~l 217 (225)
T 3d6j_A 156 DRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIST--LGQLISVP 217 (225)
T ss_dssp HHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEESS--GGGGC---
T ss_pred HHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEECC--HHHHHHhh
Confidence 33332345688999999999999999999887 4 444455554 8999864 44444444
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.16 E-value=7.7e-06 Score=83.47 Aligned_cols=123 Identities=19% Similarity=0.208 Sum_probs=87.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
.+.|++.+.++.|++. +++.++|+.....+....+.+|+... ++.. ..+.. -...-.|+--..+.+.+.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~-f~~~~~~~~~--------~~~kp~~~~~~~~~~~~~ 169 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDL-FDSITTSEEA--------GFFKPHPRIFELALKKAG 169 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGG-CSEEEEHHHH--------TBCTTSHHHHHHHHHHHT
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHH-cceeEecccc--------CCCCcCHHHHHHHHHHcC
Confidence 5679999999999999 99999999999999999999998641 1100 00000 011122333334444444
Q ss_pred hcCCEEEEEcCCc-cCHHHHHhCC---ccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 590 LKGHVVAVTGNGI-KDAPALEEAN---VGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 590 ~~g~~v~~iGDg~-ND~~~l~~A~---vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
-..+.++++||+. ||+.|.+.|| ++++++ ++.+..+..||+++.+ +..+.+++.
T Consensus 170 ~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~--~~el~~~l~ 227 (234)
T 3u26_A 170 VKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSD--LREVIKIVD 227 (234)
T ss_dssp CCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESS--THHHHHHHH
T ss_pred CCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCC--HHHHHHHHH
Confidence 4456799999997 9999999999 577777 6667777799999874 667776654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.9e-06 Score=88.03 Aligned_cols=126 Identities=7% Similarity=0.042 Sum_probs=89.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ++..... ...-...-.|+--..+.+.+.-
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-f~~~~~~-------~~~~~~kp~~~~~~~~~~~~~~ 170 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGL-FDHVLSV-------DAVRLYKTAPAAYALAPRAFGV 170 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTT-CSEEEEG-------GGTTCCTTSHHHHTHHHHHHTS
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhh-cCEEEEe-------cccCCCCcCHHHHHHHHHHhCC
Confidence 4678999999999999999999999999999999999998641 1100000 0000011122233344444444
Q ss_pred cCCEEEEEcCCccCHHHHHhCCccEee----CCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 591 KGHVVAVTGNGIKDAPALEEANVGLSM----GIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~vgIam----~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
..+.++++||+.||+.|.+.||+++++ + ++.+..+..+|+++. ++..+.+++..
T Consensus 171 ~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 171 PAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred CcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 456799999999999999999999999 5 555666778999986 47778777654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.9e-06 Score=85.76 Aligned_cols=113 Identities=13% Similarity=0.177 Sum_probs=80.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~~ 584 (881)
.+.+++.+.++.+++.|++++++|+....... ..+.+|+... ++ ..+.+. ..|+--..+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~-f~-------------~~~~~~~~~~~Kp~~~~~~~~ 149 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY-FT-------------EILTSQSGFVRKPSPEAATYL 149 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG-EE-------------EEECGGGCCCCTTSSHHHHHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh-ee-------------eEEecCcCCCCCCCcHHHHHH
Confidence 36799999999999999999999999988887 8788887541 10 001111 112233344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
.+.+.-..+.++++||+.||++|++.||++ ++|+ ++. . .||+++.+ +..+.+++
T Consensus 150 ~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~~--~~el~~~l 204 (207)
T 2go7_A 150 LDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQA--LADISRIF 204 (207)
T ss_dssp HHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECSS--TTHHHHHT
T ss_pred HHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeCC--HHHHHHHH
Confidence 455544456789999999999999999997 7887 665 3 68998864 44555443
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.11 E-value=2.8e-06 Score=86.51 Aligned_cols=119 Identities=10% Similarity=0.082 Sum_probs=85.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~ 583 (881)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ++. .+.+. -.|+--..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~~-------------~~~~~~~~~~kp~~~~~~~ 160 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNS-FDH-------------LISVDEVRLFKPHQKVYEL 160 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGG-CSE-------------EEEGGGTTCCTTCHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhh-cce-------------eEehhhcccCCCChHHHHH
Confidence 35788999999999999999999999999999999999998641 110 01111 12222333
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCC---CCcHHHHhhcCeeeccCCchHHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGI---QGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~---~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
+.+.+.-..+.++++||+.||+.|.+.||+++++.. ++.+..+..+|+++.+ +..+.+.
T Consensus 161 ~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~ 222 (230)
T 3um9_A 161 AMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSD--VGVLASR 222 (230)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESS--HHHHHHT
T ss_pred HHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCC--HHHHHHH
Confidence 444444335679999999999999999999999831 4445556789999874 5666544
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.11 E-value=2.5e-06 Score=87.83 Aligned_cols=117 Identities=15% Similarity=0.156 Sum_probs=83.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH--HHHHHH----
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP--DDKLAM---- 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~---- 584 (881)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ++ ..+.+...+ ..|.+.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~-------------~~~~~~~~~~~kp~~~~~~~~ 175 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRY-FK-------------YIAGSNLDGTRVNKNEVIQYV 175 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG-CS-------------EEEEECTTSCCCCHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhh-EE-------------EEEeccccCCCCCCHHHHHHH
Confidence 4689999999999999999999999999999999999998641 11 011122111 123333
Q ss_pred HHHHhhc-CCEEEEEcCCccCHHHHHhCCc---cEeeCCCCcHH--HHhhcCeeeccCCchHHHHH
Q 043535 585 VKCLKLK-GHVVAVTGNGIKDAPALEEANV---GLSMGIQGTAV--AKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 585 v~~l~~~-g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~--a~~~ad~vl~~~~~~~i~~~ 644 (881)
.+.+.-. .+.++++||+.||+.|.+.||+ +++++ ++... .+..||+++.+ +..+.++
T Consensus 176 ~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~~--~~el~~~ 238 (240)
T 3sd7_A 176 LDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG-YGSFEEISESEPTYIVEN--VESIKDI 238 (240)
T ss_dssp HHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SCCHHHHHHHCCSEEESS--STTHHHH
T ss_pred HHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC-CCCHHHHhhcCCCEEECC--HHHHHHH
Confidence 3444434 5578999999999999999999 77777 44433 25789999875 5555544
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.11 E-value=5.8e-06 Score=84.32 Aligned_cols=124 Identities=10% Similarity=0.068 Sum_probs=82.2
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDN---IFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKC 587 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 587 (881)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+... ++.. ..++. -...-.|+--..+.+.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~-f~~~~~~~~~--------~~~kp~~~~~~~~~~~ 170 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF-IDKTFFADEV--------LSYKPRKEMFEKVLNS 170 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG-CSEEEEHHHH--------TCCTTCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH-hhhheecccc--------CCCCCCHHHHHHHHHH
Confidence 47899999999999999999999999 8888888899887641 1100 00000 0011122222233333
Q ss_pred HhhcCCEEEEEcCCc-cCHHHHHhCCccEeeCC--CCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 588 LKLKGHVVAVTGNGI-KDAPALEEANVGLSMGI--QGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 588 l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~--~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
+.-..+.++++||+. ||+.|.+.||++++|-. ++.+..+..+|+++. ++..+.+++.
T Consensus 171 lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 171 FEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp TTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred cCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHHHHHHH
Confidence 333346799999999 99999999999999831 333344456888875 4666665553
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.04 E-value=9.4e-06 Score=82.84 Aligned_cols=111 Identities=13% Similarity=0.137 Sum_probs=75.2
Q ss_pred CCCccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc---CHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYA-GVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA---SPDDKLAMVK 586 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~---~p~~K~~~v~ 586 (881)
.+.|++.+.++.|++. |+++.++|+.....+....+.+|+... ++. .++... .+.-+..+.+
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-f~~-------------~~~~~~~~~~~k~~~~~~~ 158 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY-FPF-------------GAFADDALDRNELPHIALE 158 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT-CSC-------------EECTTTCSSGGGHHHHHHH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhh-cCc-------------ceecCCCcCccchHHHHHH
Confidence 3679999999999999 999999999999999999999998641 110 011111 1112233333
Q ss_pred H-HhhcC-----CEEEEEcCCccCHHHHHhCCc---cEeeCCCCcHHHH-h-hcCeeeccC
Q 043535 587 C-LKLKG-----HVVAVTGNGIKDAPALEEANV---GLSMGIQGTAVAK-E-SSDIIILDD 636 (881)
Q Consensus 587 ~-l~~~g-----~~v~~iGDg~ND~~~l~~A~v---gIam~~~~~~~a~-~-~ad~vl~~~ 636 (881)
. +++.| +.++++||+.||+.|.+.||+ +++++ ++..... . .+|+++.+.
T Consensus 159 ~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~~~ 218 (234)
T 2hcf_A 159 RARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFKNF 218 (234)
T ss_dssp HHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEESCS
T ss_pred HHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeCCH
Confidence 2 22223 578999999999999999994 45555 3333333 2 389998753
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.03 E-value=6.7e-06 Score=83.97 Aligned_cols=116 Identities=14% Similarity=0.177 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc------CHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA------SPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~------~p~~K~~~ 584 (881)
.+.+++.+.++.|++.|+++.++|+.....+....+.+|+... ++ ..+.+.. .|+--..+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-f~-------------~i~~~~~~~~~Kp~~~~~~~~ 168 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHY-FD-------------SIIGSGDTGTIKPSPEPVLAA 168 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG-CS-------------EEEEETSSSCCTTSSHHHHHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhh-ee-------------eEEcccccCCCCCChHHHHHH
Confidence 4688999999999999999999999999999999999998641 11 0112211 22223444
Q ss_pred HHHHhhcCC-EEEEEcCCccCHHHHHhCCc-cEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 585 VKCLKLKGH-VVAVTGNGIKDAPALEEANV-GLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 585 v~~l~~~g~-~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.+.+.-..+ .++++||+.||+.|.+.||+ +|.++ ++.+ ..+|+++. ++..+.+++.
T Consensus 169 ~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 169 LTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp HHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred HHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 445544455 79999999999999999997 67776 5544 35677765 4667766553
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.02 E-value=6.9e-06 Score=85.01 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ++.. ..+ ......-.|+--..+.+.+.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~-f~~~~~~~--------~~~~~Kp~~~~~~~~~~~~~ 184 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL-FSEMLGGQ--------SLPEIKPHPAPFYYLCGKFG 184 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-CSEEECTT--------TSSSCTTSSHHHHHHHHHHT
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe-EEEEEecc--------cCCCCCcCHHHHHHHHHHhC
Confidence 5678999999999999999999999999999999999998641 1100 000 00001112233334445554
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEe-eCCC----CcHHHHhhcCeeeccCCchHHH
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLS-MGIQ----GTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIa-m~~~----~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
-..+.++++||+.||++|.+.||+++. +. . +.+..+..+|+++.+ +..+.
T Consensus 185 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~ad~vi~~--~~el~ 239 (243)
T 2hsz_A 185 LYPKQILFVGDSQNDIFAAHSAGCAVVGLT-YGYNYNIPIAQSKPDWIFDD--FADIL 239 (243)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEES-SSCSTTCCGGGGCCSEEESS--GGGGG
T ss_pred cChhhEEEEcCCHHHHHHHHHCCCeEEEEc-CCCCchhhhhhCCCCEEECC--HHHHH
Confidence 445679999999999999999999844 33 2 233456779999864 44443
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.01 E-value=9.5e-06 Score=85.17 Aligned_cols=121 Identities=16% Similarity=0.066 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~~ 584 (881)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+....++ ..+.+. -.|+--..+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~-------------~~~~~~~~~~~kp~~~~~~~~ 177 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA-------------STVFATDVVRGRPFPDMALKV 177 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS-------------EEECGGGSSSCTTSSHHHHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc-------------eEecHHhcCCCCCCHHHHHHH
Confidence 5678999999999999999999999999988888888776531010 001111 112222344
Q ss_pred HHHHhhcC-CEEEEEcCCccCHHHHHhCC---ccEeeCCC-----------------------CcHHHHh-hcCeeeccC
Q 043535 585 VKCLKLKG-HVVAVTGNGIKDAPALEEAN---VGLSMGIQ-----------------------GTAVAKE-SSDIIILDD 636 (881)
Q Consensus 585 v~~l~~~g-~~v~~iGDg~ND~~~l~~A~---vgIam~~~-----------------------~~~~a~~-~ad~vl~~~ 636 (881)
.+.+.-.. +.+++|||+.||+.|.+.|| ++|++|.+ +.+..+. .+|+++.+
T Consensus 178 ~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~- 256 (277)
T 3iru_A 178 ALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDS- 256 (277)
T ss_dssp HHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESS-
T ss_pred HHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecC-
Confidence 44444445 78999999999999999999 45666632 1234444 49999974
Q ss_pred CchHHHHHHH
Q 043535 637 NFATAVTLLN 646 (881)
Q Consensus 637 ~~~~i~~~i~ 646 (881)
+..+.+++.
T Consensus 257 -~~el~~~l~ 265 (277)
T 3iru_A 257 -VADLETVIT 265 (277)
T ss_dssp -GGGTHHHHH
T ss_pred -HHHHHHHHH
Confidence 666666654
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.8e-05 Score=80.11 Aligned_cols=134 Identities=15% Similarity=0.171 Sum_probs=80.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHcCCCchhhhcCC--HHHHHHHHhhheee
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN---------------IFTAKAIATQCGILKPEFRNYT--EEEKMEKVEKIYVM 573 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~--~~~~~~~~~~~~v~ 573 (881)
++.|++.+++++|+++|+++.++|+.. ...+..+.+++|+.....-... .+............
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~~~~~~~~~~~~~~~ 129 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC 129 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcCCCCcccccCccCcC
Confidence 678999999999999999999999999 4677778888887511000000 00000000000001
Q ss_pred eccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc--Eee--CCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 574 ARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG--LSM--GIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 574 ~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam--~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.+-.|+--..+.+.+.-..+.++||||+.||+.|.+.||+. |.+ +....+.....+|+++.+ +..+.+++.
T Consensus 130 ~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~--l~el~~~l~ 204 (211)
T 2gmw_A 130 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLPQAIK 204 (211)
T ss_dssp STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCC--HHHHHHHHH
Confidence 11223333344444444456789999999999999999964 343 322223334568998864 667766553
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.01 E-value=1e-05 Score=83.38 Aligned_cols=121 Identities=15% Similarity=0.164 Sum_probs=78.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~ 583 (881)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.. .+.. +..+.+ ...|+--..
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~-----------~~~~~~~~~~~~kp~~~~~~~ 173 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPG-IFQA-----------NLMVTAFDVKYGKPNPEPYLM 173 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTT-TCCG-----------GGEECGGGCSSCTTSSHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHH-hcCC-----------CeEEecccCCCCCCCCHHHHH
Confidence 35679999999999999999999999998877777777 7764 1100 001111 112222334
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcHH----HHhhcCeeeccCCchHHHHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTAV----AKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~----a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
+.+.+.-..+.++++||+.||+.|.+.||++ +++. ++... .+..||+++.+ +..+.+++.
T Consensus 174 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 238 (247)
T 3dv9_A 174 ALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFHS--MPDFNKNWE 238 (247)
T ss_dssp HHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEESS--HHHHHHHHH
T ss_pred HHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 4444444456799999999999999999975 4443 33222 22379999874 666665554
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.00 E-value=5.4e-06 Score=83.02 Aligned_cols=111 Identities=13% Similarity=0.120 Sum_probs=81.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.+++.+.++.|++.|++++++|+.....+....+.+|+... ++ ..+.+ .-.|+--..+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~-------------~~~~~~~~~~~kp~~~~~~~~ 154 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGF-FD-------------IVLSGEEFKESKPNPEIYLTA 154 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-CS-------------EEEEGGGCSSCTTSSHHHHHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhh-ee-------------eEeecccccCCCCChHHHHHH
Confidence 3678999999999999999999999999999999999998641 11 00111 1122233444
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCC-cHHHHhhcCeeecc
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG-TAVAKESSDIIILD 635 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~-~~~a~~~ad~vl~~ 635 (881)
.+.+.-..+.++++||+.||+.|.+.||+++++..++ ....+..||+++.+
T Consensus 155 ~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~ 206 (214)
T 3e58_A 155 LKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS 206 (214)
T ss_dssp HHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS
T ss_pred HHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH
Confidence 4444444567999999999999999999988876332 33344778999864
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=7.5e-06 Score=86.69 Aligned_cols=117 Identities=10% Similarity=-0.027 Sum_probs=82.8
Q ss_pred CCCCccHHHHHHHHHhCCC--EEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGV--NIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDK 581 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi--~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K 581 (881)
-++.|++.+.++.|++.|+ +++++|+.....+....+.+|+... ++ ..+.+. ..+..|
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~-fd-------------~v~~~~~~~~~~~~~Kp~ 206 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADL-FD-------------GLTYCDYSRTDTLVCKPH 206 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTS-CS-------------EEECCCCSSCSSCCCTTS
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccc-cc-------------eEEEeccCCCcccCCCcC
Confidence 3578999999999999999 9999999999999999999998641 11 001111 111223
Q ss_pred HHHHH----HHhhcC-CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHH------HhhcCeeeccCCchHHHH
Q 043535 582 LAMVK----CLKLKG-HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVA------KESSDIIILDDNFATAVT 643 (881)
Q Consensus 582 ~~~v~----~l~~~g-~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a------~~~ad~vl~~~~~~~i~~ 643 (881)
.++++ .+.-.. +.++++||+.||+.|.+.||+|.+|+ ++.... ...||+++.+ +..+.+
T Consensus 207 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~ad~vi~s--l~el~~ 276 (282)
T 3nuq_A 207 VKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH-LVENEVNEILGQTPEGAIVISD--ILELPH 276 (282)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE-ECSCCC----CCCCTTCEEESS--GGGGGG
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE-EcCCccccccccCCCCCEEeCC--HHHHHH
Confidence 44443 333334 78999999999999999999998887 443322 3378898864 544443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.98 E-value=4e-06 Score=92.71 Aligned_cols=105 Identities=14% Similarity=0.114 Sum_probs=71.5
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc----hhhhcCCHHHHHHHHhhheeeec-------cCH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK----PEFRNYTEEEKMEKVEKIYVMAR-------ASP 578 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~----~~~~~~~~~~~~~~~~~~~v~~~-------~~p 578 (881)
..+.|++.+.|+.|+++|++|+|+||.....+..+|+++|+.. ..+-...-+ . -.+-.+-.+ +..
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~-~---~~dG~~tg~~~~~~p~~~~ 295 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLM-K---DDEGKILPKFDKDFPISIR 295 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEE-E---CTTCCEEEEECTTSCCCST
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEE-E---ecCCceeeeecCccceeCC
Confidence 3578999999999999999999999999999999999998632 110000000 0 000001111 235
Q ss_pred HHHHHHHHHHhhc--C-CEEEEEcCCccCHHHHHh-CCccEeeC
Q 043535 579 DDKLAMVKCLKLK--G-HVVAVTGNGIKDAPALEE-ANVGLSMG 618 (881)
Q Consensus 579 ~~K~~~v~~l~~~--g-~~v~~iGDg~ND~~~l~~-A~vgIam~ 618 (881)
+.|...++.+... | ..++++|||.||.+||+. +|.++++.
T Consensus 296 ~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~li 339 (385)
T 4gxt_A 296 EGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLI 339 (385)
T ss_dssp HHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEE
T ss_pred CchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEE
Confidence 6799999877533 2 347788999999999986 56555543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.97 E-value=8e-06 Score=85.13 Aligned_cols=121 Identities=12% Similarity=0.023 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec-------cCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR-------ASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~-------~~p~~K~~ 583 (881)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.. .++ ...+.+. -.|+--..
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~------------~~i~~~~~~~~~~Kp~~~~~~~ 176 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE-LAG------------EHIYDPSWVGGRGKPHPDLYTF 176 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-HHC------------SCEECGGGGTTCCTTSSHHHHH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-hcc------------ceEEeHhhcCcCCCCChHHHHH
Confidence 457899999999999999999999999999999999998753 111 1011111 11222233
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCC-------cHHH-HhhcCeeeccCCchHHHHHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQG-------TAVA-KESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~-------~~~a-~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
+.+.+.-..+.++++||+.||+.|.+.||++ +.+. ++ .+.. +..+|+++. ++..+.+++..
T Consensus 177 ~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~~ 246 (259)
T 4eek_A 177 AAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SHAELRAALAE 246 (259)
T ss_dssp HHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CHHHHHHHHHh
Confidence 3333333346799999999999999999998 4453 33 2233 345999986 47788877765
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.97 E-value=6.9e-06 Score=83.69 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=84.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-------ccCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-------RASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-------~~~p~~K~~ 583 (881)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ++ .+++ .-.|+-...
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~-f~--------------~i~~~~~~~~~Kp~~~~~~~ 147 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY-FD--------------LIVGGDTFGEKKPSPTPVLK 147 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-CS--------------EEECTTSSCTTCCTTHHHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH-he--------------EEEecCcCCCCCCChHHHHH
Confidence 4689999999999999999999999999999999999997541 11 0121 122333344
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCC-CCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGI-QGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
+.+.+.-....++++||+.||++|.+.||++ |++.. .+.... ..+|+++.+ +..+.+.+.
T Consensus 148 ~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~--~~el~~~l~ 209 (222)
T 2nyv_A 148 TLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSR--PSDLVKLMD 209 (222)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESS--TTHHHHHHH
T ss_pred HHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECC--HHHHHHHHH
Confidence 5555544456789999999999999999988 66541 222222 568888864 666766554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.95 E-value=1.1e-05 Score=83.13 Aligned_cols=120 Identities=17% Similarity=0.216 Sum_probs=79.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.+++.+.++.|++.|+++.++|+.....+....+. |+.. .+.. +..+.+ ...|+--..+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~-----------d~i~~~~~~~~~kp~~~~~~~~ 175 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPG-MFHK-----------ELMVTAFDVKYGKPNPEPYLMA 175 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTT-TCCG-----------GGEECTTTCSSCTTSSHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHH-hcCc-----------ceEEeHHhCCCCCCChHHHHHH
Confidence 5679999999999999999999999988877777766 7754 1100 000111 1122222333
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcHH----HHhhcCeeeccCCchHHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTAV----AKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~----a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.+.+.-..+.++++||+.||+.|.+.||++ +.+. ++... .+..||+++.+ +..+.+++.
T Consensus 176 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~s--~~el~~~l~ 239 (243)
T 3qxg_A 176 LKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFPS--MQTLCDSWD 239 (243)
T ss_dssp HHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEESC--HHHHHHHHH
T ss_pred HHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 333333346789999999999999999995 4454 44332 23369999864 667766553
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=1.7e-05 Score=81.57 Aligned_cols=118 Identities=11% Similarity=0.067 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+... ++. .+.+ .-.|+--..+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~~-------------~~~~~~~~~~Kp~~~~~~~~ 170 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRV-LDS-------------CLSADDLKIYKPDPRIYQFA 170 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-CSE-------------EEEGGGTTCCTTSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHH-cCE-------------EEEccccCCCCCCHHHHHHH
Confidence 5779999999999999999999999999999999999998641 110 0111 1123333344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccEe---eCCCCcHHHHhhc-CeeeccCCchHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLS---MGIQGTAVAKESS-DIIILDDNFATAVTLL 645 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa---m~~~~~~~a~~~a-d~vl~~~~~~~i~~~i 645 (881)
.+.+.-..+.++++||+.||+.|.+.||+..+ .+ +..+..+..+ |+++.+ +..+.+.+
T Consensus 171 ~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~~--~~el~~~l 232 (240)
T 2no4_A 171 CDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVNS--LSELWPLL 232 (240)
T ss_dssp HHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEESS--GGGHHHHH
T ss_pred HHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeCC--HHHHHHHH
Confidence 44444345578899999999999999996543 34 2233334557 988864 66666544
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.87 E-value=1.3e-05 Score=81.74 Aligned_cols=125 Identities=9% Similarity=0.077 Sum_probs=83.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+... ++..-.. ...-...-.|+--..+.+.+.-
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-f~~~~~~-------~~~~~~Kp~~~~~~~~~~~~~~ 166 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG-FDHLLSV-------DPVQVYKPDNRVYELAEQALGL 166 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-CSEEEES-------GGGTCCTTSHHHHHHHHHHHTS
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhh-hheEEEe-------cccCCCCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999999999999999998541 1100000 0000112223333344444444
Q ss_pred cCCEEEEEcCCccCHHHHHhCCccEeeCC---CCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 591 KGHVVAVTGNGIKDAPALEEANVGLSMGI---QGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~vgIam~~---~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
..+.++++||+.||+.|.+.||+++++-. +..+..+..+|+++.+ +..+...+
T Consensus 167 ~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 222 (232)
T 1zrn_A 167 DRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVELF 222 (232)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTTC
T ss_pred CcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 45578899999999999999999988832 2223345568988853 66665444
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.87 E-value=8.1e-05 Score=76.47 Aligned_cols=120 Identities=14% Similarity=0.146 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~~ 584 (881)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+... ++. .+.+. -.|+--..+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-f~~-------------~~~~~~~~~~Kp~~~~~~~~ 159 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDF-FEH-------------VIISDFEGVKKPHPKIFKKA 159 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGG-CSE-------------EEEGGGGTCCTTCHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhh-ccE-------------EEEeCCCCCCCCCHHHHHHH
Confidence 4678999999999999999999999999989999999998641 110 01111 122222333
Q ss_pred HHHHhhcCCEEEEEcCCc-cCHHHHHhCCccEeeCC--CCcHHHHh---hcCeeeccCCchHHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGI-KDAPALEEANVGLSMGI--QGTAVAKE---SSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~--~~~~~a~~---~ad~vl~~~~~~~i~~~i~ 646 (881)
.+.+.-..+.++++||+. ||+.|.+.||++++.-. .+...... .+|+++.+ +..+...+.
T Consensus 160 ~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~l~ 225 (241)
T 2hoq_A 160 LKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDN--LESLLEVLA 225 (241)
T ss_dssp HHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESS--TTHHHHHHH
T ss_pred HHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECC--HHHHHHHHH
Confidence 344433345789999998 99999999999755421 33333332 68998864 666665553
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.5e-05 Score=81.02 Aligned_cols=115 Identities=10% Similarity=0.059 Sum_probs=79.7
Q ss_pred CCCccHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAG-VNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.+++.+.++.|+++| +++.++|+..........+.+|+... ++ .+++...| |...++.+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~-f~--------------~~~~~~kp--k~~~~~~~~ 167 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPY-FD--------------HIEVMSDK--TEKEYLRLL 167 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGG-CS--------------EEEEESCC--SHHHHHHHH
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhh-hh--------------eeeecCCC--CHHHHHHHH
Confidence 46789999999999999 99999999999888888999888541 11 12332223 444444443
Q ss_pred h----cCCEEEEEcCCc-cCHHHHHhCCccEeeCC------CCcHHHHhhc-CeeeccCCchHHHHH
Q 043535 590 L----KGHVVAVTGNGI-KDAPALEEANVGLSMGI------QGTAVAKESS-DIIILDDNFATAVTL 644 (881)
Q Consensus 590 ~----~g~~v~~iGDg~-ND~~~l~~A~vgIam~~------~~~~~a~~~a-d~vl~~~~~~~i~~~ 644 (881)
+ ..+.++++||+. ||+.|.+.||+++++-. ++....+..+ |+++.+ +..+.++
T Consensus 168 ~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~--l~el~~~ 232 (234)
T 3ddh_A 168 SILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKR--LDDLLSL 232 (234)
T ss_dssp HHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSS--GGGHHHH
T ss_pred HHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceeccc--HHHHHHh
Confidence 3 346799999996 99999999999988731 3333323344 888764 5555543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.85 E-value=2.8e-05 Score=79.38 Aligned_cols=114 Identities=10% Similarity=0.070 Sum_probs=80.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH--HHHHHHHH--
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP--DDKLAMVK-- 586 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~v~-- 586 (881)
++.|++.+.++.++ .|+++.++|+.....+....+.+|+... ++. .+.+...+ .-|.++++
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~-f~~-------------~~~~~~~~~~kp~~~~~~~~ 171 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRY-FKK-------------IILSEDLGVLKPRPEIFHFA 171 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGG-CSE-------------EEEGGGTTCCTTSHHHHHHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhh-cee-------------EEEeccCCCCCCCHHHHHHH
Confidence 56789999999999 9999999999999999999999888641 110 01111111 12233333
Q ss_pred --HHhhcCCEEEEEcCCc-cCHHHHHhCCccEeeCCCCcH--HHHhhcCeeeccCCchHHH
Q 043535 587 --CLKLKGHVVAVTGNGI-KDAPALEEANVGLSMGIQGTA--VAKESSDIIILDDNFATAV 642 (881)
Q Consensus 587 --~l~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~~~~~--~a~~~ad~vl~~~~~~~i~ 642 (881)
.+.-..+.++++||+. ||+.|.+.||++++|. +... ..+..+|+++.+ +..+.
T Consensus 172 ~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~d~vi~s--l~e~~ 229 (240)
T 3qnm_A 172 LSATQSELRESLMIGDSWEADITGAHGVGMHQAFY-NVTERTVFPFQPTYHIHS--LKELM 229 (240)
T ss_dssp HHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE-CCSCCCCCSSCCSEEESS--THHHH
T ss_pred HHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEE-cCCCCCCcCCCCceEECC--HHHHH
Confidence 3332346799999995 9999999999999998 4443 556679999975 55555
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=1.3e-05 Score=83.17 Aligned_cols=38 Identities=13% Similarity=0.151 Sum_probs=32.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCC
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGI 550 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi 550 (881)
.++.+.+.++|++++++|++++++|||+... +.+.++.
T Consensus 20 ~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~ 57 (246)
T 3f9r_A 20 LCQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR 57 (246)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence 3678999999999999999999999999985 4555664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.82 E-value=1.2e-05 Score=82.89 Aligned_cols=131 Identities=12% Similarity=0.119 Sum_probs=85.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHH-HHHH-----Hhh--heeeeccCHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEE-KMEK-----VEK--IYVMARASPDDKL 582 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~-----~~~--~~v~~~~~p~~K~ 582 (881)
++.|++.+.++.|+++|+++.++|+.....+..+.+ |+...+.- ...+. .... ..+ -..+.+.....|.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~v-~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~ 153 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDRI-YCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKP 153 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGGE-EEEEEECSSSBCEEECTTCCCTTCCSCCSSCHH
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCeE-EeeeeEEcCCceEEecCCCCccccccccCCcHH
Confidence 578999999999999999999999999988888887 76431000 00000 0000 000 0000000133577
Q ss_pred HHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhh--cCeeeccCCchHHHHHHHH
Q 043535 583 AMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKES--SDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 583 ~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~--ad~vl~~~~~~~i~~~i~~ 647 (881)
.+++.+....+.++++||+.||+.|.+.||+.++.. ...+..... +|+++. ++..+.+.+..
T Consensus 154 ~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 154 SVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp HHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred HHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 888888777889999999999999999999988743 222333333 677764 57777766654
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.82 E-value=3.9e-06 Score=84.34 Aligned_cols=109 Identities=13% Similarity=0.211 Sum_probs=77.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHH------HHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK------LAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K------~~~ 584 (881)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... ++ ..+.+......| ..+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~-f~-------------~~~~~~~~~~~KP~~~~~~~~ 147 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR-MA-------------VTISADDTPKRKPDPLPLLTA 147 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG-EE-------------EEECGGGSSCCTTSSHHHHHH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh-cc-------------EEEecCcCCCCCCCcHHHHHH
Confidence 4688999999999999 99999999999999999888887541 10 001111111223 333
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCC--C-CcHHHHhhcCeeecc
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGI--Q-GTAVAKESSDIIILD 635 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~--~-~~~~a~~~ad~vl~~ 635 (881)
.+.+.-..+.++++||+.||+.|.+.||+++++.. . ..+..+. ||+++.+
T Consensus 148 ~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~ 200 (209)
T 2hdo_A 148 LEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK 200 (209)
T ss_dssp HHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS
T ss_pred HHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC
Confidence 44443334679999999999999999999998741 2 3344555 9999864
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.81 E-value=3.5e-05 Score=78.17 Aligned_cols=120 Identities=11% Similarity=0.138 Sum_probs=78.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhh-hcC-CHHHHHHHHhhheeee--ccCHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEF-RNY-TEEEKMEKVEKIYVMA--RASPDDKLAMVK 586 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~-~~~~~~~~~~~~~v~~--~~~p~~K~~~v~ 586 (881)
++.+++.+.++.++. ++.++|+........+.+++|+.. .+ +.. ..+.. -.. ...|+--..+.+
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~--------~~~~~kpk~~~~~~~~~ 154 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKP-YFAPHIYSAKDL--------GADRVKPKPDIFLHGAA 154 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGG-GTTTCEEEHHHH--------CTTCCTTSSHHHHHHHH
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHH-hccceEEecccc--------ccCCCCcCHHHHHHHHH
Confidence 356788888888875 899999999999999999998864 11 110 00000 000 111222233334
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcH-------HHHhh-cCeeeccCCchHHHHHH
Q 043535 587 CLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTA-------VAKES-SDIIILDDNFATAVTLL 645 (881)
Q Consensus 587 ~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~-------~a~~~-ad~vl~~~~~~~i~~~i 645 (881)
.+.-..+.++++||+.||++|++.||++ ++++ ++.. ..++. ||+++.+ +..+.+.+
T Consensus 155 ~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l 219 (229)
T 2fdr_A 155 QFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI 219 (229)
T ss_dssp HHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred HcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeecC--HHHHHHHH
Confidence 4433346789999999999999999998 7776 5443 36666 9999864 55566544
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.78 E-value=2.8e-05 Score=76.95 Aligned_cols=87 Identities=10% Similarity=0.084 Sum_probs=66.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec--cCHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN-IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR--ASPDDKLAMVKC 587 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~--~~p~~K~~~v~~ 587 (881)
++.|++.+++++|+++|++++++||+. ...+..+.+.+|+.. .|.. ..+..|.+..+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-------------------~f~~~~~~~~~k~~~~~~ 128 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR-------------------YFVHREIYPGSKITHFER 128 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT-------------------TEEEEEESSSCHHHHHHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh-------------------hcceeEEEeCchHHHHHH
Confidence 578999999999999999999999999 799999999999975 2211 112233333332
Q ss_pred -Hhh---cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 588 -LKL---KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 588 -l~~---~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
+++ ..+.+++|||+.+|+.+.+.||+...
T Consensus 129 ~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 129 LQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 233 24568999999999999999998644
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.77 E-value=4e-05 Score=76.37 Aligned_cols=114 Identities=12% Similarity=0.158 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-------ccCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-------RASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-------~~~p~~K~~ 583 (881)
++.|++.+ ++.|+++ +++.++|+.+...+..+.+.+|+... ++. +++ .-.|+--..
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~-f~~--------------~~~~~~~~~~Kp~~~~~~~ 136 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRY-FKG--------------IFSAESVKEYKPSPKVYKY 136 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGG-CSE--------------EEEGGGGTCCTTCHHHHHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHh-CcE--------------EEehhhcCCCCCCHHHHHH
Confidence 46789999 9999999 99999999999999999999998641 110 111 122333344
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCC---CCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGI---QGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~---~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
+.+.+. .+.++++||+.||+.|.+.||++.++-. +..+..+..+|+++.+ +..+.+.+
T Consensus 137 ~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 197 (201)
T 2w43_A 137 FLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVND--FKELYEWI 197 (201)
T ss_dssp HHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESS--HHHHHHHH
T ss_pred HHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 455555 5678899999999999999999977621 2233334568988764 66666554
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.74 E-value=5.4e-05 Score=74.43 Aligned_cols=103 Identities=16% Similarity=0.094 Sum_probs=70.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC--HHHHHHHHHHHh
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS--PDDKLAMVKCLK 589 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~~v~~l~ 589 (881)
+.|++.+.++.|++.|++++++|+... .+....+.+|+... ++. .+.+... +..|.+.++.+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~-f~~-------------~~~~~~~~~~kp~~~~~~~~~ 147 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY-FTE-------------VVTSSSGFKRKPNPESMLYLR 147 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG-EEE-------------EECGGGCCCCTTSCHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh-eee-------------eeeccccCCCCCCHHHHHHHH
Confidence 678999999999999999999999864 56777788887541 110 0111100 111223333332
Q ss_pred -hcCC-EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcC
Q 043535 590 -LKGH-VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSD 630 (881)
Q Consensus 590 -~~g~-~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 630 (881)
+.|- .++++||+.||++|.+.||+++++. +.....++..+
T Consensus 148 ~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 148 EKYQISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp HHTTCSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHcCCCeEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 2221 7889999999999999999998887 66666666554
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.74 E-value=2.7e-05 Score=78.44 Aligned_cols=114 Identities=15% Similarity=0.109 Sum_probs=80.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
++.|++.+.++.|++ |+++.++|+.+...+....+.+|+... ++ ..+.+...+.-|.++.+...+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~-f~-------------~i~~~~~~~Kp~p~~~~~~~~ 148 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHF-FD-------------GIYGSSPEAPHKADVIHQALQ 148 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGG-CS-------------EEEEECSSCCSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhh-ee-------------eeecCCCCCCCChHHHHHHHH
Confidence 467999999999999 999999999998888888999998641 11 112222112234445444433
Q ss_pred c----CCEEEEEcCCccCHHHHHhCCc---cEeeCCCC-cHHHH-hhcCeeeccCCchHHH
Q 043535 591 K----GHVVAVTGNGIKDAPALEEANV---GLSMGIQG-TAVAK-ESSDIIILDDNFATAV 642 (881)
Q Consensus 591 ~----g~~v~~iGDg~ND~~~l~~A~v---gIam~~~~-~~~a~-~~ad~vl~~~~~~~i~ 642 (881)
+ .+.++++||+.||+.|.+.||+ +++++ ++ .+..+ ..+|+++.+ +..+.
T Consensus 149 ~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~~--~~el~ 206 (210)
T 2ah5_A 149 THQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAHK--PLEVL 206 (210)
T ss_dssp HTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEESS--TTHHH
T ss_pred HcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEECC--HHHHH
Confidence 2 3568999999999999999999 67776 44 34444 358999875 44444
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.73 E-value=7.6e-06 Score=84.79 Aligned_cols=110 Identities=10% Similarity=0.064 Sum_probs=73.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCCchhhhcCCHHHHHHHHhhheeeec--cCH--HHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ-CGILKPEFRNYTEEEKMEKVEKIYVMAR--ASP--DDKLAMV 585 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~v~~~--~~p--~~K~~~v 585 (881)
.+.+++.+.++.|++.|+++.++|+.....+.....+ .|+.. .+. ..+.+. ..+ .-|.+++
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~-------------~f~-~~~~~~~~~~~~~Kp~~~~~ 177 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFS-------------LFS-HIVLGDDPEVQHGKPDPDIF 177 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHT-------------TSS-CEECTTCTTCCSCTTSTHHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHh-------------hee-eEEecchhhccCCCCChHHH
Confidence 5788999999999999999999999987665543221 22211 000 011111 111 1122333
Q ss_pred HHHh-hcC-----CEEEEEcCCccCHHHHHhCC---ccEeeCCCCcHHHHhhcCeeecc
Q 043535 586 KCLK-LKG-----HVVAVTGNGIKDAPALEEAN---VGLSMGIQGTAVAKESSDIIILD 635 (881)
Q Consensus 586 ~~l~-~~g-----~~v~~iGDg~ND~~~l~~A~---vgIam~~~~~~~a~~~ad~vl~~ 635 (881)
+.+. +.| +.+++|||+.||+.|.+.|| ++++++ ++.+..+..||+++.+
T Consensus 178 ~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~s 235 (250)
T 3l5k_A 178 LACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNS 235 (250)
T ss_dssp HHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSC
T ss_pred HHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecC
Confidence 3333 323 78999999999999999999 566667 6666788899999875
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.73 E-value=4.9e-05 Score=78.91 Aligned_cols=117 Identities=10% Similarity=0.152 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+... ++. .+.+ .-.|+--..+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~-f~~-------------~~~~~~~~~~Kp~~~~~~~~ 156 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS-FDA-------------VISVDAKRVFKPHPDSYALV 156 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG-CSE-------------EEEGGGGTCCTTSHHHHHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhh-ccE-------------EEEccccCCCCCCHHHHHHH
Confidence 57899999999999 999999999999999999999998641 110 0111 1223333344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCC---------------------------cHHHHhhcCeeeccCC
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQG---------------------------TAVAKESSDIIILDDN 637 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~---------------------------~~~a~~~ad~vl~~~~ 637 (881)
.+.+.-..+.++++||+.||+.|.+.||++.++. +. .+..+..+|+++.+
T Consensus 157 ~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (253)
T 1qq5_A 157 EEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV-ARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA-- 233 (253)
T ss_dssp HHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEE-CCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS--
T ss_pred HHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEE-CCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCC--
Confidence 4444433467889999999999999999998887 44 12234568998864
Q ss_pred chHHHHHHH
Q 043535 638 FATAVTLLN 646 (881)
Q Consensus 638 ~~~i~~~i~ 646 (881)
+..+...+.
T Consensus 234 ~~el~~~l~ 242 (253)
T 1qq5_A 234 LGDLPRLVR 242 (253)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666553
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.72 E-value=5.4e-05 Score=79.37 Aligned_cols=44 Identities=11% Similarity=0.009 Sum_probs=38.1
Q ss_pred ccCCCCccHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCC
Q 043535 508 IKDPCRPGLKKAVEDCQYAGVNIKMITG---DNIFTAKAIATQCGIL 551 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~ 551 (881)
-.+.+-+++.++|++++++|++++++|| ++........+.+|+.
T Consensus 21 ~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 21 KSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp ETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 3555678999999999999999999999 7788888888888885
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.72 E-value=6.8e-05 Score=76.46 Aligned_cols=118 Identities=12% Similarity=0.110 Sum_probs=82.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH--HHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP--DDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~v~~l 588 (881)
.+.|++.+.++.|++. +++.++|+.....+....+.+|+... ++ ..+.+...+ ..|...++.+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~-f~-------------~~~~~~~~~~~kp~~~~~~~~ 167 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPF-FK-------------DIFVSEDTGFQKPMKEYFNYV 167 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGG-CS-------------EEEEGGGTTSCTTCHHHHHHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhh-hh-------------eEEEecccCCCCCChHHHHHH
Confidence 5678999999999999 99999999999999999999988641 11 001111111 1123333333
Q ss_pred -hhcC----CEEEEEcCCc-cCHHHHHhCCccE-eeCCCC--cHHHHhhcCeeeccCCchHHHHHHH
Q 043535 589 -KLKG----HVVAVTGNGI-KDAPALEEANVGL-SMGIQG--TAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 589 -~~~g----~~v~~iGDg~-ND~~~l~~A~vgI-am~~~~--~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
++.| +.++++||+. ||+.|.+.||++. .++ .+ .+..+..||+++.+ +..+.+++.
T Consensus 168 ~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~ad~v~~~--~~el~~~l~ 231 (238)
T 3ed5_A 168 FERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMN-PDMKPNVPEIIPTYEIRK--LEELYHILN 231 (238)
T ss_dssp HHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEEC-TTCCCCTTCCCCSEEESS--GGGHHHHHT
T ss_pred HHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEEC-CCCCCCcccCCCCeEECC--HHHHHHHHH
Confidence 2334 5799999998 9999999999954 343 33 45566789999874 667776664
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00012 Score=72.51 Aligned_cols=126 Identities=14% Similarity=0.112 Sum_probs=88.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCH---HHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-----------c
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNI---FTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-----------R 575 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-----------~ 575 (881)
-++.|++.+++++|+++|+++.++|+... ..+..+.+.+|+... ++ .+++ +
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~-fd--------------~i~~~~~~~~~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDY-FD--------------FIYASNSELQPGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGG-EE--------------EEEECCTTSSTTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhh-eE--------------EEEEccccccccCCCC
Confidence 35889999999999999999999998876 889999999998641 11 0221 1
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCccEeeCCCCcH-----HHH-hhcCeeeccCCchHHHHHHHHh
Q 043535 576 ASPDDKLAMVKCLKLKGHVVAVTGNG-IKDAPALEEANVGLSMGIQGTA-----VAK-ESSDIIILDDNFATAVTLLNWG 648 (881)
Q Consensus 576 ~~p~~K~~~v~~l~~~g~~v~~iGDg-~ND~~~l~~A~vgIam~~~~~~-----~a~-~~ad~vl~~~~~~~i~~~i~~g 648 (881)
-.|+--..+++.+.-....+++|||+ .+|+.+-+.||+....-.++.. ... ..+|+++...++..+.+++...
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 22333344455554445679999999 7999999999996443213321 111 2689999877788888887665
Q ss_pred HH
Q 043535 649 RC 650 (881)
Q Consensus 649 R~ 650 (881)
+.
T Consensus 178 ~~ 179 (189)
T 3ib6_A 178 KK 179 (189)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.69 E-value=4.3e-05 Score=79.00 Aligned_cols=121 Identities=13% Similarity=0.080 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.. +.. ..+.. -...-.|+--..+.+.+.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f---~~~~~~~~~--------~~~kp~~~~~~~~~~~lg 187 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW---DMLLCADLF--------GHYKPDPQVYLGACRLLD 187 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC---SEECCHHHH--------TCCTTSHHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc---ceEEeeccc--------ccCCCCHHHHHHHHHHcC
Confidence 4578999999999986 9999999999999999999988752 110 00000 011122222333344443
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEeeCCC----C---cHHH--HhhcCeeeccCCchHHHHHH
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLSMGIQ----G---TAVA--KESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~----~---~~~a--~~~ad~vl~~~~~~~i~~~i 645 (881)
-..+.+++|||+.||+.|.+.||++++|... + .+.. +..||+++.+ +..+.+++
T Consensus 188 i~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~--l~el~~~l 250 (254)
T 3umc_A 188 LPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASD--LLDLHRQL 250 (254)
T ss_dssp CCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESS--HHHHHHHH
T ss_pred CChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECC--HHHHHHHh
Confidence 3356799999999999999999999999831 1 2222 6679999874 77776655
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.67 E-value=4.7e-05 Score=80.31 Aligned_cols=108 Identities=19% Similarity=0.094 Sum_probs=76.4
Q ss_pred CCccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHHH
Q 043535 512 CRPGLKKAVEDCQYA-GVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLAM 584 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~~ 584 (881)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. ++. .+.+. ..|+--..+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f~~-------------i~~~~~~~~~kp~~~~~~~~ 179 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--PEY-------------FITANDVKQGKPHPEPYLKG 179 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--CSS-------------EECGGGCSSCTTSSHHHHHH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--cCE-------------EEEcccCCCCCCChHHHHHH
Confidence 578999999999999 99999999999999998888888752 110 01111 122223334
Q ss_pred HHHHhh-------cCCEEEEEcCCccCHHHHHhCCccEee---CCCCcHHHHh-hcCeeecc
Q 043535 585 VKCLKL-------KGHVVAVTGNGIKDAPALEEANVGLSM---GIQGTAVAKE-SSDIIILD 635 (881)
Q Consensus 585 v~~l~~-------~g~~v~~iGDg~ND~~~l~~A~vgIam---~~~~~~~a~~-~ad~vl~~ 635 (881)
.+.+.- ..+.++++||+.||+.|++.||+++++ + ++.+..++ .||+++.+
T Consensus 180 ~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~-~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 180 RNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATT-FDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSS-SCHHHHTTSSCSEEESS
T ss_pred HHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCC-CCHHHHhhCCCCEEECC
Confidence 444444 445699999999999999999977665 4 33344444 59999865
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.66 E-value=7.3e-05 Score=76.93 Aligned_cols=116 Identities=12% Similarity=0.170 Sum_probs=78.2
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc------CHHHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA------SPDDKLAMV 585 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~------~p~~K~~~v 585 (881)
+.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. . ++. .+.+.. .|+-=..+.
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f~~-------------~~~~~~~~~~Kp~p~~~~~~~ 175 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-FDF-------------ALGEKSGIRRKPAPDMTSECV 175 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-CSE-------------EEEECTTSCCTTSSHHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-eeE-------------EEecCCCCCCCCCHHHHHHHH
Confidence 5689999999999999999999999988888888888864 1 110 011111 122112333
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCcc---EeeCCCCc-HHHH-hhcCeeeccCCchHHHHHH
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANVG---LSMGIQGT-AVAK-ESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~vg---Iam~~~~~-~~a~-~~ad~vl~~~~~~~i~~~i 645 (881)
+.+.-..+.++++||+.||+.|.+.||+. ++++ ++. +..+ ..+|+++.+ +..+...+
T Consensus 176 ~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~~--~~el~~~l 237 (240)
T 2hi0_A 176 KVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVDT--AEKLEEAI 237 (240)
T ss_dssp HHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEECS--HHHHHHHH
T ss_pred HHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEECC--HHHHHHHh
Confidence 33433356799999999999999999994 4444 323 3343 368988853 66665443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.65 E-value=5.9e-05 Score=79.04 Aligned_cols=43 Identities=12% Similarity=-0.048 Sum_probs=37.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCCc
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITG---DNIFTAKAIATQCGILK 552 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~~ 552 (881)
+.+-+++.++|++++++|++++++|| +.........+++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 55667899999999999999999988 78888888888999853
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.64 E-value=4.6e-05 Score=79.74 Aligned_cols=124 Identities=15% Similarity=0.191 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.++++.|++.|+++.++|+.... +..+.+.+|+... ++.. ..++. -...-.|+--..+.+.+.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~-f~~~~~~~~~--------~~~Kp~~~~~~~~~~~~g 175 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREH-FDFVLTSEAA--------GWPKPDPRIFQEALRLAH 175 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGG-CSCEEEHHHH--------SSCTTSHHHHHHHHHHHT
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHh-hhEEEeeccc--------CCCCCCHHHHHHHHHHcC
Confidence 36799999999999999999999997664 6788888998541 1110 00000 012223444445555555
Q ss_pred hcCCEEEEEcCCc-cCHHHHHhCCccEeeCCCCcHH-----HHhhcCeeeccCCchHHHHHHH
Q 043535 590 LKGHVVAVTGNGI-KDAPALEEANVGLSMGIQGTAV-----AKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 590 ~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~~~~~~-----a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
-..+.+++|||+. ||+.|.+.||+++++...+... ....+|+++.+ +..+.+++.
T Consensus 176 ~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~--l~el~~~l~ 236 (263)
T 3k1z_A 176 MEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPS--LAHLLPALD 236 (263)
T ss_dssp CCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESS--GGGHHHHHH
T ss_pred CCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCC--HHHHHHHHH
Confidence 4556799999997 9999999999999987333211 22368999864 666666554
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.62 E-value=7.7e-05 Score=76.82 Aligned_cols=123 Identities=14% Similarity=0.068 Sum_probs=83.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.. +.. ..+.. -...-.|+--..+.+.+.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f---~~~~~~~~~--------~~~kp~~~~~~~~~~~lg 183 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW---DVIIGSDIN--------RKYKPDPQAYLRTAQVLG 183 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC---SCCCCHHHH--------TCCTTSHHHHHHHHHHTT
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe---eEEEEcCcC--------CCCCCCHHHHHHHHHHcC
Confidence 5678999999999997 9999999999999999999998752 111 01100 001111221122222222
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEeeCCCCc-------HH--HHhhcCeeeccCCchHHHHHHHH
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGT-------AV--AKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~-------~~--a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
-..+.+++|||+.||+.|.+.||++++|..... +. .+..+|+++. ++..+..++..
T Consensus 184 i~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~~ 248 (254)
T 3umg_A 184 LHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLRA 248 (254)
T ss_dssp CCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHHH
T ss_pred CChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHhcC
Confidence 224579999999999999999999999983211 11 3567899986 47788777654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00016 Score=74.70 Aligned_cols=118 Identities=14% Similarity=0.174 Sum_probs=80.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc--CHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA--SPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~~v~~l 588 (881)
.+.+++.+.++.|+ .|+++.++|+.....+....+.+|+.. .++ .+++.. .|+--..+.+.+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~--------------~i~~~~kp~~~~~~~~~~~l 175 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSD-LFP--------------RIEVVSEKDPQTYARVLSEF 175 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGG-TCC--------------CEEEESCCSHHHHHHHHHHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHH-hCc--------------eeeeeCCCCHHHHHHHHHHh
Confidence 46799999999999 999999999999988888888888753 111 133322 233334444444
Q ss_pred hhcCCEEEEEcCCc-cCHHHHHhCCccEeeCCCCcH--------HHHhhcCe-eeccCCchHHHHHHH
Q 043535 589 KLKGHVVAVTGNGI-KDAPALEEANVGLSMGIQGTA--------VAKESSDI-IILDDNFATAVTLLN 646 (881)
Q Consensus 589 ~~~g~~v~~iGDg~-ND~~~l~~A~vgIam~~~~~~--------~a~~~ad~-vl~~~~~~~i~~~i~ 646 (881)
.-..+.++++||+. ||+.|.+.||+++++-..+.. .....+|+ ++. ++..+..++.
T Consensus 176 ~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 241 (251)
T 2pke_A 176 DLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAAVR 241 (251)
T ss_dssp TCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHHHH
T ss_pred CcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHHHH
Confidence 44456799999999 999999999999776423321 11235787 665 4666665553
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=74.93 Aligned_cols=122 Identities=11% Similarity=0.085 Sum_probs=81.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|++ |+++.++|+.....+....+.++-.. +.. ..++. -..+..|+-...+++.++
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~f---d~i~~~~~~--------~~~KP~~~~~~~~l~~~~ 166 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEF---DHIITAQDV--------GSYKPNPNNFTYMIDALA 166 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCC---SEEEEHHHH--------TSCTTSHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCcc---CEEEEcccc--------CCCCCCHHHHHHHHHHHH
Confidence 678999999999999 89999999999888877766644211 100 00000 112234444445543333
Q ss_pred hc---CCEEEEEcCCc-cCHHHHHhCCccEeeCCCC----------cHHHHhhcCeeeccCCchHHHHHHH
Q 043535 590 LK---GHVVAVTGNGI-KDAPALEEANVGLSMGIQG----------TAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 590 ~~---g~~v~~iGDg~-ND~~~l~~A~vgIam~~~~----------~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
+. .+.+++|||+. ||+.|.+.||++++|...+ .+..+..||+++.+ +..+.+++.
T Consensus 167 ~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~--~~el~~~l~ 235 (240)
T 3smv_A 167 KAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNS--MGEMAEAHK 235 (240)
T ss_dssp HTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESS--HHHHHHHHH
T ss_pred hcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCC--HHHHHHHHH
Confidence 33 46789999996 9999999999999995221 12344789999864 666766554
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=4.2e-05 Score=80.16 Aligned_cols=58 Identities=19% Similarity=0.197 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhhc--CCEEEEEcC----CccCHHHHHhCC-ccEeeCCCCcHHHHhhcCeeeccCCc
Q 043535 579 DDKLAMVKCLKLK--GHVVAVTGN----GIKDAPALEEAN-VGLSMGIQGTAVAKESSDIIILDDNF 638 (881)
Q Consensus 579 ~~K~~~v~~l~~~--g~~v~~iGD----g~ND~~~l~~A~-vgIam~~~~~~~a~~~ad~vl~~~~~ 638 (881)
..|+..++.+ .. .+.|+++|| |.||.+||+.|+ +|++|+ |+.+.+|+.||+++.+++.
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC--
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCcC
Confidence 3699999998 22 468999999 999999999999 599998 9999999999999987654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00025 Score=70.33 Aligned_cols=98 Identities=7% Similarity=0.031 Sum_probs=69.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|++.| ++.++|+.+...+..+.+.+|+... ++.. ..++. -.....|+--..+.+.+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~-f~~~~~~~~~--------~~~Kp~~~~~~~~~~~~~ 155 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEF-LLAFFTSSAL--------GVMKPNPAMYRLGLTLAQ 155 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGT-CSCEEEHHHH--------SCCTTCHHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHh-cceEEeeccc--------CCCCCCHHHHHHHHHHcC
Confidence 36799999999999999 9999999999999999899887531 1110 00000 012223333344445554
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
-..+.++++||+.||+.|.+.||+...+-
T Consensus 156 ~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 156 VRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp CCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred CCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 44567899999999999999999998876
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00066 Score=68.17 Aligned_cols=126 Identities=13% Similarity=0.139 Sum_probs=80.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+... ++..-. ....-..+-.|+-=..+.+.+.-
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~-fd~~~~-------~~~~~~~KP~p~~~~~a~~~lg~ 155 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKY-FDVMVF-------GDQVKNGKPDPEIYLLVLERLNV 155 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-CSEEEC-------GGGSSSCTTSTHHHHHHHHHHTC
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcc-cccccc-------ccccCCCcccHHHHHHHHHhhCC
Confidence 3578999999999999999999999999999999999998751 110000 00000112233333444555554
Q ss_pred cCCEEEEEcCCccCHHHHHhCCccE----eeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 591 KGHVVAVTGNGIKDAPALEEANVGL----SMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~vgI----am~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
..+.++||||+.+|+.+-+.||+.. .-+.+..+...++.+..+.+ ...+++.++
T Consensus 156 ~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l~ 213 (216)
T 3kbb_A 156 VPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVLK 213 (216)
T ss_dssp CGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHHH
T ss_pred CccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHHH
Confidence 4567999999999999999999852 22323444555543333332 344554443
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.38 E-value=7.6e-05 Score=74.77 Aligned_cols=102 Identities=8% Similarity=0.018 Sum_probs=69.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH------cCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ------CGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~------~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
++.|++.+.++.|++ |++++++|+.....+..+.+. .|+... ++.. ..++. -...-.|+--..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~-f~~~~~~~~~--------~~~Kp~~~~~~~ 158 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF-FDKVYASCQM--------GKYKPNEDIFLE 158 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG-SSEEEEHHHH--------TCCTTSHHHHHH
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH-cCeEEeeccc--------CCCCCCHHHHHH
Confidence 467899999999999 999999999998888877777 666431 1100 00000 011222333334
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTA 623 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~ 623 (881)
+.+.+.-..+.++++||+.||+.|.+.||++.++. +..+
T Consensus 159 ~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~-~~~~ 197 (211)
T 2i6x_A 159 MIADSGMKPEETLFIDDGPANVATAERLGFHTYCP-DNGE 197 (211)
T ss_dssp HHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTTC
T ss_pred HHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEE-CCHH
Confidence 44444444567999999999999999999999887 5443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.30 E-value=9.5e-05 Score=75.04 Aligned_cols=90 Identities=17% Similarity=0.187 Sum_probs=63.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNI---------------FTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA 574 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~ 574 (881)
.++.|++.+++++|+++|+++.++|+... ..+....+++|+.-.. .+.+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------------~~~~ 118 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM----------------VLAC 118 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE----------------EEEE
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceee----------------EEEe
Confidence 57889999999999999999999999988 6777888888864110 0111
Q ss_pred c------------------cCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 575 R------------------ASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 575 ~------------------~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
. -.|.-=..+.+.+.-..+.++||||+.||+.|.+.||+..
T Consensus 119 ~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 119 AYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp CCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 1 1111112233333323457899999999999999999864
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00011 Score=67.94 Aligned_cols=98 Identities=10% Similarity=0.007 Sum_probs=65.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+++++|+++|+++.++|+.+...+..+.+.+|+... ++.. ..++. -..+-.|+--..+.+.+.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~-f~~i~~~~~~--------~~~Kp~~~~~~~~~~~~~ 88 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGV-VDKVLLSGEL--------GVEKPEEAAFQAAADAID 88 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTS-SSEEEEHHHH--------SCCTTSHHHHHHHHHHTT
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhh-ccEEEEeccC--------CCCCCCHHHHHHHHHHcC
Confidence 4678899999999999999999999998888888888776531 1100 00000 011222333333334443
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEee
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLSM 617 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIam 617 (881)
-..+.++++||+.+|+.+.+.+|+....
T Consensus 89 ~~~~~~~~vgD~~~di~~a~~~G~~~i~ 116 (137)
T 2pr7_A 89 LPMRDCVLVDDSILNVRGAVEAGLVGVY 116 (137)
T ss_dssp CCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CCcccEEEEcCCHHHHHHHHHCCCEEEE
Confidence 3345689999999999999999985433
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00075 Score=70.47 Aligned_cols=44 Identities=11% Similarity=0.123 Sum_probs=38.0
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCCc
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMIT---GDNIFTAKAIATQCGILK 552 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~~ 552 (881)
.+..-+++.++|++++++|++++++| |+.........+++|+..
T Consensus 19 ~~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 19 GKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp TTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 34333899999999999999999999 889999999999999854
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00016 Score=74.85 Aligned_cols=52 Identities=13% Similarity=0.164 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhc--CCEEEEEcC----CccCHHHHHhCCc-cEeeCCCCcHHHHhhcCeee
Q 043535 580 DKLAMVKCLKLK--GHVVAVTGN----GIKDAPALEEANV-GLSMGIQGTAVAKESSDIII 633 (881)
Q Consensus 580 ~K~~~v~~l~~~--g~~v~~iGD----g~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl 633 (881)
.|+..++.+ .. .+.|+++|| |.||.+||+.|+. |++|+ |+.+.+|+.||+|.
T Consensus 188 ~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 188 DKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLFS 246 (246)
T ss_dssp SGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHCC
T ss_pred chHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhcC
Confidence 688888888 22 468999999 9999999999988 99999 99999999999873
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.001 Score=67.27 Aligned_cols=118 Identities=14% Similarity=0.145 Sum_probs=74.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|++. +++.++|+.... .+.+|+.. .++.. ..+.. -...-.|+--..+.+.+.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~-~f~~~~~~~~~--------~~~kp~~~~~~~~~~~~~ 169 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLAD-YFAFALCAEDL--------GIGKPDPAPFLEALRRAK 169 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGG-GCSEEEEHHHH--------TCCTTSHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHH-HeeeeEEcccc--------CCCCcCHHHHHHHHHHhC
Confidence 4678999999999998 999999987754 34556543 11100 00000 001122333334444444
Q ss_pred hcCCEEEEEcCCc-cCHHHHHhCCccEeeC---CCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 590 LKGHVVAVTGNGI-KDAPALEEANVGLSMG---IQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 590 ~~g~~v~~iGDg~-ND~~~l~~A~vgIam~---~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
-....++++||+. ||+.|.+.||++.++- .+..+. +..+|+++.+ +..+.+++.
T Consensus 170 ~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~--l~el~~~l~ 227 (230)
T 3vay_A 170 VDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHN--LSQLPEVLA 227 (230)
T ss_dssp CCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESS--GGGHHHHHH
T ss_pred CCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECC--HHHHHHHHH
Confidence 3456799999998 9999999999988772 122223 6678999874 667766553
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0016 Score=67.87 Aligned_cols=117 Identities=12% Similarity=0.147 Sum_probs=80.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.++++.|++ |+++.++|+.+...+..+.+.+|+... ++. .+.+ +-.|+--..+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~-f~~-------------i~~~~~~~~~KP~p~~~~~~ 185 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY-FDA-------------IVIGGEQKEEKPAPSIFYHC 185 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG-CSE-------------EEEGGGSSSCTTCHHHHHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhh-hhe-------------EEecCCCCCCCCCHHHHHHH
Confidence 578999999999998 599999999999999999999998641 110 0111 1223333344
Q ss_pred HHHHhhcCCEEEEEcCC-ccCHHHHHhCCc--cEeeCCCCcH---HHHhhcCeeeccCCchHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNG-IKDAPALEEANV--GLSMGIQGTA---VAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg-~ND~~~l~~A~v--gIam~~~~~~---~a~~~ad~vl~~~~~~~i~~~i 645 (881)
.+.+.-....+++|||+ .||+.+-+.||+ .|.+. .+.. .....+|+++.+ +..+..++
T Consensus 186 ~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~-~~~~~~~~~~~~~~~~i~~--~~el~~~l 249 (260)
T 2gfh_A 186 CDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN-KSGRVPLTSSPMPHYMVSS--VLELPALL 249 (260)
T ss_dssp HHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEEC-TTCCCCSSCCCCCSEEESS--GGGHHHHH
T ss_pred HHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEc-CCCCCcCcccCCCCEEECC--HHHHHHHH
Confidence 44444445678999995 999999999999 57776 3321 123458888764 56666544
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0002 Score=71.29 Aligned_cols=99 Identities=5% Similarity=0.075 Sum_probs=64.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCCchhhhcCCHHHHHHHHhhheee-------eccCHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ-CGILKPEFRNYTEEEKMEKVEKIYVM-------ARASPDDKL 582 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~v~-------~~~~p~~K~ 582 (881)
++.|++.+.++.|++.|++++++|+.....+..+.+. .|+.. .+.. ++ ..-.|+--.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~-------------~f~~--~~~~~~~~~~Kp~~~~~~ 155 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD-------------AADH--IYLSQDLGMRKPEARIYQ 155 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH-------------HCSE--EEEHHHHTCCTTCHHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhh-------------heee--EEEecccCCCCCCHHHHH
Confidence 4679999999999999999999999765543322222 22211 1100 11 122333344
Q ss_pred HHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHH
Q 043535 583 AMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVA 625 (881)
Q Consensus 583 ~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a 625 (881)
.+.+.+.-..+.++++||+.||+.|.+.||+...+. +..+..
T Consensus 156 ~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~-~~~~~~ 197 (206)
T 2b0c_A 156 HVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV-KDKTTI 197 (206)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC-CSTTHH
T ss_pred HHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe-cCCchH
Confidence 455555544567899999999999999999998877 444433
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00054 Score=69.62 Aligned_cols=105 Identities=9% Similarity=-0.010 Sum_probs=70.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH------cCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ------CGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~------~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
++.|++.+.++.|++. +++.++|+.....+..+.+. .|+.. .++.. ..++ .-..+-.|+--..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~-~fd~i~~~~~--------~~~~KP~~~~~~~ 181 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVED-YFEKTYLSYE--------MKMAKPEPEIFKA 181 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHH-HCSEEEEHHH--------HTCCTTCHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHH-hCCEEEeecc--------cCCCCCCHHHHHH
Confidence 3669999999999999 99999999999888876643 44422 01000 0000 0112223344445
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAK 626 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~ 626 (881)
+.+.+.-..+.+++|||+.||+.|.+.||++.++. +..+..+
T Consensus 182 ~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v-~~~~~~k 223 (229)
T 4dcc_A 182 VTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP-KAGEDWS 223 (229)
T ss_dssp HHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTTCCGG
T ss_pred HHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEE-CCHHHHH
Confidence 55555545567999999999999999999998887 5544333
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0054 Score=63.92 Aligned_cols=43 Identities=14% Similarity=0.043 Sum_probs=38.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCCc
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMIT---GDNIFTAKAIATQCGILK 552 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~~ 552 (881)
+++.+++.+++++++++|++++++| |+.........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 6677899999999999999999999 999999988889998853
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0022 Score=70.56 Aligned_cols=131 Identities=15% Similarity=0.171 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh---cCCHHHHHH---HHhhheeeeccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR---NYTEEEKME---KVEKIYVMARASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~---~~~~~~~~~---~~~~~~v~~~~~p~~K~~~ 584 (881)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.. .++ -...++... ......-..+-.|+-=...
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~-~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a 293 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP-YFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG-GSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH-hcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence 678999999999999999999999999999999999999864 222 112222110 0000000112222221222
Q ss_pred HHHHh--------------hcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCc------HHH-HhhcCeeeccCCchHHH
Q 043535 585 VKCLK--------------LKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGT------AVA-KESSDIIILDDNFATAV 642 (881)
Q Consensus 585 v~~l~--------------~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~------~~a-~~~ad~vl~~~~~~~i~ 642 (881)
.+.+. -....+++|||+.+|+.+-++||+. |++. .+. +.. ...||+++.+ +..+.
T Consensus 294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~s--l~eL~ 370 (384)
T 1qyi_A 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVINH--LGELR 370 (384)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEESS--GGGHH
T ss_pred HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEECC--HHHHH
Confidence 22221 1236789999999999999999986 4444 321 222 2368999864 66666
Q ss_pred HHH
Q 043535 643 TLL 645 (881)
Q Consensus 643 ~~i 645 (881)
..+
T Consensus 371 ~~l 373 (384)
T 1qyi_A 371 GVL 373 (384)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.011 Score=61.07 Aligned_cols=40 Identities=13% Similarity=0.102 Sum_probs=36.3
Q ss_pred CCccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMIT---GDNIFTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 551 (881)
+.+++.++++.+++.|+++.++| |+.........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99999998888888875
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0043 Score=61.58 Aligned_cols=88 Identities=13% Similarity=0.071 Sum_probs=59.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-c------cCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-R------ASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-~------~~p~~K~~ 583 (881)
++.|++.++++.|+++|+++.++||.....+..+.. ..+.. +++ . -.|+--..
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~d~-------------------v~~~~~~~~~KP~p~~~~~ 95 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVNDW-------------------MIAAPRPTAGWPQPDACWM 95 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTTTT-------------------CEECCCCSSCTTSTHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccCCE-------------------EEECCcCCCCCCChHHHHH
Confidence 567999999999999999999999999887755543 11111 222 1 12222222
Q ss_pred HHHHHhhc-CCEEEEEcCCccCHHHHHhCCc-cEeeC
Q 043535 584 MVKCLKLK-GHVVAVTGNGIKDAPALEEANV-GLSMG 618 (881)
Q Consensus 584 ~v~~l~~~-g~~v~~iGDg~ND~~~l~~A~v-gIam~ 618 (881)
..+.+.-. .+.++||||+.+|+.+-+.||+ +|++.
T Consensus 96 a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 96 ALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 33333322 2568999999999999999997 45554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00089 Score=69.04 Aligned_cols=85 Identities=12% Similarity=0.141 Sum_probs=65.8
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNI----FTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAM 584 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 584 (881)
+.++.|++.+.++.|+++|+++.++||++. +.+..-.+++|+.... +..++.+.....|...
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--------------~~~Lilr~~~~~K~~~ 164 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--------------DKTLLLKKDKSNKSVR 164 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--------------TTTEEEESSCSSSHHH
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc--------------cceeEecCCCCChHHH
Confidence 357889999999999999999999999965 4777778889997510 0014444445678888
Q ss_pred HHHHhhcC-CEEEEEcCCccCHHH
Q 043535 585 VKCLKLKG-HVVAVTGNGIKDAPA 607 (881)
Q Consensus 585 v~~l~~~g-~~v~~iGDg~ND~~~ 607 (881)
.+.+.+.| ..|+++||..+|.++
T Consensus 165 r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 165 FKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp HHHHHTTTCEEEEEEESSGGGGCG
T ss_pred HHHHHhcCCCEEEEECCChHHcCc
Confidence 88888854 468889999999887
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.00088 Score=69.18 Aligned_cols=85 Identities=13% Similarity=0.098 Sum_probs=65.2
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNI----FTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAM 584 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 584 (881)
++++.|++.+.++.|+++|+++.++||++. ..+..-.+++|+...+ ...++.|.....|...
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~--------------~~~Lilr~~~~~K~~~ 164 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE--------------ESAFYLKKDKSAKAAR 164 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS--------------GGGEEEESSCSCCHHH
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc--------------ccceeccCCCCChHHH
Confidence 457889999999999999999999999965 4777778889997410 0014555444568888
Q ss_pred HHHHhhcC-CEEEEEcCCccCHHH
Q 043535 585 VKCLKLKG-HVVAVTGNGIKDAPA 607 (881)
Q Consensus 585 v~~l~~~g-~~v~~iGDg~ND~~~ 607 (881)
.+.+.+.| ..|+++||..+|.++
T Consensus 165 r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 165 FAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp HHHHHHTTEEEEEEEESSGGGGCS
T ss_pred HHHHHhcCCCEEEEECCChHHhcc
Confidence 88888774 468889999999876
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0095 Score=60.55 Aligned_cols=39 Identities=13% Similarity=0.157 Sum_probs=32.7
Q ss_pred CccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCC
Q 043535 513 RPGLKKAVEDCQYAGVNIKMIT---GDNIFTAKAIATQCGIL 551 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 551 (881)
-+.+.++++.+++.|++++++| |+..........+.|+.
T Consensus 21 ~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 21 VPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp CTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 3445889999999999999999 88888888877778875
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0094 Score=58.30 Aligned_cols=52 Identities=15% Similarity=0.144 Sum_probs=34.7
Q ss_pred EEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCC
Q 043535 433 HWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDP 511 (881)
Q Consensus 433 ~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~ 511 (881)
+..|+++.|.+..- .+++ .+.+.+.++..+|..++.+| .|..++|++++.|+
T Consensus 134 v~iGn~~~m~~~gi----------~i~~----~~~~~~~~~~~~G~T~V~va-------------idg~l~g~iavaD~ 185 (185)
T 2kmv_A 134 VLIGNREWMIRNGL----------VINN----DVNDFMTEHERKGRTAVLVA-------------VDDELCGLIAIADT 185 (185)
T ss_dssp EEEECHHHHHHHTC----------CCCH----HHHHHHHHHHHTTCEEEEEE-------------ETTEEEEEEEEECC
T ss_pred EEECCHHHHHHcCC----------CCCH----HHHHHHHHHHhCCCeEEEEE-------------ECCEEEEEEEEEcC
Confidence 35599998865321 1122 23344566777888888887 35689999999985
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0093 Score=61.45 Aligned_cols=112 Identities=14% Similarity=0.212 Sum_probs=74.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
++.|++.+.++.|++.|+++.+.|+... +..+.+.+|+... ++..-. ....-..+-.|+-=..+.+.+.-
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~-Fd~i~~-------~~~~~~~KP~p~~~~~a~~~lg~ 185 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDK-FDFIAD-------AGKCKNNKPHPEIFLMSAKGLNV 185 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGG-CSEECC-------GGGCCSCTTSSHHHHHHHHHHTC
T ss_pred ccchhHHHHHHHHHhcccccccccccch--hhhHhhhcccccc-cceeec-------ccccCCCCCcHHHHHHHHHHhCC
Confidence 4679999999999999999998877643 5567788888651 110000 00000122234444455555555
Q ss_pred cCCEEEEEcCCccCHHHHHhCCc-cEeeCCCCcHHHHhhcCeeecc
Q 043535 591 KGHVVAVTGNGIKDAPALEEANV-GLSMGIQGTAVAKESSDIIILD 635 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl~~ 635 (881)
..+.+++|||+.+|+.+-+.||+ .|+++ +..+ ...||+++.+
T Consensus 186 ~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~~ 228 (250)
T 4gib_A 186 NPQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVDS 228 (250)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEESS
T ss_pred ChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEECC
Confidence 55679999999999999999998 56665 4332 2358999865
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0018 Score=63.04 Aligned_cols=92 Identities=18% Similarity=0.176 Sum_probs=62.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGD---------------NIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA- 574 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~- 574 (881)
++.|++.+++++|+++|+++.++|+. ....+..+.+.+|+.. +. .+++
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d~-------------v~~s~ 105 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF---DE-------------VLICP 105 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE---EE-------------EEEEC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe---eE-------------EEEcC
Confidence 57899999999999999999999998 4667778888888852 10 0112
Q ss_pred ----c----cCH--HHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeC
Q 043535 575 ----R----ASP--DDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMG 618 (881)
Q Consensus 575 ----~----~~p--~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 618 (881)
. ..| +-=..+.+.+.-..+.+++|||+.+|+.+-+.||+. |.+.
T Consensus 106 ~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 106 HLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp CCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred CCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 1 111 111122233333345689999999999999999996 4454
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.013 Score=59.44 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=72.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
++.|++.+.++.|+++| ++.++|+.....+....+.+|+.. .+. .. +... ..|...++.+.+
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~-~f~------------~~-~~~~---~~K~~~~~~~~~ 157 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWD-EVE------------GR-VLIY---IHKELMLDQVME 157 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHH-HTT------------TC-EEEE---SSGGGCHHHHHH
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHH-hcC------------ee-EEec---CChHHHHHHHHh
Confidence 57899999999999999 999999999988999999988753 111 10 1111 122233333332
Q ss_pred --cCCEEEEEcCCcc---CHHHHHhCCcc-EeeCCCC-----cHHHHhh--cCeeeccCCchHHHH
Q 043535 591 --KGHVVAVTGNGIK---DAPALEEANVG-LSMGIQG-----TAVAKES--SDIIILDDNFATAVT 643 (881)
Q Consensus 591 --~g~~v~~iGDg~N---D~~~l~~A~vg-Iam~~~~-----~~~a~~~--ad~vl~~~~~~~i~~ 643 (881)
..+.+++|||+.| |+.+-+.||+. |.+. .+ .+..++. +|+++.+ +..+.+
T Consensus 158 ~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~~--~~el~~ 220 (231)
T 2p11_A 158 CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVER--IGDLVE 220 (231)
T ss_dssp HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEESS--GGGGGG
T ss_pred cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeecC--HHHHHH
Confidence 3568999999999 66666777764 3343 22 2234443 8998864 444443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.68 E-value=0.014 Score=61.99 Aligned_cols=97 Identities=12% Similarity=-0.023 Sum_probs=65.9
Q ss_pred ccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHH---HHHHHH--------cCCCchhhhcCCHHHHHHHHhhheeeecc
Q 043535 508 IKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTA---KAIATQ--------CGILKPEFRNYTEEEKMEKVEKIYVMARA 576 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a---~~ia~~--------~gi~~~~~~~~~~~~~~~~~~~~~v~~~~ 576 (881)
.++++.|++.++++.|+++|+++.++||+....+ ....+. .|+....+- ..++ .-.+-
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~----------~~~kp 253 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQC-QREQ----------GDTRK 253 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEE-ECCT----------TCCSC
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchhee-eccC----------CCCcH
Confidence 4577899999999999999999999999985432 334444 677321000 0000 00123
Q ss_pred CHHHHHHHHHHHhhcCC-EEEEEcCCccCHHHHHhCCccE
Q 043535 577 SPDDKLAMVKCLKLKGH-VVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 577 ~p~~K~~~v~~l~~~g~-~v~~iGDg~ND~~~l~~A~vgI 615 (881)
.|+-|..+.+.+..... .++|+||..+|+.|-+.||+-.
T Consensus 254 ~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 254 DDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 35667777777754443 4688999999999999999863
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.014 Score=62.59 Aligned_cols=110 Identities=14% Similarity=0.083 Sum_probs=71.7
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCCchhhhcCC--------------HHHHHHH----
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ----CGILKPEFRNYT--------------EEEKMEK---- 566 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~--------------~~~~~~~---- 566 (881)
...+.|+..+.++.|+++|++|+++||-....+..+|.. .||+.+.+-... ..+..+-
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccc
Confidence 346789999999999999999999999999999999998 477654211100 0000000
Q ss_pred --Hhhheee-----eccCHHHHHHHHHHHhhcC-CEEEEEcCC-ccCHHHHHh--CCccEeeC
Q 043535 567 --VEKIYVM-----ARASPDDKLAMVKCLKLKG-HVVAVTGNG-IKDAPALEE--ANVGLSMG 618 (881)
Q Consensus 567 --~~~~~v~-----~~~~p~~K~~~v~~l~~~g-~~v~~iGDg-~ND~~~l~~--A~vgIam~ 618 (881)
..+...- -...-+.|...++.....| ..+++.||+ ..|.+||+. ++.|+++-
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~ 283 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLW 283 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEE
T ss_pred cccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEE
Confidence 0000000 0112357888887776444 468889999 579999965 45555543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.31 E-value=0.0078 Score=62.48 Aligned_cols=83 Identities=13% Similarity=0.152 Sum_probs=53.5
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCC--chhhhcCCHHHHHHHHhhheeeeccCHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDN---IFTAKAIATQCGIL--KPEFRNYTEEEKMEKVEKIYVMARASPDDKLAM 584 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 584 (881)
.++.|++.++|+.|+++|+++.++||+. ...+....+.+|+. .. .. .+.+...+ .|...
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~-~~--------------vi~~~~~~-~K~~~ 163 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATK-EH--------------ILLQDPKE-KGKEK 163 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCST-TT--------------EEEECTTC-CSSHH
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCC-ce--------------EEECCCCC-CCcHH
Confidence 4578999999999999999999999998 45555666778887 21 00 01221110 11111
Q ss_pred HHHHhhcC-CEEEEEcCCccCHHHH
Q 043535 585 VKCLKLKG-HVVAVTGNGIKDAPAL 608 (881)
Q Consensus 585 v~~l~~~g-~~v~~iGDg~ND~~~l 608 (881)
...+.+.+ ..++++||+.+|+.+-
T Consensus 164 ~~~~~~~~~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 164 RRELVSQTHDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp HHHHHHHHEEEEEEEESSGGGSTTC
T ss_pred HHHHHHhCCCceEEeCCCHHHhccc
Confidence 22222222 3578999999998875
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.29 E-value=0.0096 Score=59.84 Aligned_cols=92 Identities=12% Similarity=0.073 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHH--H-HHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKL--A-MVKC 587 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~--~-~v~~ 587 (881)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+... ++. .+.+......|- + +...
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~-f~~-------------~~~~~~~~~~Kp~~~~~~~~ 159 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKY-FDA-------------LALSYEIKAVKPNPKIFGFA 159 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGG-CSE-------------EC-----------CCHHHHH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhH-eeE-------------EEeccccCCCCCCHHHHHHH
Confidence 4679999999999999999999999866 47788888898641 111 011111111121 1 2222
Q ss_pred HhhcCCEEEEEcCCcc-CHHHHHhCCccEee
Q 043535 588 LKLKGHVVAVTGNGIK-DAPALEEANVGLSM 617 (881)
Q Consensus 588 l~~~g~~v~~iGDg~N-D~~~l~~A~vgIam 617 (881)
+++.|-.-++|||+.+ |+.+-+.||+....
T Consensus 160 ~~~~~~~~~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 160 LAKVGYPAVHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHCSSEEEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHcCCCeEEEcCCchHhHHHHHHCCCeEEE
Confidence 3333321189999999 99999999997553
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.23 E-value=0.085 Score=54.03 Aligned_cols=49 Identities=18% Similarity=0.244 Sum_probs=35.5
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCCc
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMIT---GDNIFTAKAIATQCGILK 552 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~~ 552 (881)
|++.=.++.-+++.++++.++++|++++++| |+.........+++|+..
T Consensus 16 GTLld~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 16 GTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp SSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CcEEeCCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 3333355566789999999999999999999 667777766667777753
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=95.15 E-value=0.026 Score=60.02 Aligned_cols=43 Identities=14% Similarity=0.094 Sum_probs=37.0
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCC
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMIT---GDNIFTAKAIATQCGIL 551 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~ 551 (881)
.+++-+++.+++++++++|++++++| |+.........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 68888877777888876
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.92 E-value=0.054 Score=56.16 Aligned_cols=116 Identities=13% Similarity=0.138 Sum_probs=74.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc---CCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQC---GILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVK 586 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 586 (881)
-++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+.. .++.. +.. .+..+-.|+-=..+.+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~-~fd~i--------~~~-~~~~KP~p~~~~~~~~ 198 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILE-LVDGH--------FDT-KIGHKVESESYRKIAD 198 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGG-GCSEE--------ECG-GGCCTTCHHHHHHHHH
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHh-hccEE--------Eec-CCCCCCCHHHHHHHHH
Confidence 368899999999999999999999999998888777644 3543 11100 000 0112222333334445
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCC--c-HHHHhhcCeeecc
Q 043535 587 CLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQG--T-AVAKESSDIIILD 635 (881)
Q Consensus 587 ~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~--~-~~a~~~ad~vl~~ 635 (881)
.+.-..+.++||||..+|+.+-+.||+- |.+...+ . +.....+|+++.+
T Consensus 199 ~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~ 251 (261)
T 1yns_A 199 SIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 251 (261)
T ss_dssp HHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred HhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECC
Confidence 5544456799999999999999999985 4443111 1 1223457777654
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.93 E-value=0.068 Score=54.55 Aligned_cols=109 Identities=12% Similarity=0.201 Sum_probs=70.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|+++|+++.++|+... +..+.+.+|+... ++.. ..++ .-..+-.|+-=....+.+.
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~-fd~i~~~~~--------~~~~KP~p~~~~~a~~~lg 163 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF-FTFCADASQ--------LKNSKPDPEIFLAACAGLG 163 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG-CSEECCGGG--------CSSCTTSTHHHHHHHHHHT
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc-ccccccccc--------ccCCCCcHHHHHHHHHHcC
Confidence 4679999999999999999999998754 4556788888651 1100 0000 0011222333334455555
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcHHHHhhcCeeecc
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTAVAKESSDIIILD 635 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a~~~ad~vl~~ 635 (881)
-..+.+++|||+.+|+.+-++||+- |++. .+. ..+|.++.+
T Consensus 164 ~~p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~~ 205 (243)
T 4g9b_A 164 VPPQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLPS 205 (243)
T ss_dssp SCGGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEESS
T ss_pred CChHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcCC
Confidence 5566799999999999999999984 5565 332 235666543
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=93.70 E-value=0.0096 Score=59.78 Aligned_cols=92 Identities=13% Similarity=0.139 Sum_probs=55.4
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ----CGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKC 587 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 587 (881)
+.+++.+.++.|+++|+++.++|+.....+..+.+. .+...... ....+....|.- ..+.+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~~~-------------~~~~~~~~KP~p-~~~~~~ 154 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM-------------NPVIFAGDKPGQ-NTKSQW 154 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB-------------CCCEECCCCTTC-CCSHHH
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCcccccc-------------chhhhcCCCCCH-HHHHHH
Confidence 467899999999999999999999975433322222 22210000 000111122211 122333
Q ss_pred HhhcCCEEEEEcCCccCHHHHHhCCcc-EeeC
Q 043535 588 LKLKGHVVAVTGNGIKDAPALEEANVG-LSMG 618 (881)
Q Consensus 588 l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 618 (881)
+++.|- ++++||..+|+.+-+.||+. |.+.
T Consensus 155 ~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 155 LQDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp HHHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred HHHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 444454 99999999999999999985 4443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=92.69 E-value=0.12 Score=47.92 Aligned_cols=41 Identities=10% Similarity=-0.079 Sum_probs=35.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCCc
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDN---IFTAKAIATQCGILK 552 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~---~~~a~~ia~~~gi~~ 552 (881)
+.+++.++|++++++|++++++|||+ ...+...+++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 45789999999999999999999998 566677777888864
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=90.64 E-value=0.43 Score=49.00 Aligned_cols=116 Identities=9% Similarity=0.041 Sum_probs=62.4
Q ss_pred ccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHH--HHH-HHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHH
Q 043535 508 IKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFT--AKA-IATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLA 583 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~--a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~ 583 (881)
-...+.+++.++++.|+ +|+++ ++|+.+... +.. +....++. ..+........+ ..+-.|+-=..
T Consensus 123 ~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~---------~~f~~~~~~~~~~~~KP~p~~~~~ 191 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVV---------TFVETATQTKPVYIGKPKAIIMER 191 (264)
T ss_dssp CTTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHH---------HHHHHHHTCCCEECSTTSHHHHHH
T ss_pred CCCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHH---------HHHHHHhCCCccccCCCCHHHHHH
Confidence 34567889999999997 89997 777765421 000 00000000 001111110001 12223333333
Q ss_pred HHHHHhhcCCEEEEEcCC-ccCHHHHHhCCcc---EeeCCCCc-HHHHh---hcCeeecc
Q 043535 584 MVKCLKLKGHVVAVTGNG-IKDAPALEEANVG---LSMGIQGT-AVAKE---SSDIIILD 635 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg-~ND~~~l~~A~vg---Iam~~~~~-~~a~~---~ad~vl~~ 635 (881)
+.+.+.-..+.++||||+ .||+.|.+.||+. |..| .+. +..++ .+|+++.+
T Consensus 192 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g-~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 192 AIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSG-FTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp HHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTS-SSCSSSTTTCSSCCSEEESS
T ss_pred HHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCC-CCCHHHHHhcCCCCCEEEec
Confidence 444444335679999999 6999999999987 3334 222 23333 58998754
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=90.46 E-value=0.43 Score=54.37 Aligned_cols=97 Identities=9% Similarity=0.004 Sum_probs=59.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCC------CHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGD------NIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd------~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
++.|++.++++.|+++|+++.++|+. .......... |+.. .++.. ..++. -..+-.|+-=..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~-~fd~i~~~~~~--------~~~KP~p~~~~~ 168 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKM-HFDFLIESCQV--------GMVKPEPQIYKF 168 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHT-TSSEEEEHHHH--------TCCTTCHHHHHH
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhh-heeEEEecccc--------CCCCCCHHHHHH
Confidence 57899999999999999999999996 3222222211 2211 00000 00000 012223333344
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
+.+.+.-..+.+++|||+.||+.+-+.||+....-
T Consensus 169 ~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 169 LLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred HHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 45555544567889999999999999999986654
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=90.17 E-value=0.58 Score=44.58 Aligned_cols=31 Identities=16% Similarity=0.269 Sum_probs=23.2
Q ss_pred HHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccC
Q 043535 467 EQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKD 510 (881)
Q Consensus 467 ~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D 510 (881)
.+.+..+..+|..++.+| .|..++|++++.|
T Consensus 135 ~~~~~~~~~~G~T~v~va-------------~dg~~~g~i~l~D 165 (165)
T 2arf_A 135 SDAMTDHEMKGQTAILVA-------------IDGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHHTTTSEEEEEE-------------ETTEEEEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEE-------------ECCEEEEEEEEEC
Confidence 344556777888888877 3567999999987
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=90.06 E-value=0.27 Score=54.63 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=33.4
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCC------------HHHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDN------------IFTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~------------~~~a~~ia~~~gi~ 551 (881)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 22366778888874
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=89.75 E-value=0.52 Score=48.38 Aligned_cols=94 Identities=6% Similarity=0.042 Sum_probs=62.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc--C---------CCchhhhcCCHHHHHHHHhhheeeeccCHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQC--G---------ILKPEFRNYTEEEKMEKVEKIYVMARASPD 579 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~--g---------i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 579 (881)
++.|++.+.+++ |+++.++|..+...+..+.+.+ | +.. .++..-... .. -.+-.|+
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~-~~~~~f~~~----~~----g~KP~p~ 191 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNS-YIDGYFDIN----TS----GKKTETQ 191 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGG-GCCEEECHH----HH----CCTTCHH
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHh-hcceEEeee----cc----CCCCCHH
Confidence 578899998888 9999999999999888887776 4 211 011100000 00 1233344
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-Eee
Q 043535 580 DKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSM 617 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam 617 (881)
-=..+.+.+.-..+.+++|||+.+|+.+-++||+- |.+
T Consensus 192 ~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v 230 (253)
T 2g80_A 192 SYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLA 230 (253)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 34445555554556799999999999999999985 444
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=89.02 E-value=0.0092 Score=58.79 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=55.4
Q ss_pred CCCCccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYA-GVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
-++.|++.+.+++|+++ |+++.++|+.....+..+.+.+|+ ... +++ + +..+.+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-f~~-----------------i~~---~----~~~~~~ 126 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-VEQ-----------------HLG---P----QFVERI 126 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-HHH-----------------HHC---H----HHHTTE
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-hhh-----------------hcC---H----HHHHHc
Confidence 35789999999999999 999999999988777777777665 100 111 1 122222
Q ss_pred hhcCCEEEEEcCCccC----HHHHH-hCCcc
Q 043535 589 KLKGHVVAVTGNGIKD----APALE-EANVG 614 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND----~~~l~-~A~vg 614 (881)
.-..+.++++||+.+| +.+-+ .||+-
T Consensus 127 ~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~ 157 (193)
T 2i7d_A 127 ILTRDKTVVLGDLLIDDKDTVRGQEETPSWE 157 (193)
T ss_dssp EECSCGGGBCCSEEEESSSCCCSSCSSCSSE
T ss_pred CCCcccEEEECCchhhCcHHHhhcccccccc
Confidence 2234567899999998 66555 66654
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=84.27 E-value=0.88 Score=43.57 Aligned_cols=101 Identities=10% Similarity=0.038 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCC---CHHH---HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGD---NIFT---AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 584 (881)
++.|++.+.++.|++. +++.++|+. .... ...+.+..|.... ...+++... .|
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~---------------~~~i~~~~~--~~--- 127 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDP---------------QHFVFCGRK--NI--- 127 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCG---------------GGEEECSCG--GG---
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCc---------------ccEEEeCCc--Ce---
Confidence 5789999999999985 999999998 3211 2223333444321 011333211 11
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
. ..+++|||+.+|+. +.|+-.|++. .+... ...+++++. ++..+..++
T Consensus 128 ------l-~~~l~ieDs~~~i~--~aaG~~i~~~-~~~~~-~~~~~~~i~--~~~el~~~l 175 (180)
T 3bwv_A 128 ------I-LADYLIDDNPKQLE--IFEGKSIMFT-ASHNV-YEHRFERVS--GWRDVKNYF 175 (180)
T ss_dssp ------B-CCSEEEESCHHHHH--HCSSEEEEEC-CGGGT-TCCSSEEEC--SHHHHHHHH
T ss_pred ------e-cccEEecCCcchHH--HhCCCeEEeC-CCccc-CCCCceecC--CHHHHHHHH
Confidence 1 44689999999985 5677556664 33221 134666664 366665444
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=83.87 E-value=0.017 Score=57.09 Aligned_cols=41 Identities=12% Similarity=0.062 Sum_probs=34.2
Q ss_pred CCCccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 511 PCRPGLKKAVEDCQYA-GVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
++.|++.+.++.|+++ |+++.++|+.....+....+.+|+.
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 116 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWV 116 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchH
Confidence 5789999999999999 9999999999877666666665553
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.46 E-value=0.23 Score=48.93 Aligned_cols=91 Identities=15% Similarity=0.034 Sum_probs=64.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
.+||++.+.++.+++. +++++.|.-....|..+.+.+|+... +. ..++.......|...++.++.
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~-f~-------------~~l~rd~~~~~k~~~lK~L~~ 132 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV-FR-------------ARLFRESCVFHRGNYVKDLSR 132 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC-EE-------------EEECGGGCEEETTEEECCGGG
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc-EE-------------EEEEcccceecCCceeeeHhH
Confidence 5799999999999998 99999999999999999999998651 11 001111111123333344443
Q ss_pred c---CCEEEEEcCCccCHHHHHhCCccEe
Q 043535 591 K---GHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 591 ~---g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
- -..|++++|..++..+=+.|++-|.
T Consensus 133 Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 133 LGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp SSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred hCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 3 3468999999999988777766553
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=80.25 E-value=2.2 Score=45.98 Aligned_cols=92 Identities=12% Similarity=0.073 Sum_probs=63.9
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHH
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDN----IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPD 579 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 579 (881)
|++.-.+.+-|++.++++.|+++|++++++|+.. ...+..+.+.+|+.... ..++...++.
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~---------------~~i~ts~~~~ 86 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSP---------------LQIIQSHTPY 86 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCG---------------GGEECTTGGG
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCCh---------------hhEeehHHHH
Confidence 5555567778999999999999999999999775 44566666678986421 1145444443
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEee
Q 043535 580 DKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 617 (881)
.. .+ +.+..|.++|-. .....++.+|+-...
T Consensus 87 ~~--~~----~~~~~v~viG~~-~l~~~l~~~G~~~v~ 117 (352)
T 3kc2_A 87 KS--LV----NKYSRILAVGTP-SVRGVAEGYGFQDVV 117 (352)
T ss_dssp GG--GT----TTCSEEEEESST-THHHHHHHHTCSEEE
T ss_pred HH--HH----hcCCEEEEECCH-HHHHHHHhCCCeEec
Confidence 21 11 246789999976 566778888887653
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=80.21 E-value=0.26 Score=47.82 Aligned_cols=91 Identities=14% Similarity=0.038 Sum_probs=63.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
.+||++.+.++++.+. +++++.|.-....|..+.+.+|.... +. ..++.......|...++.++.
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~-f~-------------~~~~rd~~~~~k~~~~k~L~~ 119 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGA-FR-------------ARLFRESCVFHRGNYVKDLSR 119 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCC-EE-------------EEECGGGSEEETTEEECCGGG
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCc-EE-------------EEEeccCceecCCcEeccHHH
Confidence 4799999999999998 99999999999999999999998641 10 001111111123323333333
Q ss_pred c---CCEEEEEcCCccCHHHHHhCCccEe
Q 043535 591 K---GHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 591 ~---g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
- -..|+++||..+|..+=..+++-|.
T Consensus 120 Lg~~~~~~vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 120 LGRDLRRVLILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp TCSCGGGEEEECSCGGGGTTCTTSBCCCC
T ss_pred hCCCcceEEEEeCCHHHhccCcCCEeEec
Confidence 3 3468999999999987666666653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 881 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-34 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 8e-17 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-31 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 7e-27 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-22 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-20 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-15 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 3e-15 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 4e-15 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-04 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 135 bits (342), Expect = 2e-34
Identities = 58/280 (20%), Positives = 110/280 (39%), Gaps = 39/280 (13%)
Query: 606 PALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTI 665
P A + + + +AK+++ + + ++ GR +Y N+++FI++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 666 SVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEP 725
+V V+ FL A L L VQLLW+NL+ L A AL P ++M++PP EP
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 726 LITNVMWRNLLAQAFYQIAVLLTLL------------------------------FKGES 755
LI+ ++ +A Y A + F+G
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLD 365
Query: 756 VLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM 815
TM + V ++ N N+ + + N LG I +++ L ++
Sbjct: 366 CEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI 425
Query: 816 VEI--LKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCI 853
+ + L + L+ QW + I+ + +K I
Sbjct: 426 LYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 465
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 82.0 bits (202), Expect = 8e-17
Identities = 44/302 (14%), Positives = 82/302 (27%), Gaps = 63/302 (20%)
Query: 36 VATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCA 95
G+ + + R +G N +S + V++ F+ V IL + A
Sbjct: 12 CLAYFGVSETTGL--TPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAA 69
Query: 96 ILSLAFGLNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSN 155
+S + V IL++N
Sbjct: 70 CISFVLAW----------------------------FEEGEETITAFVEPFVILLILIAN 101
Query: 156 VVVGDVICLKIGDQVPADGIFLDGHSLQIQESDHNVEVNSSQNPFLLSGTKVVDGYGRML 215
+VG + + A + + + + Q G ++ L
Sbjct: 102 AIVGVWQERNAENAIEALKEY--------EPAATEQDKTPLQQKLDEFGEQL--SKVISL 151
Query: 216 ATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMILDLNAVV 275
G + + +A+ AV
Sbjct: 152 ICVAVWLINIGHF-----------NDPVHGGSWIRGAIYYFKIAVAL----------AVA 190
Query: 276 NLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKG 335
IPEGLP +T +A +R+ +A+VR L + ET+G A + ++ G
Sbjct: 191 --AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVG 248
Query: 336 AA 337
Sbjct: 249 EV 250
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 117 bits (295), Expect = 4e-31
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 13/162 (8%)
Query: 499 NLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE---- 554
+ DP R + +++ C+ AG+ + MITGDN TA AI + GI
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 555 --------FRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAP 606
F + E+ E + AR P K +V+ L+ + A+TG+G+ DAP
Sbjct: 68 DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAP 127
Query: 607 ALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWG 648
AL++A +G++MG GTAVAK +S++++ DDNF+T V + G
Sbjct: 128 ALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 111 bits (278), Expect = 7e-27
Identities = 37/373 (9%), Positives = 95/373 (25%), Gaps = 56/373 (15%)
Query: 305 VRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALN---TTAG 361
L +G + I + + ++ + +L G N
Sbjct: 27 YELLMDKCYLGLHSHIDWETLTDNDIQDIRN--RIFQKDKILNKLKSLGLNSNWDMLFIV 84
Query: 362 FYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVM 421
F ++ +A + + + ++ I + + +
Sbjct: 85 FSIHLIDILKKL---SHDEIEAFMY-QDEPVELKLQNISTNLADCFNLNEQLPLQFLDNV 140
Query: 422 MRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCL 481
K + + + A + H+ + + +A Q
Sbjct: 141 KVGKNNIYAAL-EEFATTEL---------------HVSDATLFSLKGALWTLAQEVYQEW 184
Query: 482 AFAHKQVPVPEEELNEENLILLGLLGIKDPC--RPGLKKAVEDCQYAGVNIKMITGDNIF 539
K E+ G + + +K + D + AG + + TG
Sbjct: 185 YLGSKLYE-DVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYT 243
Query: 540 TAKAIATQCGILKPEFRNYT--------------EEEKMEK-----VEKIYVMARASPDD 580
G+L ++ + + K +
Sbjct: 244 ETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYE 303
Query: 581 KLAMVKCLKLKGHVVAVTGNGIKDAPALEEAN---VGLSMGIQGTAVAKE----SSDIII 633
+ + V + G+ + D + ++ +G G++G A E +D +I
Sbjct: 304 SYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363
Query: 634 LDDNFATAVTLLN 646
++ +L+
Sbjct: 364 --NHLGELRGVLD 374
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 93.8 bits (232), Expect = 3e-22
Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 16/198 (8%)
Query: 329 TLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWP 388
T +Q D + P L + N + + S + + +G + E A+L
Sbjct: 19 TEDQSGATFDKRS--PTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKC- 75
Query: 389 ILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKAD-NTVHVHWKGAAEIILAMCSS 447
I + ++R + +FNS K + ++ + + + KGA E IL CSS
Sbjct: 76 IELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSS 135
Query: 448 YYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVP-----------VPEEELN 496
G L+ ++ F+ + + L F +P E
Sbjct: 136 ILVQ-GKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFP 194
Query: 497 EENLILLGLLGIKDPCRP 514
E L +GL+ + D
Sbjct: 195 TEKLCFVGLMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.4 bits (208), Expect = 6e-20
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 499 NLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY 558
+ G D + K AV++ + G+ + MITGDN +A+AI
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAI-------------- 54
Query: 559 TEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMG 618
++ V+A P K VK L+ VVA G+GI DAPAL +A++G+++G
Sbjct: 55 -----SRELNLDLVIAEVLPHQKSEEVKKLQ-AKEVVAFVGDGINDAPALAQADLGIAVG 108
Query: 619 IQGTAVAKESSDIIILDDNFATAVTLL 645
G+ VA ES DI+++ D+ V +
Sbjct: 109 -SGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 74.6 bits (182), Expect = 2e-15
Identities = 22/205 (10%), Positives = 61/205 (29%), Gaps = 9/205 (4%)
Query: 458 LEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLK 517
++ A + + G+ + +L + + L EE + + R G +
Sbjct: 25 MKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEE---ITSFVLEDAKIREGFR 81
Query: 518 KAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTE-----EEKMEKVEKIYV 572
+ V + +I+G F + + N+
Sbjct: 82 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 141
Query: 573 MARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDII 632
+ K +++ L + + G+ + D A + +++ + +E +
Sbjct: 142 CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY-LLNECREQNLNH 200
Query: 633 ILDDNFATAVTLLNWGRCVYVNIQK 657
+ +F + + V +Q
Sbjct: 201 LPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 70.5 bits (172), Expect = 3e-15
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 142 VVRNKRR--QQILLSNVVVGDVICLKIGDQVPADGIFLDGH--SLQIQESDHNVE----- 192
V R R+ Q+I ++V GD++ + +GD+VPAD L +L++ +S E
Sbjct: 5 VYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVI 64
Query: 193 -----------VNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQ 231
VN + L SGT + G + G++T G+I Q
Sbjct: 65 KHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 114
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 73.4 bits (179), Expect = 4e-15
Identities = 38/217 (17%), Positives = 68/217 (31%), Gaps = 38/217 (17%)
Query: 323 DKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEK 382
G + N + +VEL AL + + E G + E
Sbjct: 30 APEGEVLKNDKPIRSGQF---DGLVELATIC-ALCNDSSLDFNETKG--VYEKVGEATET 83
Query: 383 AILSW---------------PILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKAD 427
A+ + + + IRQ F+ RK V
Sbjct: 84 ALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKS 143
Query: 428 NTVH----VHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQ--GMAAGSLQCL 481
+ + KGA E ++ C+ + +E+ +I+ G +L+CL
Sbjct: 144 SRAAVGNKMFVKGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202
Query: 482 AFAHKQVPVPEEELN----------EENLILLGLLGI 508
A A + P EE+ E +L +G++G+
Sbjct: 203 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (113), Expect = 1e-06
Identities = 24/183 (13%), Positives = 62/183 (33%), Gaps = 10/183 (5%)
Query: 459 EVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKK 518
G + ++ + G++ A +++ + + + + + PG+++
Sbjct: 33 ICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQ---VQRLIAEQPPHLTPGIRE 89
Query: 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCG-----ILKPEFRNYTEEEKMEKVEKIYVM 573
V Q V + +I+G + +A++ + + Y E E
Sbjct: 90 LVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTA 149
Query: 574 ARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMG-IQGTAVAKESSDII 632
+ ++K ++ + G+G D A A+ + G K+++
Sbjct: 150 ESGGKGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWY 208
Query: 633 ILD 635
I D
Sbjct: 209 ITD 211
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.0 bits (95), Expect = 2e-04
Identities = 17/114 (14%), Positives = 33/114 (28%), Gaps = 3/114 (2%)
Query: 523 CQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKL 582
+ +++ + F + + P + E Y + + D K
Sbjct: 78 VDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQ--KDPKR 135
Query: 583 AMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDD 636
V K + V G+ D L EA+ G+ V +E +
Sbjct: 136 QSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHT 188
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 881 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.94 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.91 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.9 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.82 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.78 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.41 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.34 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.31 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.31 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.29 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.22 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.13 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.12 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.12 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.0 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.95 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.95 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.88 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.85 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.82 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.79 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.37 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.32 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.6 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.51 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.5 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.44 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.4 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.18 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.1 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.01 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.86 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.77 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.64 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.59 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.54 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.52 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.33 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.32 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.19 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.19 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.89 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.61 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.1 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 95.09 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.08 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.69 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.06 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.65 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 93.22 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 93.21 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 93.04 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 89.76 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 89.15 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 82.89 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.6e-41 Score=384.84 Aligned_cols=418 Identities=21% Similarity=0.230 Sum_probs=324.7
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-----
Q 043535 29 QFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL----- 103 (881)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~----- 103 (881)
|..++||++++|+||+++|||++| +++|+++||+|++++++.+++|+.++++|++|++++++++++++++.+.
T Consensus 5 h~~~~e~v~~~l~td~~~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 5 HSKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp GGSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred hhCCHHHHHHHhCcCcccCcCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 567999999999999999999988 9999999999999999999999999999999999999999999999873
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEE
Q 043535 104 ------NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFL 177 (881)
Q Consensus 104 ------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll 177 (881)
...+++.+++++++...++||.+.++.++++++.... -..||++|+|.++.
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~-----------------------~~~~~~~P~d~~l~ 139 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA-----------------------ATEQDKTPLQQKLD 139 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCC-----------------------CCCCCCCHHHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhccc-----------------------cccccCchHHHHHH
Confidence 3345555666777777888888877777776543211 14688999999876
Q ss_pred eccceeeecCCccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHH
Q 043535 178 DGHSLQIQESDHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIG 257 (881)
Q Consensus 178 ~g~~l~vdes~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~ 257 (881)
+... . . |...+.+..+|..|..|++...+.......+.++..+ .
T Consensus 140 ~~g~-------~-i------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~- 183 (472)
T d1wpga4 140 EFGE-------Q-L------------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK---------I- 183 (472)
T ss_dssp HHHH-------H-H------------------HHHHHHHHHHHHHHCCTTSSSCCSSSCSSSCGGGHHH---------H-
T ss_pred HHHH-------H-H------------------HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH---------H-
Confidence 5321 0 1 1112233445666777766555544333333332110 0
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCcc--ccccCceEE
Q 043535 258 LAITFSGLLMILDLNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTG--TLTLNQMKG 335 (881)
Q Consensus 258 l~~~~~~~~~~~~~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTG--TLT~~~m~v 335 (881)
++ .+...++|+|||++++++++++++||+|+|++||+++++|++|+..+.|+|||- |||.|
T Consensus 184 -ai------------~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n---- 246 (472)
T d1wpga4 184 -AV------------ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSN---- 246 (472)
T ss_dssp -HH------------HHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHH----
T ss_pred -HH------------HHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhh----
Confidence 01 111233999999999999999999999999999999999999999999988872 22200
Q ss_pred eecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCC
Q 043535 336 AADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHR 415 (881)
Q Consensus 336 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~ 415 (881)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccc
Q 043535 416 KQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEEL 495 (881)
Q Consensus 416 k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~ 495 (881)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec
Q 043535 496 NEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR 575 (881)
Q Consensus 496 ~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~ 575 (881)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHH
Q 043535 576 ASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655 (881)
Q Consensus 576 ~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i 655 (881)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHH
Q 043535 656 QKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNL 735 (881)
Q Consensus 656 ~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 735 (881)
+..++..+++.++..+.|+++.|++|+|+++|.+|+++++.|+|++++|++||++++++++++.++..+
T Consensus 247 -----------~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i 315 (472)
T d1wpga4 247 -----------VGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRY 315 (472)
T ss_dssp -----------HHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHH
T ss_pred -----------HHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccccCHHHHHHH
Confidence 111123334556778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCC------------------------------CcccchhHHHHHHHHHHHHhhHhhhc
Q 043535 736 LAQAFYQIAVLLTLLFKGESVLGV------------------------------NENVKDTMIFNTFVLCQVFNEFNARK 785 (881)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~t~~f~~~v~~~~~~~~~~r~ 785 (881)
+.++++.....+..+++...+... +...++|++|.+++++|+++.+++|+
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs 395 (472)
T d1wpga4 316 MAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLS 395 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999888876655444332211100 12346799999999999999999998
Q ss_pred cccccccccCcchHHHHHHHHHHHHHHHHH--HHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 786 LEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 786 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
.+...+.+++++|++++.++++++++++++ +|+++.+|++.|+++.+|+++++.+++.+++.|++|++.|
T Consensus 396 ~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R 467 (472)
T d1wpga4 396 ENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIAR 467 (472)
T ss_dssp SSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 554444458899999999998888887666 4668999999999999999999999999999999999975
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=8.6e-30 Score=246.34 Aligned_cols=140 Identities=39% Similarity=0.625 Sum_probs=132.7
Q ss_pred ccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------------hhhcCCHHHHHHHHhhheeeec
Q 043535 508 IKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------EFRNYTEEEKMEKVEKIYVMAR 575 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------~~~~~~~~~~~~~~~~~~v~~~ 575 (881)
.-||+|++++++|+.||++||+|+|+|||+..+|.++|+++||... +++.++..+..+..++..+|+|
T Consensus 17 ~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 96 (168)
T d1wpga2 17 QLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFAR 96 (168)
T ss_dssp CECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEES
T ss_pred ecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhc
Confidence 3399999999999999999999999999999999999999999754 4566777888888999999999
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHh
Q 043535 576 ASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWG 648 (881)
Q Consensus 576 ~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 648 (881)
++|+||..+++.+|++|++|+|+|||.||++||+.|||||+|+ ++++.++++||+++.++++..++++|++|
T Consensus 97 ~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999 89999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=7.9e-27 Score=216.14 Aligned_cols=127 Identities=36% Similarity=0.531 Sum_probs=112.1
Q ss_pred CceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH
Q 043535 499 NLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP 578 (881)
Q Consensus 499 ~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p 578 (881)
|.+..+.++++|++|++++++|+.|+++|++++|+|||+.++|.++|+++||.. ++++++|
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~-------------------v~~~~~p 69 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------VIAEVLP 69 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------EECSCCH
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh-------------------hccccch
Confidence 445667899999999999999999999999999999999999999999999987 9999999
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 579 DDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 579 ~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
++|.++++.+|+. +.|+|+|||.||+|||+.||+||+|+ ++++.++++||+++.++++..++++|+
T Consensus 70 ~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 70 HQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp HHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred hHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 9999999999875 58999999999999999999999999 899999999999999999999998773
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.91 E-value=1e-27 Score=265.21 Aligned_cols=306 Identities=11% Similarity=0.027 Sum_probs=213.8
Q ss_pred CchhhhhccceEEEEecCccccccCceEEeecCCC----------CChHHHHHHHHHhhhccccceeeccCCCCcceeec
Q 043535 307 KLSACETMGSATVICTDKTGTLTLNQMKGAADHSN----------IAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELS 376 (881)
Q Consensus 307 ~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (881)
-..+.|.||..+++|+|||||+|.|+|++.....+ .+.+ +++.... .+|+.+... +..
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~-~dl~~~~-~~~~~~~~~----------~~~ 96 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSN-WDMLFIV-FSIHLIDIL----------KKL 96 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCH-HHHHHHH-HHHHHHHHH----------TTS
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChh-HHHHHHH-HHHHHHHHH----------hhc
Confidence 34566999999999999999999999987554211 1111 2222222 222222111 123
Q ss_pred CChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCcee
Q 043535 377 GSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVK 456 (881)
Q Consensus 377 ~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~ 456 (881)
++|.+.+++.... ..+......++.+......||++.+++|++.....++ .+....||+++.+.
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~-~~~~~~~~a~~~~~-------------- 160 (380)
T d1qyia_ 97 SHDEIEAFMYQDE-PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNN-IYAALEEFATTELH-------------- 160 (380)
T ss_dssp CHHHHHHHHHCSS-CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHH-HHHHHHHHHHHHTT--------------
T ss_pred CCCcHHHHHHHHh-hccchHHHHHHhccccccCCcchHHHHHhhhcccccc-hhHhhhhccHhhcC--------------
Confidence 5577888877654 4444455566777888889999999999876443222 23333455554431
Q ss_pred cCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCc--cHHHHHHHHHhCCCEEEEEc
Q 043535 457 HLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRP--GLKKAVEDCQYAGVNIKMIT 534 (881)
Q Consensus 457 ~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~--~~~~~I~~l~~~Gi~v~~~T 534 (881)
+++..+..+...+.+++.+|+|++++|++..+..+. ....+....|++..+|+++| ++++++++|+++|++++|+|
T Consensus 161 -~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~-~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~T 238 (380)
T d1qyia_ 161 -VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK-KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIAT 238 (380)
T ss_dssp -CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC-SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred -CcHHHHHHHHhHHHHHHHHHHHHHHHhhhccccccc-ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEEC
Confidence 223334455667788999999999999987643221 12234456799999998555 99999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCchhhh---cCCHHHH-----------------HHHHhhheeeeccCHHHHHHHHHHHhhcCCE
Q 043535 535 GDNIFTAKAIATQCGILKPEFR---NYTEEEK-----------------MEKVEKIYVMARASPDDKLAMVKCLKLKGHV 594 (881)
Q Consensus 535 Gd~~~~a~~ia~~~gi~~~~~~---~~~~~~~-----------------~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~ 594 (881)
||+..+|..+++++|+... ++ -...++. .+.+.....++|.+|.+|..+++.++..++.
T Consensus 239 g~~~~~a~~il~~lgl~~~-F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~ 317 (380)
T d1qyia_ 239 GRPYTETVVPFENLGLLPY-FEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDD 317 (380)
T ss_dssp SSCHHHHHHHHHHHTCGGG-SCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTT
T ss_pred CCCHHHHHHHHHHcCCccc-CCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCe
Confidence 9999999999999999752 11 0111111 1223344578899999999999999999999
Q ss_pred EEEEcCCccCHHHHHhCC---ccEeeCCCCcHHHHh----hcCeeeccCCchHHHHHH
Q 043535 595 VAVTGNGIKDAPALEEAN---VGLSMGIQGTAVAKE----SSDIIILDDNFATAVTLL 645 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~---vgIam~~~~~~~a~~----~ad~vl~~~~~~~i~~~i 645 (881)
|+|+|||.||++|.|.|| |||+||..+++..++ .||+++.+ +..+.+++
T Consensus 318 ~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~--~~el~~il 373 (380)
T d1qyia_ 318 VFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH--LGELRGVL 373 (380)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS--GGGHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECC--HHHHHHHH
Confidence 999999999999999999 999999666655443 79999954 66665443
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.90 E-value=6e-24 Score=215.22 Aligned_cols=171 Identities=19% Similarity=0.214 Sum_probs=135.0
Q ss_pred ChHHHHHHHHHhhhccccceeeccCC-CCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEE
Q 043535 343 APKVVELIQQGFALNTTAGFYKRTSG-SGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVM 421 (881)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svi 421 (881)
.+...+.+..+.++|+.+.+...... ........|||+|.||+.++. +.+.+....++.++++..+||+|+||+|+++
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~-~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v 108 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIE-LSCGSVRKMRDRNPKVAEISFNSTNKYQLSI 108 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHH-HHHSCHHHHHHTSCEEEEEC------CEEEE
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHH-HhCCCHHHHHhhCcEeeeEeeCCCCCEEEEE
Confidence 34455667778888887766442211 112345689999999999998 7888999999999999999999999999999
Q ss_pred EeeCC-CCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc--------
Q 043535 422 MRKKA-DNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-------- 492 (881)
Q Consensus 422 v~~~~-~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-------- 492 (881)
++.+. ++.+++|+|||||.|+++|+++.. +|...++++..++.+.+.+++|+.+|+|||++|||+++..+
T Consensus 109 ~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~ 187 (214)
T d1q3ia_ 109 HEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFD 187 (214)
T ss_dssp EECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCC
T ss_pred EEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccC
Confidence 98754 356899999999999999998875 78899999999999999999999999999999999986422
Q ss_pred ---ccccccCceeeeeccccCCCCcc
Q 043535 493 ---EELNEENLILLGLLGIKDPCRPG 515 (881)
Q Consensus 493 ---~~~~e~~l~~lG~i~~~D~~r~~ 515 (881)
.+..|+||+|+|+++++||||++
T Consensus 188 ~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 188 TDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp TTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred hhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 34557899999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.82 E-value=7.4e-21 Score=195.78 Aligned_cols=159 Identities=19% Similarity=0.207 Sum_probs=129.1
Q ss_pred HHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChh----------------hhhhcceEEEEe
Q 043535 346 VVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDME----------------QIRQSCVILQVE 409 (881)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~----------------~~~~~~~~~~~~ 409 (881)
..+.+..+.++|+++.+...+.++ .+...|+|+|.||+.++. +.|.+.. ..++.++++..+
T Consensus 49 ~l~~ll~~~~LCn~a~l~~~~~~~--~~~~~G~pTE~ALl~~a~-k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 125 (239)
T d1wpga3 49 GLVELATICALCNDSSLDFNETKG--VYEKVGEATETALTTLVE-KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL 125 (239)
T ss_dssp HHHHHHHHHHHSCSCEEEEETTTT--EEEEESCHHHHHHHHHHH-HHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEE
T ss_pred HHHHHHHHHHhcCCCEeeecCCCC--eEEEcCCCCcHHHHHHHH-HhCCChHHhhccchhhhhccchhhhhhhCeEEEEe
Confidence 345566677888887775433332 667889999999999887 6665443 235678999999
Q ss_pred cCCCCCceEEEEEeeCCCC----eEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHH--Hhcchhhhhh
Q 043535 410 AFNSHRKQSRVMMRKKADN----TVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGM--AAGSLQCLAF 483 (881)
Q Consensus 410 ~F~s~~k~~sviv~~~~~~----~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~g~rvl~~ 483 (881)
||+|+||||+++++.++++ .+++|+|||||.|+++|+.+.. ++...++++..++.+.+.++++ +.+|+|||++
T Consensus 126 pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~ 204 (239)
T d1wpga3 126 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 204 (239)
T ss_dssp EEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred eecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEE
Confidence 9999999999999987653 3689999999999999998776 6778899999999999999987 6799999999
Q ss_pred hhccCCCCc----------ccccccCceeeeeccc
Q 043535 484 AHKQVPVPE----------EELNEENLILLGLLGI 508 (881)
Q Consensus 484 a~k~l~~~~----------~~~~e~~l~~lG~i~~ 508 (881)
|||+++... .+.+|+||+|+|++++
T Consensus 205 A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 205 ATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred EEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 999997532 2356899999999985
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.78 E-value=9.2e-20 Score=162.37 Aligned_cols=92 Identities=30% Similarity=0.472 Sum_probs=79.0
Q ss_pred ceEEEeCCEE--EEEeccccccCcEEEEcCCCeeccceeEEec--cceeeecC------CccccccC-----------CC
Q 043535 139 QVDVVRNKRR--QQILLSNVVVGDVICLKIGDQVPADGIFLDG--HSLQIQES------DHNVEVNS-----------SQ 197 (881)
Q Consensus 139 ~v~V~Rdg~~--~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g--~~l~vdes------~~~v~~~~-----------~~ 197 (881)
.++|+|+|++ ++|+++||+|||+|.|++||+|||||+|+.+ .++.+||| .| +.|.. +.
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~p-v~K~~~~~~~~~~~~~~~ 80 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS-VIKHTEPVPDPRAVNQDK 80 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSC-EECCCSCCCCTTCCGGGC
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEE-EEeecccccccccccccc
Confidence 5789999985 7899999999999999999999999999864 45789998 33 33321 24
Q ss_pred CceeecccEEeeCceeEEEEEEeccchhhHHHhh
Q 043535 198 NPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQ 231 (881)
Q Consensus 198 ~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~ 231 (881)
.|++|+||.|.+|+++++|++||.+|.+|++.++
T Consensus 81 ~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~ 114 (115)
T d1wpga1 81 KNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 114 (115)
T ss_dssp TTEECTTCEEEECEEEEEEEECGGGSHHHHHHHH
T ss_pred cceEEeccEEEeeeEEEEEEEEccccHHHHHHHh
Confidence 5789999999999999999999999999999875
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.41 E-value=4.2e-13 Score=135.88 Aligned_cols=138 Identities=16% Similarity=0.148 Sum_probs=106.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------------------------------- 553 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------- 553 (881)
.+.+.+.++|++|+++|++++++|||+...+..+++.+++..+
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 5778999999999999999999999999999999999988753
Q ss_pred ----------------hhhcCCHHHHHHHHhhhe-----------eeeccCHHHHHHHHHHHhhc----CCEEEEEcCCc
Q 043535 554 ----------------EFRNYTEEEKMEKVEKIY-----------VMARASPDDKLAMVKCLKLK----GHVVAVTGNGI 602 (881)
Q Consensus 554 ----------------~~~~~~~~~~~~~~~~~~-----------v~~~~~p~~K~~~v~~l~~~----g~~v~~iGDg~ 602 (881)
.......+...+...+.. +-.......|...++.+.++ .+.++++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000011222233222211 11222345788888887654 45689999999
Q ss_pred cCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhH
Q 043535 603 KDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGR 649 (881)
Q Consensus 603 ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR 649 (881)
||.+|++.||+||||+ |+.+.+|+.||+|+.+++.+++.+++.+..
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999998887643
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.34 E-value=2.3e-12 Score=130.34 Aligned_cols=138 Identities=16% Similarity=0.138 Sum_probs=104.5
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhh---------------hc----------------
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEF---------------RN---------------- 557 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~---------------~~---------------- 557 (881)
+.++.+++.+++++|++.|++++++|||+...+..++..+|+..+-+ ..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 45677899999999999999999999999999999999999876400 00
Q ss_pred -------------------CC---HHHHHHHHhh--hee-----eeccC--HHHHHHHHHHHhhc----CCEEEEEcCCc
Q 043535 558 -------------------YT---EEEKMEKVEK--IYV-----MARAS--PDDKLAMVKCLKLK----GHVVAVTGNGI 602 (881)
Q Consensus 558 -------------------~~---~~~~~~~~~~--~~v-----~~~~~--p~~K~~~v~~l~~~----g~~v~~iGDg~ 602 (881)
.. .+........ ..+ +.... ...|...++.+.++ ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 00 0111111111 011 11122 34788888877654 34588899999
Q ss_pred cCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 603 KDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 603 ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
||.+|++.||+||||+ |+.+.+++.||+++..++..++.+++++
T Consensus 178 nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999 9999999999999999999999988864
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.31 E-value=1.8e-12 Score=134.96 Aligned_cols=136 Identities=17% Similarity=0.202 Sum_probs=104.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------------------------------------
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------------------------------ 553 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------ 553 (881)
.++.+.+.++|++|+++|++++++|||+...+..+.+++++..+
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 35778999999999999999999999999999999999998753
Q ss_pred ------------------------------------------hhhcC-------------CHHHHHHHH-------hh-h
Q 043535 554 ------------------------------------------EFRNY-------------TEEEKMEKV-------EK-I 570 (881)
Q Consensus 554 ------------------------------------------~~~~~-------------~~~~~~~~~-------~~-~ 570 (881)
..... .++...... .+ .
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 00000 011111111 11 1
Q ss_pred ee------eeccCHH--HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCc
Q 043535 571 YV------MARASPD--DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNF 638 (881)
Q Consensus 571 ~v------~~~~~p~--~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~ 638 (881)
.+ +....|. +|+..++.+.++ ...++++|||.||.+||+.|++|+||+ |+.+.+|..||+++.+++.
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLE 258 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTT
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCc
Confidence 11 1223343 699999988875 346899999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHH
Q 043535 639 ATAVTLLN 646 (881)
Q Consensus 639 ~~i~~~i~ 646 (881)
+++.++++
T Consensus 259 ~Gv~~~l~ 266 (271)
T d1rkqa_ 259 DGVAFAIE 266 (271)
T ss_dssp THHHHHHH
T ss_pred ChHHHHHH
Confidence 99998876
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.31 E-value=2.5e-12 Score=134.83 Aligned_cols=67 Identities=22% Similarity=0.306 Sum_probs=60.7
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|+..++.+.++ .+.|+++|||.||.+||+.|+.||||+ |+.+.+++.||+++.+++.+++.++|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 699999998775 246899999999999999999999999 9999999999999999899999988864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.29 E-value=1.6e-12 Score=135.21 Aligned_cols=66 Identities=21% Similarity=0.259 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.|+..++.++++ | +.|+++|||.||.+||+.|+.|+||+ |+.+.+|+.||+|+.+++.+++.+.|+
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 599999888765 2 46899999999999999999999999 999999999999999999999998876
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.22 E-value=3.8e-12 Score=131.85 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ ...++++|||.||.+||+.||.|+||+ |+.+.+|+.||+|+.+++..++.++|++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 699999888765 457899999999999999999999999 9999999999999999999999998865
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.13 E-value=3.8e-11 Score=124.57 Aligned_cols=66 Identities=27% Similarity=0.353 Sum_probs=59.4
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.|+..++.+.++ ...|+++|||.||.+||+.||+||||+ |+.+.+|+.||+++.+++..++.++++
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 699888888765 245888999999999999999999999 999999999999999999999998775
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.12 E-value=8.5e-11 Score=113.06 Aligned_cols=101 Identities=13% Similarity=0.137 Sum_probs=85.2
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CC
Q 043535 518 KAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GH 593 (881)
Q Consensus 518 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~ 593 (881)
.+|+.+++.|+.+.++||+....+...++++++.. ++.. ..+|...++.+.++ .+
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-------------------~~~~--~~~K~~~l~~~~~~~~i~~~ 97 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------FFLG--KLEKETACFDLMKQAGVTAE 97 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------EEES--CSCHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-------------------cccc--cccHHHHHHHHHHHhcCCcc
Confidence 47999999999999999999999999999999975 4433 33455555554433 46
Q ss_pred EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH
Q 043535 594 VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT 640 (881)
Q Consensus 594 ~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 640 (881)
.|+++||+.||.+||+.|++|+||+ ++.+.+++.||+|+..+.-.+
T Consensus 98 ~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 98 QTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTT
T ss_pred eeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCc
Confidence 8999999999999999999999999 999999999999998876554
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.12 E-value=5.3e-11 Score=124.16 Aligned_cols=66 Identities=20% Similarity=0.244 Sum_probs=54.5
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCC-chHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDN-FATAVTLLN 646 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~-~~~i~~~i~ 646 (881)
.|...++.+.+. ...|+++|||.||.+||+.||+|+||+ |+.+.+|+.||+++..++ ..++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 577777777664 357999999999999999999999999 999999999999997554 445665554
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=3.1e-10 Score=113.69 Aligned_cols=122 Identities=21% Similarity=0.218 Sum_probs=90.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhh-----hcCCHHHHHHHHhhheeeeccCHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEF-----RNYTEEEKMEKVEKIYVMARASPDDKLAMV 585 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-----~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 585 (881)
+++|++.+.|+.|+++|++++++||.....+.++++.+|++.... ........ ...........+..|.+++
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~---~g~~~~~p~~~~~~K~~~v 158 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEY---AGFDETQPTAESGGKGKVI 158 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCE---EEECTTSGGGSTTHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcc---ccceeeeeeeccchHHHHH
Confidence 468999999999999999999999999999999999999975210 00000000 0000000113356799999
Q ss_pred HHHhhc--CCEEEEEcCCccCHHHHHhCCccEeeCCC-CcHHHHhhcCeeecc
Q 043535 586 KCLKLK--GHVVAVTGNGIKDAPALEEANVGLSMGIQ-GTAVAKESSDIIILD 635 (881)
Q Consensus 586 ~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIam~~~-~~~~a~~~ad~vl~~ 635 (881)
+.+++. ...++++|||.||++|++.||++||++.+ .....++.||+++.+
T Consensus 159 ~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 159 KLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp HHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred HHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 999765 34689999999999999999999999744 346778889999864
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.95 E-value=5.5e-10 Score=113.38 Aligned_cols=45 Identities=11% Similarity=0.062 Sum_probs=40.6
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP 553 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~ 553 (881)
.+...+.+.++|++++++|++++++|||+...+..+.+++++..+
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~ 59 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETP 59 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccccc
Confidence 455567899999999999999999999999999999999998754
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.95 E-value=5.4e-10 Score=113.92 Aligned_cols=132 Identities=12% Similarity=0.152 Sum_probs=96.0
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh-----------------------hh-cCC-----------
Q 043535 515 GLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-----------------------FR-NYT----------- 559 (881)
Q Consensus 515 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-----------------------~~-~~~----------- 559 (881)
+..+++.++++.|+.++++|||+...+..+.+++++..+. +. ...
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 4455677788999999999999999999999999986530 00 000
Q ss_pred -------------------------H---HHHHHHHhhhe------------eeeccCHHHHHHHHHHHhhc-C---CEE
Q 043535 560 -------------------------E---EEKMEKVEKIY------------VMARASPDDKLAMVKCLKLK-G---HVV 595 (881)
Q Consensus 560 -------------------------~---~~~~~~~~~~~------------v~~~~~p~~K~~~v~~l~~~-g---~~v 595 (881)
+ +++.+...... +-.......|...++.+.+. | ..|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0 11111111110 11112234799999988876 2 458
Q ss_pred EEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcC-------eeeccCCchHHHHHHHH
Q 043535 596 AVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSD-------IIILDDNFATAVTLLNW 647 (881)
Q Consensus 596 ~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~~ 647 (881)
+++|||.||.+||+.||.|++|+ |+.+.+++.|| ++...++..++.+++++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 88999999999999999999999 99999999988 67777778899988875
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.88 E-value=1e-09 Score=108.31 Aligned_cols=131 Identities=11% Similarity=0.185 Sum_probs=93.0
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheee--eccCHHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVM--ARASPDDKLAMVK 586 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~--~~~~p~~K~~~v~ 586 (881)
..++.+++.+.++.++..|..++++||.....+....++.+........+..+. ....... .-..+..|...+.
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 148 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD----GKLTGDVEGEVLKENAKGEILE 148 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET----TEEEEEEECSSCSTTHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccc----ccccccccccccccccccchhh
Confidence 346788999999999999999999999999999999999888752000000000 0000000 0011223334333
Q ss_pred HHh----hcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 587 CLK----LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 587 ~l~----~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
.+. -..+.++++|||.||++|++.||+|||| |+.+..++.||+++.++|+.+++++|
T Consensus 149 ~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 149 KIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred hHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 333 3355788999999999999999999999 67899999999999998998887654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.85 E-value=7.7e-09 Score=101.58 Aligned_cols=130 Identities=13% Similarity=0.088 Sum_probs=92.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
+..++....++.+ +.+.+.+++|+.............++.......+... ............+..+...++.++.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~i 143 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEID----DSDRVVGYQLRQKDPKRQSVIAFKS 143 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEEC----TTSCEEEEECCSSSHHHHHHHHHHH
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeee----cccccccccccchhhHHHHHHHhcc
Confidence 3456666666665 5789999999999999999999999876310000000 0000012233345566777888888
Q ss_pred cCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 591 KGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
..+.|+|+|||.||++||+.||+||||+ +..+..++++|+++.+ ++..+.++|..
T Consensus 144 ~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~~-~~~d~~~~~~~ 198 (206)
T d1rkua_ 144 LYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVH-TYEDLKREFLK 198 (206)
T ss_dssp TTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEEC-SHHHHHHHHHH
T ss_pred cccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceeec-CHHHHHHHHHH
Confidence 8999999999999999999999999995 6666777788888764 67778876654
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.82 E-value=1.9e-09 Score=108.30 Aligned_cols=141 Identities=10% Similarity=0.033 Sum_probs=101.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh---cCCHHHHHH--HHhhheeeeccCHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR---NYTEEEKME--KVEKIYVMARASPDDKLAMV 585 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~---~~~~~~~~~--~~~~~~v~~~~~p~~K~~~v 585 (881)
+++|++.+.++.|+++|+++.++|+.....+..+.+++|+...-.. ....+.... .........+..|+.|..++
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 154 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVI 154 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHH
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHHH
Confidence 4689999999999999999999999999999999999988642000 000000000 00000123455778899999
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhh-cCeeeccCCchHHHHHHHHhHHHHH
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKES-SDIIILDDNFATAVTLLNWGRCVYV 653 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~-ad~vl~~~~~~~i~~~i~~gR~~~~ 653 (881)
+.++..++.|+|+||+.||.+|++.||+++|++ ...+.+++. .++.. -+++..+...+++-.....
T Consensus 155 ~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 155 HELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp HHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHH
T ss_pred HHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 555555554 44433 4578888887776554443
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=1.4e-08 Score=101.61 Aligned_cols=43 Identities=7% Similarity=-0.049 Sum_probs=39.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
..+.+.+.+++++|+++|++++++|||+...+..+.+++|+..
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 3477889999999999999999999999999999999999864
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.37 E-value=4.7e-08 Score=98.20 Aligned_cols=53 Identities=19% Similarity=0.213 Sum_probs=47.0
Q ss_pred HHHHHHHHHhhc-CCEEEEEcCC----ccCHHHHHhCC-ccEeeCCCCcHHHHhhcCeee
Q 043535 580 DKLAMVKCLKLK-GHVVAVTGNG----IKDAPALEEAN-VGLSMGIQGTAVAKESSDIII 633 (881)
Q Consensus 580 ~K~~~v~~l~~~-g~~v~~iGDg----~ND~~~l~~A~-vgIam~~~~~~~a~~~ad~vl 633 (881)
.|+..++.|.+. .+.|+++||+ .||.+||+.|+ .|+||+ |+.+.+|..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 689999999775 5689999994 69999999998 699999 99999999999875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.32 E-value=2.7e-07 Score=91.71 Aligned_cols=61 Identities=15% Similarity=0.304 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 579 DDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 579 ~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
.+|+..++.+.++. .++++||+.||.+||+.|+.|+||+ +|.. +..|++.+.+ ...+.+.+
T Consensus 158 ~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEESS--HHHHHHHH
T ss_pred CCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEE-eCCC--CccCeEEcCC--HHHHHHHH
Confidence 36999999998875 5667899999999999997776665 3332 4578999864 33444433
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.60 E-value=5.7e-06 Score=82.44 Aligned_cols=50 Identities=14% Similarity=0.246 Sum_probs=36.6
Q ss_pred HHHHHHHHHhhc-CCEEEEEcC----CccCHHHHHhCC-ccEeeCCCCcHHHHhhcCe
Q 043535 580 DKLAMVKCLKLK-GHVVAVTGN----GIKDAPALEEAN-VGLSMGIQGTAVAKESSDI 631 (881)
Q Consensus 580 ~K~~~v~~l~~~-g~~v~~iGD----g~ND~~~l~~A~-vgIam~~~~~~~a~~~ad~ 631 (881)
+|+..++.+.+. .+.|+++|| |.||.+||+.|+ .|++++ + .+.+++.++.
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~-~~~~~~~~~~ 240 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-A-PEDTRRICEL 240 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-S-HHHHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-C-HHHHHHHHHH
Confidence 577777777654 568999999 789999999998 677775 4 5666665553
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.51 E-value=7.9e-05 Score=72.86 Aligned_cols=111 Identities=12% Similarity=0.158 Sum_probs=78.7
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheee------eccCHHHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVM------ARASPDDKLAMV 585 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~------~~~~p~~K~~~v 585 (881)
+.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.. .++. .+. .+-.|+-=..++
T Consensus 89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~-~F~~-------------i~~~~~~~~~Kp~~~~~~~~~ 154 (218)
T d1te2a_ 89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SFDA-------------LASAEKLPYSKPHPQVYLDCA 154 (218)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-------------EEECTTSSCCTTSTHHHHHHH
T ss_pred ccchHHHHHHHhhhccccccccccccccccccccccccccc-cccc-------------cccccccccchhhHHHHHHHH
Confidence 46999999999999999999999999999999999999964 1111 011 122233334555
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCccE-eeCC--CCcHHHHhhcCeeeccC
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANVGL-SMGI--QGTAVAKESSDIIILDD 636 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI-am~~--~~~~~a~~~ad~vl~~~ 636 (881)
+.+.-..+.+++|||+.+|+.|-+.||+.. ++.. ...+.....||+++.+-
T Consensus 155 ~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l 208 (218)
T d1te2a_ 155 AKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSL 208 (218)
T ss_dssp HHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCG
T ss_pred HHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECCh
Confidence 555555678999999999999999999853 3321 11222335688887653
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.50 E-value=5.2e-05 Score=74.36 Aligned_cols=118 Identities=19% Similarity=0.231 Sum_probs=83.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheee------eccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVM------ARASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~------~~~~p~~K~~~ 584 (881)
++.|++.+.++.|++.|+++.++|+.....+..+.+++|+... ++. .+. ....|+--..+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~-f~~-------------~~~~~~~~~~kp~p~~~~~~ 160 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL-FSE-------------MLGGQSLPEIKPHPAPFYYL 160 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-CSE-------------EECTTTSSSCTTSSHHHHHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhh-ccc-------------cccccccccccccchhhHHH
Confidence 4679999999999999999999999999999999999998751 110 011 11223444455
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCc-cEeeC--CCC-cHHHHhhcCeeeccCCchHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANV-GLSMG--IQG-TAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~--~~~-~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
.+.++-....++||||+.+|+.+-+.||+ .|.+. .+. .+.....+|+++.+ +..++++
T Consensus 161 ~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~--l~dL~~i 222 (224)
T d2hsza1 161 CGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILKI 222 (224)
T ss_dssp HHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGGG
T ss_pred HHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECC--HHHHHHh
Confidence 55555556789999999999999999997 44443 121 22344568988864 5555443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.44 E-value=0.00012 Score=72.02 Aligned_cols=119 Identities=15% Similarity=0.187 Sum_probs=79.0
Q ss_pred CCccHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec--cCHHHH----HHH
Q 043535 512 CRPGLKKAVEDCQYAG-VNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR--ASPDDK----LAM 584 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~--~~p~~K----~~~ 584 (881)
+-|++.+.+++|++.| +++.++|+.....+....+..|+... ++ ..+++. ..+..+ ...
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~-fd-------------~i~~~~~~~~~k~~p~~~~~~ 157 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY-FP-------------FGAFADDALDRNELPHIALER 157 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT-CS-------------CEECTTTCSSGGGHHHHHHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccc-cc-------------ccccccccccccchhHHHHHH
Confidence 4689999999999987 89999999999999999999999751 11 011111 011122 122
Q ss_pred HHHHhh---cCCEEEEEcCCccCHHHHHhCCcc---EeeCCCCcHH-HHhhcCeeeccCCchHHHHHHH
Q 043535 585 VKCLKL---KGHVVAVTGNGIKDAPALEEANVG---LSMGIQGTAV-AKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 585 v~~l~~---~g~~v~~iGDg~ND~~~l~~A~vg---Iam~~~~~~~-a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
++.+.. ..+.++||||+.+|+.|-+.||+. |+.|....+. .+..||+++. ++..+.+++.
T Consensus 158 ~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 158 ARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred hhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 233322 135799999999999999999954 4444333333 3346899986 4666665543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.40 E-value=2.8e-05 Score=79.56 Aligned_cols=131 Identities=11% Similarity=0.167 Sum_probs=79.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh------cCCHHHHHHHHhhheeeeccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR------NYTEEEKMEKVEKIYVMARASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~------~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 584 (881)
++|+|+.+.++.|++.|+++.++||.-...+.++++++|+..++.. ..+++.+...... --.....|...
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~----~~i~~~~K~~~ 210 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKG----ELIHVFNKHDG 210 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECS----SCCCTTCHHHH
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccC----CccccccCcch
Confidence 5899999999999999999999999999999999999999753110 0000000000000 00112234333
Q ss_pred H----HHHhh--cCCEEEEEcCCccCHHHHHhC---CccEeeCC-CCc-----HHHHhhcCeeeccCCchHHHHHH
Q 043535 585 V----KCLKL--KGHVVAVTGNGIKDAPALEEA---NVGLSMGI-QGT-----AVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 585 v----~~l~~--~g~~v~~iGDg~ND~~~l~~A---~vgIam~~-~~~-----~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
+ ...+. ....|.++|||.||..|.+.+ +.+++.|- +.. +.-.++-|+|+.++.--.++..|
T Consensus 211 ~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~i 286 (291)
T d2bdua1 211 ALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 286 (291)
T ss_dssp HHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred hhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHHHH
Confidence 2 22222 346789999999999998743 33333321 222 12236789998876555554433
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.18 E-value=0.00044 Score=69.24 Aligned_cols=99 Identities=14% Similarity=0.092 Sum_probs=69.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.++++.|+++|+++.++||.+...+..+.+..|+...-.+.. ..++ ....+-.|+.=...++.+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~--------~~~~KP~p~~~~~~~~~l~ 170 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDD--------VPAGRPYPWMCYKNAMELG 170 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGG--------SSCCTTSSHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccc--------ccccccChHHHHHHHHHhC
Confidence 578999999999999999999999999999999999988764100000 0000 0111223444455555555
Q ss_pred hc-CCEEEEEcCCccCHHHHHhCCcc-Eee
Q 043535 590 LK-GHVVAVTGNGIKDAPALEEANVG-LSM 617 (881)
Q Consensus 590 ~~-g~~v~~iGDg~ND~~~l~~A~vg-Iam 617 (881)
-. .+.++||||+.+|+.+=+.||+- |++
T Consensus 171 ~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v 200 (257)
T d1swva_ 171 VYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 200 (257)
T ss_dssp CCSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred CCCcceEEEEeCChhhHHHHHHCCCEEEEE
Confidence 43 46799999999999999999973 444
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.10 E-value=0.00021 Score=69.25 Aligned_cols=116 Identities=16% Similarity=0.120 Sum_probs=78.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc----CHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA----SPDDKLAMVK 586 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~----~p~~K~~~v~ 586 (881)
++.+++.+.++.++..| ++.++|+.....+..+.+.+|+... ++. .+.+.. .|+-...+++
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~-fd~-------------v~~~~~~~~~~p~~~~~~~~ 148 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHF-FDG-------------IYGSSPEAPHKADVIHQALQ 148 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGG-CSE-------------EEEECSSCCSHHHHHHHHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccc-ccc-------------cccccccccccccccchhhh
Confidence 46789999999999875 8999999999999999999998752 111 111222 2333333333
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHhCCc-cEee--CCCCcHHHH-hhcCeeeccCCchHHHH
Q 043535 587 CLKLKGHVVAVTGNGIKDAPALEEANV-GLSM--GIQGTAVAK-ESSDIIILDDNFATAVT 643 (881)
Q Consensus 587 ~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam--~~~~~~~a~-~~ad~vl~~~~~~~i~~ 643 (881)
.+.-..+.++||||+.||+.|-+.||+ .|++ |....+... ..+|+++.+ +..+.+
T Consensus 149 ~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~ 207 (210)
T d2ah5a1 149 THQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp HTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred hhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 333335678999999999999999998 4444 322333333 348999765 555554
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.0014 Score=61.83 Aligned_cols=133 Identities=14% Similarity=0.163 Sum_probs=75.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHH---------------HHHHHHcCCCchhhh--cCCHHHHHHHHhhheeee
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTA---------------KAIATQCGILKPEFR--NYTEEEKMEKVEKIYVMA 574 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a---------------~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~v~~ 574 (881)
+-|++.++++.|+++|++++++|..+.... .......|+...... ...++...........+.
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~r 107 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCR 107 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSS
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeeccccccccccccccccccc
Confidence 558999999999999999999999764211 011111111110000 000000000000000111
Q ss_pred ccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc--EeeC--CCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 575 RASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG--LSMG--IQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 575 ~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam~--~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.-.|.--..+++.+.-..+.+.||||..+|+.|=+.|+++ +.+. ....+.....||+++.+ +..++++|+
T Consensus 108 KP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~--l~dl~~~ik 181 (182)
T d2gmwa1 108 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLPQAIK 181 (182)
T ss_dssp TTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHHHHHH
T ss_pred CCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC--HHHHHHHhc
Confidence 2334444555666655566789999999999999999995 3333 12234556679999864 777777665
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.86 E-value=0.0021 Score=62.95 Aligned_cols=124 Identities=17% Similarity=0.198 Sum_probs=81.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.++++.|+ +|+++.++|+..........+.+|+... ++.. ..++. -..+-.|+-=..+++.+.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~-fd~i~~s~~~--------~~~KP~~~~~~~~~~~l~ 169 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL-FDSITTSEEA--------GFFKPHPRIFELALKKAG 169 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG-CSEEEEHHHH--------TBCTTSHHHHHHHHHHHT
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc-cccccccccc--------cccchhhHHHHHHHhhhc
Confidence 46799999999997 5799999999999999999999998641 1110 00000 011222322233444444
Q ss_pred hcCCEEEEEcCC-ccCHHHHHhCCccE-eeCC-CCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 590 LKGHVVAVTGNG-IKDAPALEEANVGL-SMGI-QGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 590 ~~g~~v~~iGDg-~ND~~~l~~A~vgI-am~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
-....+++|||. .+|+.+-+.||+.. .+.. .........+|+++.+ +..+.++++
T Consensus 170 ~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 227 (230)
T d1x42a1 170 VKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVD 227 (230)
T ss_dssp CCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHH
T ss_pred ccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHH
Confidence 345679999998 68999999999853 2321 2333455678998875 777777665
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.77 E-value=0.00053 Score=65.94 Aligned_cols=98 Identities=13% Similarity=0.186 Sum_probs=67.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHh-hheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVE-KIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~-~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.++++.|+++|+++.++|+... .+..+.++.|+... ++.. +. ......+-.|+--..+++.+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~-f~~i--------~~s~~~~~~Kp~~~~~~~~~~~~~ 151 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY-FTEI--------LTSQSGFVRKPSPEAATYLLDKYQ 151 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG-EEEE--------ECGGGCCCCTTSSHHHHHHHHHHT
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc-cccc--------cccccccccchhHHHHHHHHHHhC
Confidence 3579999999999999999999998765 45678888998751 1110 00 000111223444445555555
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCcc-EeeC
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVG-LSMG 618 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 618 (881)
-....++||||+.+|+.+-+.||+. |++.
T Consensus 152 ~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~ 181 (204)
T d2go7a1 152 LNSDNTYYIGDRTLDVEFAQNSGIQSINFL 181 (204)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEESS
T ss_pred CCCceEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence 5567899999999999999999985 4454
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.64 E-value=0.00043 Score=69.40 Aligned_cols=38 Identities=18% Similarity=0.208 Sum_probs=29.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ 547 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~ 547 (881)
+..-+++.++|++|+++|++++++|++...+...++++
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~ 54 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR 54 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 34448899999999999999999998775555555544
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.59 E-value=0.0028 Score=62.19 Aligned_cols=120 Identities=13% Similarity=0.110 Sum_probs=80.5
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
.-.+.|++.+.+++|+++|+++.++|+..........+.+|+..- +..... ..+.....+-.|+-=....+.+
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~-~~~~~~------~~d~~~~~KP~p~~~~~~~~~~ 197 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDI-LELVDG------HFDTKIGHKVESESYRKIADSI 197 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCC-GGGCSE------EECGGGCCTTCHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchh-hhhcce------eeccccccCCCcHHHHHHHHHh
Confidence 345789999999999999999999999999999999999987541 000000 0000011233344444555555
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCccEee----CCCCcHHHHhhcCeeecc
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVGLSM----GIQGTAVAKESSDIIILD 635 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vgIam----~~~~~~~a~~~ad~vl~~ 635 (881)
.-..+.++||||..+|+.+-+.||+.... |..........++.++.+
T Consensus 198 ~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~s 248 (253)
T d1zs9a1 198 GCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 248 (253)
T ss_dssp TSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred CCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECC
Confidence 55567899999999999999999996444 222233444566777653
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.54 E-value=0.0012 Score=61.23 Aligned_cols=92 Identities=10% Similarity=0.025 Sum_probs=64.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH--HHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNI-FTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP--DDKLAMVKC 587 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~v~~ 587 (881)
++.|++.++++.|+++|+++.++|+.+. ..+....+..++... + ..+...-.| +.-.++.+.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~-~--------------~~~~~~~kp~~~~~~~~~~~ 110 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKY-F--------------IQREIYPGSKVTHFERLHHK 110 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGG-C--------------SEEEESSSCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccc-c--------------eeeecccCCChHHHHHHHHH
Confidence 4789999999999999999999997654 556667777776531 0 012222233 333344444
Q ss_pred HhhcCCEEEEEcCCccCHHHHHhCCcc-Eee
Q 043535 588 LKLKGHVVAVTGNGIKDAPALEEANVG-LSM 617 (881)
Q Consensus 588 l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam 617 (881)
+.-..+.++||||..+|+.+-+.||+- |.+
T Consensus 111 ~~~~~~~~l~igD~~~di~aA~~aG~~~i~v 141 (164)
T d1u7pa_ 111 TGVPFSQMVFFDDENRNIIDVGRLGVTCIHI 141 (164)
T ss_dssp HCCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred hCCChHHEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 444466899999999999999999984 444
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.52 E-value=0.0041 Score=59.20 Aligned_cols=132 Identities=18% Similarity=0.298 Sum_probs=88.8
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------hhhc--CCHHH------------------HHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------EFRN--YTEEE------------------KME 565 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------~~~~--~~~~~------------------~~~ 565 (881)
+-||+.++++.+++. ...+++|-.-.+-..++|+.+|+... ++++ .+.++ +.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 468999999999987 77888888888889999999999743 2221 11111 111
Q ss_pred HHhhheeeecc------------CHHHHHHHHHHHhhc-C-CEEEEEcCCccCHHHHHhCCc--cEeeCCCCcHHHHhhc
Q 043535 566 KVEKIYVMARA------------SPDDKLAMVKCLKLK-G-HVVAVTGNGIKDAPALEEANV--GLSMGIQGTAVAKESS 629 (881)
Q Consensus 566 ~~~~~~v~~~~------------~p~~K~~~v~~l~~~-g-~~v~~iGDg~ND~~~l~~A~v--gIam~~~~~~~a~~~a 629 (881)
.+.+ +|.++ -...|..+++..-+. + ...+++||+..|..||+.|.= |+|++-||.+-+-+.|
T Consensus 161 ~~d~--~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA 238 (308)
T d1y8aa1 161 KLDE--LFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHA 238 (308)
T ss_dssp HHHH--HHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTC
T ss_pred HHHH--HhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccccc
Confidence 1111 12221 124566666554432 2 234788999999999998732 5666668899999999
Q ss_pred CeeeccCCchHHHHHHH
Q 043535 630 DIIILDDNFATAVTLLN 646 (881)
Q Consensus 630 d~vl~~~~~~~i~~~i~ 646 (881)
|+++.+.+...+..++.
T Consensus 239 ~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 239 DVVIISPTAMSEAKVIE 255 (308)
T ss_dssp SEEEECSSTHHHHHHHH
T ss_pred ceEEeccchhHHHHHHH
Confidence 99998887776665543
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.33 E-value=0.0025 Score=60.15 Aligned_cols=102 Identities=18% Similarity=0.145 Sum_probs=70.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-c------cCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-R------ASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-~------~~p~~K~~ 583 (881)
++.|++.+.+++|++.|+++.++|+.+.... ...+..|+.. .++. +++ . -.|+--..
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~-~fd~--------------i~~~~~~~~~KP~p~~~~~ 142 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAA-YFTE--------------VVTSSSGFKRKPNPESMLY 142 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGG-GEEE--------------EECGGGCCCCTTSCHHHHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccc-cccc--------------ccccccccccCCCHHHHHH
Confidence 4579999999999999999999999876554 5678888875 1211 121 1 11222233
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCe
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI 631 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~ 631 (881)
+.+.+. .+.+++|||..+|+.+-+.||+-...- ++....++..|+
T Consensus 143 ~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d~ 187 (187)
T d2fi1a1 143 LREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI 187 (187)
T ss_dssp HHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred HHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcCC
Confidence 333332 245889999999999999999975443 667777776653
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.32 E-value=7.6e-05 Score=68.37 Aligned_cols=97 Identities=11% Similarity=0.032 Sum_probs=60.6
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhh---heeee------ccCHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEK---IYVMA------RASPD 579 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~---~~v~~------~~~p~ 579 (881)
++++.|++.+.++.|+++|++++++||++......+.+.++... ... ..... ...+. |-.+.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~d~~ 104 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTR--------KWV-EDIAGVPLVMQCQREQGDTRKDDV 104 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHH--------HHH-HHTTCCCCSEEEECCTTCCSCHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHh--------hhh-hhcCCCcEEEeecccccccCCchH
Confidence 57899999999999999999999999997432211111000000 000 00000 01111 12234
Q ss_pred HHHHHHHHHhhcCC-EEEEEcCCccCHHHHHhCCcc
Q 043535 580 DKLAMVKCLKLKGH-VVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 580 ~K~~~v~~l~~~g~-~v~~iGDg~ND~~~l~~A~vg 614 (881)
-|..+.+.+...+. +++++||...|+.|.+++|+-
T Consensus 105 ~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 105 VKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp HHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred HHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 57777777766544 567889999999999999985
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.19 E-value=0.0037 Score=62.05 Aligned_cols=49 Identities=14% Similarity=0.169 Sum_probs=37.0
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCCc
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMIT---GDNIFTAKAIATQCGILK 552 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~~gi~~ 552 (881)
|++.-.+.+=+++.++|+.|+++|++++++| ++.+......-+++|+..
T Consensus 12 GTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 12 GVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred CeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 3444445555789999999999999999998 556666666667788754
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.19 E-value=0.0013 Score=63.17 Aligned_cols=119 Identities=10% Similarity=0.122 Sum_probs=78.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK 591 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 591 (881)
+.|++.+.++.|++ ++++.++|+.....+..+.++.|+... ++.... ....-...-.|+--..+++.+.-.
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~-f~~i~~-------~~~~~~~KP~p~~~~~~~~~~~~~ 153 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMR-MAVTIS-------ADDTPKRKPDPLPLLTALEKVNVA 153 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGG-EEEEEC-------GGGSSCCTTSSHHHHHHHHHTTCC
T ss_pred cccchhhhhhhhcc-ccccccccccccccccccccccccccc-cccccc-------ccccccchhhhhhhcccccceeee
Confidence 56899999999975 799999999999999999999998651 110000 000001112233334555555444
Q ss_pred CCEEEEEcCCccCHHHHHhCCccEee---CCCCcHHHHhhcCeeeccCCchHHH
Q 043535 592 GHVVAVTGNGIKDAPALEEANVGLSM---GIQGTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 592 g~~v~~iGDg~ND~~~l~~A~vgIam---~~~~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
.+.++||||+.+|+.+-+.||+.... | .......+.+|+++. ++..++
T Consensus 154 ~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 154 PQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGG
T ss_pred ccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHH
Confidence 46789999999999999999997543 3 333344556788874 354443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.89 E-value=0.0075 Score=59.29 Aligned_cols=120 Identities=13% Similarity=0.135 Sum_probs=79.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
.+.|++.++++.|++ |++++++|+.+........+++|+... ++. .+.+ +-+|+-=..+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~-fd~-------------i~~s~~~~~~KP~p~~~~~~ 173 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY-FDA-------------IVIGGEQKEEKPAPSIFYHC 173 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG-CSE-------------EEEGGGSSSCTTCHHHHHHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc-ccc-------------cccccccccchhhhhhHHHH
Confidence 367999999999985 899999999999999999999998651 111 0111 1122222334
Q ss_pred HHHHhhcCCEEEEEcCCc-cCHHHHHhCCcc-EeeC-CCC--cHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGI-KDAPALEEANVG-LSMG-IQG--TAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~-~~~--~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.+.+.-..+.++||||.. +|+.+-+.||+. +..- ..+ .......+|+++.+ +..+.++++.
T Consensus 174 ~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~--l~eL~~ll~~ 239 (247)
T d2gfha1 174 CDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALLQS 239 (247)
T ss_dssp HHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHHHH
T ss_pred HHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECC--HHHHHHHHHH
Confidence 444443455799999995 899999999996 4332 111 11223457888864 7777766653
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.61 E-value=0.018 Score=57.14 Aligned_cols=44 Identities=14% Similarity=0.046 Sum_probs=34.5
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCCc
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITG---DNIFTAKAIATQCGILK 552 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~~ 552 (881)
.+++-+++.++++.|+++|++++++|+ ++........+++|+..
T Consensus 21 ~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~ 67 (261)
T d1vjra_ 21 DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 67 (261)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CCccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccc
Confidence 344458999999999999999999984 55666666677788753
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.10 E-value=0.0059 Score=58.02 Aligned_cols=89 Identities=17% Similarity=0.242 Sum_probs=63.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH--HHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDN----IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP--DDKLAMV 585 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~v 585 (881)
+.|++.+.++.+++.|++|+.+|||. ..|+..+.+.+|+...+... .++.+-.+ ..|.+.+
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~-------------vll~~~~~~K~~rr~~I 153 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNP-------------VIFAGDKPGQNTKSQWL 153 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCC-------------CEECCCCTTCCCSHHHH
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccc-------------eEeeCCCCCchHHHHHH
Confidence 56799999999999999999999995 45666666778986532111 13433222 2344444
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCc-cEee
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANV-GLSM 617 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam 617 (881)
+ ++ ..++++||..+|..+-++|++ +|-+
T Consensus 154 k---~y-~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 154 Q---DK-NIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp H---HT-TEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred H---Hc-CeEEEecCCHHHHhHHHHcCCCceEe
Confidence 3 34 588999999999999999996 5654
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=95.09 E-value=0.0049 Score=54.95 Aligned_cols=107 Identities=14% Similarity=0.211 Sum_probs=68.5
Q ss_pred cCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCce
Q 043535 376 SGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNV 455 (881)
Q Consensus 376 ~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~ 455 (881)
+.||+.+|++++++.+.+.... ..........+|+...+..++.+ ++. .+..|++..+.+..... +.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~---~g~---~v~~G~~~~~~~~~~~~----g~- 95 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRER--DVQSLHATFVPFTAQSRMSGINI---DNR---MIRKGSVDAIRRHVEAN----GG- 95 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCC--CTTTTTCEEEEEETTTTEEEEEE---TTE---EEEEECHHHHHHHHHHH----TC-
T ss_pred CCchHHHHHHHHHHHhcCCCcc--ccccccccccccccccceEEEEE---CCE---EEEecHHHHHHHHHHHc----CC-
Confidence 4579999999998722221111 11122234566666665554433 332 34569998876654321 00
Q ss_pred ecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCC
Q 043535 456 KHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCR 513 (881)
Q Consensus 456 ~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r 513 (881)
.....+.+..+++..+|.+++.+| .|-.++|++++.|++|
T Consensus 96 -----~~~~~~~~~~~~~~~~G~Tvv~Va-------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 96 -----HFPTDVDQKVDQVARQGATPLVVV-------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp -----CCCHHHHHHHHHHHHTTSEEEEEE-------------ETTEEEEEEEEEESSC
T ss_pred -----CCcHHHHHHHHHHHHCCCeEEEEE-------------ECCEEEEEEEEEeecC
Confidence 113456778899999999999998 4678999999999986
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.08 E-value=0.011 Score=58.63 Aligned_cols=57 Identities=16% Similarity=0.153 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCcc-CHHHHHhCCc-cEeeCCCC---cHHHHhh---cCeeecc
Q 043535 578 PDDKLAMVKCLKLKGHVVAVTGNGIK-DAPALEEANV-GLSMGIQG---TAVAKES---SDIIILD 635 (881)
Q Consensus 578 p~~K~~~v~~l~~~g~~v~~iGDg~N-D~~~l~~A~v-gIam~~~~---~~~a~~~---ad~vl~~ 635 (881)
|+--..+.+.+.-..+.++||||..+ |+.+-++||+ +|.+. .| .+..... .|+++.+
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~-~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT-TGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES-SSSSCTTTGGGCSSCCSEEESC
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC-CCCCCHHHHhhcCCCCCEEECC
Confidence 44444555555555678999999966 9999999999 67664 22 2222222 3888764
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.69 E-value=0.02 Score=54.71 Aligned_cols=122 Identities=8% Similarity=0.089 Sum_probs=81.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhh-heeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEK-IYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~-~~v~~~~~p~~K~~~v~~l~ 589 (881)
.+.+++.++++.+++.|+++.++|+-.........+..++... ++.. +.. ..-..+-.|+-=..+.+.+.
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~-fd~~--------~~s~~~~~~KP~p~~~~~~~~~~g 163 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG-FDHL--------LSVDPVQVYKPDNRVYELAEQALG 163 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-CSEE--------EESGGGTCCTTSHHHHHHHHHHHT
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccc-ccce--------eeeeeeeccccHHHHHHHHHHHhC
Confidence 4568899999999999999999999999999999888887642 1100 000 00011222333334455555
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEe-eC--CCCcHHHHhhcCeeeccCCchHHHH
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLS-MG--IQGTAVAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIa-m~--~~~~~~a~~~ad~vl~~~~~~~i~~ 643 (881)
-..+.+++|||..+|+.+-+.||+-.. +. +...+.....+|+++. ++..+.+
T Consensus 164 ~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~ 218 (220)
T d1zrna_ 164 LDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVE 218 (220)
T ss_dssp SCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHT
T ss_pred CCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHh
Confidence 455679999999999999999998744 32 1222333455799875 3666554
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.06 E-value=0.025 Score=54.19 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=56.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC--------HHHH-------HHHHHHcCCCchhhh--cCCHHHHHHHHhhheee
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN--------IFTA-------KAIATQCGILKPEFR--NYTEEEKMEKVEKIYVM 573 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~--------~~~a-------~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~v~ 573 (881)
.+-|++.++|++|+++|+++.++|... ...+ ....++.|+.-..+. ...+........+...+
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPM 127 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTT
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccccccccccccc
Confidence 367999999999999999999999532 1111 111222222110000 00000000000000000
Q ss_pred eccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCc-cEeeC
Q 043535 574 ARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANV-GLSMG 618 (881)
Q Consensus 574 ~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~ 618 (881)
-.-.|.--.++.+.+.-....+.||||..+|+.|=+.|++ +|.+.
T Consensus 128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred ccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 0122333344445554445678999999999999999999 45553
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.65 E-value=0.026 Score=54.08 Aligned_cols=111 Identities=10% Similarity=0.164 Sum_probs=69.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
.++-|++.+.++.|++.|+++.++|+... +....+..|+... ++.. ..+ .....+-.|+-=..+.+.+
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~-f~~i~~~~--------~~~~~KP~~~~~~~~l~~~ 158 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGY-FDAIADPA--------EVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGG-CSEECCTT--------TSSSCTTSTHHHHHHHHHT
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccc-cccccccc--------cccccccChHHHHHHHHHc
Confidence 34678999999999999999999999865 4667788888652 1100 000 0011112222222333333
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCc-cEeeCCCCcHHHHhhcCeeec
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANV-GLSMGIQGTAVAKESSDIIIL 634 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a~~~ad~vl~ 634 (881)
.-..+.++||||+.+|+.+-+.||+ .|+++ . ......++.++.
T Consensus 159 ~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~--~~~~~~~~~~~~ 202 (221)
T d1o08a_ 159 GVAPSESIGLEDSQAGIQAIKDSGALPIGVG-R--PEDLGDDIVIVP 202 (221)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEES-C--HHHHCSSSEEES
T ss_pred CCCCceEEEEecCHHHHHHHHHcCCEEEEEC-C--hhhcccccEEcC
Confidence 3335578999999999999999998 45555 3 223334555544
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.22 E-value=0.097 Score=49.81 Aligned_cols=122 Identities=11% Similarity=0.111 Sum_probs=75.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC--CHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY--TEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~--~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
.+.+++.+.+++++.. ..++|+.....+..+.+++|+... +... ..+... .-.++-.|+-=....+.+
T Consensus 85 ~~~~g~~~~L~~l~~~---~~i~t~~~~~~~~~~l~~~~l~~~-f~~~~~~~~~~~------~~~~KP~~~~~~~~~~~l 154 (222)
T d2fdra1 85 KIIDGVKFALSRLTTP---RCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAKDLG------ADRVKPKPDIFLHGAAQF 154 (222)
T ss_dssp CBCTTHHHHHHHCCSC---EEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHHHHC------TTCCTTSSHHHHHHHHHH
T ss_pred chhhhHHHHhhhcccc---ceeeeecchhhhhhhhcccccccc-cceeeccccccc------ccccccCHHHHHHHHHhh
Confidence 4678888888877654 578999999999999999999862 1110 000000 000111222223444444
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCc-------HH-HHhhcCeeeccCCchHHHHHH
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGT-------AV-AKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~-------~~-a~~~ad~vl~~~~~~~i~~~i 645 (881)
.-..+.+++|||+.+|+.+=+.||+- |++. .+. +. ...-||+++.+ +..+..++
T Consensus 155 ~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll 217 (222)
T d2fdra1 155 GVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI 217 (222)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred CCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEECC--HHHHHHHH
Confidence 44456899999999999999999973 4454 221 11 22348999875 55555444
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.21 E-value=0.058 Score=51.32 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=66.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN----IFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMV 585 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v 585 (881)
.+.+++.+.+++|+++|+++.++|+.. ...........|+... ++.. ..++ .-...-.|+--....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~-fd~i~~s~~--------~~~~KP~p~~~~~~~ 167 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH-FDFLIESCQ--------VGMIKPEPQIYNFLL 167 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG-CSEEEEHHH--------HSCCTTCHHHHHHHH
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh-hceeeehhh--------ccCCCCChHHHHHHH
Confidence 367999999999999999999999632 2233334444444321 0000 0000 011233455555666
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCc-cEeeCCCCcHHH
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANV-GLSMGIQGTAVA 625 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~~~~~~~a 625 (881)
+.++-..+.++||||..+|+.+-+.||+ +|.+. ++.+..
T Consensus 168 ~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~~ 207 (222)
T d1cr6a1 168 DTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTASAL 207 (222)
T ss_dssp HHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHHH
T ss_pred HHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-CcchHH
Confidence 6666667789999999999999999998 55554 554443
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=93.04 E-value=0.02 Score=52.36 Aligned_cols=92 Identities=17% Similarity=0.162 Sum_probs=54.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC--------HHHHH-------HHHHHcCCCchhhhcCCHHHHHHHHhhheeee-
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN--------IFTAK-------AIATQCGILKPEFRNYTEEEKMEKVEKIYVMA- 574 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~--------~~~a~-------~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~- 574 (881)
.+-|++.++++.|+++|++++++|..+ ..... ......|+... ...+|
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~----------------~i~~~~ 93 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD----------------EVLICP 93 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEE----------------EEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccc----------------eeeecc
Confidence 356899999999999999999999753 11111 11222222110 00121
Q ss_pred ----------ccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeC
Q 043535 575 ----------RASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMG 618 (881)
Q Consensus 575 ----------~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 618 (881)
.-.|+-=.++++.+.-..+.+.||||...|..|=+.||+- |.++
T Consensus 94 ~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~ 148 (161)
T d2fpwa1 94 HLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 148 (161)
T ss_dssp CCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred ccccccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEEC
Confidence 1123222334444443455789999999999999999995 4443
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.76 E-value=0.034 Score=52.89 Aligned_cols=93 Identities=10% Similarity=0.107 Sum_probs=58.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH----HHcCCCchhhhcCCHHHHHHHHhhheeee-------ccCHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIA----TQCGILKPEFRNYTEEEKMEKVEKIYVMA-------RASPD 579 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia----~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-------~~~p~ 579 (881)
.+.+++.+.+++|++.|++++++|+.......... ...++.. .++ .+++ .-.|+
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~-~fd--------------~i~~s~~~~~~KP~~~ 163 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM-HFD--------------FLIESCQVGMVKPEPQ 163 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT-TSS--------------EEEEHHHHTCCTTCHH
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHh-hcc--------------EEEeccccccchhHHH
Confidence 36789999999999999999999975433222111 1112111 000 0111 22333
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCc-cEeeC
Q 043535 580 DKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANV-GLSMG 618 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~ 618 (881)
-=..+++.+.-....++||||...|+.+-++||+ +|.+.
T Consensus 164 ~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 164 IYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 3344455555445678899999999999999999 56664
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=89.15 E-value=0.89 Score=43.19 Aligned_cols=89 Identities=10% Similarity=0.133 Sum_probs=63.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~ 583 (881)
.++-+++.+++++|+ |+++.++|..+...+....+..|+... ++. .+.+ +-.|+-=..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~-fd~-------------v~~s~~~~~~KP~p~~f~~ 155 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS-FDA-------------VISVDAKRVFKPHPDSYAL 155 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG-CSE-------------EEEGGGGTCCTTSHHHHHH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc-ccc-------------ccccccccccCccHHHHHH
Confidence 356788999999886 688999999999999998888888652 110 1111 222332234
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
+++.+.-..+.+++|||+.+|+.+=+.||+.
T Consensus 156 a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 156 VEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp HHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 4455544456799999999999999999974
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=82.89 E-value=0.13 Score=47.25 Aligned_cols=93 Identities=5% Similarity=0.119 Sum_probs=58.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc-CCCchhhhcCCHHHHHHHHhhheee-------eccCHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQC-GILKPEFRNYTEEEKMEKVEKIYVM-------ARASPDDKL 582 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~v~-------~~~~p~~K~ 582 (881)
++.+++.+.+..+++.|+++.++|+-+...+...-.+. |+ ...... ++ ..-.|+-=.
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l-------------~~~fd~--v~~s~~~~~~Kp~~~~~~ 148 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEI-------------RDAADH--IYLSQDLGMRKPEARIYQ 148 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHH-------------HHHCSE--EEEHHHHTCCTTCHHHHH
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccc-------------hhhccc--eeecccccccccchHHHH
Confidence 46789999999999999999999986554332221111 11 111111 11 122333323
Q ss_pred HHHHHHhhcCCEEEEEcCCccCHHHHHhCCc-cEeeC
Q 043535 583 AMVKCLKLKGHVVAVTGNGIKDAPALEEANV-GLSMG 618 (881)
Q Consensus 583 ~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~ 618 (881)
.+.+.+.-..+.+++|||..+|+.+-+.||+ +|.+.
T Consensus 149 ~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 149 HVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred HHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 4444444445679999999999999999998 56665
|